F298462

General Info

Members Datasets Scaffolds Average Seq Length
194 104 194 420

Family's Representative Sequence

Representative Sequence 3300006051|Ga0075364_10001443|Ga0075364_100014436
Length 482
Sequence MARQPHDPATPLRDDERAGVGDLLDEVTFDDASPLAGSDDRVDDGHRGAFGEFGGESGGLIDRSFRERIVLVGVTLPPGDDEETERLLDELALLVDTAGADAVDRVVQRRSAPDKATYLGSGKAAELRDICERVDADTVVFDDELSPAQQYNLEKLLGRTAIDRTAVILDIFGQNAHSLEGKAQVELAQLRYRLPRLRSRGANFDQQSGRIGTRQGGGESKLEIDRRRILRRIHRLEAELRTIAHNRGVQRKAQKRSRLKNVAIVGYTNAGKSTLLNCLTEAGVLVEDRLFATLDATTRRLELPGGEAVLLSDTVGFITKLPHGLVEAFKSTLEVVTDADLLVHVVDSSGPDPLANMAAVRDVLHEIGADGVEELLVFNKSDLDPDEAKRLVHAHAGSVAVSARTGDGFEDLLRTVGDRLRVRNLVVELLVPFARGDVLASVHREGEVLAEDADELGMRVRARLEPASAHRLREWVVAPASS

Samples

Sample ID Description Type Environment
1 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
2 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
3 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
4 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
5 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
6 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
7 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
8 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
9 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
10 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
11 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
12 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
13 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
14 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
15 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
16 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
17 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
18 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
19 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
20 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
21 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
25 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
26 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
27 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
28 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
29 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
30 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
31 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
32 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
33 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
34 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
35 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
36 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
37 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
38 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
39 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
40 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
41 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
42 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
43 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
44 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
45 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
46 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
47 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
48 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
49 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
50 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
51 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
52 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
53 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
54 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
55 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
56 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
57 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
58 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
59 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
60 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
61 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
62 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
63 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
64 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
65 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
66 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
67 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
68 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
69 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
70 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
71 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
72 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
73 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
74 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
75 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
76 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
77 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
78 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
79 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
80 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
81 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
82 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
83 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
84 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
85 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
86 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
87 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
88 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
89 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
90 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
91 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
92 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
93 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
94 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
95 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
96 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
97 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
98 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
99 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
100 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
101 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
102 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
103 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
104 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.7
Nodule 0
Rhizoplane 2.06
Rhizosphere 90.21
Stem 0
Stem Tuber 0
Unclassified 1.03

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25407J50210_10000318 3300003373 Bacteria 8917
2 Ga0070671_100005986 3300005355 Bacteria 9693
3 Ga0070713_100028576 3300005436 Bacteria 4404
4 Ga0070710_10012921 3300005437 Bacteria 4163
5 Ga0070681_10173473 3300005458 Bacteria 2078
6 Ga0070697_100131554 3300005536 Bacteria 2099
7 Ga0081455_10002256 3300005937 Bacteria 22967
8 Ga0081455_10173814 3300005937 Bacteria 1638
9 Ga0081538_10000498 3300005981 Bacteria 43866
10 Ga0081538_10002793 3300005981 Bacteria 16726
11 Ga0075365_10002549 3300006038 Bacteria 8984
12 Ga0075365_10084976 3300006038 Bacteria 2149
13 Ga0075365_10116010 3300006038 Bacteria 1844
14 Ga0075364_10001443 3300006051 Bacteria 12892
15 Ga0075367_10071590 3300006178 Bacteria 2086
16 Ga0075428_100001552 3300006844 Bacteria 24593
17 Ga0075428_100006582 3300006844 Bacteria 12923
18 Ga0075430_100002592 3300006846 Bacteria 15086
19 Ga0075430_100044697 3300006846 Bacteria 3744
20 Ga0075430_100111647 3300006846 Bacteria 2280
21 Ga0075431_100010603 3300006847 Bacteria 9268
22 Ga0075431_100021796 3300006847 Bacteria 6550
23 Ga0075431_100037013 3300006847 Bacteria 5027
24 Ga0075429_100000255 3300006880 Bacteria 36827
25 Ga0075429_100004811 3300006880 Bacteria 11625
26 Ga0111539_10001536 3300009094 Bacteria 30730
27 Ga0114129_10020368 3300009147 Bacteria 9435
28 Ga0114129_10062385 3300009147 Bacteria 5207
29 Ga0157369_10043727 3300013105 Bacteria 4881
30 Ga0157378_10209594 3300013297 Bacteria 1847
31 Ga0224572_1003871 3300024225 Bacteria 2560
32 Ga0207707_10062425 3300025912 Bacteria 3242
33 Ga0207700_10074879 3300025928 Bacteria 2621
34 Ga0207644_10005936 3300025931 Bacteria 7960
35 Ga0207428_10141864 3300027907 Bacteria 1833
36 Ga0268265_10093113 3300028380 Bacteria 2414
37 Ga0265327_10000231 3300031251 Bacteria 113114
38 Ga0316576_10008808 3300031727 Bacteria 6469
39 Ga0316576_10188027 3300031727 Bacteria 1557
40 Ga0316577_10009592 3300031733 Bacteria 5211
41 Ga0307409_100098289 3300031995 Bacteria 2420
42 Ga0307415_100024348 3300032126 Bacteria 3778
43 Ga0373930_0002842 3300034816 Bacteria 2714
44 Ga0373928_0011877 3300035084 Bacteria 1731
45 Ga0373929_0000352 3300035085 Bacteria 8573
46 Ga0373932_0000418 3300035112 Bacteria 12995
47 Ga0316574_0036764 3300035398 Bacteria 2999
48 Ga0316574_0057094 3300035398 Bacteria 2443
49 Ga0373931_0000010 3300035691 Bacteria 334069
50 Ga0373931_0000183 3300035691 Bacteria 27090
51 Ga0316582_0031989 3300036647 Bacteria 3220
52 Ga0400483_175266 3300039062 Bacteria 2950
53 Ga0436360_0017448 3300039438 Bacteria 1550
54 Ga0451837_0842967 3300041494 Bacteria 2964
55 Ga0439450_000175 3300042008 Bacteria 7396
56 Ga0439434_0011009 3300042435 Bacteria 2673
57 Ga0466960_0091708 3300044901 Bacteria 1550
58 Ga0495653_0029924 3300046463 Bacteria 4340
59 Ga0495608_0055206 3300046511 Bacteria 2625
60 Ga0495667_0021649 3300046559 Bacteria 4338
61 Ga0495667_0040072 3300046559 Bacteria 3112
62 Ga0495634_0031638 3300046642 Bacteria 3643
63 Ga0495658_0095724 3300046683 Bacteria 1765
64 Ga0495658_0131846 3300046683 Bacteria 1522
65 Ga0495613_0017283 3300046689 Bacteria 5375
66 Ga0495672_0017617 3300047320 Bacteria 4774
67 Ga0495614_0065487 3300048089 Bacteria 1563
68 Ga0496104_0090861 3300048907 Bacteria 2918
69 Ga0496105_0109979 3300048908 Bacteria 2275
70 Ga0496114_0057184 3300048917 Bacteria 3256
71 Ga0496115_0007356 3300048918 Bacteria 8101
72 Ga0501031_0051208 3300049568 Bacteria 2689
73 Ga0501031_0084805 3300049568 Bacteria 2065
74 Ga0501032_0008024 3300049569 Bacteria 7696
75 Ga0501033_0001481 3300049570 Bacteria 20792
76 Ga0501033_0122762 3300049570 Bacteria 1884
77 Ga0501034_0001912 3300049571 Bacteria 26339
78 Ga0501034_0008781 3300049571 Bacteria 10634
79 Ga0501034_0014954 3300049571 Bacteria 7982
80 Ga0501034_0020312 3300049571 Bacteria 6782
81 Ga0501034_0028758 3300049571 Bacteria 5655
82 Ga0501034_0057433 3300049571 Bacteria 3913
83 Ga0501034_0070561 3300049571 Bacteria 3505
84 Ga0501034_0200982 3300049571 Bacteria 1951
85 Ga0501034_0214189 3300049571 Bacteria 1881
86 Ga0501036_0008337 3300049572 Bacteria 8491
87 Ga0501037_0004595 3300049573 Bacteria 10034
88 Ga0501038_0002886 3300049574 Bacteria 16035
89 Ga0501038_0011372 3300049574 Bacteria 8123
90 Ga0501038_0099791 3300049574 Bacteria 2420
91 Ga0501039_0000991 3300049575 Bacteria 20671
92 Ga0501039_0155918 3300049575 Bacteria 1794
93 Ga0501040_0016621 3300049576 Bacteria 4875
94 Ga0501040_0023381 3300049576 Bacteria 4144
95 Ga0501040_0055340 3300049576 Bacteria 2720
96 Ga0501041_0004578 3300049577 Bacteria 8022
97 Ga0501041_0026038 3300049577 Bacteria 3516
98 Ga0501041_0053233 3300049577 Bacteria 2468
99 Ga0501042_0001157 3300049578 Bacteria 15263
100 Ga0501042_0138935 3300049578 Bacteria 1751
101 Ga0501043_0013944 3300049579 Bacteria 6288
102 Ga0501046_0004248 3300049580 Bacteria 13038
103 Ga0501046_0121733 3300049580 Bacteria 1985
104 Ga0501046_0189571 3300049580 Bacteria 1534
105 Ga0501048_0009206 3300049582 Bacteria 7421
106 Ga0501048_0015719 3300049582 Bacteria 5584
107 Ga0501048_0101380 3300049582 Bacteria 2031
108 Ga0501048_0118040 3300049582 Bacteria 1874
109 Ga0501067_0007432 3300049583 Bacteria 6087
110 Ga0501068_0006338 3300049584 Bacteria 6518
111 Ga0501068_0089083 3300049584 Bacteria 1902
112 Ga0501069_0000015 3300049585 Bacteria 144828
113 Ga0501069_0006045 3300049585 Bacteria 6320
114 Ga0501069_0026197 3300049585 Bacteria 3193
115 Ga0501070_0000005 3300049586 Bacteria 250033
116 Ga0501070_0000527 3300049586 Bacteria 35102
117 Ga0501070_0001877 3300049586 Bacteria 18571
118 Ga0501070_0239052 3300049586 Bacteria 1487
119 Ga0501071_0003693 3300049587 Bacteria 9601
120 Ga0501071_0018503 3300049587 Bacteria 4825
121 Ga0501071_0029327 3300049587 Bacteria 3882
122 Ga0501071_0103087 3300049587 Bacteria 2104
123 Ga0501072_0003905 3300049588 Bacteria 11277
124 Ga0501072_0043879 3300049588 Bacteria 3515
125 Ga0501073_0000661 3300049589 Bacteria 24171
126 Ga0501073_0002444 3300049589 Bacteria 13872
127 Ga0501074_0023785 3300049590 Bacteria 4454
128 Ga0501074_0024229 3300049590 Bacteria 4410
129 Ga0501075_0004625 3300049591 Bacteria 9341
130 Ga0501075_0023542 3300049591 Bacteria 4511
131 Ga0501075_0030492 3300049591 Bacteria 3995
132 Ga0501075_0139930 3300049591 Bacteria 1844
133 Ga0501076_0014803 3300049592 Bacteria 5883
134 Ga0501076_0036479 3300049592 Bacteria 3852
135 Ga0501076_0038984 3300049592 Bacteria 3730
136 Ga0501076_0094946 3300049592 Bacteria 2401
137 Ga0501077_0000309 3300049593 Bacteria 28993
138 Ga0501077_0083950 3300049593 Bacteria 2019
139 Ga0501079_0012824 3300049741 Bacteria 6398
140 Ga0501079_0027339 3300049741 Bacteria 4373
141 Ga0501079_0053088 3300049741 Bacteria 3127
142 Ga0501080_0028647 3300049742 Bacteria 5184
143 Ga0501080_0179107 3300049742 Bacteria 1951
144 Ga0501081_0002574 3300049743 Bacteria 11456
145 Ga0501081_0005903 3300049743 Bacteria 7921
146 Ga0501083_0012936 3300049744 Bacteria 5830
147 Ga0501035_0178554 3300049822 Bacteria 1830
148 Ga0501044_0000493 3300049823 Bacteria 47877
149 Ga0501044_0002003 3300049823 Bacteria 23505
150 Ga0501044_0206104 3300049823 Bacteria 1923
151 Ga0501045_0003270 3300049824 Bacteria 11075
152 Ga0501045_0058079 3300049824 Bacteria 2832
153 nmdc:mga0yw44_102180_c1 3300050492 Bacteria 1827
154 nmdc:mga0yw44_22070_c1 3300050492 Bacteria 3562
155 nmdc:mga0yw44_2342_c1 3300050492 Bacteria 8027
156 nmdc:mga06z11_19149_c1 3300050494 Bacteria 2850
157 nmdc:mga05p37_102224_c1 3300050507 Bacteria 3529
158 nmdc:mga05p37_11430_c1 3300050507 Bacteria 10569
159 nmdc:mga05p37_82509_c1 3300050507 Bacteria 3961
160 nmdc:mga09592_15592_c1 3300050508 Bacteria 6210
161 nmdc:mga09592_36286_c1 3300050508 Bacteria 4128
162 nmdc:mga09592_80207_c1 3300050508 Bacteria 2779
163 nmdc:mga09592_80756_c1 3300050508 Bacteria 2769
164 nmdc:mga0qj67_173565_c1 3300050509 Bacteria 1751
165 nmdc:mga0qj67_180005_c1 3300050509 Bacteria 1717
166 nmdc:mga0qj67_19741_c1 3300050509 Bacteria 5153
167 nmdc:mga0qj67_52855_c1 3300050509 Bacteria 3216
168 nmdc:mga06r32_2333_c1 3300050510 Bacteria 17005
169 nmdc:mga06r32_28088_c1 3300050510 Bacteria 5262
170 nmdc:mga06r32_29313_c1 3300050510 Bacteria 5157
171 nmdc:mga06r32_4818_c1 3300050510 Bacteria 12149
172 nmdc:mga06r32_63723_c1 3300050510 Bacteria 3554
173 nmdc:mga08y16_39408_c1 3300050511 Bacteria 4958
174 nmdc:mga08y16_55919_c1 3300050511 Bacteria 4124
175 Ga0495601_0022408 3300053077 Bacteria 3877
176 Ga0500635_0025542 3300053080 Bacteria 1861
177 Ga0495595_0033446 3300053084 Bacteria 2320
178 Ga0495595_0040545 3300053084 Bacteria 2128
179 Ga0495619_0069477 3300053085 Bacteria 2354
180 Ga0500566_0002385 3300053094 Bacteria 11114
181 Ga0500568_0000043 3300053139 Bacteria 126766
182 Ga0500616_0008520 3300053153 Bacteria 6357
183 Ga0501084_0004786 3300054114 Bacteria 11064
184 Ga0501084_0023942 3300054114 Bacteria 5094
185 Ga0501084_0042591 3300054114 Bacteria 3797
186 Ga0501084_0054477 3300054114 Bacteria 3346
187 Ga0501082_0002097 3300060353 Bacteria 17560
188 Ga0501082_0036322 3300060353 Bacteria 4245
189 Ga0501082_0043995 3300060353 Bacteria 3852
190 Ga0501082_0188637 3300060353 Bacteria 1794
191 Ga0530510_0003183 3300061734 Bacteria 11285
192 Ga0530510_0009056 3300061734 Bacteria 6979
193 Ga0530510_0033194 3300061734 Bacteria 3716
194 Ga0530510_0158776 3300061734 Bacteria 1672

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005937 Ga0081455_10173814 Ga0081455_101738142 333
2 3300048908 Ga0496105_0109979 Ga0496105_0109979_672_1961 343
3 3300049582 Ga0501048_0101380 Ga0501048_0101380_84_1418 357
4 3300049587 Ga0501071_0103087 Ga0501071_0103087_494_1828 357
5 3300049591 Ga0501075_0139930 Ga0501075_0139930_374_1708 357
6 3300049592 Ga0501076_0038984 Ga0501076_0038984_2070_3404 357
7 3300060353 Ga0501082_0043995 Ga0501082_0043995_520_1854 357
8 3300005458 Ga0070681_10173473 Ga0070681_101734732 362
9 3300013105 Ga0157369_10043727 Ga0157369_100437274 362
10 3300025912 Ga0207707_10062425 Ga0207707_100624252 362
11 3300053077 Ga0495601_0022408 Ga0495601_0022408_122_1405 365
12 3300013297 Ga0157378_10209594 Ga0157378_102095941 366
13 3300005436 Ga0070713_100028576 Ga0070713_1000285763 369
14 3300005437 Ga0070710_10012921 Ga0070710_100129212 369
15 3300025928 Ga0207700_10074879 Ga0207700_100748792 369
16 3300048907 Ga0496104_0090861 Ga0496104_0090861_94_1392 369
17 3300048917 Ga0496114_0057184 Ga0496114_0057184_1735_3033 369
18 3300048918 Ga0496115_0007356 Ga0496115_0007356_3673_4971 369
19 3300034816 Ga0373930_0002842 Ga0373930_0002842_706_1956 373
20 3300035691 Ga0373931_0000183 Ga0373931_0000183_8735_9985 373
21 3300039438 Ga0436360_0017448 Ga0436360_0017448_84_1352 373
22 3300035084 Ga0373928_0011877 Ga0373928_0011877_412_1668 374
23 3300035085 Ga0373929_0000352 Ga0373929_0000352_4544_5800 374
24 3300035112 Ga0373932_0000418 Ga0373932_0000418_8885_10141 374
25 3300035691 Ga0373931_0000010 Ga0373931_0000010_174471_175727 374
26 3300048089 Ga0495614_0065487 Ga0495614_0065487_236_1519 374
27 3300005355 Ga0070671_100005986 Ga0070671_1000059864 375
28 3300025931 Ga0207644_10005936 Ga0207644_100059366 375
29 3300005536 Ga0070697_100131554 Ga0070697_1001315542 377
30 3300031251 Ga0265327_10000231 Ga0265327_100002314 378
31 3300049584 Ga0501068_0089083 Ga0501068_0089083_500_1831 378
32 3300049587 Ga0501071_0018503 Ga0501071_0018503_1307_2638 378
33 3300049590 Ga0501074_0023785 Ga0501074_0023785_1987_3318 378
34 3300049741 Ga0501079_0027339 Ga0501079_0027339_1571_2902 378
35 3300049743 Ga0501081_0005903 Ga0501081_0005903_6320_7651 378
36 3300053084 Ga0495595_0033446 Ga0495595_0033446_532_1833 378
37 3300053094 Ga0500566_0002385 Ga0500566_0002385_3661_4947 378
38 3300054114 Ga0501084_0023942 Ga0501084_0023942_1381_2712 378
39 3300061734 Ga0530510_0033194 Ga0530510_0033194_1005_2336 378
40 3300049580 Ga0501046_0121733 Ga0501046_0121733_299_1633 379
41 3300024225 Ga0224572_1003871 Ga0224572_10038712 380
42 3300046683 Ga0495658_0095724 Ga0495658_0095724_426_1694 380
43 3300049591 Ga0501075_0023542 Ga0501075_0023542_161_1492 380
44 3300049592 Ga0501076_0036479 Ga0501076_0036479_2198_3529 380
45 3300049824 Ga0501045_0003270 Ga0501045_0003270_4617_5948 380
46 3300050492 nmdc:mga0yw44_102180_c1 nmdc:mga0yw44_102180_c1_192_1478 380
47 3300049571 Ga0501034_0001912 Ga0501034_0001912_2856_4301 382
48 3300049588 Ga0501072_0043879 Ga0501072_0043879_1780_3063 382
49 3300050507 nmdc:mga05p37_82509_c1 nmdc:mga05p37_82509_c1_1814_3100 382
50 3300044901 Ga0466960_0091708 Ga0466960_0091708_168_1439 384
51 3300049571 Ga0501034_0200982 Ga0501034_0200982_319_1629 384
52 3300049585 Ga0501069_0026197 Ga0501069_0026197_1222_2508 386
53 3300049823 Ga0501044_0002003 Ga0501044_0002003_7722_9008 386
54 3300053139 Ga0500568_0000043 Ga0500568_0000043_120057_121334 386
55 3300046463 Ga0495653_0029924 Ga0495653_0029924_2322_3779 389
56 3300046559 Ga0495667_0021649 Ga0495667_0021649_1275_2732 389
57 3300053084 Ga0495595_0040545 Ga0495595_0040545_514_1971 389
58 3300053085 Ga0495619_0069477 Ga0495619_0069477_122_1579 389
59 3300006038 Ga0075365_10002549 Ga0075365_100025494 390
60 3300006038 Ga0075365_10084976 Ga0075365_100849762 390
61 3300050492 nmdc:mga0yw44_2342_c1 nmdc:mga0yw44_2342_c1_4021_5298 390
62 3300009094 Ga0111539_10001536 Ga0111539_1000153613 393
63 3300027907 Ga0207428_10141864 Ga0207428_101418642 393
64 3300049568 Ga0501031_0051208 Ga0501031_0051208_301_1587 393
65 3300049570 Ga0501033_0122762 Ga0501033_0122762_230_1516 393
66 3300049574 Ga0501038_0099791 Ga0501038_0099791_30_1316 393
67 3300049576 Ga0501040_0055340 Ga0501040_0055340_134_1420 393
68 3300049577 Ga0501041_0053233 Ga0501041_0053233_1030_2322 393
69 3300049578 Ga0501042_0138935 Ga0501042_0138935_168_1454 393
70 3300049580 Ga0501046_0189571 Ga0501046_0189571_181_1473 393
71 3300049582 Ga0501048_0118040 Ga0501048_0118040_491_1777 393
72 3300049586 Ga0501070_0239052 Ga0501070_0239052_184_1470 393
73 3300049591 Ga0501075_0030492 Ga0501075_0030492_817_2109 393
74 3300049592 Ga0501076_0094946 Ga0501076_0094946_207_1499 393
75 3300049824 Ga0501045_0058079 Ga0501045_0058079_699_1985 393
76 3300050511 nmdc:mga08y16_39408_c1 nmdc:mga08y16_39408_c1_162_1448 393
77 3300054114 Ga0501084_0054477 Ga0501084_0054477_332_1618 393
78 3300006844 Ga0075428_100006582 Ga0075428_1000065823 394
79 3300006846 Ga0075430_100002592 Ga0075430_10000259217 394
80 3300006847 Ga0075431_100010603 Ga0075431_1000106039 394
81 3300006847 Ga0075431_100037013 Ga0075431_1000370132 394
82 3300006880 Ga0075429_100000255 Ga0075429_10000025540 394
83 3300009147 Ga0114129_10020368 Ga0114129_100203689 394
84 3300028380 Ga0268265_10093113 Ga0268265_100931132 394
85 3300031995 Ga0307409_100098289 Ga0307409_1000982892 394
86 3300032126 Ga0307415_100024348 Ga0307415_1000243484 394
87 3300039062 Ga0400483_175266 Ga0400483_175266_1160_2611 394
88 3300041494 Ga0451837_0842967 Ga0451837_0842967_497_1972 394
89 3300047320 Ga0495672_0017617 Ga0495672_0017617_2010_3296 394
90 3300049571 Ga0501034_0008781 Ga0501034_0008781_7743_9200 394
91 3300049571 Ga0501034_0028758 Ga0501034_0028758_459_1841 394
92 3300049571 Ga0501034_0057433 Ga0501034_0057433_917_2380 394
93 3300049571 Ga0501034_0214189 Ga0501034_0214189_110_1483 394
94 3300049585 Ga0501069_0000015 Ga0501069_0000015_20220_21620 394
95 3300049586 Ga0501070_0000005 Ga0501070_0000005_175635_177035 394
96 3300049742 Ga0501080_0028647 Ga0501080_0028647_155_1555 394
97 3300050507 nmdc:mga05p37_11430_c1 nmdc:mga05p37_11430_c1_7200_8486 394
98 3300050508 nmdc:mga09592_15592_c1 nmdc:mga09592_15592_c1_4838_6124 394
99 3300050508 nmdc:mga09592_80756_c1 nmdc:mga09592_80756_c1_111_1397 394
100 3300050509 nmdc:mga0qj67_173565_c1 nmdc:mga0qj67_173565_c1_133_1419 394
101 3300050509 nmdc:mga0qj67_52855_c1 nmdc:mga0qj67_52855_c1_1861_3147 394
102 3300050510 nmdc:mga06r32_28088_c1 nmdc:mga06r32_28088_c1_3855_5141 394
103 3300050510 nmdc:mga06r32_4818_c1 nmdc:mga06r32_4818_c1_2385_3671 394
104 3300050511 nmdc:mga08y16_55919_c1 nmdc:mga08y16_55919_c1_118_1404 394
105 3300053153 Ga0500616_0008520 Ga0500616_0008520_3956_5221 394
106 3300060353 Ga0501082_0036322 Ga0501082_0036322_546_1835 394
107 3300060353 Ga0501082_0188637 Ga0501082_0188637_340_1626 394
108 3300003373 JGI25407J50210_10000318 JGI25407J50210_100003188 395
109 3300005937 Ga0081455_10002256 Ga0081455_100022569 395
110 3300005981 Ga0081538_10000498 Ga0081538_1000049828 395
111 3300005981 Ga0081538_10002793 Ga0081538_100027939 395
112 3300006038 Ga0075365_10116010 Ga0075365_101160102 395
113 3300006051 Ga0075364_10001443 Ga0075364_100014436 395
114 3300006178 Ga0075367_10071590 Ga0075367_100715901 395
115 3300006844 Ga0075428_100001552 Ga0075428_10000155224 395
116 3300006846 Ga0075430_100044697 Ga0075430_1000446973 395
117 3300006846 Ga0075430_100111647 Ga0075430_1001116472 395
118 3300006847 Ga0075431_100021796 Ga0075431_1000217965 395
119 3300006880 Ga0075429_100004811 Ga0075429_1000048116 395
120 3300009147 Ga0114129_10062385 Ga0114129_100623852 395
121 3300031727 Ga0316576_10008808 Ga0316576_100088084 395
122 3300031727 Ga0316576_10188027 Ga0316576_101880272 395
123 3300031733 Ga0316577_10009592 Ga0316577_100095924 395
124 3300035398 Ga0316574_0036764 Ga0316574_0036764_498_1832 395
125 3300035398 Ga0316574_0057094 Ga0316574_0057094_462_1766 395
126 3300036647 Ga0316582_0031989 Ga0316582_0031989_1890_3206 395
127 3300042008 Ga0439450_000175 Ga0439450_000175_4226_5521 395
128 3300042435 Ga0439434_0011009 Ga0439434_0011009_1010_2293 395
129 3300046511 Ga0495608_0055206 Ga0495608_0055206_1148_2449 395
130 3300046559 Ga0495667_0040072 Ga0495667_0040072_949_2250 395
131 3300046642 Ga0495634_0031638 Ga0495634_0031638_1200_2504 395
132 3300046683 Ga0495658_0131846 Ga0495658_0131846_30_1340 395
133 3300046689 Ga0495613_0017283 Ga0495613_0017283_1414_2718 395
134 3300049568 Ga0501031_0084805 Ga0501031_0084805_209_1516 395
135 3300049569 Ga0501032_0008024 Ga0501032_0008024_3039_4421 395
136 3300049570 Ga0501033_0001481 Ga0501033_0001481_14314_15609 395
137 3300049571 Ga0501034_0014954 Ga0501034_0014954_1783_3066 395
138 3300049571 Ga0501034_0020312 Ga0501034_0020312_1371_2753 395
139 3300049571 Ga0501034_0070561 Ga0501034_0070561_1456_2826 395
140 3300049572 Ga0501036_0008337 Ga0501036_0008337_1536_2831 395
141 3300049573 Ga0501037_0004595 Ga0501037_0004595_3298_4680 395
142 3300049574 Ga0501038_0002886 Ga0501038_0002886_13541_14836 395
143 3300049574 Ga0501038_0011372 Ga0501038_0011372_4784_6166 395
144 3300049575 Ga0501039_0000991 Ga0501039_0000991_13358_14653 395
145 3300049575 Ga0501039_0155918 Ga0501039_0155918_109_1401 395
146 3300049576 Ga0501040_0016621 Ga0501040_0016621_919_2214 395
147 3300049576 Ga0501040_0023381 Ga0501040_0023381_1257_2564 395
148 3300049577 Ga0501041_0004578 Ga0501041_0004578_5099_6394 395
149 3300049577 Ga0501041_0026038 Ga0501041_0026038_1149_2444 395
150 3300049578 Ga0501042_0001157 Ga0501042_0001157_4677_5972 395
151 3300049579 Ga0501043_0013944 Ga0501043_0013944_1731_3113 395
152 3300049580 Ga0501046_0004248 Ga0501046_0004248_4788_6083 395
153 3300049582 Ga0501048_0009206 Ga0501048_0009206_1867_3162 395
154 3300049582 Ga0501048_0015719 Ga0501048_0015719_1915_3222 395
155 3300049583 Ga0501067_0007432 Ga0501067_0007432_4062_5345 395
156 3300049584 Ga0501068_0006338 Ga0501068_0006338_4515_5798 395
157 3300049585 Ga0501069_0006045 Ga0501069_0006045_3301_4584 395
158 3300049586 Ga0501070_0000527 Ga0501070_0000527_24492_25775 395
159 3300049586 Ga0501070_0001877 Ga0501070_0001877_5393_6775 395
160 3300049587 Ga0501071_0003693 Ga0501071_0003693_990_2285 395
161 3300049587 Ga0501071_0029327 Ga0501071_0029327_1674_2957 395
162 3300049588 Ga0501072_0003905 Ga0501072_0003905_9593_10888 395
163 3300049589 Ga0501073_0000661 Ga0501073_0000661_16827_18110 395
164 3300049589 Ga0501073_0002444 Ga0501073_0002444_12153_13436 395
165 3300049590 Ga0501074_0024229 Ga0501074_0024229_1785_3167 395
166 3300049591 Ga0501075_0004625 Ga0501075_0004625_5466_6761 395
167 3300049592 Ga0501076_0014803 Ga0501076_0014803_1060_2355 395
168 3300049593 Ga0501077_0000309 Ga0501077_0000309_14024_15319 395
169 3300049593 Ga0501077_0083950 Ga0501077_0083950_675_1967 395
170 3300049741 Ga0501079_0012824 Ga0501079_0012824_247_1542 395
171 3300049741 Ga0501079_0053088 Ga0501079_0053088_1133_2416 395
172 3300049742 Ga0501080_0179107 Ga0501080_0179107_306_1589 395
173 3300049743 Ga0501081_0002574 Ga0501081_0002574_5694_6989 395
174 3300049744 Ga0501083_0012936 Ga0501083_0012936_2118_3401 395
175 3300049822 Ga0501035_0178554 Ga0501035_0178554_272_1567 395
176 3300049823 Ga0501044_0000493 Ga0501044_0000493_712_2094 395
177 3300049823 Ga0501044_0206104 Ga0501044_0206104_501_1808 395
178 3300050492 nmdc:mga0yw44_22070_c1 nmdc:mga0yw44_22070_c1_376_1731 395
179 3300050494 nmdc:mga06z11_19149_c1 nmdc:mga06z11_19149_c1_792_2294 395
180 3300050507 nmdc:mga05p37_102224_c1 nmdc:mga05p37_102224_c1_1807_3096 395
181 3300050508 nmdc:mga09592_36286_c1 nmdc:mga09592_36286_c1_2619_3908 395
182 3300050508 nmdc:mga09592_80207_c1 nmdc:mga09592_80207_c1_239_1528 395
183 3300050509 nmdc:mga0qj67_180005_c1 nmdc:mga0qj67_180005_c1_25_1314 395
184 3300050509 nmdc:mga0qj67_19741_c1 nmdc:mga0qj67_19741_c1_3141_4430 395
185 3300050510 nmdc:mga06r32_2333_c1 nmdc:mga06r32_2333_c1_10370_11659 395
186 3300050510 nmdc:mga06r32_29313_c1 nmdc:mga06r32_29313_c1_861_2150 395
187 3300050510 nmdc:mga06r32_63723_c1 nmdc:mga06r32_63723_c1_1393_2688 395
188 3300053080 Ga0500635_0025542 Ga0500635_0025542_142_1509 395
189 3300054114 Ga0501084_0004786 Ga0501084_0004786_4242_5525 395
190 3300054114 Ga0501084_0042591 Ga0501084_0042591_1377_2672 395
191 3300060353 Ga0501082_0002097 Ga0501082_0002097_5925_7220 395
192 3300061734 Ga0530510_0003183 Ga0530510_0003183_2410_3705 395
193 3300061734 Ga0530510_0009056 Ga0530510_0009056_1417_2712 395
194 3300061734 Ga0530510_0158776 Ga0530510_0158776_209_1501 395

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13167

GTP-bdg_N

GTP-binding GTPase N-terminal

85

173

0.98

PF16360

GTP-bdg_M

GTP-binding GTPase Middle Region

175

254

0.96

PF01926

MMR_HSR1

50S ribosome-binding GTPase

261

380

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
7o9k-assembly1.cif.gz_G human mitochondrial ribosome large subunit assembly intermediate with mterf4-nsun4, mrm2, mtg1, the malsu module, gtpbp5 and mtef-tu 0.8699 176 340
7of6-assembly1.cif.gz_C structure of mature human mitochondrial ribosome large subunit in complex with gtpbp6 (ptc conformation 2). 0.8254 8 391
8a57-assembly1.cif.gz_D cryo-em structure of hflxr bound to the listeria monocytogenes 50s ribosomal subunit. 0.8246 8 392
7of2-assembly1.cif.gz_C structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with gtpbp6. 0.8196 8 391
7bl6-assembly1.cif.gz_9 50s-obge-gmppnp particle 0.8168 176 337
ID Description Score Start End Superfamily
af_O33230_82_179_3.40.50.11060 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;GTPase HflX, N-terminal domain 0.986 23 117 3.40.50.11060
af_O33230_270_440_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9609 176 337 3.40.50.300
af_K7KB86_112_214_3.40.50.11060 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;GTPase HflX, N-terminal domain 0.9559 53 130 3.40.50.11060
af_P25519_16_114_3.40.50.11060 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;GTPase HflX, N-terminal domain 0.9493 23 117 3.40.50.11060
af_O33230_82_179_3.40.50.11060 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;GTPase HflX, N-terminal domain 0.9466 23 117 3.40.50.11060
ID Description Score Start End GO Terms
AF-X1G2X4-F1-model_v4 GTPase HflX N-terminal domain-containing protein 0.9824 53 132 GO:0005525
GO:0005737
GO:0043022
GO:0046872
AF-A0A6L8GDC9-F1-model_v4 GTPase HflX 0.9787 9 108 GO:0005525
GO:0005737
GO:0043022
GO:0046872
AF-A0A2V6KU26-F1-model_v4 GTPase HflX 0.9761 9 120 GO:0005525
GO:0005737
GO:0043022
GO:0046872
AF-A0A0S8GS78-F1-model_v4 GTPase HflX 0.9756 9 133 GO:0005525
GO:0005737
GO:0043022
GO:0046872
AF-A0A7Y3MGQ0-F1-model_v4 GTPase HflX 0.9752 8 133 GO:0005525
GO:0005737
GO:0043022
GO:0046872

Feature Viewer

pLDDT pTM Quality
82.83 0.75 High
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Predicted Structure (AlphaFold2)

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