F298680

General Info

Members Datasets Scaffolds Average Seq Length
194 128 388 684

Family's Representative Sequence

Representative Sequence 3300014325|Ga0163163_10073119|Ga0163163_100731192
Length 783
Sequence MARATAAKKVSDLPILVLTKKLLSTKVVLKVAFLIVQHKSSYHAAHSVLTTPLECADPAFSNGCGKEPGITKRRRAGAPQGLVCPRVVCILSEFVSISKPTCASLTLREESVFMRARLRNRVLMVVSVCLGLLMFGALLVKVGAQSTGSSQKMIKTYDYPVATKVDQVDDYHGVKVADPYRWLENLDSEQTHAWVEAENKLTFDFLSSIPARTKIKERLTTLWNYEKFGVPFKQGDRYFYTRNSGLQNQSVLYTVNSLESGPKEVLDPNALSSDGTVAVSGLEVSRDGKLLAYSLSASGSDWQEWKVRDVESGKDLTDDLKWVKFSTVSWTKDGAGFFYSRYDAPKADSLKQTNYFQKIYFHKIGSSQADDLLVYERPDQKDWLFGGSVSEDGKFLIITIFQGTDTKNRVYYKAIGSKDSPVVKLLDDFDAAYSYVGNDGNKFWFQTDSKSPRGRVIEIDLAKPERANWKELIPESKEALQTVTLVNHQFVLNYLKDAYTQVKVFDTSGKFVRAVAFPGFGSAEGFGGKSTDKETFYSFTGFTIKLDGSNPTYLYGYGGFNVSLTPAFSVGNLVWMEMGGVYAQPNLRGGGEYGENWHQGGMKAKKQNVFDDFISAAEWLIANKYTSTPKLAIGGGSNGGLLVGAVLTQRPDLFGAALPAVGVMDMLRFQEFTIGWAWVSDYGSSADPADFKTLYAYSPLHNIKPGTSYPPTMITTADHDDRVWPGHSFKFAATLQAAQAGPAPILIRIETKAGHGAGKPTTKIIEEIADRWAFLEKTIGPID

Samples

Sample ID Description Type Environment
1 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
2 3300000532 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNA_Illumina_Assembled Metagenome Rhizosphere
3 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
4 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
6 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
19 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
20 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
21 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
22 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
25 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
26 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
27 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
28 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
29 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
30 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
31 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
32 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
33 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
34 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
35 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
36 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
37 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
38 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
39 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
40 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
41 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
42 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
43 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
44 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
45 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
46 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
47 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
48 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
49 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
51 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
52 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
55 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
56 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
57 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
58 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
59 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
60 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
61 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
62 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
63 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
64 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
65 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
66 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
95 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
96 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
97 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
98 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
99 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
100 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
101 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
102 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
103 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
104 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
105 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
106 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
107 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
108 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
109 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
110 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
111 3300049514 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A25_B_5_drought Metagenome Rhizosphere
112 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
114 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
120 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
121 3300049667 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control Metagenome Rhizosphere
122 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
123 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
124 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
125 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
126 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
127 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
128 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.48
Metatranscriptomes 0.52
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.03
Nodule 0
Rhizoplane 5.15
Rhizosphere 92.78
Stem 0
Stem Tuber 0
Unclassified 0.52

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0163163_10073119 3300014325 Bacteria 3419
2 CNAas_1000401 3300000532 Bacteria 4206
3 JGI24751J29686_10000012 3300002459 Bacteria 115709
4 Ga0065714_10064422 3300005288 Bacteria 270668
5 Ga0065712_10000288 3300005290 Bacteria 15893
6 Ga0065712_10067728 3300005290 Bacteria 178215
7 Ga0065715_10000279 3300005293 Bacteria 24409
8 Ga0065715_10006878 3300005293 Bacteria 2784
9 Ga0065715_10108732 3300005293 Bacteria 2701
10 Ga0070690_100028959 3300005330 Bacteria 3433
11 Ga0070670_100000174 3300005331 Bacteria 58017
12 Ga0070670_100002571 3300005331 Bacteria 15003
13 Ga0070680_100000879 3300005336 Bacteria 21295
14 Ga0070680_100047667 3300005336 Bacteria 3489
15 Ga0068868_100046280 3300005338 Bacteria 3406
16 Ga0068868_100049137 3300005338 Bacteria 3311
17 Ga0070689_100057047 3300005340 Bacteria 3030
18 Ga0070669_100040913 3300005353 Bacteria 3370
19 Ga0070671_100039309 3300005355 Bacteria 3927
20 Ga0070671_100043188 3300005355 Bacteria 3746
21 Ga0070673_100010978 3300005364 Bacteria 6165
22 Ga0070688_100000875 3300005365 Bacteria 14970
23 Ga0070659_100003982 3300005366 Bacteria 10514
24 Ga0070667_100116685 3300005367 Bacteria 2318
25 Ga0070711_100000169 3300005439 Bacteria 34887
26 Ga0070705_100046601 3300005440 Bacteria 2500
27 Ga0070694_100032813 3300005444 Bacteria 3411
28 Ga0070708_100002206 3300005445 Bacteria 15047
29 Ga0070678_100047079 3300005456 Bacteria 3097
30 Ga0070681_10000128 3300005458 Bacteria 56982
31 Ga0070681_10019402 3300005458 Bacteria 6804
32 Ga0070685_10007279 3300005466 Bacteria 5659
33 Ga0070706_100011737 3300005467 Bacteria 8129
34 Ga0070706_100036502 3300005467 Bacteria 4540
35 Ga0070706_100103005 3300005467 Bacteria 2654
36 Ga0070707_100004887 3300005468 Bacteria 12560
37 Ga0070707_100046508 3300005468 Bacteria 4153
38 Ga0070698_100003016 3300005471 Bacteria 18549
39 Ga0070698_100005818 3300005471 Bacteria 13491
40 Ga0070698_100026167 3300005471 Bacteria 6074
41 Ga0070699_100001091 3300005518 Bacteria 25262
42 Ga0070699_100087965 3300005518 Bacteria 2713
43 Ga0070679_100000014 3300005530 Bacteria 150481
44 Ga0070679_100029932 3300005530 Bacteria 5372
45 Ga0070697_100002447 3300005536 Bacteria 14293
46 Ga0070697_100055761 3300005536 Bacteria 3213
47 Ga0070672_100005071 3300005543 Bacteria 8687
48 Ga0070696_100032399 3300005546 Bacteria 3585
49 Ga0070693_100002974 3300005547 Bacteria 7842
50 Ga0070693_100005960 3300005547 Bacteria 5890
51 Ga0070665_100001149 3300005548 Bacteria 32554
52 Ga0070704_100026810 3300005549 Bacteria 3813
53 Ga0068855_100029893 3300005563 Bacteria 6516
54 Ga0070664_100026406 3300005564 Bacteria 4817
55 Ga0068857_100001666 3300005577 Bacteria 17834
56 Ga0068856_100123170 3300005614 Unclassified 2595
57 Ga0068859_100006941 3300005617 Bacteria 11499
58 Ga0068859_100007940 3300005617 Bacteria 10765
59 Ga0068859_100026242 3300005617 Bacteria 5842
60 Ga0068859_100061736 3300005617 Bacteria 3776
61 Ga0068859_100068758 3300005617 Bacteria 3576
62 Ga0068864_100011319 3300005618 Bacteria 7372
63 Ga0068864_100014332 3300005618 Bacteria 6585
64 Ga0068864_100047022 3300005618 Bacteria 3704
65 Ga0068861_100015666 3300005719 Bacteria 5349
66 Ga0068863_100012019 3300005841 Bacteria 8365
67 Ga0068863_100021431 3300005841 Bacteria 6168
68 Ga0068863_100026344 3300005841 Bacteria 5548
69 Ga0068858_100036490 3300005842 Bacteria 4559
70 Ga0081539_10000612 3300005985 Bacteria 72310
71 Ga0075365_10002080 3300006038 Bacteria 9560
72 Ga0075433_10090517 3300006852 Bacteria 2704
73 Ga0075434_100029373 3300006871 Bacteria 5408
74 Ga0075434_100069526 3300006871 Bacteria 3510
75 Ga0097620_100006941 3300006931 Bacteria 11499
76 Ga0097620_100007940 3300006931 Bacteria 10765
77 Ga0097620_100026241 3300006931 Bacteria 5842
78 Ga0097620_100061739 3300006931 Bacteria 3776
79 Ga0097620_100068759 3300006931 Bacteria 3576
80 Ga0075435_100053198 3300007076 Bacteria 3264
81 Ga0105240_10000974 3300009093 Bacteria 51020
82 Ga0111539_10002911 3300009094 Bacteria 22707
83 Ga0111539_10027678 3300009094 Bacteria 6925
84 Ga0114129_10003934 3300009147 Bacteria 20979
85 Ga0114129_10091416 3300009147 Bacteria 4217
86 Ga0105242_10000502 3300009176 Bacteria 30880
87 Ga0105242_10011412 3300009176 Bacteria 6830
88 Ga0105242_10048803 3300009176 Bacteria 3442
89 Ga0105248_10020931 3300009177 Bacteria 7249
90 Ga0105248_10043923 3300009177 Bacteria 5012
91 Ga0105248_10048725 3300009177 Bacteria 4752
92 Ga0105248_10085710 3300009177 Bacteria 3545
93 Ga0105248_10097218 3300009177 Bacteria 3318
94 Ga0105238_10016965 3300009551 Bacteria 7390
95 Ga0105249_10004916 3300009553 Bacteria 11532
96 Ga0157373_10015347 3300013100 Bacteria 5599
97 Ga0157374_10002801 3300013296 Bacteria 14643
98 Ga0157378_10010252 3300013297 Bacteria 8180
99 Ga0163162_10002133 3300013306 Bacteria 18561
100 Ga0163162_10006831 3300013306 Bacteria 11069
101 Ga0157372_10151175 3300013307 Bacteria 2680
102 Ga0163163_10000208 3300014325 Bacteria 60820
103 Ga0163163_10005597 3300014325 Bacteria 10884
104 Ga0163163_10018075 3300014325 Bacteria 6589
105 Ga0163163_10018392 3300014325 Bacteria 6540
106 Ga0163163_10023641 3300014325 Bacteria 5835
107 Ga0157379_10018679 3300014968 Bacteria 6112
108 Ga0213875_10003952 3300021388 Bacteria 8281
109 Ga0209233_1001689 3300025261 Bacteria 8572
110 Ga0207710_10000506 3300025900 Bacteria 24282
111 Ga0207699_10001606 3300025906 Bacteria 10736
112 Ga0207645_10023081 3300025907 Bacteria 4043
113 Ga0207643_10000377 3300025908 Bacteria 29969
114 Ga0207684_10000150 3300025910 Bacteria 121849
115 Ga0207684_10000258 3300025910 Bacteria 78672
116 Ga0207684_10016097 3300025910 Bacteria 6424
117 Ga0207684_10043276 3300025910 Bacteria 3817
118 Ga0207707_10000016 3300025912 Bacteria 256002
119 Ga0207707_10015800 3300025912 Bacteria 6581
120 Ga0207695_10002216 3300025913 Bacteria 29237
121 Ga0207663_10000120 3300025916 Bacteria 38145
122 Ga0207660_10000079 3300025917 Bacteria 51036
123 Ga0207660_10056764 3300025917 Bacteria 2802
124 Ga0207652_10000372 3300025921 Bacteria 46683
125 Ga0207646_10000771 3300025922 Bacteria 41498
126 Ga0207646_10001876 3300025922 Bacteria 25349
127 Ga0207646_10011829 3300025922 Bacteria 8423
128 Ga0207650_10000011 3300025925 Bacteria 450115
129 Ga0207650_10020087 3300025925 Bacteria 4705
130 Ga0207644_10028126 3300025931 Bacteria 3889
131 Ga0207690_10027169 3300025932 Bacteria 3614
132 Ga0207706_10009322 3300025933 Bacteria 9012
133 Ga0207686_10000012 3300025934 Bacteria 209763
134 Ga0207686_10037327 3300025934 Bacteria 2931
135 Ga0207670_10000587 3300025936 Bacteria 20022
136 Ga0207665_10012967 3300025939 Bacteria 5480
137 Ga0207711_10009921 3300025941 Bacteria 7916
138 Ga0207711_10054357 3300025941 Bacteria 3436
139 Ga0207711_10063403 3300025941 Bacteria 3190
140 Ga0207651_10006241 3300025960 Bacteria 6212
141 Ga0207651_10010778 3300025960 Bacteria 5082
142 Ga0207712_10015875 3300025961 Bacteria 4866
143 Ga0207641_10023009 3300026088 Bacteria 5133
144 Ga0207641_10077405 3300026088 Bacteria 2878
145 Ga0207676_10006070 3300026095 Bacteria 8524
146 Ga0207676_10009008 3300026095 Bacteria 7103
147 Ga0207676_10018501 3300026095 Bacteria 5065
148 Ga0207674_10000023 3300026116 Bacteria 157752
149 Ga0207675_100025576 3300026118 Bacteria 5494
150 Ga0207683_10070878 3300026121 Bacteria 3080
151 Ga0207683_10077210 3300026121 Bacteria 2949
152 Ga0268266_10003761 3300028379 Bacteria 14894
153 Ga0268265_10062626 3300028380 Bacteria 2859
154 Ga0265762_1002058 3300030760 Bacteria 3668
155 Ga0307412_10010599 3300031911 Bacteria 5312
156 Ga0307416_100084001 3300032002 Bacteria 2704
157 Ga0436364_0315894 3300037853 Bacteria 10241
158 Ga0451577_0000031 3300042876 Bacteria 388524
159 Ga0453684_0008277 3300044712 Bacteria 18743
160 Ga0453684_0048725 3300044712 Bacteria 5595
161 Ga0495664_0021256 3300046477 Bacteria 3749
162 Ga0495668_0001944 3300046616 Bacteria 18380
163 Ga0496102_0097994 3300048905 Bacteria 2720
164 Ga0496104_0018498 3300048907 Bacteria 6357
165 Ga0496106_0027061 3300048909 Bacteria 4270
166 Ga0496109_0011627 3300048912 Bacteria 7570
167 Ga0496110_0012962 3300048913 Bacteria 6875
168 Ga0496111_0014583 3300048914 Bacteria 5374
169 Ga0496112_0000542 3300048915 Bacteria 25877
170 Ga0496112_0085602 3300048915 Bacteria 3119
171 Ga0496114_0007262 3300048917 Bacteria 8752
172 Ga0496115_0000688 3300048918 Bacteria 25056
173 Ga0501291_001584 3300049514 Bacteria 2651
174 Ga0501034_0030857 3300049571 Bacteria 5447
175 Ga0501036_0034194 3300049572 Bacteria 4300
176 Ga0501037_0022280 3300049573 Bacteria 4687
177 Ga0501040_0037225 3300049576 Bacteria 3305
178 Ga0501043_0000493 3300049579 Bacteria 35390
179 Ga0501046_0011036 3300049580 Bacteria 7742
180 Ga0501047_0000868 3300049581 Bacteria 30874
181 Ga0501073_0010007 3300049589 Bacteria 6973
182 Ga0501217_000563 3300049661 Bacteria 6218
183 Ga0501230_002202 3300049667 Bacteria 2460
184 Ga0501257_003825 3300049686 Bacteria 3257
185 Ga0501045_0026070 3300049824 Bacteria 4202
186 nmdc:mga09592_78692_c1 3300050508 Bacteria 2806
187 nmdc:mga0n895_41654_c1 3300050512 Bacteria 4466
188 nmdc:mga0n895_59325_c1 3300050512 Bacteria 3775
189 nmdc:mga0rr50_72895_c1 3300050513 Bacteria 2624
190 nmdc:mga0a205_4270_c1 3300050515 Bacteria 12830
191 nmdc:mga0a205_54134_c1 3300050515 Bacteria 3874
192 Ga0501084_0002548 3300054114 Bacteria 14685
193 Ga0501084_0028193 3300054114 Bacteria 4692
194 Ga0501084_0097452 3300054114 Bacteria 2469
195 Ga0163163_10073119
196 CNAas_1000401
197 JGI24751J29686_10000012
198 Ga0065714_10064422
199 Ga0065712_10000288
200 Ga0065712_10067728
201 Ga0065715_10000279
202 Ga0065715_10006878
203 Ga0065715_10108732
204 Ga0070690_100028959
205 Ga0070670_100000174
206 Ga0070670_100002571
207 Ga0070680_100000879
208 Ga0070680_100047667
209 Ga0068868_100046280
210 Ga0068868_100049137
211 Ga0070689_100057047
212 Ga0070669_100040913
213 Ga0070671_100039309
214 Ga0070671_100043188
215 Ga0070673_100010978
216 Ga0070688_100000875
217 Ga0070659_100003982
218 Ga0070667_100116685
219 Ga0070711_100000169
220 Ga0070705_100046601
221 Ga0070694_100032813
222 Ga0070708_100002206
223 Ga0070678_100047079
224 Ga0070681_10000128
225 Ga0070681_10019402
226 Ga0070685_10007279
227 Ga0070706_100011737
228 Ga0070706_100036502
229 Ga0070706_100103005
230 Ga0070707_100004887
231 Ga0070707_100046508
232 Ga0070698_100003016
233 Ga0070698_100005818
234 Ga0070698_100026167
235 Ga0070699_100001091
236 Ga0070699_100087965
237 Ga0070679_100000014
238 Ga0070679_100029932
239 Ga0070697_100002447
240 Ga0070697_100055761
241 Ga0070672_100005071
242 Ga0070696_100032399
243 Ga0070693_100002974
244 Ga0070693_100005960
245 Ga0070665_100001149
246 Ga0070704_100026810
247 Ga0068855_100029893
248 Ga0070664_100026406
249 Ga0068857_100001666
250 Ga0068856_100123170
251 Ga0068859_100006941
252 Ga0068859_100007940
253 Ga0068859_100026242
254 Ga0068859_100061736
255 Ga0068859_100068758
256 Ga0068864_100011319
257 Ga0068864_100014332
258 Ga0068864_100047022
259 Ga0068861_100015666
260 Ga0068863_100012019
261 Ga0068863_100021431
262 Ga0068863_100026344
263 Ga0068858_100036490
264 Ga0081539_10000612
265 Ga0075365_10002080
266 Ga0075433_10090517
267 Ga0075434_100029373
268 Ga0075434_100069526
269 Ga0097620_100006941
270 Ga0097620_100007940
271 Ga0097620_100026241
272 Ga0097620_100061739
273 Ga0097620_100068759
274 Ga0075435_100053198
275 Ga0105240_10000974
276 Ga0111539_10002911
277 Ga0111539_10027678
278 Ga0114129_10003934
279 Ga0114129_10091416
280 Ga0105242_10000502
281 Ga0105242_10011412
282 Ga0105242_10048803
283 Ga0105248_10020931
284 Ga0105248_10043923
285 Ga0105248_10048725
286 Ga0105248_10085710
287 Ga0105248_10097218
288 Ga0105238_10016965
289 Ga0105249_10004916
290 Ga0157373_10015347
291 Ga0157374_10002801
292 Ga0157378_10010252
293 Ga0163162_10002133
294 Ga0163162_10006831
295 Ga0157372_10151175
296 Ga0163163_10000208
297 Ga0163163_10005597
298 Ga0163163_10018075
299 Ga0163163_10018392
300 Ga0163163_10023641
301 Ga0157379_10018679
302 Ga0213875_10003952
303 Ga0209233_1001689
304 Ga0207710_10000506
305 Ga0207699_10001606
306 Ga0207645_10023081
307 Ga0207643_10000377
308 Ga0207684_10000150
309 Ga0207684_10000258
310 Ga0207684_10016097
311 Ga0207684_10043276
312 Ga0207707_10000016
313 Ga0207707_10015800
314 Ga0207695_10002216
315 Ga0207663_10000120
316 Ga0207660_10000079
317 Ga0207660_10056764
318 Ga0207652_10000372
319 Ga0207646_10000771
320 Ga0207646_10001876
321 Ga0207646_10011829
322 Ga0207650_10000011
323 Ga0207650_10020087
324 Ga0207644_10028126
325 Ga0207690_10027169
326 Ga0207706_10009322
327 Ga0207686_10000012
328 Ga0207686_10037327
329 Ga0207670_10000587
330 Ga0207665_10012967
331 Ga0207711_10009921
332 Ga0207711_10054357
333 Ga0207711_10063403
334 Ga0207651_10006241
335 Ga0207651_10010778
336 Ga0207712_10015875
337 Ga0207641_10023009
338 Ga0207641_10077405
339 Ga0207676_10006070
340 Ga0207676_10009008
341 Ga0207676_10018501
342 Ga0207674_10000023
343 Ga0207675_100025576
344 Ga0207683_10070878
345 Ga0207683_10077210
346 Ga0268266_10003761
347 Ga0268265_10062626
348 Ga0265762_1002058
349 Ga0307412_10010599
350 Ga0307416_100084001
351 Ga0436364_0315894
352 Ga0451577_0000031
353 Ga0453684_0008277
354 Ga0453684_0048725
355 Ga0495664_0021256
356 Ga0495668_0001944
357 Ga0496102_0097994
358 Ga0496104_0018498
359 Ga0496106_0027061
360 Ga0496109_0011627
361 Ga0496110_0012962
362 Ga0496111_0014583
363 Ga0496112_0000542
364 Ga0496112_0085602
365 Ga0496114_0007262
366 Ga0496115_0000688
367 Ga0501291_001584
368 Ga0501034_0030857
369 Ga0501036_0034194
370 Ga0501037_0022280
371 Ga0501040_0037225
372 Ga0501043_0000493
373 Ga0501046_0011036
374 Ga0501047_0000868
375 Ga0501073_0010007
376 Ga0501217_000563
377 Ga0501230_002202
378 Ga0501257_003825
379 Ga0501045_0026070
380 nmdc:mga09592_78692_c1
381 nmdc:mga0n895_41654_c1
382 nmdc:mga0n895_59325_c1
383 nmdc:mga0rr50_72895_c1
384 nmdc:mga0a205_4270_c1
385 nmdc:mga0a205_54134_c1
386 Ga0501084_0002548
387 Ga0501084_0028193
388 Ga0501084_0097452

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00326

Peptidase_S9

Prolyl oligopeptidase family

566

781

0.97

PF02897

Peptidase_S9_N

Prolyl oligopeptidase, N-terminal beta-propeller domain

159

555

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
1e5t-assembly1.cif.gz_A prolyl oligopeptidase from porcine brain, mutant 0.9734 24 647
1uop-assembly1.cif.gz_A prolyl oligopeptidase from porcine brain, s554a mutant with bound peptide ligand gly-phe-glu-pro 0.9727 24 647
3ddu-assembly1.cif.gz_A prolyl oligopeptidase with gsk552 0.9719 24 647
1h2y-assembly1.cif.gz_A prolyl oligopeptidase from porcine brain, y473f mutant with covalently bound inhibitor z-pro-prolinal 0.9704 24 647
1o6f-assembly1.cif.gz_A prolyl oligopeptidase from porcine brain, d641a mutant with bound peptide ligand suc-gly-pro 0.97 24 647
ID Description Score Start End Superfamily
af_F4HSS5_81_441_2.130.10.120 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;Prolyl oligopeptidase, N-terminal domain 0.9575 92 410 2.130.10.120
af_P24555_408_681_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.9554 413 645 3.40.50.1820
af_Q651Z3_473_784_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.9318 413 648 3.40.50.1820
af_B8JJX2_410_679_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.9307 407 644 3.40.50.1820
af_Q9V9P5_95_443_2.130.10.120 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;Prolyl oligopeptidase, N-terminal domain 0.9297 92 410 2.130.10.120
ID Description Score Start End GO Terms
AF-A0A7Y5KFX0-F1-model_v4 Peptidase S9A N-terminal domain-containing protein 0.9933 247 377 GO:0004252
GO:0005829
GO:0016020
GO:0070012
AF-A0A1I8AI13-F1-model_v4 Prolyl endopeptidase (EC 3.4.21.-) 0.9859 450 569 GO:0004252
GO:0005829
GO:0006508
GO:0070012
AF-A0A7W1QU07-F1-model_v4 prolyl oligopeptidase (EC 3.4.21.26) 0.9818 116 648 GO:0004252
GO:0005829
GO:0006508
GO:0070012
AF-T1B3J7-F1-model_v4 Prolyl oligopeptidase 0.9818 24 278 GO:0004252
GO:0005829
GO:0070012
AF-A0A3L7MV47-F1-model_v4 prolyl oligopeptidase (EC 3.4.21.26) 0.9817 453 645 GO:0004252
GO:0005829
GO:0006508
GO:0070012

Map