F299386

General Info

Members Datasets Scaffolds Average Seq Length
194 143 388 408

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2775506925|2776376148
Length 442
Sequence ESTITGKVSGDQLREQVRDAARRAKRAAAELAQATRGTKDALLHAMAEALMQRAPEILAANDRDVAAGRESGMPEGLIDRLSLSTERIAAMGDGLRTVAGLPDPVGEVVRGGVLPNGLQLQQVRVPLGVVGIVYEGRPNVTVDAAGLTLKAGNAVLLRGSSSAENSNTALVSILADVIREHGLPADAVQLLPCHDRASVQHLITARGLVDVVIPRGGAGLISAVVEQATVPAIETGVGNCHVYVDASADIDTALRILLNSKARRPSVCNAAETVLVHKNIAAEFLPRALVELHGAGVTVHGDERVVAEGGANIVPATDEDWDTEFLSLDIAAAVVDSLPDAVEHIRTHGSGHTEAIVTSDVRAARQFTAQVDAAAVMVNASTAFTDGGEFGMGAEIGISTQKLHARGPMGLPELTSTKWLAFGDGHVRPGSAPVSTSPGAGS

Samples

Sample ID Description Type Environment
1 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
2 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
3 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
4 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
5 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
6 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
7 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
8 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
9 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
10 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
11 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
12 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
13 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
14 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
15 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
16 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
17 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
18 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
19 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
20 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
27 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
28 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
29 3300030736 Rhizosphere soil microbial communities in healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 6 Metagenome Rhizosphere
30 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
31 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
32 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
33 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
34 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
35 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
36 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
37 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
38 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
39 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
40 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
41 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
42 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
43 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
44 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
45 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
46 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
47 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
48 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
49 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
50 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
51 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
52 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
53 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
54 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
55 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
56 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
57 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
58 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
59 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
60 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
61 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
62 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
63 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
64 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
65 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
66 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
67 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
68 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
69 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
70 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
71 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
72 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
73 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
74 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
75 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
76 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
77 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
78 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
79 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
80 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
81 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
82 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
83 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
84 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
85 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
86 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
87 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
88 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
89 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
90 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
92 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
95 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
97 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
98 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
99 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
100 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
101 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
102 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
103 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
104 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
105 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
106 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
107 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
108 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
109 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
110 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
111 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
112 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
113 2775506925 Saccharopolyspora phatthalungensis NRRL B-24798 Isolate Rhizosphere
114 2558860280 Kutzneria sp. 744 Isolate Unclassified
115 2565956761 Rhodococcus qingshengii BKS 20-40 Isolate Rhizosphere
116 2738541308 Rhodococcus sp. OK551 Isolate Unclassified
117 2738541356 Mycobacterium sp. OK887 Isolate Unclassified
118 2738543005 Rhodococcus sp. OK519 Isolate Unclassified
119 2738543011 Rhodococcus sp. OK611 Isolate Unclassified
120 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
121 2863067949 Saccharopolyspora phatthalungensis DSM 45584 (Annotation) (version 2) Isolate Rhizosphere
122 2866552031 Saccharopolyspora rhizosphaerae H219 Isolate Unclassified
123 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
124 2870782633 Pseudonocardia eucalypti DSM 45351 Isolate Unclassified
125 2889300758 Rhodococcus sp. PvR099 Isolate Rhizosphere
126 2904535858 Rhodococcus erythropolis 2017 Isolate Unclassified
127 2904765812 Rhodococcus fascians 1590 Isolate Rhizosphere
128 2904770941 Rhodococcus fascians 1339 Isolate Rhizosphere
129 2908811453 Rhodococcus sp. 1R11 Isolate Unclassified
130 2919420072 Rhodococcus fascians 3241 Isolate Rhizosphere
131 2919432681 Rhodococcus sp. 3258 Isolate Rhizosphere
132 2919713450 Nocardia kruczakiae 4272 Isolate Rhizosphere
133 2922554459 Rhodococcus sp. 66b Isolate Unclassified
134 2928142448 Prescottella equi DPS 2018 Isolate Unclassified
135 2929212328 Mycolicibacterium sp. R-73050 Hybrid assembly Isolate Unclassified
136 2939743619 Rhodococcus sp. PvR044 Isolate Rhizosphere
137 2956939328 Lolliginicoccus suaedae LNNU 331112 Isolate Rhizosphere
138 2974315732 Rhodococcus sp. SORGH_AS 301 Isolate Unclassified
139 2984523437 Rhodococcus sp. SORGH_AS303 Isolate Aerial Root
140 2990044586 Streptomyces sedi JCM 16909 Isolate Unclassified
141 3001119090 Lolliginicoccus lacisalsi G463 Isolate Rhizosphere
142 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
143 8056207758 Saccharopolyspora indica KCTC 29208 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 84.02
Metatranscriptomes 0
Isolates 15.98

Biome Distribution

Category Percentage (%)
Aerial Root 0.52
Bulb 0
Endosphere 3.61
Nodule 0
Rhizoplane 19.59
Rhizosphere 57.22
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055540_1000167 3300003792 Bacteria 65548
2 Ga0070682_100101271 3300005337 Bacteria 1902
3 Ga0070667_100002579 3300005367 Bacteria 15736
4 Ga0070714_100002776 3300005435 Bacteria 12906
5 Ga0070714_100025594 3300005435 Bacteria 4870
6 Ga0070713_100058327 3300005436 Bacteria 3219
7 Ga0070710_10000239 3300005437 Bacteria 25832
8 Ga0068853_100015283 3300005539 Bacteria 6308
9 Ga0068856_100003871 3300005614 Bacteria 15025
10 Ga0081455_10043043 3300005937 Bacteria 3955
11 Ga0070717_10001770 3300006028 Bacteria 15056
12 Ga0075364_10019448 3300006051 Bacteria 4262
13 Ga0075370_10078202 3300006353 Bacteria 1899
14 Ga0075436_100000770 3300006914 Bacteria 21247
15 Ga0075436_100005678 3300006914 Bacteria 8564
16 Ga0105243_10002099 3300009148 Bacteria 16854
17 Ga0105248_10175170 3300009177 Bacteria 2418
18 Ga0157376_10041550 3300014969 Bacteria 3765
19 Ga0213876_10011350 3300021384 Bacteria 4759
20 Ga0213875_10033124 3300021388 Bacteria 2440
21 Ga0209051_1000048 3300025303 Bacteria 292755
22 Ga0207692_10001862 3300025898 Bacteria 8026
23 Ga0207692_10031631 3300025898 Bacteria 2536
24 Ga0207664_10003926 3300025929 Bacteria 9997
25 Ga0207664_10124634 3300025929 Bacteria 2161
26 Ga0207709_10001263 3300025935 Bacteria 18132
27 Ga0207665_10002774 3300025939 Bacteria 11737
28 Ga0207711_10149196 3300025941 Bacteria 2109
29 Ga0207658_10001674 3300025986 Bacteria 16876
30 Ga0307511_10002575 3300030521 Bacteria 18942
31 Ga0316177_1026659 3300030731 Bacteria 4633
32 Ga0316176_1201266 3300030732 Bacteria 4004
33 Ga0316180_1133201 3300030736 Bacteria 2233
34 Ga0265327_10001744 3300031251 Bacteria 25752
35 Ga0307411_10007560 3300032005 Bacteria 5550
36 Ga0316585_10008703 3300032137 Bacteria 2949
37 Ga0373956_0000255 3300035119 Bacteria 21213
38 Ga0316574_0026001 3300035398 Bacteria 3519
39 Ga0373935_0010188 3300035692 Bacteria 5631
40 Ga0373935_0173580 3300035692 Bacteria 1476
41 Ga0373927_0008808 3300035695 Bacteria 6781
42 Ga0373927_0020340 3300035695 Bacteria 4353
43 Ga0373927_0121164 3300035695 Bacteria 1707
44 Ga0373947_0012378 3300035725 Bacteria 4889
45 Ga0373925_0013746 3300037068 Bacteria 5859
46 Ga0436364_0624575 3300037853 Bacteria 32024
47 Ga0436364_1221061 3300037853 Bacteria 6909
48 Ga0436365_1019798 3300039437 Bacteria 10966
49 Ga0436365_1603395 3300039437 Bacteria 4028
50 Ga0436360_0362692 3300039438 Bacteria 1421
51 Ga0436363_0804957 3300039450 Bacteria 2504
52 Ga0451793_0230721 3300041452 Bacteria 4847
53 Ga0451833_0270173 3300041491 Bacteria 19681
54 Ga0451841_0001933 3300041498 Bacteria 1609
55 Ga0451853_0804300 3300041512 Bacteria 5465
56 Ga0439448_0008917 3300042005 Bacteria 2945
57 Ga0466969_0003424 3300044656 Bacteria 8438
58 Ga0466965_0023374 3300044683 Bacteria 2985
59 Ga0466965_0029318 3300044683 Bacteria 2678
60 Ga0466966_0005408 3300044684 Bacteria 8393
61 Ga0466961_0002288 3300044693 Bacteria 11897
62 Ga0466961_0005208 3300044693 Bacteria 8184
63 Ga0466961_0091525 3300044693 Bacteria 1920
64 Ga0453684_0059622 3300044712 Bacteria 4918
65 Ga0466968_0011763 3300044735 Bacteria 3413
66 Ga0466970_0003944 3300044765 Bacteria 7271
67 Ga0466970_0024508 3300044765 Bacteria 3155
68 Ga0466957_0013885 3300044842 Bacteria 4682
69 Ga0466960_0010892 3300044901 Bacteria 3786
70 Ga0466959_0046265 3300045049 Bacteria 3202
71 Ga0466958_0004156 3300045836 Bacteria 7604
72 Ga0466958_0026736 3300045836 Bacteria 3411
73 Ga0466958_0082762 3300045836 Bacteria 1977
74 Ga0466967_0006349 3300045976 Bacteria 8349
75 Ga0466967_0012734 3300045976 Bacteria 6457
76 Ga0466967_0027443 3300045976 Bacteria 4737
77 Ga0466967_0136902 3300045976 Bacteria 2278
78 Ga0495580_0011858 3300046472 Bacteria 6721
79 Ga0495580_0167995 3300046472 Bacteria 1517
80 Ga0495582_0000143 3300046473 Bacteria 38449
81 Ga0495665_0010742 3300046531 Bacteria 4960
82 Ga0495665_0012899 3300046531 Bacteria 4522
83 Ga0495665_0055834 3300046531 Bacteria 2085
84 Ga0495640_0174401 3300046533 Bacteria 1373
85 Ga0495668_0000043 3300046616 Bacteria 227636
86 Ga0495674_0113606 3300047319 Bacteria 2294
87 Ga0496100_0000152 3300048903 Bacteria 38556
88 Ga0496100_0013962 3300048903 Bacteria 4650
89 Ga0496100_0146089 3300048903 Bacteria 1682
90 Ga0496101_0000199 3300048904 Bacteria 46269
91 Ga0496101_0083655 3300048904 Bacteria 2363
92 Ga0496102_0207921 3300048905 Bacteria 1845
93 Ga0496102_0410198 3300048905 Bacteria 1273
94 Ga0496103_0001325 3300048906 Bacteria 16789
95 Ga0496104_0019120 3300048907 Bacteria 6262
96 Ga0496104_0039486 3300048907 Bacteria 4419
97 Ga0496104_0092261 3300048907 Bacteria 2896
98 Ga0496105_0022761 3300048908 Bacteria 5077
99 Ga0496105_0147435 3300048908 Bacteria 1935
100 Ga0496106_0011184 3300048909 Bacteria 6640
101 Ga0496106_0013676 3300048909 Bacteria 5993
102 Ga0496107_0000123 3300048910 Bacteria 38013
103 Ga0496107_0009517 3300048910 Bacteria 6742
104 Ga0496108_0002309 3300048911 Bacteria 15270
105 Ga0496108_0011408 3300048911 Bacteria 7222
106 Ga0496109_0000197 3300048912 Bacteria 59860
107 Ga0496109_0004026 3300048912 Bacteria 12274
108 Ga0496109_0226293 3300048912 Bacteria 1759
109 Ga0496110_0009749 3300048913 Bacteria 7779
110 Ga0496110_0039289 3300048913 Bacteria 4120
111 Ga0496110_0108335 3300048913 Bacteria 2494
112 Ga0496111_0000422 3300048914 Bacteria 21352
113 Ga0496111_0002669 3300048914 Bacteria 10830
114 Ga0496113_0048049 3300048916 Bacteria 3174
115 Ga0496114_0000982 3300048917 Bacteria 21345
116 Ga0496114_0006697 3300048917 Bacteria 9076
117 Ga0496114_0012418 3300048917 Bacteria 6816
118 Ga0496114_0042434 3300048917 Bacteria 3771
119 Ga0496114_0047978 3300048917 Bacteria 3552
120 Ga0496114_0088428 3300048917 Bacteria 2628
121 Ga0496115_0009002 3300048918 Bacteria 7406
122 Ga0496115_0067771 3300048918 Bacteria 2887
123 Ga0496115_0069286 3300048918 Bacteria 2857
124 Ga0496117_0015857 3300048920 Bacteria 6391
125 Ga0496118_0008927 3300048921 Bacteria 10232
126 Ga0496119_0003927 3300048922 Bacteria 15078
127 Ga0496121_0000027 3300048924 Bacteria 444747
128 Ga0496122_0000833 3300048925 Bacteria 58438
129 Ga0496123_0020223 3300048926 Bacteria 5214
130 Ga0496124_0000016 3300048927 Bacteria 444747
131 Ga0496125_0000008 3300048928 Bacteria 704677
132 Ga0496125_0116935 3300048928 Bacteria 1913
133 Ga0496126_0000025 3300048929 Bacteria 444747
134 Ga0496126_0003268 3300048929 Bacteria 20690
135 Ga0501032_0009075 3300049569 Bacteria 7221
136 Ga0501032_0028973 3300049569 Bacteria 3801
137 Ga0501033_0025802 3300049570 Bacteria 4426
138 Ga0501034_0007008 3300049571 Bacteria 12035
139 Ga0501034_0030775 3300049571 Bacteria 5454
140 Ga0501037_0000641 3300049573 Bacteria 27083
141 Ga0501037_0012991 3300049573 Bacteria 6138
142 Ga0501038_0006837 3300049574 Bacteria 10535
143 Ga0501043_0000201 3300049579 Bacteria 54503
144 Ga0501043_0030873 3300049579 Bacteria 4214
145 Ga0501046_0004310 3300049580 Bacteria 12948
146 Ga0501047_0007870 3300049581 Bacteria 10046
147 Ga0501048_0010126 3300049582 Bacteria 7051
148 Ga0501070_0000899 3300049586 Bacteria 27097
149 Ga0501071_0146716 3300049587 Bacteria 1759
150 Ga0501073_0157346 3300049589 Bacteria 1574
151 Ga0501080_0339088 3300049742 Bacteria 1358
152 Ga0501035_0015663 3300049822 Bacteria 6997
153 Ga0501044_0017709 3300049823 Bacteria 7641
154 Ga0501044_0110649 3300049823 Bacteria 2755
155 nmdc:mga00v17_5323_c1 3300050491 Bacteria 6777
156 nmdc:mga06r32_280_c4 3300050510 Bacteria 18036
157 nmdc:mga0n895_3746_c1 3300050512 Bacteria 12305
158 nmdc:mga08x19_6368_c1 3300050514 Bacteria 6989
159 nmdc:mga08x19_7591_c1 3300050514 Bacteria 6442
160 nmdc:mga0a205_37799_c1 3300050515 Bacteria 4642
161 nmdc:mga0sz30_42048_c1 3300050516 Bacteria 1922
162 Ga0495655_0044711 3300053083 Bacteria 1147
163 Ga0500616_0020521 3300053153 Bacteria 3710
164 2776376148 2775506925 Bacteria 7237746
165 2559425970 2558860280 Bacteria 11429938
166 2566994046 2565956761 Bacteria 6601618
167 2738889613 2738541308 Bacteria 7020677
168 2739145267 2738541356 Bacteria 5935017
169 2739203390 2738543005 Bacteria 5278128
170 2739237281 2738543011 Bacteria 5731169
171 2753070505 2751185734 Bacteria 8863695
172 2863068525 2863067949 Bacteria 8541735
173 2866556097 2866552031 Bacteria 5824618
174 2870729659 2870721527 Bacteria 9689237
175 2870790923 2870782633 Bacteria 9624083
176 2889302422 2889300758 Bacteria 5690814
177 2904539814 2904535858 Bacteria 6308016
178 2904769540 2904765812 Bacteria 5369154
179 2904773106 2904770941 Bacteria 5580202
180 2908814062 2908811453 Bacteria 5478616
181 2919422537 2919420072 Bacteria 5390363
182 2919435210 2919432681 Bacteria 5390474
183 2919715678 2919713450 Bacteria 7431245
184 2922560383 2922554459 Bacteria 6683962
185 2928146257 2928142448 Bacteria 5288925
186 2929216545 2929212328 Bacteria 7708288
187 2939748883 2939743619 Bacteria 5762299
188 2956941851 2956939328 Bacteria 3474458
189 2974316887 2974315732 Bacteria 4602776
190 2984525070 2984523437 Bacteria 4508481
191 2990046450 2990044586 Bacteria 6603797
192 3001119208 3001119090 Bacteria 3449530
193 8047711510 8047710418 Bacteria 11023148
194 8056215730 8056207758 Bacteria 8639239
195 Ga0055540_1000167
196 Ga0070682_100101271
197 Ga0070667_100002579
198 Ga0070714_100002776
199 Ga0070714_100025594
200 Ga0070713_100058327
201 Ga0070710_10000239
202 Ga0068853_100015283
203 Ga0068856_100003871
204 Ga0081455_10043043
205 Ga0070717_10001770
206 Ga0075364_10019448
207 Ga0075370_10078202
208 Ga0075436_100000770
209 Ga0075436_100005678
210 Ga0105243_10002099
211 Ga0105248_10175170
212 Ga0157376_10041550
213 Ga0213876_10011350
214 Ga0213875_10033124
215 Ga0209051_1000048
216 Ga0207692_10001862
217 Ga0207692_10031631
218 Ga0207664_10003926
219 Ga0207664_10124634
220 Ga0207709_10001263
221 Ga0207665_10002774
222 Ga0207711_10149196
223 Ga0207658_10001674
224 Ga0307511_10002575
225 Ga0316177_1026659
226 Ga0316176_1201266
227 Ga0316180_1133201
228 Ga0265327_10001744
229 Ga0307411_10007560
230 Ga0316585_10008703
231 Ga0373956_0000255
232 Ga0316574_0026001
233 Ga0373935_0010188
234 Ga0373935_0173580
235 Ga0373927_0008808
236 Ga0373927_0020340
237 Ga0373927_0121164
238 Ga0373947_0012378
239 Ga0373925_0013746
240 Ga0436364_0624575
241 Ga0436364_1221061
242 Ga0436365_1019798
243 Ga0436365_1603395
244 Ga0436360_0362692
245 Ga0436363_0804957
246 Ga0451793_0230721
247 Ga0451833_0270173
248 Ga0451841_0001933
249 Ga0451853_0804300
250 Ga0439448_0008917
251 Ga0466969_0003424
252 Ga0466965_0023374
253 Ga0466965_0029318
254 Ga0466966_0005408
255 Ga0466961_0002288
256 Ga0466961_0005208
257 Ga0466961_0091525
258 Ga0453684_0059622
259 Ga0466968_0011763
260 Ga0466970_0003944
261 Ga0466970_0024508
262 Ga0466957_0013885
263 Ga0466960_0010892
264 Ga0466959_0046265
265 Ga0466958_0004156
266 Ga0466958_0026736
267 Ga0466958_0082762
268 Ga0466967_0006349
269 Ga0466967_0012734
270 Ga0466967_0027443
271 Ga0466967_0136902
272 Ga0495580_0011858
273 Ga0495580_0167995
274 Ga0495582_0000143
275 Ga0495665_0010742
276 Ga0495665_0012899
277 Ga0495665_0055834
278 Ga0495640_0174401
279 Ga0495668_0000043
280 Ga0495674_0113606
281 Ga0496100_0000152
282 Ga0496100_0013962
283 Ga0496100_0146089
284 Ga0496101_0000199
285 Ga0496101_0083655
286 Ga0496102_0207921
287 Ga0496102_0410198
288 Ga0496103_0001325
289 Ga0496104_0019120
290 Ga0496104_0039486
291 Ga0496104_0092261
292 Ga0496105_0022761
293 Ga0496105_0147435
294 Ga0496106_0011184
295 Ga0496106_0013676
296 Ga0496107_0000123
297 Ga0496107_0009517
298 Ga0496108_0002309
299 Ga0496108_0011408
300 Ga0496109_0000197
301 Ga0496109_0004026
302 Ga0496109_0226293
303 Ga0496110_0009749
304 Ga0496110_0039289
305 Ga0496110_0108335
306 Ga0496111_0000422
307 Ga0496111_0002669
308 Ga0496113_0048049
309 Ga0496114_0000982
310 Ga0496114_0006697
311 Ga0496114_0012418
312 Ga0496114_0042434
313 Ga0496114_0047978
314 Ga0496114_0088428
315 Ga0496115_0009002
316 Ga0496115_0067771
317 Ga0496115_0069286
318 Ga0496117_0015857
319 Ga0496118_0008927
320 Ga0496119_0003927
321 Ga0496121_0000027
322 Ga0496122_0000833
323 Ga0496123_0020223
324 Ga0496124_0000016
325 Ga0496125_0000008
326 Ga0496125_0116935
327 Ga0496126_0000025
328 Ga0496126_0003268
329 Ga0501032_0009075
330 Ga0501032_0028973
331 Ga0501033_0025802
332 Ga0501034_0007008
333 Ga0501034_0030775
334 Ga0501037_0000641
335 Ga0501037_0012991
336 Ga0501038_0006837
337 Ga0501043_0000201
338 Ga0501043_0030873
339 Ga0501046_0004310
340 Ga0501047_0007870
341 Ga0501048_0010126
342 Ga0501070_0000899
343 Ga0501071_0146716
344 Ga0501073_0157346
345 Ga0501080_0339088
346 Ga0501035_0015663
347 Ga0501044_0017709
348 Ga0501044_0110649
349 nmdc:mga00v17_5323_c1
350 nmdc:mga06r32_280_c4
351 nmdc:mga0n895_3746_c1
352 nmdc:mga08x19_6368_c1
353 nmdc:mga08x19_7591_c1
354 nmdc:mga0a205_37799_c1
355 nmdc:mga0sz30_42048_c1
356 Ga0495655_0044711
357 Ga0500616_0020521
358 2776376148
359 2559425970
360 2566994046
361 2738889613
362 2739145267
363 2739203390
364 2739237281
365 2753070505
366 2863068525
367 2866556097
368 2870729659
369 2870790923
370 2889302422
371 2904539814
372 2904769540
373 2904773106
374 2908814062
375 2919422537
376 2919435210
377 2919715678
378 2922560383
379 2928146257
380 2929216545
381 2939748883
382 2956941851
383 2974316887
384 2984525070
385 2990046450
386 3001119208
387 8047711510
388 8056215730

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00171

Aldedh

Aldehyde dehydrogenase family

2

305

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
1o20-assembly1.cif.gz_A crystal structure of gamma-glutamyl phosphate reductase (tm0293) from thermotoga maritima at 2.00 a resolution 0.8825 15 386
4ghk-assembly2.cif.gz_A x-ray crystal structure of gamma-glutamyl phosphate reductase from burkholderia thailandensis 0.8713 13 386
4ghk-assembly2.cif.gz_B x-ray crystal structure of gamma-glutamyl phosphate reductase from burkholderia thailandensis 0.8541 11 386
2h5g-assembly2.cif.gz_B crystal structure of human pyrroline-5-carboxylate synthetase 0.8462 15 385
1o20-assembly1.cif.gz_A crystal structure of gamma-glutamyl phosphate reductase (tm0293) from thermotoga maritima at 2.00 a resolution 0.8458 15 386
ID Description Score Start End Superfamily
af_P9WHV1_235_371_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 1.003 208 342 3.40.605.10
1o20A02 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.986 208 342 3.40.309.10
af_Q9UT44_226_381_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.9837 208 342 3.40.605.10
af_Q5ADR2_223_384_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.9814 209 342 3.40.605.10
af_P9WHV1_235_371_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.9811 208 342 3.40.605.10
ID Description Score Start End GO Terms
AF-A0A5R2N266-F1-model_v4 Gamma-glutamyl-phosphate reductase (EC 1.2.1.41) 0.9904 208 342 GO:0004350
GO:0006561
AF-A0A6I4XVS8-F1-model_v4 Gamma-glutamyl-phosphate reductase (EC 1.2.1.41) 0.9751 170 345 GO:0004350
GO:0006561
AF-A0A6B3HM56-F1-model_v4 Aldehyde dehydrogenase family protein 0.9718 145 293 GO:0004350
AF-A0A7R9A1A1-F1-model_v4 Uncharacterized protein 0.9689 145 327 GO:0004350
AF-X1RSK3-F1-model_v4 Aldehyde dehydrogenase domain-containing protein 0.9679 199 345 GO:0004350
GO:0006561

Map