F298772

General Info

Members Datasets Scaffolds Average Seq Length
194 150 388 211

Family's Representative Sequence

Representative Sequence 3300025939|Ga0207665_10386771|Ga0207665_103867712
Length 252
Sequence MFYEVLMKKDIPKGEKGKSEMSDSRPPPMFIADDLGLDFLNSIGTPVNTVIEWLANGEDLLTWLEQAKLIDPAQAAAIRVSSFPGELDEVAAQARALREWFRGFVLAHMGRPLTAKALGLLEPLNRVLERDEGYGVIVARFGRPQNQRAPSGLEWRVLRRWSTPNALLLPIAQAMAHLVCSEDFSLVKGCEGKTCTLLFLDTTRGRARRWCSMTICGNRVKQAAHRPLELRARTMFRTARQRAWSRSREPPA

Samples

Sample ID Description Type Environment
1 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
3 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
4 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
5 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
6 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
7 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
8 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
9 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
10 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
14 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
18 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
19 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
22 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
23 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
24 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
25 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
26 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
27 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
28 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
29 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
30 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
31 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
32 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
33 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
34 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
36 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
38 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
39 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
40 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
41 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
42 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
43 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
44 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
45 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
46 3300012510 Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.9.old.080610 Metagenome Rhizosphere
47 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
48 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
49 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
50 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
51 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
52 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
53 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
54 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
55 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
56 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
57 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
58 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
59 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
60 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
76 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
77 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
78 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
79 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
80 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
81 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
82 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
83 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
84 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
85 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
86 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
87 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
88 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
89 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
90 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
91 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
92 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
93 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
94 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
95 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
96 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
97 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
98 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
99 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
100 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
101 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
102 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
103 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
104 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
105 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
106 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
107 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
108 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
109 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
110 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
111 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
112 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
113 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
114 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
115 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
116 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
117 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
118 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
119 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
120 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
121 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
122 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
123 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
124 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
125 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
126 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
127 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
128 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
129 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
130 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
131 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
132 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
137 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
139 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
140 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
141 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
142 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere
143 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
144 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
145 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
146 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
147 2511231018 Pseudomonas sp. GM60 Isolate Nodule
148 2511231019 Pseudomonas sp. GM67 Isolate Nodule
149 2687453257 Planctomyces sp. SH-PL62 Isolate Unclassified
150 2808606382 Pseudomonas sp. SJZ080 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.94
Metatranscriptomes 0
Isolates 2.06

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.89
Nodule 1.03
Rhizoplane 7.22
Rhizosphere 71.13
Stem 0
Stem Tuber 0
Unclassified 7.73

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207665_10386771 3300025939 Unclassified 1063
2 MBSR1b_contig_604270 2162886012 Bacteria 1150
3 JGI25159J45721_1001310 3300002987 Bacteria 10496
4 JGI25151J46595_10000182 3300003187 Bacteria 78722
5 rootH2_10103293 3300003320 Bacteria 5038
6 rootL2_10021837 3300003322 Unclassified 1031
7 JGI25160J50197_1004965 3300003354 Bacteria 5646
8 Ga0055534_1018711 3300003784 Unclassified 1201
9 Ga0055543_1001398 3300004625 Bacteria 9628
10 Ga0055543_1003522 3300004625 Bacteria 4577
11 Ga0065165_1000275 3300005262 Bacteria 87709
12 Ga0065165_1002526 3300005262 Bacteria 15224
13 Ga0068868_100838698 3300005338 Bacteria 832
14 Ga0070668_100792635 3300005347 Bacteria 841
15 Ga0070688_100440688 3300005365 Bacteria 972
16 Ga0070709_10001375 3300005434 Bacteria 13254
17 Ga0070709_10003840 3300005434 Bacteria 8090
18 Ga0070714_100704069 3300005435 Bacteria 975
19 Ga0070713_100024782 3300005436 Bacteria 4680
20 Ga0070713_100129270 3300005436 Bacteria 2225
21 Ga0070713_100283014 3300005436 Bacteria 1522
22 Ga0070710_10004710 3300005437 Bacteria 6451
23 Ga0070710_10072345 3300005437 Bacteria 1991
24 Ga0070711_100008721 3300005439 Bacteria 6222
25 Ga0070711_100016544 3300005439 Bacteria 4684
26 Ga0070706_100002310 3300005467 Bacteria 19275
27 Ga0070706_100127517 3300005467 Bacteria 2373
28 Ga0070706_100218362 3300005467 Unclassified 1780
29 Ga0070665_100245484 3300005548 Bacteria 1791
30 Ga0068856_100274281 3300005614 Bacteria 1703
31 Ga0068852_100322945 3300005616 Bacteria 1500
32 Ga0068859_101255305 3300005617 Bacteria 816
33 Ga0068864_100932589 3300005618 Bacteria 858
34 Ga0068866_10598072 3300005718 Bacteria 744
35 Ga0068863_100057619 3300005841 Bacteria 3677
36 Ga0068858_100094246 3300005842 Bacteria 2789
37 Ga0081455_10066298 3300005937 Bacteria 3016
38 Ga0081540_1027738 3300005983 Bacteria 3199
39 Ga0070717_10134550 3300006028 Bacteria 2128
40 Ga0070717_10237141 3300006028 Bacteria 1607
41 Ga0070715_10000709 3300006163 Bacteria 8933
42 Ga0070716_100129417 3300006173 Bacteria 1593
43 Ga0075369_10278940 3300006186 Bacteria 778
44 Ga0097621_100361901 3300006237 Bacteria 1292
45 Ga0075428_100529867 3300006844 Bacteria 1260
46 Ga0097620_101255695 3300006931 Bacteria 816
47 Ga0105247_10092573 3300009101 Bacteria 1920
48 Ga0105243_10413301 3300009148 Bacteria 1256
49 Ga0105242_10014217 3300009176 Bacteria 6162
50 Ga0105248_10011795 3300009177 Bacteria 9640
51 Ga0105237_10482868 3300009545 Bacteria 1245
52 Ga0105238_10207922 3300009551 Bacteria 1933
53 Ga0105238_10214439 3300009551 Bacteria 1901
54 Ga0105238_10945981 3300009551 Bacteria 881
55 Ga0105249_10357014 3300009553 Bacteria 1482
56 Ga0105249_10879081 3300009553 Bacteria 963
57 Ga0105239_10392539 3300010375 Bacteria 1570
58 Ga0105246_10212002 3300011119 Bacteria 1512
59 Ga0157316_1001324 3300012510 Bacteria 1511
60 Ga0157378_10667836 3300013297 Bacteria 1056
61 Ga0157379_10570027 3300014968 Bacteria 1055
62 Ga0157376_10693422 3300014969 Bacteria 1023
63 Ga0213873_10063433 3300021358 Unclassified 1005
64 Ga0213872_10000492 3300021361 Bacteria 31562
65 Ga0213872_10031785 3300021361 Bacteria 2419
66 Ga0213872_10033619 3300021361 Bacteria 2350
67 Ga0213872_10173759 3300021361 Bacteria 933
68 Ga0213874_10036117 3300021377 Bacteria 1455
69 Ga0213876_10103141 3300021384 Bacteria 1512
70 Ga0209436_115849 3300025208 Bacteria 1150
71 Ga0209130_1000399 3300025284 Bacteria 47530
72 Ga0209130_1001485 3300025284 Bacteria 15270
73 Ga0209675_1001805 3300025291 Bacteria 11690
74 Ga0209025_1000439 3300025294 Bacteria 82082
75 Ga0209025_1017722 3300025294 Bacteria 4090
76 Ga0209758_1001501 3300025297 Bacteria 27133
77 Ga0207426_1000046 3300025302 Bacteria 422271
78 Ga0207692_10037008 3300025898 Unclassified 2384
79 Ga0207692_10070842 3300025898 Bacteria 1836
80 Ga0207692_10259248 3300025898 Bacteria 1045
81 Ga0207685_10056643 3300025905 Bacteria 1535
82 Ga0207699_10019676 3300025906 Bacteria 3605
83 Ga0207699_10112644 3300025906 Bacteria 1746
84 Ga0207684_10001020 3300025910 Bacteria 31417
85 Ga0207684_10058572 3300025910 Bacteria 3269
86 Ga0207671_10311545 3300025914 Bacteria 1244
87 Ga0207693_10002151 3300025915 Bacteria 17197
88 Ga0207663_10001035 3300025916 Bacteria 12747
89 Ga0207663_10050941 3300025916 Bacteria 2575
90 Ga0207694_10727501 3300025924 Bacteria 837
91 Ga0207700_10022088 3300025928 Bacteria 4359
92 Ga0207700_10633122 3300025928 Bacteria 953
93 Ga0207664_10743183 3300025929 Bacteria 882
94 Ga0207709_10529255 3300025935 Bacteria 924
95 Ga0207665_10029796 3300025939 Bacteria 3606
96 Ga0207711_10335195 3300025941 Bacteria 1399
97 Ga0207668_10835387 3300025972 Bacteria 817
98 Ga0207676_11065144 3300026095 Bacteria 798
99 Ga0268266_10071552 3300028379 Bacteria 3006
100 Ga0307517_10085265 3300028786 Bacteria 2648
101 Ga0307511_10046996 3300030521 Bacteria 3540
102 Ga0373938_0065707 3300034957 Bacteria 857
103 Ga0373952_0092531 3300035092 Bacteria 787
104 Ga0373923_0076558 3300035111 Bacteria 1445
105 Ga0373927_0017416 3300035695 Bacteria 4728
106 Ga0373947_0207347 3300035725 Unclassified 1284
107 Ga0373925_0044483 3300037068 Bacteria 3297
108 Ga0373925_0752608 3300037068 Bacteria 803
109 Ga0436364_0585145 3300037853 Bacteria 1242
110 Ga0436360_0026517 3300039438 Unclassified 1406
111 Ga0436360_0051595 3300039438 Bacteria 3002
112 Ga0436360_0336699 3300039438 Bacteria 2487
113 Ga0436360_0911855 3300039438 Bacteria 3904
114 Ga0436360_1092774 3300039438 Bacteria 3484
115 Ga0436361_0047321 3300039447 Bacteria 2431
116 Ga0436361_0069023 3300039447 Bacteria 1872
117 Ga0436361_0070087 3300039447 Bacteria 831
118 Ga0436361_0076715 3300039447 Bacteria 40178
119 Ga0436361_0574812 3300039447 Bacteria 1837
120 Ga0436361_0861815 3300039447 Bacteria 2765
121 Ga0436361_0873131 3300039447 Bacteria 2207
122 Ga0436361_0877842 3300039447 Bacteria 1382
123 Ga0436361_1131026 3300039447 Bacteria 1009
124 Ga0436363_1419968 3300039450 Bacteria 3481
125 Ga0436363_1578985 3300039450 Bacteria 1742
126 Ga0436362_0391003 3300039453 Bacteria 2941
127 Ga0439447_000152 3300041407 Bacteria 23926
128 Ga0439466_0010028 3300041411 Bacteria 3525
129 Ga0451791_0801402 3300041451 Unclassified 1095
130 Ga0466959_0237446 3300045049 Bacteria 1260
131 Ga0495627_064542 3300046453 Bacteria 1077
132 Ga0495592_0293334 3300046454 Bacteria 1059
133 Ga0495605_0001261 3300046474 Bacteria 16768
134 Ga0495639_0233749 3300046475 Bacteria 906
135 Ga0495584_0001072 3300046491 Bacteria 16988
136 Ga0495583_0000459 3300046506 Bacteria 60207
137 Ga0495583_0013495 3300046506 Bacteria 4553
138 Ga0495606_0001694 3300046507 Bacteria 28468
139 Ga0495606_0002595 3300046507 Bacteria 20678
140 Ga0495606_0005696 3300046507 Bacteria 11793
141 Ga0495610_0030520 3300046512 Bacteria 2824
142 Ga0495618_0194686 3300046514 Unclassified 1284
143 Ga0495665_0328934 3300046531 Unclassified 780
144 Ga0495598_0237841 3300046537 Unclassified 670
145 Ga0495597_0000330 3300046542 Bacteria 42738
146 Ga0495633_0013620 3300046558 Bacteria 4278
147 Ga0495668_0096010 3300046616 Bacteria 1622
148 Ga0495625_0005586 3300046660 Bacteria 11409
149 Ga0495599_0084453 3300046678 Unclassified 1983
150 Ga0495669_0001467 3300046684 Bacteria 9724
151 Ga0495671_0028408 3300046692 Bacteria 2881
152 Ga0495649_0001417 3300046694 Bacteria 18112
153 Ga0495589_0002180 3300046794 Bacteria 11024
154 Ga0495660_0003705 3300046810 Bacteria 9383
155 Ga0495673_0000447 3300047469 Bacteria 45237
156 Ga0495681_0000023 3300047470 Bacteria 154266
157 Ga0495686_0112762 3300047472 Bacteria 1628
158 Ga0496100_0091709 3300048903 Bacteria 2074
159 Ga0496103_0194943 3300048906 Bacteria 1302
160 Ga0496104_0005843 3300048907 Bacteria 10776
161 Ga0496106_0197534 3300048909 Bacteria 1600
162 Ga0496107_0322497 3300048910 Bacteria 1149
163 Ga0496109_0112587 3300048912 Bacteria 2530
164 Ga0496110_0461400 3300048913 Bacteria 1158
165 Ga0496111_0004843 3300048914 Bacteria 8539
166 Ga0496112_0026891 3300048915 Bacteria 5544
167 Ga0496113_0217132 3300048916 Bacteria 1523
168 Ga0496114_0074642 3300048917 Bacteria 2855
169 Ga0496115_0049827 3300048918 Bacteria 3353
170 Ga0496115_0547318 3300048918 Bacteria 925
171 Ga0496119_0000879 3300048922 Bacteria 39410
172 Ga0496120_0000025 3300048923 Bacteria 235805
173 Ga0496121_0000283 3300048924 Bacteria 105735
174 Ga0496126_0031465 3300048929 Bacteria 5013
175 Ga0496126_0743578 3300048929 Bacteria 758
176 Ga0501033_0004206 3300049570 Bacteria 11584
177 Ga0501037_0454874 3300049573 Unclassified 873
178 Ga0501043_0690933 3300049579 Bacteria 746
179 Ga0501047_0142719 3300049581 Unclassified 2273
180 Ga0501068_0281457 3300049584 Bacteria 1063
181 Ga0501035_0021363 3300049822 Bacteria 5950
182 Ga0501044_0027156 3300049823 Bacteria 6054
183 Ga0500578_0286505 3300053086 Bacteria 981
184 Ga0500562_021966 3300053108 Bacteria 1662
185 Ga0500561_0029215 3300053137 Bacteria 1375
186 Ga0500586_015751 3300053145 Bacteria 2278
187 Ga0500616_0008070 3300053153 Bacteria 6590
188 Ga0500637_0108644 3300053178 Bacteria 1609
189 Ga0500645_011268 3300053730 Bacteria 2926
190 Ga0500661_008258 3300055283 Bacteria 1914
191 2511337454 2511231018 Bacteria 6436256
192 2511343757 2511231019 Bacteria 6520662
193 2688070031 2687453257 Bacteria 6784659
194 2808957996 2808606382 Bacteria 6841132
195 Ga0207665_10386771
196 MBSR1b_contig_604270
197 JGI25159J45721_1001310
198 JGI25151J46595_10000182
199 rootH2_10103293
200 rootL2_10021837
201 JGI25160J50197_1004965
202 Ga0055534_1018711
203 Ga0055543_1001398
204 Ga0055543_1003522
205 Ga0065165_1000275
206 Ga0065165_1002526
207 Ga0068868_100838698
208 Ga0070668_100792635
209 Ga0070688_100440688
210 Ga0070709_10001375
211 Ga0070709_10003840
212 Ga0070714_100704069
213 Ga0070713_100024782
214 Ga0070713_100129270
215 Ga0070713_100283014
216 Ga0070710_10004710
217 Ga0070710_10072345
218 Ga0070711_100008721
219 Ga0070711_100016544
220 Ga0070706_100002310
221 Ga0070706_100127517
222 Ga0070706_100218362
223 Ga0070665_100245484
224 Ga0068856_100274281
225 Ga0068852_100322945
226 Ga0068859_101255305
227 Ga0068864_100932589
228 Ga0068866_10598072
229 Ga0068863_100057619
230 Ga0068858_100094246
231 Ga0081455_10066298
232 Ga0081540_1027738
233 Ga0070717_10134550
234 Ga0070717_10237141
235 Ga0070715_10000709
236 Ga0070716_100129417
237 Ga0075369_10278940
238 Ga0097621_100361901
239 Ga0075428_100529867
240 Ga0097620_101255695
241 Ga0105247_10092573
242 Ga0105243_10413301
243 Ga0105242_10014217
244 Ga0105248_10011795
245 Ga0105237_10482868
246 Ga0105238_10207922
247 Ga0105238_10214439
248 Ga0105238_10945981
249 Ga0105249_10357014
250 Ga0105249_10879081
251 Ga0105239_10392539
252 Ga0105246_10212002
253 Ga0157316_1001324
254 Ga0157378_10667836
255 Ga0157379_10570027
256 Ga0157376_10693422
257 Ga0213873_10063433
258 Ga0213872_10000492
259 Ga0213872_10031785
260 Ga0213872_10033619
261 Ga0213872_10173759
262 Ga0213874_10036117
263 Ga0213876_10103141
264 Ga0209436_115849
265 Ga0209130_1000399
266 Ga0209130_1001485
267 Ga0209675_1001805
268 Ga0209025_1000439
269 Ga0209025_1017722
270 Ga0209758_1001501
271 Ga0207426_1000046
272 Ga0207692_10037008
273 Ga0207692_10070842
274 Ga0207692_10259248
275 Ga0207685_10056643
276 Ga0207699_10019676
277 Ga0207699_10112644
278 Ga0207684_10001020
279 Ga0207684_10058572
280 Ga0207671_10311545
281 Ga0207693_10002151
282 Ga0207663_10001035
283 Ga0207663_10050941
284 Ga0207694_10727501
285 Ga0207700_10022088
286 Ga0207700_10633122
287 Ga0207664_10743183
288 Ga0207709_10529255
289 Ga0207665_10029796
290 Ga0207711_10335195
291 Ga0207668_10835387
292 Ga0207676_11065144
293 Ga0268266_10071552
294 Ga0307517_10085265
295 Ga0307511_10046996
296 Ga0373938_0065707
297 Ga0373952_0092531
298 Ga0373923_0076558
299 Ga0373927_0017416
300 Ga0373947_0207347
301 Ga0373925_0044483
302 Ga0373925_0752608
303 Ga0436364_0585145
304 Ga0436360_0026517
305 Ga0436360_0051595
306 Ga0436360_0336699
307 Ga0436360_0911855
308 Ga0436360_1092774
309 Ga0436361_0047321
310 Ga0436361_0069023
311 Ga0436361_0070087
312 Ga0436361_0076715
313 Ga0436361_0574812
314 Ga0436361_0861815
315 Ga0436361_0873131
316 Ga0436361_0877842
317 Ga0436361_1131026
318 Ga0436363_1419968
319 Ga0436363_1578985
320 Ga0436362_0391003
321 Ga0439447_000152
322 Ga0439466_0010028
323 Ga0451791_0801402
324 Ga0466959_0237446
325 Ga0495627_064542
326 Ga0495592_0293334
327 Ga0495605_0001261
328 Ga0495639_0233749
329 Ga0495584_0001072
330 Ga0495583_0000459
331 Ga0495583_0013495
332 Ga0495606_0001694
333 Ga0495606_0002595
334 Ga0495606_0005696
335 Ga0495610_0030520
336 Ga0495618_0194686
337 Ga0495665_0328934
338 Ga0495598_0237841
339 Ga0495597_0000330
340 Ga0495633_0013620
341 Ga0495668_0096010
342 Ga0495625_0005586
343 Ga0495599_0084453
344 Ga0495669_0001467
345 Ga0495671_0028408
346 Ga0495649_0001417
347 Ga0495589_0002180
348 Ga0495660_0003705
349 Ga0495673_0000447
350 Ga0495681_0000023
351 Ga0495686_0112762
352 Ga0496100_0091709
353 Ga0496103_0194943
354 Ga0496104_0005843
355 Ga0496106_0197534
356 Ga0496107_0322497
357 Ga0496109_0112587
358 Ga0496110_0461400
359 Ga0496111_0004843
360 Ga0496112_0026891
361 Ga0496113_0217132
362 Ga0496114_0074642
363 Ga0496115_0049827
364 Ga0496115_0547318
365 Ga0496119_0000879
366 Ga0496120_0000025
367 Ga0496121_0000283
368 Ga0496126_0031465
369 Ga0496126_0743578
370 Ga0501033_0004206
371 Ga0501037_0454874
372 Ga0501043_0690933
373 Ga0501047_0142719
374 Ga0501068_0281457
375 Ga0501035_0021363
376 Ga0501044_0027156
377 Ga0500578_0286505
378 Ga0500562_021966
379 Ga0500561_0029215
380 Ga0500586_015751
381 Ga0500616_0008070
382 Ga0500637_0108644
383 Ga0500645_011268
384 Ga0500661_008258
385 2511337454
386 2511343757
387 2688070031
388 2808957996

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF11706

zf-CGNR

CGNR zinc finger

187

227

0.97

PF07336

ABATE

Putative stress-induced transcription regulator

33

182

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
3h0n-assembly1.cif.gz_A-2 crystal structure of a duf1470 family protein (jann_2411) from jannaschia sp. ccs1 at 1.45 a resolution 0.6482 8 181
3h0n-assembly1.cif.gz_A-2 crystal structure of a duf1470 family protein (jann_2411) from jannaschia sp. ccs1 at 1.45 a resolution 0.6025 8 181
7keu-assembly1.cif.gz_G cryo-em structure of the caspase-1-card:asc-card octamer 0.5678 11 71
7yh8-assembly2.cif.gz_C crystal structure of a heterochiral protein complex 0.4937 29 75
7yh8-assembly2.cif.gz_C crystal structure of a heterochiral protein complex 0.3693 29 75
ID Description Score Start End Superfamily
3h0nA00 Mainly Alpha;Orthogonal Bundle;Jann2411-like fold;Jann2411-like domain 0.6244 8 181 1.10.3300.10
3h0nA00 Mainly Alpha;Orthogonal Bundle;Jann2411-like fold;Jann2411-like domain 0.5821 8 181 1.10.3300.10
1tj7A01 Mainly Alpha;Orthogonal Bundle;Fumarase C; Chain B, domain 1;Fumarase/aspartase (N-terminal domain) 0.5772 29 71 1.10.275.10
af_Q0JBL4_1_218_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.544 23 70 3.40.50.1820
af_P67601_4_151_2.30.29.30 Mainly Beta;Roll;PH-domain like;Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.5122 83 138 2.30.29.30
ID Description Score Start End GO Terms
AF-A0A534H590-F1-model_v4 Uncharacterized protein 0.922 2 79
AF-A0A534DLG9-F1-model_v4 Uncharacterized protein 0.9128 1 104
AF-A0A4Q8R150-F1-model_v4 Zinc finger CGNR domain-containing protein 0.8943 1 165
AF-A0A1E4PPL7-F1-model_v4 Zinc finger CGNR domain-containing protein 0.8942 1 176
AF-A0A6P2E6B6-F1-model_v4 Zinc finger CGNR domain-containing protein 0.8817 1 184

Map