F299603

General Info

Members Datasets Scaffolds Average Seq Length
195 93 390 384

Family's Representative Sequence

Representative Sequence 3300005330|Ga0070690_100073528|Ga0070690_1000735283
Length 407
Sequence VSAVPDTSTIRAFLDERHVALAGEAARFAAERVAPLPEPAGDPGAREQARSLLGLLGEEGWLGYAVPEVWGGHWPEPDLRACCLIREALAAASPLADAVFALQCLGSMPITLAGSEAQRSRWLPAVARGQAMAAFAMTEPEAGSDVSSMATVAVRTPEEGGGYVLDGQKTFISNAGIADFHVVFAATDREARSRGLSCFLVEAETPGLSFLGPQVLSAPHPLGEIGFSGCRVPEESRIGPEGEGFKLGMRTLDRLRPTVAAAACGMAGRALAEATAHARRRRQFGKALADFQIVQEKLAIMATDLAAARLLVYRAAWEGDTGTRAEADRRSLAAAMAKAFATEAAQRIVDSALQILGGRGALAENPVERLYRSVRALRIYEGTTEIQHLIIARHLLRETTEEAKAPG

Samples

Sample ID Description Type Environment
1 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
2 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
3 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
4 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
5 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
6 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
7 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
8 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
9 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
10 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
11 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
12 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
16 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
17 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
18 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
19 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
20 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
21 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
24 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
25 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
26 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
27 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
28 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
29 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
30 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
31 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
32 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
34 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
35 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
37 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
38 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
39 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
54 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
55 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
56 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
57 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
58 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
59 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
60 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
61 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
62 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
63 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
64 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
65 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
66 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
67 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
68 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
69 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
70 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
71 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
72 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
73 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
74 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
75 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
76 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
77 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
78 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
79 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
80 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
81 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
82 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
83 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
84 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
85 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
86 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
87 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
88 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
89 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
90 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
91 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
92 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
93 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.51
Rhizosphere 99.49
Stem 0
Stem Tuber 0
Unclassified 1.54

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070690_100073528 3300005330 Bacteria 2224
2 Ga0068868_100176513 3300005338 Bacteria 1771
3 Ga0070689_100000065 3300005340 Bacteria 62971
4 Ga0070689_100013536 3300005340 Bacteria 5905
5 Ga0070689_100079454 3300005340 Bacteria 2573
6 Ga0070688_100000001 3300005365 Bacteria 106331
7 Ga0070688_100001057 3300005365 Bacteria 13847
8 Ga0070688_100016852 3300005365 Bacteria 4184
9 Ga0070688_100117572 3300005365 Bacteria 1776
10 Ga0070703_10002297 3300005406 Bacteria 5529
11 Ga0070711_100056615 3300005439 Bacteria 2712
12 Ga0070705_100008277 3300005440 Bacteria 5149
13 Ga0070694_100000006 3300005444 Bacteria 100858
14 Ga0070694_100004428 3300005444 Bacteria 8449
15 Ga0070694_100065138 3300005444 Bacteria 2496
16 Ga0070708_100039077 3300005445 Bacteria 4150
17 Ga0070708_100047979 3300005445 Bacteria 3774
18 Ga0068867_100027767 3300005459 Bacteria 4071
19 Ga0068867_100210569 3300005459 Unclassified 1561
20 Ga0070685_10002120 3300005466 Bacteria 10247
21 Ga0070685_10031667 3300005466 Bacteria 2957
22 Ga0070706_100055727 3300005467 Bacteria 3649
23 Ga0070707_100065134 3300005468 Bacteria 3500
24 Ga0070707_100065915 3300005468 Bacteria 3480
25 Ga0070707_100100321 3300005468 Bacteria 2805
26 Ga0070707_100109739 3300005468 Bacteria 2676
27 Ga0070707_100156467 3300005468 Bacteria 2220
28 Ga0070698_100072591 3300005471 Bacteria 3450
29 Ga0070698_100163800 3300005471 Bacteria 2167
30 Ga0070698_100186251 3300005471 Bacteria 2014
31 Ga0070699_100005049 3300005518 Bacteria 11615
32 Ga0070697_100001243 3300005536 Bacteria 19278
33 Ga0070697_100111062 3300005536 Bacteria 2285
34 Ga0070686_100052686 3300005544 Bacteria 2596
35 Ga0070686_100079753 3300005544 Bacteria 2164
36 Ga0070695_100022700 3300005545 Bacteria 3851
37 Ga0070695_100059898 3300005545 Bacteria 2467
38 Ga0070695_100162818 3300005545 Bacteria 1567
39 Ga0070696_100000408 3300005546 Bacteria 26747
40 Ga0070696_100027197 3300005546 Bacteria 3895
41 Ga0070696_100192606 3300005546 Unclassified 1518
42 Ga0070704_100013008 3300005549 Bacteria 5151
43 Ga0070704_100020602 3300005549 Bacteria 4256
44 Ga0070704_100035173 3300005549 Bacteria 3404
45 Ga0070704_100046957 3300005549 Bacteria 3015
46 Ga0070704_100274217 3300005549 Bacteria 1395
47 Ga0070664_100150195 3300005564 Bacteria 2056
48 Ga0068859_100001677 3300005617 Bacteria 22553
49 Ga0068859_100046955 3300005617 Bacteria 4337
50 Ga0068859_100065740 3300005617 Bacteria 3660
51 Ga0068864_100040968 3300005618 Bacteria 3961
52 Ga0068870_10024291 3300005840 Bacteria 2998
53 Ga0075428_100015171 3300006844 Bacteria 8546
54 Ga0075428_100021332 3300006844 Bacteria 7172
55 Ga0075428_100071250 3300006844 Bacteria 3799
56 Ga0075428_100150637 3300006844 Bacteria 2527
57 Ga0075430_100124569 3300006846 Bacteria 2148
58 Ga0075431_100005891 3300006847 Bacteria 12127
59 Ga0075431_100152900 3300006847 Bacteria 2375
60 Ga0075433_10000091 3300006852 Bacteria 42110
61 Ga0075433_10000099 3300006852 Bacteria 41634
62 Ga0075433_10006352 3300006852 Bacteria 9342
63 Ga0075433_10024168 3300006852 Bacteria 5125
64 Ga0075433_10045571 3300006852 Bacteria 3812
65 Ga0075433_10085168 3300006852 Bacteria 2790
66 Ga0075434_100000745 3300006871 Bacteria 25571
67 Ga0075434_100000883 3300006871 Bacteria 23997
68 Ga0075434_100001827 3300006871 Bacteria 18379
69 Ga0075434_100003252 3300006871 Bacteria 14513
70 Ga0075434_100026495 3300006871 Bacteria 5680
71 Ga0075434_100028634 3300006871 Bacteria 5476
72 Ga0075434_100090584 3300006871 Bacteria 3060
73 Ga0075434_100223362 3300006871 Bacteria 1903
74 Ga0075434_100323285 3300006871 Bacteria 1563
75 Ga0075429_100014188 3300006880 Bacteria 6906
76 Ga0075429_100059303 3300006880 Bacteria 3333
77 Ga0075429_100109490 3300006880 Bacteria 2415
78 Ga0075429_100239863 3300006880 Bacteria 1588
79 Ga0075436_100002039 3300006914 Bacteria 13928
80 Ga0097620_100001677 3300006931 Bacteria 22553
81 Ga0097620_100046955 3300006931 Bacteria 4337
82 Ga0097620_100065737 3300006931 Bacteria 3660
83 Ga0075435_100012858 3300007076 Bacteria 6207
84 Ga0075435_100058920 3300007076 Bacteria 3111
85 Ga0075435_100123889 3300007076 Bacteria 2158
86 Ga0099794_10000290 3300007265 Bacteria 17274
87 Ga0099794_10004513 3300007265 Bacteria 5482
88 Ga0111539_10021195 3300009094 Bacteria 8003
89 Ga0111539_10206320 3300009094 Bacteria 2290
90 Ga0105248_10000791 3300009177 Bacteria 35518
91 Ga0163163_10022239 3300014325 Bacteria 5999
92 Ga0163163_10044570 3300014325 Bacteria 4352
93 Ga0157379_10010159 3300014968 Bacteria 8202
94 Ga0157379_10161137 3300014968 Bacteria 2025
95 Ga0207653_10001903 3300025885 Bacteria 6680
96 Ga0207684_10045758 3300025910 Bacteria 3711
97 Ga0207662_10000462 3300025918 Bacteria 18090
98 Ga0207646_10010123 3300025922 Bacteria 9242
99 Ga0207646_10054934 3300025922 Bacteria 3562
100 Ga0207670_10000012 3300025936 Bacteria 246808
101 Ga0207665_10002540 3300025939 Bacteria 12273
102 Ga0207661_10191853 3300025944 Bacteria 1792
103 Ga0207651_10105170 3300025960 Bacteria 2105
104 Ga0207703_10000603 3300026035 Bacteria 36484
105 Ga0207708_10037409 3300026075 Bacteria 3697
106 Ga0207708_10119919 3300026075 Bacteria 2049
107 Ga0207648_10028218 3300026089 Bacteria 4978
108 Ga0207648_10116633 3300026089 Bacteria 2347
109 Ga0207676_10005607 3300026095 Bacteria 8882
110 Ga0207676_10143866 3300026095 Bacteria 2045
111 Ga0207675_100030873 3300026118 Bacteria 4990
112 Ga0207675_100139393 3300026118 Unclassified 2303
113 Ga0207675_100208529 3300026118 Bacteria 1879
114 Ga0209588_1000785 3300027671 Bacteria 8054
115 Ga0209588_1000970 3300027671 Bacteria 7356
116 Ga0209998_10008805 3300027717 Bacteria 2090
117 Ga0207428_10034395 3300027907 Bacteria 4153
118 Ga0307408_100034058 3300031548 Bacteria 3564
119 Ga0373937_0085541 3300036401 Bacteria 2918
120 Ga0451577_0004660 3300042876 Bacteria 14400
121 Ga0453683_0004217 3300044673 Bacteria 10278
122 Ga0453683_0037191 3300044673 Bacteria 3063
123 Ga0453684_0245385 3300044712 Bacteria 2060
124 Ga0453684_0278140 3300044712 Bacteria 1910
125 Ga0451576_0021773 3300045051 Bacteria 6958
126 Ga0451576_0025348 3300045051 Bacteria 6389
127 Ga0451576_0043640 3300045051 Bacteria 4730
128 Ga0451576_0099782 3300045051 Bacteria 3020
129 Ga0451576_0119934 3300045051 Bacteria 2738
130 Ga0451576_0122982 3300045051 Bacteria 2702
131 Ga0451576_0138604 3300045051 Bacteria 2537
132 Ga0495603_0142475 3300046455 Bacteria 1394
133 Ga0495582_0010430 3300046473 Bacteria 5112
134 Ga0495659_0000802 3300046664 Bacteria 11247
135 Ga0495658_0028969 3300046683 Bacteria 2992
136 Ga0495676_0076225 3300047321 Bacteria 2561
137 Ga0496102_0375327 3300048905 Bacteria 1338
138 Ga0501031_0131004 3300049568 Bacteria 1638
139 Ga0501033_0087178 3300049570 Bacteria 2285
140 Ga0501040_0047874 3300049576 Bacteria 2920
141 Ga0501041_0057470 3300049577 Bacteria 2379
142 Ga0501046_0053984 3300049580 Bacteria 3163
143 Ga0501071_0070067 3300049587 Bacteria 2554
144 Ga0501072_0057458 3300049588 Bacteria 3066
145 Ga0501074_0032697 3300049590 Bacteria 3768
146 Ga0501076_0086367 3300049592 Bacteria 2521
147 Ga0501076_0303945 3300049592 Bacteria 1308
148 Ga0501081_0018165 3300049743 Bacteria 4667
149 Ga0501081_0028877 3300049743 Bacteria 3746
150 Ga0501081_0153527 3300049743 Bacteria 1655
151 Ga0501045_0013348 3300049824 Bacteria 5801
152 Ga0501045_0063223 3300049824 Bacteria 2716
153 nmdc:mga05p37_77158_c1 3300050507 Bacteria 4102
154 nmdc:mga05p37_95547_c1 3300050507 Bacteria 3661
155 nmdc:mga09592_217824_c1 3300050508 Bacteria 1654
156 nmdc:mga09592_28467_c1 3300050508 Bacteria 4642
157 nmdc:mga09592_8781_c1 3300050508 Bacteria 8223
158 nmdc:mga0qj67_78079_c1 3300050509 Bacteria 2649
159 nmdc:mga06r32_3594_c1 3300050510 Bacteria 13836
160 nmdc:mga06r32_83828_c1 3300050510 Bacteria 3106
161 nmdc:mga08y16_120755_c1 3300050511 Bacteria 2727
162 nmdc:mga08y16_21378_c1 3300050511 Bacteria 6834
163 nmdc:mga08y16_323419_c1 3300050511 Bacteria 1587
164 nmdc:mga08y16_333273_c1 3300050511 Bacteria 1561
165 nmdc:mga0n895_108896_c1 3300050512 Bacteria 2786
166 nmdc:mga0n895_150845_c1 3300050512 Bacteria 2355
167 nmdc:mga0n895_164522_c1 3300050512 Bacteria 2250
168 nmdc:mga0n895_174721_c1 3300050512 Bacteria 2179
169 nmdc:mga0n895_1997_c1 3300050512 Bacteria 15659
170 nmdc:mga0n895_236_c1 3300050512 Bacteria 35107
171 nmdc:mga0n895_28644_c1 3300050512 Bacteria 5301
172 nmdc:mga0n895_3990_c1 3300050512 Bacteria 11996
173 nmdc:mga0n895_4285_c1 3300050512 Bacteria 11681
174 nmdc:mga0n895_982_c1 3300050512 Bacteria 20646
175 nmdc:mga0rr50_115531_c1 3300050513 Bacteria 2130
176 nmdc:mga0rr50_16912_c1 3300050513 Bacteria 4857
177 nmdc:mga0rr50_638_c1 3300050513 Bacteria 18840
178 nmdc:mga0rr50_74143_c1 3300050513 Bacteria 2604
179 nmdc:mga08x19_142103_c1 3300050514 Bacteria 1622
180 nmdc:mga08x19_5409_c1 3300050514 Bacteria 7552
181 nmdc:mga0a205_118949_c1 3300050515 Bacteria 2541
182 nmdc:mga0a205_14277_c1 3300050515 Bacteria 7406
183 nmdc:mga0a205_144748_c1 3300050515 Bacteria 2277
184 nmdc:mga0a205_18_c2 3300050515 Bacteria 96859
185 nmdc:mga0a205_3287_c1 3300050515 Bacteria 14380
186 nmdc:mga0a205_4720_c1 3300050515 Bacteria 12233
187 nmdc:mga0a205_511_c1 3300050515 Bacteria 30432
188 nmdc:mga0a205_51610_c1 3300050515 Bacteria 3970
189 Ga0495601_0082172 3300053077 Bacteria 2068
190 Ga0501084_0144698 3300054114 Bacteria 2002
191 Ga0590071_000153 3300059421 Bacteria 19734
192 Ga0590075_000949 3300059424 Bacteria 7539
193 Ga0590077_000051 3300059426 Bacteria 27843
194 Ga0501082_0018901 3300060353 Bacteria 5937
195 Ga0530510_0124735 3300061734 Bacteria 1892
196 Ga0070690_100073528
197 Ga0068868_100176513
198 Ga0070689_100000065
199 Ga0070689_100013536
200 Ga0070689_100079454
201 Ga0070688_100000001
202 Ga0070688_100001057
203 Ga0070688_100016852
204 Ga0070688_100117572
205 Ga0070703_10002297
206 Ga0070711_100056615
207 Ga0070705_100008277
208 Ga0070694_100000006
209 Ga0070694_100004428
210 Ga0070694_100065138
211 Ga0070708_100039077
212 Ga0070708_100047979
213 Ga0068867_100027767
214 Ga0068867_100210569
215 Ga0070685_10002120
216 Ga0070685_10031667
217 Ga0070706_100055727
218 Ga0070707_100065134
219 Ga0070707_100065915
220 Ga0070707_100100321
221 Ga0070707_100109739
222 Ga0070707_100156467
223 Ga0070698_100072591
224 Ga0070698_100163800
225 Ga0070698_100186251
226 Ga0070699_100005049
227 Ga0070697_100001243
228 Ga0070697_100111062
229 Ga0070686_100052686
230 Ga0070686_100079753
231 Ga0070695_100022700
232 Ga0070695_100059898
233 Ga0070695_100162818
234 Ga0070696_100000408
235 Ga0070696_100027197
236 Ga0070696_100192606
237 Ga0070704_100013008
238 Ga0070704_100020602
239 Ga0070704_100035173
240 Ga0070704_100046957
241 Ga0070704_100274217
242 Ga0070664_100150195
243 Ga0068859_100001677
244 Ga0068859_100046955
245 Ga0068859_100065740
246 Ga0068864_100040968
247 Ga0068870_10024291
248 Ga0075428_100015171
249 Ga0075428_100021332
250 Ga0075428_100071250
251 Ga0075428_100150637
252 Ga0075430_100124569
253 Ga0075431_100005891
254 Ga0075431_100152900
255 Ga0075433_10000091
256 Ga0075433_10000099
257 Ga0075433_10006352
258 Ga0075433_10024168
259 Ga0075433_10045571
260 Ga0075433_10085168
261 Ga0075434_100000745
262 Ga0075434_100000883
263 Ga0075434_100001827
264 Ga0075434_100003252
265 Ga0075434_100026495
266 Ga0075434_100028634
267 Ga0075434_100090584
268 Ga0075434_100223362
269 Ga0075434_100323285
270 Ga0075429_100014188
271 Ga0075429_100059303
272 Ga0075429_100109490
273 Ga0075429_100239863
274 Ga0075436_100002039
275 Ga0097620_100001677
276 Ga0097620_100046955
277 Ga0097620_100065737
278 Ga0075435_100012858
279 Ga0075435_100058920
280 Ga0075435_100123889
281 Ga0099794_10000290
282 Ga0099794_10004513
283 Ga0111539_10021195
284 Ga0111539_10206320
285 Ga0105248_10000791
286 Ga0163163_10022239
287 Ga0163163_10044570
288 Ga0157379_10010159
289 Ga0157379_10161137
290 Ga0207653_10001903
291 Ga0207684_10045758
292 Ga0207662_10000462
293 Ga0207646_10010123
294 Ga0207646_10054934
295 Ga0207670_10000012
296 Ga0207665_10002540
297 Ga0207661_10191853
298 Ga0207651_10105170
299 Ga0207703_10000603
300 Ga0207708_10037409
301 Ga0207708_10119919
302 Ga0207648_10028218
303 Ga0207648_10116633
304 Ga0207676_10005607
305 Ga0207676_10143866
306 Ga0207675_100030873
307 Ga0207675_100139393
308 Ga0207675_100208529
309 Ga0209588_1000785
310 Ga0209588_1000970
311 Ga0209998_10008805
312 Ga0207428_10034395
313 Ga0307408_100034058
314 Ga0373937_0085541
315 Ga0451577_0004660
316 Ga0453683_0004217
317 Ga0453683_0037191
318 Ga0453684_0245385
319 Ga0453684_0278140
320 Ga0451576_0021773
321 Ga0451576_0025348
322 Ga0451576_0043640
323 Ga0451576_0099782
324 Ga0451576_0119934
325 Ga0451576_0122982
326 Ga0451576_0138604
327 Ga0495603_0142475
328 Ga0495582_0010430
329 Ga0495659_0000802
330 Ga0495658_0028969
331 Ga0495676_0076225
332 Ga0496102_0375327
333 Ga0501031_0131004
334 Ga0501033_0087178
335 Ga0501040_0047874
336 Ga0501041_0057470
337 Ga0501046_0053984
338 Ga0501071_0070067
339 Ga0501072_0057458
340 Ga0501074_0032697
341 Ga0501076_0086367
342 Ga0501076_0303945
343 Ga0501081_0018165
344 Ga0501081_0028877
345 Ga0501081_0153527
346 Ga0501045_0013348
347 Ga0501045_0063223
348 nmdc:mga05p37_77158_c1
349 nmdc:mga05p37_95547_c1
350 nmdc:mga09592_217824_c1
351 nmdc:mga09592_28467_c1
352 nmdc:mga09592_8781_c1
353 nmdc:mga0qj67_78079_c1
354 nmdc:mga06r32_3594_c1
355 nmdc:mga06r32_83828_c1
356 nmdc:mga08y16_120755_c1
357 nmdc:mga08y16_21378_c1
358 nmdc:mga08y16_323419_c1
359 nmdc:mga08y16_333273_c1
360 nmdc:mga0n895_108896_c1
361 nmdc:mga0n895_150845_c1
362 nmdc:mga0n895_164522_c1
363 nmdc:mga0n895_174721_c1
364 nmdc:mga0n895_1997_c1
365 nmdc:mga0n895_236_c1
366 nmdc:mga0n895_28644_c1
367 nmdc:mga0n895_3990_c1
368 nmdc:mga0n895_4285_c1
369 nmdc:mga0n895_982_c1
370 nmdc:mga0rr50_115531_c1
371 nmdc:mga0rr50_16912_c1
372 nmdc:mga0rr50_638_c1
373 nmdc:mga0rr50_74143_c1
374 nmdc:mga08x19_142103_c1
375 nmdc:mga08x19_5409_c1
376 nmdc:mga0a205_118949_c1
377 nmdc:mga0a205_14277_c1
378 nmdc:mga0a205_144748_c1
379 nmdc:mga0a205_18_c2
380 nmdc:mga0a205_3287_c1
381 nmdc:mga0a205_4720_c1
382 nmdc:mga0a205_511_c1
383 nmdc:mga0a205_51610_c1
384 Ga0495601_0082172
385 Ga0501084_0144698
386 Ga0590071_000153
387 Ga0590075_000949
388 Ga0590077_000051
389 Ga0501082_0018901
390 Ga0530510_0124735

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00441

Acyl-CoA_dh_1

Acyl-CoA dehydrogenase, C-terminal domain

242

396

0.99

PF08028

Acyl-CoA_dh_2

Acyl-CoA dehydrogenase, C-terminal domain

258

385

0.93

PF02771

Acyl-CoA_dh_N

Acyl-CoA dehydrogenase, N-terminal domain

15

130

0.88

PF02770

Acyl-CoA_dh_M

Acyl-CoA dehydrogenase, middle domain

134

230

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
5idu-assembly1.cif.gz_B crystal structure of an acyl-coa dehydrogenase domain protein from burkholderia phymatum bound to fad 0.9636 6 401
5jsc-assembly1.cif.gz_A-2 crystal structure of a putative acyl-coa dehydrogenase from burkholderia xenovorans 0.9615 6 403
5jsc-assembly1.cif.gz_C crystal structure of a putative acyl-coa dehydrogenase from burkholderia xenovorans 0.9583 6 403
5idu-assembly1.cif.gz_B crystal structure of an acyl-coa dehydrogenase domain protein from burkholderia phymatum bound to fad 0.9563 6 401
5jsc-assembly1.cif.gz_D crystal structure of a putative acyl-coa dehydrogenase from burkholderia xenovorans 0.9527 6 403
ID Description Score Start End Superfamily
3pfdC03 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9706 245 395 1.20.140.10
1ukwB03 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9661 241 396 1.20.140.10
af_Q22347_263_410_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.964 249 399 1.20.140.10
af_A0A0K3AQR2_269_362_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9634 249 341 1.20.140.10
1bucB03 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9634 253 396 1.20.140.10
ID Description Score Start End GO Terms
AF-A0A6N8V5M1-F1-model_v4 Acyl-CoA dehydrogenase 0.9773 175 397 GO:0003995
AF-A0A2N0QJJ7-F1-model_v4 Acyl-CoA dehydrogenase NM domain-like protein 0.9702 78 322 GO:0003995
GO:0050660
AF-A0A658JC77-F1-model_v4 deleted 0.9676 134 396
AF-A0A3A4ZV21-F1-model_v4 Medium-chain specific acyl-CoA dehydrogenase, mitochondrial 0.9658 6 404 GO:0003995
GO:0005737
GO:0033539
GO:0050660
AF-A0A444SLN4-F1-model_v4 deleted 0.9632 143 401

Map