F298286

General Info

Members Datasets Scaffolds Average Seq Length
194 126 388 402

Family's Representative Sequence

Representative Sequence 3300005444|Ga0070694_100023528|Ga0070694_1000235282
Length 456
Sequence MSHSEHARQWVHIGSGLFSLLLRVLTWWQAAALAATALAFNVFVLPRIGGRRLYRPVDEARGFPLGIVLYPLSVLLLILLFPSRLDIVAAAWGILAFGDGFATLVGERAAAAKAQTDRTATNDVFGLFAAVAGGRLSWNQEKTVAGTIAFMMCGGFGASALALWTRPAVTPTPDIAFVMVAPLVAAMIAGLVETIPIRLDDNISVPMTAAAVLWLATLVTPEAIEAARGDLVSNLRWAIGVNAIVSYLGYRARTVSLSGTIGGALIGVVIYTAGGWRAWLFLFLTFFAATAASKLGLKRKVLLGIEEERGGRRGAGNAFANCGVAAAAAIAGVATPYSTEAWIALVAALTAGGSDTVASEIGKAWGTSTFLVTGFGRVKAGTPGAMSLEGTAAGVVSAFALAMPGXXXLAVVVGATAGALVESVLAATLEGPGILNNDMLNFINTAVAAAVAIAIA

Samples

Sample ID Description Type Environment
1 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
2 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
3 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
13 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
14 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
17 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
18 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
21 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
22 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
23 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
28 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
29 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
30 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
31 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
32 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
33 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
34 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
35 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
36 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
37 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
38 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
39 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
40 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
41 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
42 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
43 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
44 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
45 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
47 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
48 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
50 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
51 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
53 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
54 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
55 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
56 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
57 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
58 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
59 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
60 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
61 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
62 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
82 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
85 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
86 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
87 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
88 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
89 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
90 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
91 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
92 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
93 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
94 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
95 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
96 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
97 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
98 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
99 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
100 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
101 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
102 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
103 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
104 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
105 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
106 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
107 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
108 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
109 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
110 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
112 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
113 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
114 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
115 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
116 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
117 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
118 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
119 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
120 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
121 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
122 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
123 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
124 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
125 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
126 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.55
Nodule 0
Rhizoplane 2.06
Rhizosphere 96.39
Stem 0
Stem Tuber 0
Unclassified 10.82

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070694_100023528 3300005444 Unclassified 3964
2 Ga0065707_10002000 3300005295 Bacteria 8686
3 Ga0070676_10077192 3300005328 Bacteria 2013
4 Ga0070670_100003211 3300005331 Bacteria 13494
5 Ga0070666_10014806 3300005335 Bacteria 4971
6 Ga0068868_100046365 3300005338 Bacteria 3402
7 Ga0070660_100002351 3300005339 Bacteria 12990
8 Ga0070692_10015118 3300005345 Bacteria 3643
9 Ga0070669_100021154 3300005353 Bacteria 4649
10 Ga0070675_100000253 3300005354 Bacteria 34898
11 Ga0070675_100038274 3300005354 Unclassified 3908
12 Ga0070659_100041021 3300005366 Bacteria 3617
13 Ga0070701_10006903 3300005438 Bacteria 4809
14 Ga0070700_100008741 3300005441 Bacteria 5527
15 Ga0070700_100086224 3300005441 Bacteria 2038
16 Ga0070694_100052054 3300005444 Bacteria 2766
17 Ga0070662_100014136 3300005457 Bacteria 5326
18 Ga0070681_10044735 3300005458 Bacteria 4432
19 Ga0068867_100061280 3300005459 Bacteria 2793
20 Ga0070707_100076530 3300005468 Bacteria 3228
21 Ga0070707_100187911 3300005468 Unclassified 2014
22 Ga0070699_100003877 3300005518 Bacteria 13221
23 Ga0070679_100011985 3300005530 Bacteria 8276
24 Ga0070672_100066850 3300005543 Unclassified 2847
25 Ga0070686_100000402 3300005544 Bacteria 27116
26 Ga0070695_100035687 3300005545 Bacteria 3124
27 Ga0070693_100031362 3300005547 Bacteria 2912
28 Ga0070665_100002142 3300005548 Bacteria 22040
29 Ga0070665_100002991 3300005548 Bacteria 18259
30 Ga0070665_100341179 3300005548 Bacteria 1503
31 Ga0070704_100010966 3300005549 Bacteria 5528
32 Ga0070704_100044808 3300005549 Unclassified 3076
33 Ga0068855_100004159 3300005563 Bacteria 17656
34 Ga0070664_100026617 3300005564 Bacteria 4800
35 Ga0068857_100014787 3300005577 Bacteria 6809
36 Ga0068857_100054927 3300005577 Bacteria 3535
37 Ga0068854_100016228 3300005578 Bacteria 4960
38 Ga0070702_100002245 3300005615 Bacteria 8255
39 Ga0068859_100127183 3300005617 Unclassified 2618
40 Ga0068864_100134388 3300005618 Bacteria 2226
41 Ga0068866_10012116 3300005718 Bacteria 3752
42 Ga0068866_10046476 3300005718 Bacteria 2184
43 Ga0068861_100000990 3300005719 Bacteria 17354
44 Ga0068861_100013307 3300005719 Bacteria 5756
45 Ga0068863_100185909 3300005841 Bacteria 1996
46 Ga0068858_100153707 3300005842 Bacteria 2164
47 Ga0068860_100200659 3300005843 Bacteria 1933
48 Ga0068862_100015306 3300005844 Bacteria 6371
49 Ga0068862_100028943 3300005844 Bacteria 4667
50 Ga0068862_100059529 3300005844 Bacteria 3280
51 Ga0075428_100003044 3300006844 Bacteria 18300
52 Ga0075430_100001139 3300006846 Bacteria 21210
53 Ga0075430_100043594 3300006846 Bacteria 3793
54 Ga0075430_100083840 3300006846 Bacteria 2670
55 Ga0075431_100005937 3300006847 Bacteria 12084
56 Ga0075431_100115167 3300006847 Bacteria 2775
57 Ga0075433_10061436 3300006852 Bacteria 3291
58 Ga0075433_10085979 3300006852 Bacteria 2777
59 Ga0075433_10126336 3300006852 Unclassified 2271
60 Ga0075434_100000086 3300006871 Bacteria 50533
61 Ga0075434_100006665 3300006871 Bacteria 10602
62 Ga0075434_100011887 3300006871 Bacteria 8231
63 Ga0075434_100024007 3300006871 Bacteria 5954
64 Ga0075434_100114659 3300006871 Unclassified 2708
65 Ga0075434_100308060 3300006871 Bacteria 1604
66 Ga0075436_100001792 3300006914 Bacteria 14716
67 Ga0075436_100070045 3300006914 Bacteria 2424
68 Ga0075436_100090480 3300006914 Bacteria 2127
69 Ga0097620_100127189 3300006931 Unclassified 2618
70 Ga0075435_100000174 3300007076 Bacteria 37839
71 Ga0075435_100001493 3300007076 Bacteria 15022
72 Ga0075435_100002632 3300007076 Bacteria 11957
73 Ga0075435_100043426 3300007076 Unclassified 3598
74 Ga0075435_100056887 3300007076 Bacteria 3162
75 Ga0105240_10301994 3300009093 Bacteria 1831
76 Ga0111539_10001742 3300009094 Bacteria 28901
77 Ga0111539_10007381 3300009094 Bacteria 14081
78 Ga0111539_10016736 3300009094 Bacteria 9087
79 Ga0111539_10286576 3300009094 Bacteria 1917
80 Ga0105245_10012513 3300009098 Bacteria 7384
81 Ga0105247_10028996 3300009101 Unclassified 3351
82 Ga0105247_10073076 3300009101 Bacteria 2148
83 Ga0114129_10000939 3300009147 Bacteria 38096
84 Ga0114129_10004250 3300009147 Bacteria 20239
85 Ga0114129_10015611 3300009147 Bacteria 10799
86 Ga0114129_10018568 3300009147 Bacteria 9901
87 Ga0114129_10250863 3300009147 Bacteria 2376
88 Ga0114129_10375967 3300009147 Bacteria 1877
89 Ga0105243_10028881 3300009148 Bacteria 4261
90 Ga0105241_10016171 3300009174 Bacteria 5468
91 Ga0105242_10002057 3300009176 Bacteria 15863
92 Ga0105248_10002829 3300009177 Bacteria 19252
93 Ga0105248_10108136 3300009177 Bacteria 3136
94 Ga0105249_10031781 3300009553 Unclassified 4775
95 Ga0157374_10006546 3300013296 Bacteria 9895
96 Ga0163163_10000155 3300014325 Bacteria 71598
97 Ga0157380_10037139 3300014326 Bacteria 3773
98 Ga0157379_10006235 3300014968 Bacteria 10269
99 Ga0157379_10064946 3300014968 Unclassified 3262
100 Ga0157376_10016212 3300014969 Bacteria 5650
101 Ga0157376_10098117 3300014969 Bacteria 2554
102 Ga0207680_10008067 3300025903 Bacteria 5158
103 Ga0207645_10001954 3300025907 Bacteria 16599
104 Ga0207662_10033527 3300025918 Bacteria 2994
105 Ga0207646_10071379 3300025922 Bacteria 3101
106 Ga0207681_10052896 3300025923 Bacteria 2755
107 Ga0207681_10184091 3300025923 Unclassified 1593
108 Ga0207659_10000790 3300025926 Bacteria 18724
109 Ga0207706_10084689 3300025933 Bacteria 2787
110 Ga0207686_10012436 3300025934 Bacteria 4682
111 Ga0207704_10041898 3300025938 Bacteria 2690
112 Ga0207711_10059369 3300025941 Bacteria 3293
113 Ga0207667_10220703 3300025949 Bacteria 1942
114 Ga0207640_10028302 3300025981 Bacteria 3425
115 Ga0207677_10047623 3300026023 Bacteria 2880
116 Ga0207703_10182667 3300026035 Bacteria 1852
117 Ga0207708_10004859 3300026075 Bacteria 9906
118 Ga0207641_10073244 3300026088 Bacteria 2952
119 Ga0207648_10067721 3300026089 Bacteria 3112
120 Ga0207648_10076154 3300026089 Bacteria 2924
121 Ga0207674_10019418 3300026116 Bacteria 7359
122 Ga0207675_100002719 3300026118 Bacteria 17427
123 Ga0207428_10006408 3300027907 Bacteria 10872
124 Ga0207428_10010679 3300027907 Bacteria 8190
125 Ga0207428_10042798 3300027907 Unclassified 3661
126 Ga0207428_10070567 3300027907 Unclassified 2746
127 Ga0268266_10116464 3300028379 Bacteria 2373
128 Ga0268266_10193974 3300028379 Bacteria 1856
129 Ga0268266_10255070 3300028379 Bacteria 1623
130 Ga0268265_10025016 3300028380 Bacteria 4231
131 Ga0307413_10057479 3300031824 Bacteria 2379
132 Ga0307415_100044512 3300032126 Bacteria 2968
133 Ga0373929_0001380 3300035085 Bacteria 4652
134 Ga0373934_0003609 3300035086 Bacteria 5692
135 Ga0373940_0000578 3300035088 Bacteria 5806
136 Ga0373949_0005298 3300035090 Bacteria 2883
137 Ga0373951_0002991 3300035091 Bacteria 4189
138 Ga0373952_0002807 3300035092 Bacteria 3149
139 Ga0373932_0002107 3300035112 Bacteria 5169
140 Ga0373939_0000700 3300035114 Bacteria 8299
141 Ga0373941_0000754 3300035115 Bacteria 6619
142 Ga0373953_0018120 3300035117 Bacteria 2600
143 Ga0373960_0000212 3300035121 Bacteria 10655
144 Ga0373942_0000280 3300035207 Bacteria 13821
145 Ga0373961_0001969 3300035241 Bacteria 5549
146 Ga0373962_0000486 3300035242 Bacteria 8804
147 Ga0373933_0013370 3300035724 Bacteria 4548
148 Ga0373937_0000284 3300036401 Bacteria 48546
149 Ga0373925_0166183 3300037068 Bacteria 1740
150 Ga0451577_0038335 3300042876 Bacteria 4311
151 Ga0451576_0013147 3300045051 Bacteria 9264
152 Ga0451576_0015218 3300045051 Bacteria 8532
153 Ga0495629_0049065 3300046459 Bacteria 2960
154 Ga0496102_0113779 3300048905 Bacteria 2525
155 Ga0496105_0125650 3300048908 Bacteria 2114
156 Ga0496114_0043715 3300048917 Bacteria 3715
157 Ga0496115_0095900 3300048918 Bacteria 2428
158 Ga0501040_0062866 3300049576 Bacteria 2554
159 Ga0501075_0017067 3300049591 Bacteria 5239
160 Ga0501079_0237280 3300049741 Unclassified 1425
161 nmdc:mga05p37_275_c1 3300050507 Bacteria 53593
162 nmdc:mga05p37_398701_c1 3300050507 Bacteria 1607
163 nmdc:mga05p37_53282_c2 3300050507 Bacteria 2906
164 nmdc:mga05p37_55449_c1 3300050507 Bacteria 4877
165 nmdc:mga05p37_7019_c1 3300050507 Bacteria 13274
166 nmdc:mga05p37_7337_c1 3300050507 Bacteria 13002
167 nmdc:mga09592_49941_c1 3300050508 Bacteria 3527
168 nmdc:mga0qj67_68322_c1 3300050509 Unclassified 2832
169 nmdc:mga06r32_16976_c1 3300050510 Bacteria 6641
170 nmdc:mga06r32_207198_c1 3300050510 Unclassified 1949
171 nmdc:mga08y16_10023_c1 3300050511 Bacteria 9946
172 nmdc:mga08y16_4189_c1 3300050511 Bacteria 15070
173 nmdc:mga08y16_6653_c1 3300050511 Bacteria 12126
174 nmdc:mga0n895_134557_c1 3300050512 Bacteria 2498
175 nmdc:mga0n895_169689_c1 3300050512 Bacteria 2214
176 nmdc:mga0n895_29626_c1 3300050512 Bacteria 5224
177 nmdc:mga0n895_62162_c1 3300050512 Unclassified 3690
178 nmdc:mga0n895_8_c1 3300050512 Bacteria 121439
179 nmdc:mga0rr50_12518_c1 3300050513 Bacteria 5489
180 nmdc:mga0rr50_149951_c1 3300050513 Bacteria 1883
181 nmdc:mga0rr50_23_c1 3300050513 Bacteria 116800
182 nmdc:mga0rr50_263780_c1 3300050513 Bacteria 1434
183 nmdc:mga0rr50_2711_c1 3300050513 Bacteria 10045
184 nmdc:mga0rr50_39108_c1 3300050513 Bacteria 2716
185 nmdc:mga0rr50_9166_c1 3300050513 Bacteria 6204
186 nmdc:mga08x19_1304_c1 3300050514 Bacteria 15487
187 nmdc:mga0a205_17480_c1 3300050515 Bacteria 6724
188 nmdc:mga0a205_265036_c1 3300050515 Bacteria 1595
189 nmdc:mga0a205_49396_c1 3300050515 Bacteria 4061
190 Ga0495619_0056425 3300053085 Bacteria 2604
191 Ga0500641_0000456 3300053096 Bacteria 14855
192 Ga0500616_0001775 3300053153 Bacteria 19705
193 Ga0500645_000678 3300053730 Bacteria 21271
194 Ga0501084_0091328 3300054114 Unclassified 2557
195 Ga0070694_100023528
196 Ga0065707_10002000
197 Ga0070676_10077192
198 Ga0070670_100003211
199 Ga0070666_10014806
200 Ga0068868_100046365
201 Ga0070660_100002351
202 Ga0070692_10015118
203 Ga0070669_100021154
204 Ga0070675_100000253
205 Ga0070675_100038274
206 Ga0070659_100041021
207 Ga0070701_10006903
208 Ga0070700_100008741
209 Ga0070700_100086224
210 Ga0070694_100052054
211 Ga0070662_100014136
212 Ga0070681_10044735
213 Ga0068867_100061280
214 Ga0070707_100076530
215 Ga0070707_100187911
216 Ga0070699_100003877
217 Ga0070679_100011985
218 Ga0070672_100066850
219 Ga0070686_100000402
220 Ga0070695_100035687
221 Ga0070693_100031362
222 Ga0070665_100002142
223 Ga0070665_100002991
224 Ga0070665_100341179
225 Ga0070704_100010966
226 Ga0070704_100044808
227 Ga0068855_100004159
228 Ga0070664_100026617
229 Ga0068857_100014787
230 Ga0068857_100054927
231 Ga0068854_100016228
232 Ga0070702_100002245
233 Ga0068859_100127183
234 Ga0068864_100134388
235 Ga0068866_10012116
236 Ga0068866_10046476
237 Ga0068861_100000990
238 Ga0068861_100013307
239 Ga0068863_100185909
240 Ga0068858_100153707
241 Ga0068860_100200659
242 Ga0068862_100015306
243 Ga0068862_100028943
244 Ga0068862_100059529
245 Ga0075428_100003044
246 Ga0075430_100001139
247 Ga0075430_100043594
248 Ga0075430_100083840
249 Ga0075431_100005937
250 Ga0075431_100115167
251 Ga0075433_10061436
252 Ga0075433_10085979
253 Ga0075433_10126336
254 Ga0075434_100000086
255 Ga0075434_100006665
256 Ga0075434_100011887
257 Ga0075434_100024007
258 Ga0075434_100114659
259 Ga0075434_100308060
260 Ga0075436_100001792
261 Ga0075436_100070045
262 Ga0075436_100090480
263 Ga0097620_100127189
264 Ga0075435_100000174
265 Ga0075435_100001493
266 Ga0075435_100002632
267 Ga0075435_100043426
268 Ga0075435_100056887
269 Ga0105240_10301994
270 Ga0111539_10001742
271 Ga0111539_10007381
272 Ga0111539_10016736
273 Ga0111539_10286576
274 Ga0105245_10012513
275 Ga0105247_10028996
276 Ga0105247_10073076
277 Ga0114129_10000939
278 Ga0114129_10004250
279 Ga0114129_10015611
280 Ga0114129_10018568
281 Ga0114129_10250863
282 Ga0114129_10375967
283 Ga0105243_10028881
284 Ga0105241_10016171
285 Ga0105242_10002057
286 Ga0105248_10002829
287 Ga0105248_10108136
288 Ga0105249_10031781
289 Ga0157374_10006546
290 Ga0163163_10000155
291 Ga0157380_10037139
292 Ga0157379_10006235
293 Ga0157379_10064946
294 Ga0157376_10016212
295 Ga0157376_10098117
296 Ga0207680_10008067
297 Ga0207645_10001954
298 Ga0207662_10033527
299 Ga0207646_10071379
300 Ga0207681_10052896
301 Ga0207681_10184091
302 Ga0207659_10000790
303 Ga0207706_10084689
304 Ga0207686_10012436
305 Ga0207704_10041898
306 Ga0207711_10059369
307 Ga0207667_10220703
308 Ga0207640_10028302
309 Ga0207677_10047623
310 Ga0207703_10182667
311 Ga0207708_10004859
312 Ga0207641_10073244
313 Ga0207648_10067721
314 Ga0207648_10076154
315 Ga0207674_10019418
316 Ga0207675_100002719
317 Ga0207428_10006408
318 Ga0207428_10010679
319 Ga0207428_10042798
320 Ga0207428_10070567
321 Ga0268266_10116464
322 Ga0268266_10193974
323 Ga0268266_10255070
324 Ga0268265_10025016
325 Ga0307413_10057479
326 Ga0307415_100044512
327 Ga0373929_0001380
328 Ga0373934_0003609
329 Ga0373940_0000578
330 Ga0373949_0005298
331 Ga0373951_0002991
332 Ga0373952_0002807
333 Ga0373932_0002107
334 Ga0373939_0000700
335 Ga0373941_0000754
336 Ga0373953_0018120
337 Ga0373960_0000212
338 Ga0373942_0000280
339 Ga0373961_0001969
340 Ga0373962_0000486
341 Ga0373933_0013370
342 Ga0373937_0000284
343 Ga0373925_0166183
344 Ga0451577_0038335
345 Ga0451576_0013147
346 Ga0451576_0015218
347 Ga0495629_0049065
348 Ga0496102_0113779
349 Ga0496105_0125650
350 Ga0496114_0043715
351 Ga0496115_0095900
352 Ga0501040_0062866
353 Ga0501075_0017067
354 Ga0501079_0237280
355 nmdc:mga05p37_275_c1
356 nmdc:mga05p37_398701_c1
357 nmdc:mga05p37_53282_c2
358 nmdc:mga05p37_55449_c1
359 nmdc:mga05p37_7019_c1
360 nmdc:mga05p37_7337_c1
361 nmdc:mga09592_49941_c1
362 nmdc:mga0qj67_68322_c1
363 nmdc:mga06r32_16976_c1
364 nmdc:mga06r32_207198_c1
365 nmdc:mga08y16_10023_c1
366 nmdc:mga08y16_4189_c1
367 nmdc:mga08y16_6653_c1
368 nmdc:mga0n895_134557_c1
369 nmdc:mga0n895_169689_c1
370 nmdc:mga0n895_29626_c1
371 nmdc:mga0n895_62162_c1
372 nmdc:mga0n895_8_c1
373 nmdc:mga0rr50_12518_c1
374 nmdc:mga0rr50_149951_c1
375 nmdc:mga0rr50_23_c1
376 nmdc:mga0rr50_263780_c1
377 nmdc:mga0rr50_2711_c1
378 nmdc:mga0rr50_39108_c1
379 nmdc:mga0rr50_9166_c1
380 nmdc:mga08x19_1304_c1
381 nmdc:mga0a205_17480_c1
382 nmdc:mga0a205_265036_c1
383 nmdc:mga0a205_49396_c1
384 Ga0495619_0056425
385 Ga0500641_0000456
386 Ga0500616_0001775
387 Ga0500645_000678
388 Ga0501084_0091328

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01940

DUF92

Integral membrane protein DUF92

240

449

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
5wtr-assembly2.cif.gz_F crystal structure of a prokaryotic tric channel in 0.5 m kcl 0.3934 244 420
5wtr-assembly2.cif.gz_F crystal structure of a prokaryotic tric channel in 0.5 m kcl 0.3603 244 420
4q2g-assembly1.cif.gz_A crystal structure of an intramembrane cdp-dag synthetase central for phospholipid biosynthesis (s200c/s223c, inactive mutant) 0.3514 1 180
6db1-assembly1.cif.gz_B 2.0 angstrom resolution crystal structure of n-terminal ligand-binding domain of putative methyl-accepting chemotaxis protein from salmonella enterica 0.3048 10 156
1ad6-assembly1.cif.gz_A domain a of human retinoblastoma tumor suppressor 0.2963 3 178
ID Description Score Start End Superfamily
af_P9WFR7_30_178_1.10.357.140 Mainly Alpha;Orthogonal Bundle;Tetracycline Repressor; domain 2;UbiA prenyltransferase 0.3693 282 422 1.10.357.140
af_Q21883_241_439_1.20.1640.10 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.3542 240 418 1.20.1640.10
af_Q9N2Z6_260_461_1.20.1640.10 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.3531 242 423 1.20.1640.10
af_P9WFR7_30_178_1.10.357.140 Mainly Alpha;Orthogonal Bundle;Tetracycline Repressor; domain 2;UbiA prenyltransferase 0.3527 282 422 1.10.357.140
af_Q95QL5_1_155_1.20.140.150 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3; 0.3378 23 175 1.20.140.150
ID Description Score Start End GO Terms
AF-A0A1F2TSF0-F1-model_v4 TIGR00297 family protein 0.9804 198 424 GO:0016020
AF-A0A2V8SQB2-F1-model_v4 DUF92 domain-containing protein 0.9573 10 423 GO:0016020
AF-A0A7X3Z592-F1-model_v4 deleted 0.9567 201 419
AF-A0A3N5X8N0-F1-model_v4 DUF92 domain-containing protein 0.9562 146 422 GO:0016020
AF-A0A6P0I942-F1-model_v4 TIGR00297 family protein 0.9521 227 424 GO:0016020

Map