F299241

General Info

Members Datasets Scaffolds Average Seq Length
194 146 174 323

Family's Representative Sequence

Representative Sequence 3300049571|Ga0501034_0186956|Ga0501034_0186956_282_1424
Length 367
Sequence METAASNEKRFFERRALPLPKPQAAHPAAMLHRNRHFYLPFFRITRKGDIQMRTPPISSLRRLLVTAGLCALAAAPLGAQAAYPDRPITLIVSAAPGGTTDIAARLIAQPLAKVLGQSVVVAVSRAAPDGYTLLLQYSGYQVITPLITPGLNWDPVKSFTPIANVLSAPQVIVVRPSLPIKSVKELVSYAKAHPGELNYASSGNGSLQQVATELLNQMAGIKTTHIPYKGTGPALADLLSGNVDMTITTPPPLLGQIAAGKLRPLAVTGKKRLDSLPDVPTAAEAGYPDLIVSSWFAMYAPAGTPKAVVDKLAGEIEKIMKTEEFRKKAAEQGAEAVFMGPEELNKYQKDELVRYKTVVEKAGISAN

Samples

Sample ID Description Type Environment
1 2513237150 Cupriavidus taiwanensis STM6018 Isolate Nodule
2 2513237165 Cupriavidus neocaledonicus STM6070 Isolate Nodule
3 2599185292 Achromobacter sp. NFACC18-2 Isolate Rhizoplane
4 2643221569 Achromobacter sp. Root565 Isolate Unclassified
5 2643221594 Achromobacter sp. Root170 Isolate Unclassified
6 2643221621 Achromobacter sp. Root83 Isolate Unclassified
7 2808606395 Achromobacter sp. SLBN-14 Isolate Unclassified
8 2834641062 Cupriavidus gilardii JZ4 Isolate Unclassified
9 2840878972 Albibacillus kandeliae J95 Isolate Rhizosphere
10 2855767633 Achromobacter sp. HZ34 Isolate Nodule
11 2857537821 Achromobacter sp. R-71975 Isolate Unclassified
12 2857542790 Achromobacter sp. R-72367 Isolate Unclassified
13 2858688981 Cupriavidus sp. UYMMa02A Isolate Unclassified
14 2881927736 Candidimonas sp. SYP-B2681 Isolate Rhizosphere
15 2904541872 Variovorax sp. 1615 Isolate Rhizosphere
16 2928115317 Pseudacidovorax sp. 1753 Isolate Rhizosphere
17 2929160207 Variovorax sp. R-72349 Hybrid assembly Isolate Unclassified
18 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
19 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
20 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
21 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
22 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
23 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
24 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
25 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
26 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
27 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
28 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
29 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
32 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
33 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
34 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
35 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
36 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
37 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
38 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
39 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
40 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
41 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
42 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
43 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
44 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
45 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
46 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
49 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
50 3300009988 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_233 metaG Metagenome Rhizosphere
51 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
52 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
53 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
55 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
56 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
58 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
59 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
60 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
62 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
63 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
76 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
77 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
79 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
80 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
81 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
82 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
83 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
84 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
85 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
86 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
87 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
88 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
89 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
90 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
91 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
92 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
93 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
94 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
95 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
96 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
97 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
98 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
99 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
100 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
101 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
102 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
103 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
104 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
105 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
106 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
107 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
108 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
109 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
110 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
111 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
112 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
113 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
114 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
120 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
121 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
122 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
123 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
125 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
126 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
127 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
128 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
129 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
130 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
131 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
132 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
133 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
134 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
135 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
136 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
137 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
138 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
139 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
140 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
141 3300053733 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 endosphere Metagenome Endosphere
142 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
143 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
144 644736347 Cupriavidus taiwanensis LMG 19424 Isolate Nodule
145 8003400568 Cupriavidus gilardii USM5 Isolate Rhizosphere
146 8048746797 Alcaligenes endophyticus DSM 100498 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 89.69
Metatranscriptomes 0
Isolates 10.31

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 33.51
Nodule 3.09
Rhizoplane 1.03
Rhizosphere 50
Stem 0
Stem Tuber 0
Unclassified 12.37

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25151J46595_10002645 3300003187 Bacteria 10545
2 Ga0055524_1001369 3300003775 Bacteria 14151
3 Ga0055536_1001508 3300003781 Bacteria 13983
4 Ga0055534_1000957 3300003784 Bacteria 12821
5 Ga0055534_1001648 3300003784 Bacteria 8615
6 Ga0055540_1015876 3300003792 Bacteria 2170
7 Ga0055531_10000312 3300003794 Bacteria 47848
8 JGI25405J52794_10005969 3300003911 Bacteria 2217
9 Ga0070670_100022761 3300005331 Bacteria 5393
10 Ga0070680_100069276 3300005336 Bacteria 2897
11 Ga0070680_100188652 3300005336 Bacteria 1737
12 Ga0070675_100010655 3300005354 Bacteria 7187
13 Ga0070685_10203332 3300005466 Bacteria 1289
14 Ga0070679_100332670 3300005530 Bacteria 1467
15 Ga0070665_100520711 3300005548 Bacteria 1201
16 Ga0070664_100149524 3300005564 Bacteria 2061
17 Ga0068864_100003483 3300005618 Bacteria 13006
18 Ga0068863_100020149 3300005841 Bacteria 6380
19 Ga0068862_100076194 3300005844 Bacteria 2903
20 Ga0081455_10004890 3300005937 Bacteria 14850
21 Ga0081455_10026879 3300005937 Bacteria 5283
22 Ga0081538_10049815 3300005981 Bacteria 2537
23 Ga0075365_10002886 3300006038 Bacteria 8656
24 Ga0075365_10011679 3300006038 Bacteria 5174
25 Ga0075365_10045165 3300006038 Bacteria 2889
26 Ga0075365_10180326 3300006038 Bacteria 1476
27 Ga0075365_10295629 3300006038 Bacteria 1139
28 Ga0075363_100101753 3300006048 Bacteria 1590
29 Ga0075364_10005576 3300006051 Bacteria 7335
30 Ga0075364_10006108 3300006051 Bacteria 7055
31 Ga0075364_10010115 3300006051 Bacteria 5689
32 Ga0075364_10227462 3300006051 Bacteria 1267
33 Ga0075369_10000494 3300006186 Bacteria 12240
34 Ga0075369_10011366 3300006186 Bacteria 3502
35 Ga0075366_10126000 3300006195 Bacteria 1545
36 Ga0075428_100085950 3300006844 Bacteria 3431
37 Ga0075430_100035497 3300006846 Bacteria 4230
38 Ga0075430_100078882 3300006846 Bacteria 2760
39 Ga0075431_100029134 3300006847 Bacteria 5680
40 Ga0099826_10000020 3300006948 Bacteria 183920
41 Ga0111539_10110389 3300009094 Bacteria 3227
42 Ga0111539_10687095 3300009094 Bacteria 1191
43 Ga0114129_10514856 3300009147 Bacteria 1561
44 Ga0105243_10000101 3300009148 Bacteria 98298
45 Ga0105242_10149684 3300009176 Unclassified 2034
46 Ga0105242_10435439 3300009176 Bacteria 1232
47 Ga0105035_102087 3300009988 Bacteria 1448
48 Ga0163163_10001257 3300014325 Bacteria 21367
49 Ga0209565_1000092 3300025263 Bacteria 141563
50 Ga0209455_1000795 3300025272 Bacteria 17472
51 Ga0209673_1010895 3300025273 Bacteria 3795
52 Ga0209675_1000809 3300025291 Bacteria 20627
53 Ga0209675_1000951 3300025291 Bacteria 18424
54 Ga0209676_1000012 3300025292 Bacteria 841431
55 Ga0209676_1001997 3300025292 Bacteria 16139
56 Ga0209025_1000548 3300025294 Bacteria 70257
57 Ga0209025_1000892 3300025294 Bacteria 46436
58 Ga0209025_1001053 3300025294 Bacteria 40223
59 Ga0209025_1001159 3300025294 Bacteria 37305
60 Ga0209564_1001095 3300025295 Bacteria 32240
61 Ga0209564_1002067 3300025295 Bacteria 17262
62 Ga0209564_1002203 3300025295 Bacteria 16266
63 Ga0209758_1010717 3300025297 Bacteria 5438
64 Ga0209050_1004549 3300025298 Bacteria 9317
65 Ga0209256_1001280 3300025299 Bacteria 27204
66 Ga0207426_1059363 3300025302 Bacteria 1106
67 Ga0209051_1001437 3300025303 Bacteria 20303
68 Ga0209257_1000015 3300025304 Bacteria 908141
69 Ga0209257_1035029 3300025304 Bacteria 1557
70 Ga0207645_10218162 3300025907 Bacteria 1257
71 Ga0207707_10131751 3300025912 Bacteria 2186
72 Ga0207709_10000103 3300025935 Bacteria 131589
73 Ga0207691_10060178 3300025940 Bacteria 3452
74 Ga0207679_10063592 3300025945 Bacteria 2755
75 Ga0207639_10201179 3300026041 Bacteria 1708
76 Ga0207641_10068672 3300026088 Bacteria 3039
77 Ga0207676_10094920 3300026095 Bacteria 2458
78 Ga0207683_10110832 3300026121 Bacteria 2457
79 Ga0207698_10364506 3300026142 Bacteria 1370
80 Ga0209371_1026532 3300027312 Bacteria 1317
81 Ga0209282_1000045 3300027666 Bacteria 118401
82 Ga0268266_10020097 3300028379 Bacteria 5692
83 Ga0268266_10234910 3300028379 Bacteria 1690
84 Ga0307515_10000257 3300028794 Bacteria 131732
85 Ga0307515_10000472 3300028794 Bacteria 96172
86 Ga0307515_10019963 3300028794 Bacteria 12005
87 Ga0307515_10265059 3300028794 Bacteria 1448
88 Ga0268256_1030164 3300030500 Bacteria 1317
89 Ga0307408_100265264 3300031548 Bacteria 1423
90 Ga0307514_10001925 3300031649 Bacteria 22740
91 Ga0307410_10176458 3300031852 Bacteria 1614
92 Ga0307410_10253530 3300031852 Bacteria 1369
93 Ga0307406_10190359 3300031901 Bacteria 1501
94 Ga0307406_10241651 3300031901 Bacteria 1355
95 Ga0307407_10111206 3300031903 Bacteria 1720
96 Ga0307416_100037207 3300032002 Bacteria 3742
97 Ga0307416_100084936 3300032002 Bacteria 2692
98 Ga0307416_100120792 3300032002 Bacteria 2334
99 Ga0307414_10129682 3300032004 Bacteria 1955
100 Ga0307411_10039089 3300032005 Bacteria 2999
101 Ga0307510_10268420 3300033180 Bacteria 1184
102 Ga0373955_0026499 3300035172 Bacteria 2987
103 Ga0373931_0258970 3300035691 Bacteria 1061
104 Ga0373935_0140548 3300035692 Bacteria 1631
105 Ga0466969_0004457 3300044656 Bacteria 7450
106 Ga0466966_0002420 3300044684 Bacteria 12193
107 Ga0466961_0018529 3300044693 Bacteria 4479
108 Ga0466959_0014166 3300045049 Bacteria 5788
109 Ga0451576_0361054 3300045051 Bacteria 1521
110 Ga0495605_0002620 3300046474 Bacteria 11041
111 Ga0495596_0003319 3300046500 Bacteria 8199
112 Ga0495610_0000402 3300046512 Bacteria 44548
113 Ga0495616_0027516 3300046513 Bacteria 3016
114 Ga0495663_0049078 3300046525 Bacteria 1303
115 Ga0495633_0000903 3300046558 Bacteria 25324
116 Ga0495661_0024161 3300046665 Bacteria 3935
117 Ga0495671_0000949 3300046692 Bacteria 20400
118 Ga0495604_0041979 3300047317 Bacteria 3586
119 Ga0496102_0057351 3300048905 Bacteria 3556
120 Ga0496116_0012327 3300048919 Bacteria 6990
121 Ga0496117_0021597 3300048920 Bacteria 5200
122 Ga0496118_0014972 3300048921 Bacteria 7216
123 Ga0496121_0027429 3300048924 Bacteria 5330
124 Ga0496121_0104354 3300048924 Bacteria 2178
125 Ga0496122_0001089 3300048925 Bacteria 47126
126 Ga0496124_0000013 3300048927 Bacteria 484884
127 Ga0496125_0196094 3300048928 Bacteria 1328
128 Ga0501032_0117786 3300049569 Bacteria 1756
129 Ga0501033_0293934 3300049570 Bacteria 1145
130 Ga0501034_0000530 3300049571 Bacteria 60898
131 Ga0501034_0003601 3300049571 Bacteria 17582
132 Ga0501034_0186956 3300049571 Bacteria 2034
133 Ga0501034_0470880 3300049571 Bacteria 1172
134 Ga0501047_0001163 3300049581 Bacteria 26065
135 Ga0501048_0207702 3300049582 Bacteria 1389
136 Ga0501072_0240886 3300049588 Bacteria 1441
137 Ga0501073_0359131 3300049589 Bacteria 1006
138 Ga0501076_0170926 3300049592 Bacteria 1772
139 Ga0501076_0238789 3300049592 Bacteria 1486
140 Ga0501076_0271870 3300049592 Bacteria 1388
141 Ga0501080_0227817 3300049742 Bacteria 1704
142 Ga0501035_0005278 3300049822 Bacteria 12229
143 Ga0501044_0003984 3300049823 Bacteria 16539
144 nmdc:mga03683_525_c1 3300050489 Bacteria 10966
145 nmdc:mga03683_67098_c1 3300050489 Bacteria 1526
146 nmdc:mga03683_94528_c1 3300050489 Bacteria 1307
147 nmdc:mga00v17_11365_c1 3300050491 Bacteria 4893
148 nmdc:mga00v17_129_c1 3300050491 Bacteria 44201
149 nmdc:mga00v17_149135_c1 3300050491 Bacteria 1502
150 nmdc:mga0yw44_29698_c1 3300050492 Bacteria 3159
151 nmdc:mga0yw44_54386_c1 3300050492 Bacteria 2433
152 nmdc:mga0yw44_7536_c1 3300050492 Bacteria 5361
153 nmdc:mga0yw44_94873_c1 3300050492 Bacteria 1891
154 nmdc:mga0k408_109802_c1 3300050493 Bacteria 1630
155 nmdc:mga0k408_40912_c1 3300050493 Bacteria 2668
156 nmdc:mga07m45_134376_c1 3300050496 Bacteria 1431
157 nmdc:mga0qj67_334904_c1 3300050509 Bacteria 1224
158 nmdc:mga0qj67_77560_c1 3300050509 Bacteria 2658
159 nmdc:mga06r32_485472_c1 3300050510 Bacteria 1213
160 nmdc:mga08y16_102315_c1 3300050511 Bacteria 2982
161 nmdc:mga0sz30_46643_c1 3300050516 Bacteria 1830
162 nmdc:mga0sz30_707_c1 3300050516 Bacteria 12257
163 Ga0500610_0000022 3300053079 Bacteria 60344
164 Ga0500651_0029389 3300053093 Bacteria 3456
165 Ga0500641_0005189 3300053096 Bacteria 4613
166 Ga0500607_000049 3300053121 Bacteria 80941
167 Ga0500590_008407 3300053148 Bacteria 5150
168 Ga0500590_103189 3300053148 Bacteria 1366
169 Ga0500619_000557 3300053154 Bacteria 6373
170 Ga0500634_0011242 3300053161 Bacteria 4611
171 Ga0500552_000036 3300053733 Bacteria 11659
172 Ga0501084_0109124 3300054114 Bacteria 2325
173 Ga0501084_0369360 3300054114 Bacteria 1212
174 Ga0530510_0089625 3300061734 Bacteria 2243

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300035172 Ga0373955_0026499 Ga0373955_0026499_28_813 254
2 3300025294 Ga0209025_1001053 Ga0209025_100105329 270
3 3300049571 Ga0501034_0000530 Ga0501034_0000530_28667_29710 270
4 3300006186 Ga0075369_10011366 Ga0075369_100113664 286
5 3300050516 nmdc:mga0sz30_46643_c1 nmdc:mga0sz30_46643_c1_858_1820 286
6 3300031903 Ga0307407_10111206 Ga0307407_101112062 287
7 3300032002 Ga0307416_100084936 Ga0307416_1000849363 287
8 3300050489 nmdc:mga03683_67098_c1 nmdc:mga03683_67098_c1_59_931 288
9 3300009094 Ga0111539_10110389 Ga0111539_101103892 290
10 3300006846 Ga0075430_100035497 Ga0075430_1000354973 291
11 3300006847 Ga0075431_100029134 Ga0075431_1000291342 291
12 3300028794 Ga0307515_10000257 Ga0307515_1000025796 294
13 3300031649 Ga0307514_10001925 Ga0307514_1000192519 294
14 3300033180 Ga0307510_10268420 Ga0307510_102684201 294
15 3300006051 Ga0075364_10005576 Ga0075364_100055765 298
16 3300050491 nmdc:mga00v17_149135_c1 nmdc:mga00v17_149135_c1_449_1429 298
17 3300009176 Ga0105242_10149684 Ga0105242_101496842 299
18 3300048924 Ga0496121_0104354 Ga0496121_0104354_114_1106 299
19 3300048920 Ga0496117_0021597 Ga0496117_0021597_1606_2592 300
20 3300048921 Ga0496118_0014972 Ga0496118_0014972_5776_6762 300
21 3300025292 Ga0209676_1001997 Ga0209676_10019973 301
22 3300025298 Ga0209050_1004549 Ga0209050_10045499 301
23 3300027312 Ga0209371_1026532 Ga0209371_10265322 302
24 3300030500 Ga0268256_1030164 Ga0268256_10301642 302
25 3300048928 Ga0496125_0196094 Ga0496125_0196094_250_1236 302
26 3300053148 Ga0500590_008407 Ga0500590_008407_3040_4008 302
27 3300025304 Ga0209257_1035029 Ga0209257_10350291 304
28 3300009176 Ga0105242_10435439 Ga0105242_104354391 305
29 3300049571 Ga0501034_0186956 Ga0501034_0186956_282_1424 305
30 3300049581 Ga0501047_0001163 Ga0501047_0001163_14842_15984 305
31 3300049822 Ga0501035_0005278 Ga0501035_0005278_870_2012 305
32 3300049823 Ga0501044_0003984 Ga0501044_0003984_9916_11058 305
33 3300031901 Ga0307406_10241651 Ga0307406_102416511 306
34 3300032002 Ga0307416_100120792 Ga0307416_1001207921 306
35 3300028379 Ga0268266_10234910 Ga0268266_102349102 307
36 3300046474 Ga0495605_0002620 Ga0495605_0002620_839_1816 307
37 3300046513 Ga0495616_0027516 Ga0495616_0027516_779_1756 307
38 3300046665 Ga0495661_0024161 Ga0495661_0024161_2568_3545 307
39 3300048919 Ga0496116_0012327 Ga0496116_0012327_5140_6117 307
40 3300048924 Ga0496121_0027429 Ga0496121_0027429_873_1850 307
41 3300048925 Ga0496122_0001089 Ga0496122_0001089_22375_23352 307
42 3300050509 nmdc:mga0qj67_334904_c1 nmdc:mga0qj67_334904_c1_144_1178 307
43 3300035691 Ga0373931_0258970 Ga0373931_0258970_23_994 308
44 3300046558 Ga0495633_0000903 Ga0495633_0000903_8997_10001 308
45 3300046692 Ga0495671_0000949 Ga0495671_0000949_13082_14059 309
46 3300047317 Ga0495604_0041979 Ga0495604_0041979_1588_2625 309
47 3300006048 Ga0075363_100101753 Ga0075363_1001017532 310
48 3300050492 nmdc:mga0yw44_54386_c1 nmdc:mga0yw44_54386_c1_1151_2128 310
49 3300005336 Ga0070680_100069276 Ga0070680_1000692762 311
50 3300050496 nmdc:mga07m45_134376_c1 nmdc:mga07m45_134376_c1_342_1322 311
51 3300053161 Ga0500634_0011242 Ga0500634_0011242_1066_2031 311
52 3300005466 Ga0070685_10203332 Ga0070685_102033322 312
53 3300005548 Ga0070665_100520711 Ga0070665_1005207111 312
54 3300006038 Ga0075365_10045165 Ga0075365_100451652 312
55 3300006186 Ga0075369_10000494 Ga0075369_1000049414 312
56 3300006195 Ga0075366_10126000 Ga0075366_101260002 312
57 3300009094 Ga0111539_10687095 Ga0111539_106870952 312
58 3300009988 Ga0105035_102087 Ga0105035_1020872 312
59 3300025302 Ga0207426_1059363 Ga0207426_10593632 312
60 3300028379 Ga0268266_10020097 Ga0268266_100200977 312
61 3300035692 Ga0373935_0140548 Ga0373935_0140548_406_1368 312
62 3300049571 Ga0501034_0003601 Ga0501034_0003601_2548_3534 312
63 3300050489 nmdc:mga03683_525_c1 nmdc:mga03683_525_c1_4658_5635 312
64 3300050493 nmdc:mga0k408_40912_c1 nmdc:mga0k408_40912_c1_136_1104 312
65 3300050511 nmdc:mga08y16_102315_c1 nmdc:mga08y16_102315_c1_1080_2057 312
66 3300050516 nmdc:mga0sz30_707_c1 nmdc:mga0sz30_707_c1_921_1898 312
67 3300053096 Ga0500641_0005189 Ga0500641_0005189_2920_3897 312
68 3300005530 Ga0070679_100332670 Ga0070679_1003326702 313
69 3300025907 Ga0207645_10218162 Ga0207645_102181622 313
70 3300025940 Ga0207691_10060178 Ga0207691_100601782 313
71 3300026121 Ga0207683_10110832 Ga0207683_101108322 313
72 3300044656 Ga0466969_0004457 Ga0466969_0004457_89_1051 313
73 3300044684 Ga0466966_0002420 Ga0466966_0002420_8092_9054 313
74 3300044693 Ga0466961_0018529 Ga0466961_0018529_501_1463 313
75 3300045049 Ga0466959_0014166 Ga0466959_0014166_814_1776 313
76 3300050489 nmdc:mga03683_94528_c1 nmdc:mga03683_94528_c1_203_1174 313
77 3300053733 Ga0500552_000036 Ga0500552_000036_8390_9370 313
78 3300046525 Ga0495663_0049078 Ga0495663_0049078_240_1256 314
79 3300003792 Ga0055540_1015876 Ga0055540_10158762 315
80 3300003794 Ga0055531_10000312 Ga0055531_1000031255 315
81 3300025273 Ga0209673_1010895 Ga0209673_10108952 315
82 3300025303 Ga0209051_1001437 Ga0209051_100143711 315
83 3300025304 Ga0209257_1000015 Ga0209257_1000015116 315
84 3300045051 Ga0451576_0361054 Ga0451576_0361054_520_1503 315
85 3300050493 nmdc:mga0k408_109802_c1 nmdc:mga0k408_109802_c1_503_1474 315
86 3300014325 Ga0163163_10001257 Ga0163163_1000125721 316
87 3300028794 Ga0307515_10265059 Ga0307515_102650592 316
88 3300031852 Ga0307410_10253530 Ga0307410_102535302 316
89 3300032005 Ga0307411_10039089 Ga0307411_100390892 316
90 3300053154 Ga0500619_000557 Ga0500619_000557_4478_5464 316
91 iso_pu_bacteria 2904541872 2904548824 316
92 iso_pu_bacteria 2929160207 2929166759 316
93 3300005331 Ga0070670_100022761 Ga0070670_1000227615 317
94 3300005354 Ga0070675_100010655 Ga0070675_1000106555 317
95 3300005564 Ga0070664_100149524 Ga0070664_1001495242 317
96 3300005618 Ga0068864_100003483 Ga0068864_10000348313 317
97 3300005841 Ga0068863_100020149 Ga0068863_1000201492 317
98 3300005844 Ga0068862_100076194 Ga0068862_1000761942 317
99 3300006038 Ga0075365_10295629 Ga0075365_102956292 317
100 3300006948 Ga0099826_10000020 Ga0099826_1000002023 317
101 3300025945 Ga0207679_10063592 Ga0207679_100635922 317
102 3300026088 Ga0207641_10068672 Ga0207641_100686722 317
103 3300026095 Ga0207676_10094920 Ga0207676_100949202 317
104 3300026142 Ga0207698_10364506 Ga0207698_103645061 317
105 3300027666 Ga0209282_1000045 Ga0209282_100004554 317
106 3300028794 Ga0307515_10000472 Ga0307515_1000047225 317
107 3300031548 Ga0307408_100265264 Ga0307408_1002652642 317
108 3300031852 Ga0307410_10176458 Ga0307410_101764582 317
109 3300031901 Ga0307406_10190359 Ga0307406_101903592 317
110 3300032002 Ga0307416_100037207 Ga0307416_1000372073 317
111 3300032004 Ga0307414_10129682 Ga0307414_101296822 317
112 3300046500 Ga0495596_0003319 Ga0495596_0003319_6334_7311 317
113 3300046512 Ga0495610_0000402 Ga0495610_0000402_25664_26641 317
114 3300048905 Ga0496102_0057351 Ga0496102_0057351_956_1984 317
115 3300049569 Ga0501032_0117786 Ga0501032_0117786_66_1040 317
116 3300049582 Ga0501048_0207702 Ga0501048_0207702_228_1202 317
117 3300049588 Ga0501072_0240886 Ga0501072_0240886_201_1187 317
118 3300049589 Ga0501073_0359131 Ga0501073_0359131_22_996 317
119 3300049592 Ga0501076_0238789 Ga0501076_0238789_308_1282 317
120 3300049592 Ga0501076_0271870 Ga0501076_0271870_324_1310 317
121 3300049742 Ga0501080_0227817 Ga0501080_0227817_534_1508 317
122 3300053079 Ga0500610_0000022 Ga0500610_0000022_20566_21546 317
123 3300053121 Ga0500607_000049 Ga0500607_000049_53162_54142 317
124 3300053148 Ga0500590_103189 Ga0500590_103189_261_1247 317
125 3300054114 Ga0501084_0369360 Ga0501084_0369360_191_1165 317
126 iso_pu_bacteria 2599185292 2599906027 317
127 iso_pu_bacteria 2643221569 2643858955 317
128 iso_pu_bacteria 2643221594 2643981873 317
129 iso_pu_bacteria 2643221621 2644122821 317
130 iso_pu_bacteria 2808606395 2809033938 317
131 iso_pu_bacteria 2857537821 2857539840 317
132 iso_pu_bacteria 2928115317 2928118213 317
133 3300003775 Ga0055524_1001369 Ga0055524_10013695 318
134 3300003781 Ga0055536_1001508 Ga0055536_10015089 318
135 3300003784 Ga0055534_1000957 Ga0055534_10009579 318
136 3300003784 Ga0055534_1001648 Ga0055534_10016486 318
137 3300005937 Ga0081455_10026879 Ga0081455_100268791 318
138 3300006038 Ga0075365_10011679 Ga0075365_100116792 318
139 3300006051 Ga0075364_10006108 Ga0075364_100061088 318
140 3300006051 Ga0075364_10010115 Ga0075364_100101154 318
141 3300025263 Ga0209565_1000092 Ga0209565_100009216 318
142 3300025272 Ga0209455_1000795 Ga0209455_100079513 318
143 3300025291 Ga0209675_1000809 Ga0209675_100080911 318
144 3300025291 Ga0209675_1000951 Ga0209675_100095110 318
145 3300025292 Ga0209676_1000012 Ga0209676_1000012120 318
146 3300025294 Ga0209025_1000892 Ga0209025_100089226 318
147 3300025294 Ga0209025_1001159 Ga0209025_10011598 318
148 3300025295 Ga0209564_1001095 Ga0209564_10010959 318
149 3300025295 Ga0209564_1002067 Ga0209564_10020679 318
150 3300025295 Ga0209564_1002203 Ga0209564_10022039 318
151 3300025297 Ga0209758_1010717 Ga0209758_10107172 318
152 3300025299 Ga0209256_1001280 Ga0209256_100128011 318
153 3300048927 Ga0496124_0000013 Ga0496124_0000013_100148_101140 318
154 3300049571 Ga0501034_0470880 Ga0501034_0470880_118_1110 318
155 3300050491 nmdc:mga00v17_11365_c1 nmdc:mga00v17_11365_c1_672_1688 318
156 3300050491 nmdc:mga00v17_129_c1 nmdc:mga00v17_129_c1_25041_26033 318
157 3300050492 nmdc:mga0yw44_29698_c1 nmdc:mga0yw44_29698_c1_1336_2316 318
158 3300053093 Ga0500651_0029389 Ga0500651_0029389_1009_2049 318
159 iso_pu_bacteria 2834641062 2834643742 318
160 iso_pu_bacteria 2840878972 2840882406 318
161 iso_pu_bacteria 2855767633 2855773056 318
162 iso_pu_bacteria 2857542790 2857543066 318
163 iso_pu_bacteria 2881927736 2881929147 318
164 iso_pu_bacteria 8003400568 8003403229 318
165 iso_pu_bacteria 8048746797 8048748781 318
166 3300003911 JGI25405J52794_10005969 JGI25405J52794_100059692 319
167 3300005336 Ga0070680_100188652 Ga0070680_1001886522 319
168 3300005937 Ga0081455_10004890 Ga0081455_100048903 319
169 3300005981 Ga0081538_10049815 Ga0081538_100498151 319
170 3300006038 Ga0075365_10002886 Ga0075365_100028867 319
171 3300006038 Ga0075365_10180326 Ga0075365_101803261 319
172 3300006051 Ga0075364_10227462 Ga0075364_102274621 319
173 3300006844 Ga0075428_100085950 Ga0075428_1000859501 319
174 3300006846 Ga0075430_100078882 Ga0075430_1000788822 319
175 3300009147 Ga0114129_10514856 Ga0114129_105148562 319
176 3300025912 Ga0207707_10131751 Ga0207707_101317511 319
177 3300026041 Ga0207639_10201179 Ga0207639_102011791 319
178 3300028794 Ga0307515_10019963 Ga0307515_100199639 319
179 3300049570 Ga0501033_0293934 Ga0501033_0293934_128_1114 319
180 3300049592 Ga0501076_0170926 Ga0501076_0170926_358_1341 319
181 3300050492 nmdc:mga0yw44_7536_c1 nmdc:mga0yw44_7536_c1_804_1787 319
182 3300050492 nmdc:mga0yw44_94873_c1 nmdc:mga0yw44_94873_c1_866_1849 319
183 3300050509 nmdc:mga0qj67_77560_c1 nmdc:mga0qj67_77560_c1_649_1632 319
184 3300050510 nmdc:mga06r32_485472_c1 nmdc:mga06r32_485472_c1_214_1197 319
185 3300054114 Ga0501084_0109124 Ga0501084_0109124_857_1840 319
186 3300061734 Ga0530510_0089625 Ga0530510_0089625_84_1064 319
187 iso_pu_bacteria 2513237150 2513954966 319
188 iso_pu_bacteria 2513237165 2514041455 319
189 iso_pu_bacteria 2858688981 2858696837 319
190 iso_pu_bacteria 644736347 644748235 319
191 3300003187 JGI25151J46595_10002645 JGI25151J46595_100026458 320
192 3300009148 Ga0105243_10000101 Ga0105243_1000010169 320
193 3300025294 Ga0209025_1000548 Ga0209025_100054848 320
194 3300025935 Ga0207709_10000103 Ga0207709_1000010332 320

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03401

TctC

Tripartite tricarboxylate transporter family receptor

103

364

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
8hkb-assembly1.cif.gz_A tpa bound-form of periplasmic terephthalate binding protein (tbp) from ideonella sakaiensis mutant k184d 0.9622 27 317
2dvz-assembly1.cif.gz_A structure of a periplasmic transporter 0.9611 22 319
5oku-assembly1.cif.gz_A r. palustris rpa4515 with adipate 0.9525 23 317
2f5x-assembly3.cif.gz_C structure of periplasmic binding protein bugd 0.9522 23 317
2dvz-assembly1.cif.gz_A structure of a periplasmic transporter 0.9518 22 319
ID Description Score Start End Superfamily
4x9tA02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9384 122 239 3.40.190.10
2dvzA01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Bordetella uptake gene, domain 1 0.9298 22 317 3.40.190.150
2f5xC01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Bordetella uptake gene, domain 1 0.9252 23 317 3.40.190.150
6hkeC02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9217 122 244 3.40.190.10
2qpqC02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9211 122 244 3.40.190.10
ID Description Score Start End GO Terms
AF-A0A533IWB4-F1-model_v4 deleted 0.9904 22 98
AF-A0A537DML3-F1-model_v4 Tripartite tricarboxylate transporter substrate binding protein 0.9757 31 317
AF-A0A4Q7NH98-F1-model_v4 Tripartite-type tricarboxylate transporter receptor subunit TctC 0.9701 17 319
AF-A0A1W6ZRV1-F1-model_v4 LacI family transcriptional regulator 0.9698 17 319
AF-A0A5C8CF86-F1-model_v4 deleted 0.969 34 317

Feature Viewer

pLDDT pTM Quality
89.58 0.86 High
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Predicted Structure (AlphaFold2)

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