F298043

General Info

Members Datasets Scaffolds Average Seq Length
194 158 170 249

Family's Representative Sequence

Representative Sequence 3300003771|Ga0055526_1004942|Ga0055526_10049424
Length 286
Sequence MASRAVSPKRHARATLKSVMNDHAFPLRPAGRTRSPLTARKPGPARKPVLVVLHQEHSTPGRVGRLLQARGHALDIRKPRFGDALPQTMRDHAGAVIFGGPMGANDPEDFVKAEIDWIGTCLKEDAAFLGICLGAQMLAKHMGARVYTHGEGRAEVGYYPLGITESGHSHAATVGFTWPGTVYQWHRDGFDCPNGAECLATGGDFPVQAIRAGSKAYGIQFHPEVTPAMMYRWSVRGYERTLMPGAQLGHTHIPGWFQHDPAIRLWLDAFLDHWLKEPAEAGSISP

Samples

Sample ID Description Type Environment
1 2513237159 Rhizobium giardinii bv. giardinii H152 Isolate Nodule
2 2515154107 Sinorhizobium meliloti 4H41 Isolate Nodule
3 2582581283 Rhizobium sp. OK665 Isolate Rhizosphere
4 2582581306 Rhizobium sp. YR295 Isolate Rhizosphere
5 2582581865 Rhizobium sp. CF258 Isolate Rhizosphere
6 2582581866 Rhizobium sp. CF097 Isolate Rhizosphere
7 2643221637 Rhizobium sp. Root1212 Isolate Unclassified
8 2643221718 Rhizobium sp. Root268 Isolate Unclassified
9 2643221733 Bosea sp. Root381 Isolate Unclassified
10 2643221734 Bosea sp. Root670 Isolate Unclassified
11 2643221736 Bosea sp. Root483D1 Isolate Unclassified
12 2818991467 Bosea vestrisii 3192 Isolate Unclassified
13 2841760612 Bosea sp. Tri-49 Isolate Nodule
14 2841911363 Bosea caraganae RCAM04685 Isolate Nodule
15 2841917233 Bosea caraganae RCAM04680 Isolate Nodule
16 2842521101 Rhizobium giardinii SEMIA 4084 Isolate Nodule
17 2844104063 Bosea sp. Tri-39 Isolate Nodule
18 2851182111 Bosea sp. Tri-44 Isolate Nodule
19 2851246043 Bosea sp. Tri-54 Isolate Nodule
20 2882456835 Microvirga sp. KLBC 81 Isolate Unclassified
21 2884298095 Microvirga thermotolerans HR1 Isolate Rhizosphere
22 2913295892 Sinorhizobium kostiensis DSM 13372 Isolate Nodule
23 2917699015 Bosea sp. F3-2 Isolate Rhizosphere
24 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
25 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
26 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
27 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
28 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
29 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
30 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
31 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
32 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
33 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
34 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
35 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
36 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
37 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
38 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
39 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
40 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
41 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
42 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
43 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
44 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
45 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
46 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
47 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
48 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
49 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
50 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
51 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
52 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
53 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
54 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
58 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
59 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
60 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
61 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
62 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
63 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
64 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
65 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
66 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
67 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
68 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
69 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
70 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
71 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
72 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
73 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
74 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
75 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
76 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
77 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
78 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
79 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
80 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
81 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
82 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
83 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
84 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
85 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
86 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
87 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
88 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
89 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
90 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
91 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
92 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
93 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
94 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
95 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
96 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
97 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
98 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
99 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
100 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
101 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
102 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
103 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
104 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
105 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
106 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
107 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
108 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
109 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
110 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
111 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
112 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
113 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
114 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
115 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
116 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
117 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
118 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
119 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
120 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
121 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
122 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
123 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
124 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
125 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
126 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
135 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
136 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
137 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
138 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
139 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
140 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
141 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
142 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
144 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
145 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
146 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
147 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
148 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
149 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
150 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
151 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
152 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
153 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
154 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
155 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
156 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
157 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
158 8057529695 Bosea vestrisii A18/4-2 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 87.63
Metatranscriptomes 0
Isolates 12.37

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 15.98
Nodule 5.67
Rhizoplane 2.06
Rhizosphere 65.98
Stem 0
Stem Tuber 0
Unclassified 10.31

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25159J45721_1007719 3300002987 Bacteria 3045
2 JGI25151J46595_10000299 3300003187 Bacteria 54463
3 JGI25404J52841_10020045 3300003659 Bacteria 1448
4 Ga0055526_1004942 3300003771 Bacteria 7835
5 Ga0055526_1006213 3300003771 Bacteria 6558
6 Ga0055524_1000444 3300003775 Bacteria 34424
7 Ga0055524_1005884 3300003775 Bacteria 5409
8 Ga0065165_1000014 3300005262 Bacteria 292366
9 Ga0070668_100039540 3300005347 Bacteria 3607
10 Ga0070710_10357096 3300005437 Bacteria 969
11 Ga0081455_10045865 3300005937 Bacteria 3799
12 Ga0081538_10070304 3300005981 Bacteria 1933
13 Ga0081540_1000374 3300005983 Bacteria 44794
14 Ga0070717_10358639 3300006028 Bacteria 1304
15 Ga0075368_10032203 3300006042 Bacteria 2035
16 Ga0075363_100009976 3300006048 Bacteria 4484
17 Ga0075364_10012803 3300006051 Bacteria 5144
18 Ga0075367_10013106 3300006178 Bacteria 4444
19 Ga0075369_10017193 3300006186 Bacteria 2928
20 Ga0075436_100007897 3300006914 Bacteria 7282
21 Ga0075435_100103085 3300007076 Bacteria 2366
22 Ga0105249_10032314 3300009553 Bacteria 4734
23 Ga0171462_1024 3300013250 Bacteria 129278
24 Ga0163163_10884509 3300014325 Bacteria 957
25 Ga0213875_10000033 3300021388 Bacteria 170944
26 Ga0209673_1018198 3300025273 Bacteria 2565
27 Ga0209130_1000024 3300025284 Bacteria 354212
28 Ga0209130_1033156 3300025284 Bacteria 1048
29 Ga0209675_1000704 3300025291 Bacteria 23062
30 Ga0209025_1000017 3300025294 Bacteria 768983
31 Ga0209025_1001682 3300025294 Bacteria 27024
32 Ga0209025_1011630 3300025294 Bacteria 5769
33 Ga0209564_1004827 3300025295 Bacteria 8027
34 Ga0209564_1005086 3300025295 Bacteria 7669
35 Ga0209256_1000032 3300025299 Bacteria 395041
36 Ga0209256_1001443 3300025299 Bacteria 24577
37 Ga0207426_1005447 3300025302 Bacteria 5806
38 Ga0209257_1032904 3300025304 Bacteria 1637
39 Ga0207671_10217221 3300025914 Bacteria 1497
40 Ga0207679_10137746 3300025945 Bacteria 1968
41 Ga0265318_10008873 3300028577 Bacteria 4455
42 Ga0307515_10000377 3300028794 Bacteria 109082
43 Ga0307515_10000434 3300028794 Bacteria 100265
44 Ga0307515_10016274 3300028794 Bacteria 13625
45 Ga0307515_10322024 3300028794 Bacteria 1211
46 Ga0265332_10107709 3300031238 Bacteria 1175
47 Ga0265339_10077281 3300031249 Bacteria 1765
48 Ga0265331_10245240 3300031250 Bacteria 804
49 Ga0307513_10001888 3300031456 Bacteria 29770
50 Ga0307408_100085032 3300031548 Bacteria 2374
51 Ga0307408_100281160 3300031548 Bacteria 1386
52 Ga0265314_10073819 3300031711 Bacteria 2274
53 Ga0265314_10137558 3300031711 Bacteria 1515
54 Ga0307416_100264060 3300032002 Bacteria 1685
55 Ga0307510_10086640 3300033180 Bacteria 3003
56 Ga0373954_0010996 3300035118 Bacteria 4004
57 Ga0373957_0031521 3300035120 Bacteria 1948
58 Ga0373943_0083467 3300035170 Bacteria 1642
59 Ga0373924_0011087 3300035410 Bacteria 3339
60 Ga0373927_0005234 3300035695 Bacteria 8978
61 Ga0373933_0001200 3300035724 Bacteria 15345
62 Ga0373947_0002085 3300035725 Bacteria 12206
63 Ga0373937_0035661 3300036401 Bacteria 4528
64 Ga0373925_0017317 3300037068 Bacteria 5222
65 Ga0395905_0033431 3300037471 Bacteria 4831
66 Ga0436364_0533612 3300037853 Bacteria 32668
67 Ga0439438_006912 3300041405 Bacteria 3946
68 Ga0439447_075049 3300041407 Bacteria 783
69 Ga0439466_0078808 3300041411 Bacteria 1041
70 Ga0439452_023422 3300042010 Bacteria 1590
71 Ga0450906_002097 3300042145 Bacteria 4363
72 Ga0439434_0004046 3300042435 Bacteria 4281
73 Ga0450918_004274 3300042531 Bacteria 2613
74 Ga0495592_0001560 3300046454 Bacteria 15998
75 Ga0495629_0002762 3300046459 Bacteria 13419
76 Ga0495651_0000479 3300046462 Bacteria 30785
77 Ga0495653_0049911 3300046463 Bacteria 3220
78 Ga0495582_0359615 3300046473 Bacteria 838
79 Ga0495639_0172503 3300046475 Bacteria 1050
80 Ga0495664_0002479 3300046477 Bacteria 9937
81 Ga0495608_0000376 3300046511 Bacteria 31189
82 Ga0495618_0017219 3300046514 Bacteria 4429
83 Ga0495628_0384311 3300046516 Bacteria 1027
84 Ga0495630_0018553 3300046517 Bacteria 5113
85 Ga0495666_0118647 3300046526 Bacteria 1240
86 Ga0495652_0017254 3300046529 Bacteria 6445
87 Ga0495640_0017772 3300046533 Bacteria 5292
88 Ga0495587_0025818 3300046536 Bacteria 3587
89 Ga0495645_0075610 3300046543 Bacteria 2424
90 Ga0495667_0000294 3300046559 Bacteria 32145
91 Ga0495634_0006552 3300046642 Bacteria 8837
92 Ga0495635_0000880 3300046663 Bacteria 19715
93 Ga0495657_0027529 3300046675 Bacteria 4010
94 Ga0495599_0011703 3300046678 Bacteria 5393
95 Ga0495623_0011988 3300046679 Bacteria 5616
96 Ga0495658_0080097 3300046683 Bacteria 1915
97 Ga0495670_0262574 3300046691 Bacteria 922
98 Ga0495600_0029695 3300046809 Bacteria 3540
99 Ga0495581_0261714 3300047315 Bacteria 1011
100 Ga0495604_0000972 3300047317 Bacteria 23909
101 Ga0495674_0017085 3300047319 Bacteria 6758
102 Ga0495676_0056397 3300047321 Bacteria 3107
103 Ga0495680_0003955 3300047322 Bacteria 14330
104 Ga0495675_0008783 3300047444 Bacteria 6273
105 Ga0495684_0002466 3300047471 Bacteria 14757
106 Ga0495593_0021110 3300047673 Bacteria 3641
107 Ga0495602_0023878 3300048088 Bacteria 5945
108 Ga0496110_0538913 3300048913 Bacteria 1061
109 Ga0496113_0145921 3300048916 Bacteria 1864
110 Ga0496114_0050816 3300048917 Bacteria 3451
111 Ga0496114_0561849 3300048917 Bacteria 1008
112 Ga0496122_0081156 3300048925 Bacteria 2258
113 Ga0496122_0093060 3300048925 Bacteria 2046
114 Ga0496123_0013954 3300048926 Bacteria 6694
115 Ga0496125_0058043 3300048928 Bacteria 3129
116 Ga0496126_0540685 3300048929 Bacteria 926
117 Ga0501031_0064350 3300049568 Bacteria 2388
118 Ga0501033_0129290 3300049570 Bacteria 1830
119 Ga0501033_0234438 3300049570 Bacteria 1303
120 Ga0501034_0086477 3300049571 Bacteria 3135
121 Ga0501034_0314542 3300049571 Bacteria 1500
122 Ga0501037_0038172 3300049573 Bacteria 3540
123 Ga0501037_0050323 3300049573 Bacteria 3049
124 Ga0501038_0050821 3300049574 Bacteria 3581
125 Ga0501038_0188000 3300049574 Bacteria 1663
126 Ga0501038_0268452 3300049574 Bacteria 1346
127 Ga0501038_0604306 3300049574 Bacteria 829
128 Ga0501039_0155560 3300049575 Bacteria 1796
129 Ga0501043_0073178 3300049579 Bacteria 2692
130 Ga0501043_0194305 3300049579 Bacteria 1577
131 Ga0501047_0037543 3300049581 Bacteria 4683
132 Ga0501047_0082333 3300049581 Bacteria 3093
133 Ga0501047_0105459 3300049581 Bacteria 2699
134 Ga0501047_0742661 3300049581 Bacteria 798
135 Ga0501067_0043860 3300049583 Bacteria 2484
136 Ga0501069_0123816 3300049585 Bacteria 1478
137 Ga0501070_0030517 3300049586 Bacteria 4517
138 Ga0501070_0205421 3300049586 Bacteria 1617
139 Ga0501073_0047959 3300049589 Bacteria 3000
140 Ga0501073_0058475 3300049589 Bacteria 2694
141 Ga0501073_0129783 3300049589 Bacteria 1747
142 Ga0501073_0179348 3300049589 Bacteria 1466
143 Ga0501074_0145762 3300049590 Bacteria 1693
144 Ga0501076_0066872 3300049592 Bacteria 2869
145 Ga0501076_0107179 3300049592 Bacteria 2256
146 Ga0501080_0145895 3300049742 Bacteria 2187
147 Ga0501080_0152719 3300049742 Bacteria 2134
148 Ga0501080_0176372 3300049742 Bacteria 1968
149 Ga0501080_0659252 3300049742 Bacteria 925
150 Ga0501083_0000787 3300049744 Bacteria 20811
151 Ga0501083_0042281 3300049744 Bacteria 3090
152 Ga0501035_0153847 3300049822 Bacteria 1994
153 Ga0501044_0064854 3300049823 Bacteria 3726
154 Ga0501044_0534089 3300049823 Bacteria 1071
155 nmdc:mga03n38_88827_c1 3300050490 Bacteria 1467
156 nmdc:mga0yw44_100576_c1 3300050492 Bacteria 1841
157 nmdc:mga0rr50_238364_c1 3300050513 Bacteria 1507
158 nmdc:mga08x19_27738_c1 3300050514 Bacteria 3543
159 Ga0495601_0008566 3300053077 Bacteria 6041
160 Ga0495612_0030860 3300053078 Bacteria 2159
161 Ga0495595_0001929 3300053084 Bacteria 8045
162 Ga0495619_0000426 3300053085 Bacteria 28605
163 Ga0500622_0082129 3300053156 Bacteria 1612
164 Ga0500624_018798 3300053157 Bacteria 1092
165 Ga0500627_0199148 3300053158 Bacteria 898
166 Ga0500636_0013442 3300053177 Bacteria 4807
167 Ga0501084_0022829 3300054114 Bacteria 5220
168 Ga0501084_0178630 3300054114 Bacteria 1792
169 Ga0501084_0311077 3300054114 Bacteria 1330
170 Ga0501082_0885033 3300060353 Bacteria 781

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300035170 Ga0373943_0083467 Ga0373943_0083467_1034_1600 188
2 3300060353 Ga0501082_0885033 Ga0501082_0885033_58_660 195
3 3300053158 Ga0500627_0199148 Ga0500627_0199148_22_666 214
4 3300009553 Ga0105249_10032314 Ga0105249_100323142 226
5 3300032002 Ga0307416_100264060 Ga0307416_1002640602 227
6 3300049581 Ga0501047_0742661 Ga0501047_0742661_16_717 228
7 3300049583 Ga0501067_0043860 Ga0501067_0043860_630_1337 230
8 3300049589 Ga0501073_0058475 Ga0501073_0058475_1858_2565 230
9 3300049592 Ga0501076_0066872 Ga0501076_0066872_998_1705 230
10 3300054114 Ga0501084_0022829 Ga0501084_0022829_1391_2098 230
11 3300049589 Ga0501073_0179348 Ga0501073_0179348_302_1027 231
12 3300005347 Ga0070668_100039540 Ga0070668_1000395404 232
13 3300005437 Ga0070710_10357096 Ga0070710_103570961 232
14 3300035118 Ga0373954_0010996 Ga0373954_0010996_108_806 232
15 3300035410 Ga0373924_0011087 Ga0373924_0011087_1874_2572 232
16 3300035695 Ga0373927_0005234 Ga0373927_0005234_6730_7428 232
17 3300035724 Ga0373933_0001200 Ga0373933_0001200_13331_14029 232
18 3300035725 Ga0373947_0002085 Ga0373947_0002085_6924_7622 232
19 3300036401 Ga0373937_0035661 Ga0373937_0035661_1581_2279 232
20 3300037068 Ga0373925_0017317 Ga0373925_0017317_1317_2015 232
21 3300046454 Ga0495592_0001560 Ga0495592_0001560_3229_3927 232
22 3300046459 Ga0495629_0002762 Ga0495629_0002762_3776_4474 232
23 3300046462 Ga0495651_0000479 Ga0495651_0000479_27787_28485 232
24 3300046463 Ga0495653_0049911 Ga0495653_0049911_2409_3107 232
25 3300046473 Ga0495582_0359615 Ga0495582_0359615_20_718 232
26 3300046475 Ga0495639_0172503 Ga0495639_0172503_242_940 232
27 3300046477 Ga0495664_0002479 Ga0495664_0002479_5936_6634 232
28 3300046511 Ga0495608_0000376 Ga0495608_0000376_17852_18550 232
29 3300046514 Ga0495618_0017219 Ga0495618_0017219_2241_2939 232
30 3300046516 Ga0495628_0384311 Ga0495628_0384311_233_931 232
31 3300046517 Ga0495630_0018553 Ga0495630_0018553_889_1587 232
32 3300046526 Ga0495666_0118647 Ga0495666_0118647_217_915 232
33 3300046529 Ga0495652_0017254 Ga0495652_0017254_455_1153 232
34 3300046533 Ga0495640_0017772 Ga0495640_0017772_3856_4554 232
35 3300046536 Ga0495587_0025818 Ga0495587_0025818_1777_2475 232
36 3300046543 Ga0495645_0075610 Ga0495645_0075610_1384_2082 232
37 3300046559 Ga0495667_0000294 Ga0495667_0000294_19026_19724 232
38 3300046642 Ga0495634_0006552 Ga0495634_0006552_3517_4215 232
39 3300046663 Ga0495635_0000880 Ga0495635_0000880_8890_9588 232
40 3300046675 Ga0495657_0027529 Ga0495657_0027529_3038_3736 232
41 3300046678 Ga0495599_0011703 Ga0495599_0011703_4416_5114 232
42 3300046679 Ga0495623_0011988 Ga0495623_0011988_1573_2271 232
43 3300046683 Ga0495658_0080097 Ga0495658_0080097_217_915 232
44 3300046809 Ga0495600_0029695 Ga0495600_0029695_2515_3213 232
45 3300047315 Ga0495581_0261714 Ga0495581_0261714_77_775 232
46 3300047317 Ga0495604_0000972 Ga0495604_0000972_17506_18204 232
47 3300047319 Ga0495674_0017085 Ga0495674_0017085_3250_3948 232
48 3300047321 Ga0495676_0056397 Ga0495676_0056397_1491_2189 232
49 3300047322 Ga0495680_0003955 Ga0495680_0003955_1250_1948 232
50 3300047444 Ga0495675_0008783 Ga0495675_0008783_2414_3112 232
51 3300047471 Ga0495684_0002466 Ga0495684_0002466_1351_2049 232
52 3300047673 Ga0495593_0021110 Ga0495593_0021110_1225_1923 232
53 3300048088 Ga0495602_0023878 Ga0495602_0023878_588_1286 232
54 3300048913 Ga0496110_0538913 Ga0496110_0538913_193_891 232
55 3300048917 Ga0496114_0561849 Ga0496114_0561849_59_757 232
56 3300053077 Ga0495601_0008566 Ga0495601_0008566_3957_4655 232
57 3300053078 Ga0495612_0030860 Ga0495612_0030860_95_793 232
58 3300053084 Ga0495595_0001929 Ga0495595_0001929_248_946 232
59 3300053085 Ga0495619_0000426 Ga0495619_0000426_26786_27484 232
60 3300048925 Ga0496122_0093060 Ga0496122_0093060_267_974 234
61 3300003659 JGI25404J52841_10020045 JGI25404J52841_100200452 236
62 3300005983 Ga0081540_1000374 Ga0081540_100037447 236
63 3300006028 Ga0070717_10358639 Ga0070717_103586392 236
64 3300014325 Ga0163163_10884509 Ga0163163_108845091 236
65 3300049574 Ga0501038_0188000 Ga0501038_0188000_213_944 236
66 3300049579 Ga0501043_0073178 Ga0501043_0073178_837_1568 236
67 3300049581 Ga0501047_0037543 Ga0501047_0037543_1856_2587 236
68 3300049586 Ga0501070_0030517 Ga0501070_0030517_2462_3193 236
69 3300049742 Ga0501080_0145895 Ga0501080_0145895_1387_2118 236
70 3300049823 Ga0501044_0064854 Ga0501044_0064854_1713_2444 236
71 3300021388 Ga0213875_10000033 Ga0213875_10000033109 237
72 3300028794 Ga0307515_10000434 Ga0307515_1000043445 237
73 3300031250 Ga0265331_10245240 Ga0265331_102452401 237
74 3300031711 Ga0265314_10073819 Ga0265314_100738191 237
75 3300037853 Ga0436364_0533612 Ga0436364_0533612_13255_14007 237
76 3300049744 Ga0501083_0042281 Ga0501083_0042281_1076_1801 237
77 3300054114 Ga0501084_0311077 Ga0501084_0311077_128_853 237
78 3300031711 Ga0265314_10137558 Ga0265314_101375582 238
79 3300049568 Ga0501031_0064350 Ga0501031_0064350_414_1139 238
80 3300049570 Ga0501033_0129290 Ga0501033_0129290_1051_1776 238
81 3300049571 Ga0501034_0086477 Ga0501034_0086477_2103_2828 238
82 3300049571 Ga0501034_0314542 Ga0501034_0314542_701_1426 238
83 3300049573 Ga0501037_0038172 Ga0501037_0038172_677_1402 238
84 3300049574 Ga0501038_0050821 Ga0501038_0050821_1789_2514 238
85 3300049579 Ga0501043_0194305 Ga0501043_0194305_371_1096 238
86 3300049581 Ga0501047_0082333 Ga0501047_0082333_1340_2065 238
87 3300049822 Ga0501035_0153847 Ga0501035_0153847_1196_1921 238
88 iso_pu_bacteria 2513237159 2513998538 238
89 iso_pu_bacteria 2582581283 2585166775 238
90 iso_pu_bacteria 2582581306 2585266877 238
91 iso_pu_bacteria 2582581865 2585387920 238
92 iso_pu_bacteria 2582581866 2585396015 238
93 iso_pu_bacteria 2842521101 2842524431 238
94 3300049570 Ga0501033_0234438 Ga0501033_0234438_253_984 239
95 3300049574 Ga0501038_0604306 Ga0501038_0604306_33_764 239
96 3300049575 Ga0501039_0155560 Ga0501039_0155560_458_1189 239
97 3300049581 Ga0501047_0105459 Ga0501047_0105459_1414_2145 239
98 3300049585 Ga0501069_0123816 Ga0501069_0123816_58_789 239
99 3300049586 Ga0501070_0205421 Ga0501070_0205421_391_1122 239
100 3300049589 Ga0501073_0047959 Ga0501073_0047959_1329_2060 239
101 3300049590 Ga0501074_0145762 Ga0501074_0145762_178_909 239
102 3300049742 Ga0501080_0176372 Ga0501080_0176372_252_983 239
103 3300049823 Ga0501044_0534089 Ga0501044_0534089_74_805 239
104 iso_pu_bacteria 2515154107 2515610973 239
105 iso_pu_bacteria 2643221637 2644209423 239
106 iso_pu_bacteria 2643221718 2644652951 239
107 iso_pu_bacteria 2913295892 2913300084 239
108 3300025914 Ga0207671_10217221 Ga0207671_102172212 240
109 3300028577 Ga0265318_10008873 Ga0265318_100088736 240
110 3300033180 Ga0307510_10086640 Ga0307510_100866402 240
111 3300041407 Ga0439447_075049 Ga0439447_075049_16_756 240
112 3300049592 Ga0501076_0107179 Ga0501076_0107179_1071_1808 240
113 3300049742 Ga0501080_0659252 Ga0501080_0659252_65_802 240
114 3300049744 Ga0501083_0000787 Ga0501083_0000787_17446_18183 240
115 3300054114 Ga0501084_0178630 Ga0501084_0178630_500_1237 240
116 3300025284 Ga0209130_1033156 Ga0209130_10331562 241
117 3300025304 Ga0209257_1032904 Ga0209257_10329042 241
118 3300028794 Ga0307515_10000377 Ga0307515_1000037717 241
119 3300028794 Ga0307515_10016274 Ga0307515_1001627415 241
120 3300031456 Ga0307513_10001888 Ga0307513_1000188811 241
121 3300031548 Ga0307408_100085032 Ga0307408_1000850322 241
122 3300031548 Ga0307408_100281160 Ga0307408_1002811602 241
123 3300041405 Ga0439438_006912 Ga0439438_006912_1440_2183 241
124 3300041411 Ga0439466_0078808 Ga0439466_0078808_148_891 241
125 3300042010 Ga0439452_023422 Ga0439452_023422_628_1371 241
126 3300042145 Ga0450906_002097 Ga0450906_002097_314_1057 241
127 3300042435 Ga0439434_0004046 Ga0439434_0004046_939_1682 241
128 3300042531 Ga0450918_004274 Ga0450918_004274_1709_2452 241
129 3300053157 Ga0500624_018798 Ga0500624_018798_193_936 241
130 iso_pu_bacteria 2882456835 2882460992 242
131 iso_pu_bacteria 2884298095 2884298542 242
132 3300006914 Ga0075436_100007897 Ga0075436_1000078973 243
133 3300007076 Ga0075435_100103085 Ga0075435_1001030852 243
134 3300050513 nmdc:mga0rr50_238364_c1 nmdc:mga0rr50_238364_c1_166_939 243
135 3300050514 nmdc:mga08x19_27738_c1 nmdc:mga08x19_27738_c1_1248_2021 243
136 3300005981 Ga0081538_10070304 Ga0081538_100703043 244
137 3300025945 Ga0207679_10137746 Ga0207679_101377462 244
138 3300037471 Ga0395905_0033431 Ga0395905_0033431_331_1071 244
139 3300005937 Ga0081455_10045865 Ga0081455_100458656 246
140 3300049589 Ga0501073_0129783 Ga0501073_0129783_629_1396 246
141 3300049742 Ga0501080_0152719 Ga0501080_0152719_685_1452 246
142 3300025294 Ga0209025_1011630 Ga0209025_10116303 247
143 3300031238 Ga0265332_10107709 Ga0265332_101077091 247
144 3300031249 Ga0265339_10077281 Ga0265339_100772811 247
145 3300035120 Ga0373957_0031521 Ga0373957_0031521_804_1586 251
146 3300050490 nmdc:mga03n38_88827_c1 nmdc:mga03n38_88827_c1_511_1332 251
147 3300050492 nmdc:mga0yw44_100576_c1 nmdc:mga0yw44_100576_c1_473_1294 251
148 iso_pu_bacteria 2643221733 2644729931 252
149 3300006042 Ga0075368_10032203 Ga0075368_100322032 254
150 3300006048 Ga0075363_100009976 Ga0075363_1000099764 254
151 3300006051 Ga0075364_10012803 Ga0075364_100128032 254
152 3300006178 Ga0075367_10013106 Ga0075367_100131066 254
153 3300006186 Ga0075369_10017193 Ga0075369_100171932 254
154 iso_pu_bacteria 2643221736 2644742942 254
155 iso_pu_bacteria 2841760612 2841765254 254
156 iso_pu_bacteria 2844104063 2844106864 254
157 iso_pu_bacteria 2851182111 2851185838 254
158 iso_pu_bacteria 2851246043 2851248904 254
159 iso_pu_bacteria 8057529695 8057532739 254
160 iso_pu_bacteria 2841911363 2841912420 256
161 iso_pu_bacteria 2841917233 2841918175 256
162 iso_pu_bacteria 2917699015 2917703208 256
163 3300025294 Ga0209025_1001682 Ga0209025_100168219 260
164 3300048928 Ga0496125_0058043 Ga0496125_0058043_2315_3118 260
165 3300048929 Ga0496126_0540685 Ga0496126_0540685_102_905 260
166 3300049573 Ga0501037_0050323 Ga0501037_0050323_504_1307 260
167 3300049574 Ga0501038_0268452 Ga0501038_0268452_335_1138 260
168 3300003187 JGI25151J46595_10000299 JGI25151J46595_1000029917 264
169 3300025294 Ga0209025_1000017 Ga0209025_1000017637 264
170 3300003771 Ga0055526_1006213 Ga0055526_10062134 265
171 3300025295 Ga0209564_1005086 Ga0209564_10050864 265
172 iso_pu_bacteria 2643221734 2644734113 272
173 iso_pu_bacteria 2818991467 2819721197 272
174 3300048925 Ga0496122_0081156 Ga0496122_0081156_737_1597 273
175 3300048926 Ga0496123_0013954 Ga0496123_0013954_5098_5958 273
176 3300048917 Ga0496114_0050816 Ga0496114_0050816_718_1572 275
177 3300002987 JGI25159J45721_1007719 JGI25159J45721_10077192 276
178 3300003771 Ga0055526_1004942 Ga0055526_10049424 276
179 3300003775 Ga0055524_1000444 Ga0055524_100044434 276
180 3300003775 Ga0055524_1005884 Ga0055524_10058842 276
181 3300005262 Ga0065165_1000014 Ga0065165_1000014240 276
182 3300013250 Ga0171462_1024 Ga0171462_102456 276
183 3300025273 Ga0209673_1018198 Ga0209673_10181981 276
184 3300025284 Ga0209130_1000024 Ga0209130_100002436 276
185 3300025291 Ga0209675_1000704 Ga0209675_100070412 276
186 3300025295 Ga0209564_1004827 Ga0209564_10048275 276
187 3300025299 Ga0209256_1000032 Ga0209256_1000032341 276
188 3300025299 Ga0209256_1001443 Ga0209256_10014433 276
189 3300025302 Ga0207426_1005447 Ga0207426_10054474 276
190 3300028794 Ga0307515_10322024 Ga0307515_103220242 276
191 3300046691 Ga0495670_0262574 Ga0495670_0262574_40_900 276
192 3300048916 Ga0496113_0145921 Ga0496113_0145921_160_1020 276
193 3300053156 Ga0500622_0082129 Ga0500622_0082129_558_1418 276
194 3300053177 Ga0500636_0013442 Ga0500636_0013442_618_1478 276

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00117

GATase

Glutamine amidotransferase class-I

58

231

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
3m3p-assembly1.cif.gz_A crystal structure of glutamine amido transferase from methylobacillus flagellatus 0.8956 38 271
3l7n-assembly1.cif.gz_A crystal structure of smu.1228c 0.877 40 267
1o1y-assembly1.cif.gz_A crystal structure of a glutamine amidotransferase (tm1158) from thermotoga maritima at 1.70 a resolution 0.8636 38 268
3l7n-assembly1.cif.gz_A crystal structure of smu.1228c 0.8525 40 267
1o1y-assembly1.cif.gz_A crystal structure of a glutamine amidotransferase (tm1158) from thermotoga maritima at 1.70 a resolution 0.8494 38 268
ID Description Score Start End Superfamily
3l83A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.909 39 266 3.40.50.880
3l7nA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.877 40 267 3.40.50.880
3l83A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.8726 39 266 3.40.50.880
1o1yA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.8618 38 268 3.40.50.880
3l7nA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.8525 40 267 3.40.50.880
ID Description Score Start End GO Terms
AF-A0A537U4I4-F1-model_v4 Glutamine amidotransferase 0.9918 38 150 GO:0005829
GO:0016740
AF-A0A381TXX1-F1-model_v4 Glutamine amidotransferase domain-containing protein 0.9847 37 134
AF-U2LMX1-F1-model_v4 deleted 0.9829 59 273
AF-A0A5R8YE33-F1-model_v4 Glutamine amidotransferase 0.9824 37 266 GO:0005829
GO:0006541
GO:0016740
AF-A0A561GM39-F1-model_v4 deleted 0.9816 32 266

Feature Viewer

pLDDT pTM Quality
86.4 0.83 High
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Predicted Structure (AlphaFold2)

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