F297733

General Info

Members Datasets Scaffolds Average Seq Length
193 138 193 231

Family's Representative Sequence

Representative Sequence 3300049568|Ga0501031_0041805|Ga0501031_0041805_1785_2579
Length 264
Sequence MDLALAERAARMTSAAPASLPLAGVADSFTGAVDFIFNERPSAGGFSEGGNQVGGLEEIADLLWTHVEVSALALGVALVIALPIGLFLGHRGTGELLAVAIGNAGRAIPELALIAFMAAFIGVGLLNVTIALAVLGIPPILTNSFVAMRQVDRGVVEAARGMGMTEAEVVRRVELPLAVPTVMGGVRTAAINIVATATIAPLAGVLTLGDLILQRNVVGEEGVIAGAIVVALLALTVELCLAGVQRLLTPRGLRLQRDSARATA

Samples

Sample ID Description Type Environment
1 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
2 3300002244 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1 Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
5 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
6 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
7 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
8 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
9 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
10 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
11 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
12 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
13 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
14 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
15 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
16 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
17 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
18 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
19 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
20 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
21 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
22 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
23 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
24 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
25 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
26 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
27 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
28 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
29 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
30 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
31 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
32 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
33 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
34 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
35 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
52 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
53 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
54 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
55 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
56 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
57 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
58 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
59 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
60 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
61 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
62 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
63 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
64 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
65 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
66 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
67 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
68 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
69 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
70 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
71 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
72 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
73 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
74 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
75 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
76 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
77 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
78 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
79 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
80 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
81 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
82 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
83 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
84 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
85 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
86 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
87 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
88 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
89 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
90 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
91 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
92 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
93 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
94 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
95 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
96 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
97 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
98 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
99 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
100 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
101 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
102 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
103 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
104 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
105 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
106 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
107 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
108 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
114 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
115 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
116 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
117 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
118 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
119 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
120 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
121 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
122 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
123 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
124 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
125 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
126 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
127 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
128 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
129 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
130 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
131 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
132 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
133 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
134 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
135 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
136 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
137 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
138 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.15
Nodule 0
Rhizoplane 16.06
Rhizosphere 75.65
Stem 0
Stem Tuber 0
Unclassified 4.15

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24034J26672_10001486 3300002239 Bacteria 3118
2 JGI24742J22300_10001100 3300002244 Bacteria 4187
3 Ga0070683_100006401 3300005329 Bacteria 9872
4 Ga0070683_100264537 3300005329 Bacteria 1636
5 Ga0070691_10000105 3300005341 Bacteria 24902
6 Ga0070691_10004043 3300005341 Bacteria 6647
7 Ga0070674_100000006 3300005356 Bacteria 150063
8 Ga0070667_100804933 3300005367 Bacteria 872
9 Ga0070679_100003822 3300005530 Bacteria 13829
10 Ga0070684_100124323 3300005535 Bacteria 2323
11 Ga0070664_100131083 3300005564 Bacteria 2202
12 Ga0068854_100036643 3300005578 Bacteria 3440
13 Ga0068856_100148506 3300005614 Bacteria 2352
14 Ga0068866_10001492 3300005718 Bacteria 9964
15 Ga0068861_100107121 3300005719 Unclassified 2234
16 Ga0068858_100000033 3300005842 Bacteria 142748
17 Ga0081455_10011294 3300005937 Bacteria 8984
18 Ga0081455_10031930 3300005937 Bacteria 4754
19 Ga0081538_10000030 3300005981 Bacteria 124321
20 Ga0081538_10000058 3300005981 Bacteria 102121
21 Ga0081538_10014612 3300005981 Bacteria 6137
22 Ga0075365_10027713 3300006038 Bacteria 3607
23 Ga0075365_10218937 3300006038 Bacteria 1335
24 Ga0075363_100086088 3300006048 Bacteria 1725
25 Ga0075428_100073693 3300006844 Bacteria 3729
26 Ga0075430_100012685 3300006846 Bacteria 7179
27 Ga0075431_100011441 3300006847 Bacteria 8942
28 Ga0075433_10125810 3300006852 Bacteria 2276
29 Ga0075434_100362262 3300006871 Bacteria 1471
30 Ga0105245_10005382 3300009098 Bacteria 11251
31 Ga0105247_10000202 3300009101 Bacteria 58345
32 Ga0105243_10085897 3300009148 Bacteria 2580
33 Ga0105242_10068269 3300009176 Bacteria 2941
34 Ga0105242_10135295 3300009176 Bacteria 2132
35 Ga0105249_10000074 3300009553 Bacteria 145235
36 Ga0157370_10003308 3300013104 Bacteria 19003
37 Ga0157370_10285787 3300013104 Bacteria 1524
38 Ga0157374_10021164 3300013296 Bacteria 5782
39 Ga0157378_10023498 3300013297 Bacteria 5424
40 Ga0157375_10000363 3300013308 Bacteria 41402
41 Ga0157375_10006935 3300013308 Bacteria 9891
42 Ga0157380_10000219 3300014326 Bacteria 34156
43 Ga0157379_10028534 3300014968 Bacteria 4963
44 Ga0207642_10000379 3300025899 Bacteria 13344
45 Ga0207642_10001950 3300025899 Bacteria 6360
46 Ga0207710_10000369 3300025900 Bacteria 31539
47 Ga0207707_10009620 3300025912 Bacteria 8384
48 Ga0207652_10000549 3300025921 Bacteria 38051
49 Ga0207652_10237436 3300025921 Bacteria 1643
50 Ga0207694_10000004 3300025924 Bacteria 967075
51 Ga0207687_10000055 3300025927 Bacteria 88382
52 Ga0207686_10011244 3300025934 Bacteria 4895
53 Ga0207686_10097140 3300025934 Bacteria 1959
54 Ga0207709_10050868 3300025935 Bacteria 2536
55 Ga0207669_10000010 3300025937 Bacteria 150070
56 Ga0207669_10321819 3300025937 Bacteria 1184
57 Ga0207661_10002911 3300025944 Bacteria 11827
58 Ga0207661_10168526 3300025944 Bacteria 1905
59 Ga0207679_10076044 3300025945 Bacteria 2550
60 Ga0207712_10000007 3300025961 Bacteria 539589
61 Ga0207703_10001103 3300026035 Bacteria 25585
62 Ga0207702_10006846 3300026078 Bacteria 9777
63 Ga0207702_10159325 3300026078 Bacteria 2060
64 Ga0207675_100142881 3300026118 Unclassified 2274
65 Ga0207683_10862229 3300026121 Bacteria 841
66 Ga0265338_10000230 3300028800 Bacteria 103891
67 Ga0265325_10040648 3300031241 Bacteria 2441
68 Ga0265331_10032983 3300031250 Bacteria 2563
69 Ga0316578_10310618 3300031728 Bacteria 942
70 Ga0307415_100000648 3300032126 Bacteria 15309
71 Ga0316574_0005793 3300035398 Bacteria 6626
72 Ga0373937_0015537 3300036401 Bacteria 6736
73 Ga0451807_1172076 3300041486 Unclassified 2580
74 Ga0451833_0365202 3300041491 Bacteria 1584
75 Ga0451839_1642805 3300041496 Bacteria 1854
76 Ga0451853_3896644 3300041512 Bacteria 2194
77 Ga0466963_0000200 3300044694 Bacteria 25265
78 Ga0495629_0045644 3300046459 Bacteria 3074
79 Ga0495641_0201565 3300046461 Bacteria 892
80 Ga0495608_0006968 3300046511 Bacteria 8001
81 Ga0495628_0120534 3300046516 Bacteria 2013
82 Ga0495630_0000405 3300046517 Bacteria 33616
83 Ga0495640_0304084 3300046533 Bacteria 990
84 Ga0495587_0001970 3300046536 Bacteria 13697
85 Ga0495645_0029744 3300046543 Bacteria 3975
86 Ga0495667_0000075 3300046559 Bacteria 73540
87 Ga0495667_0062228 3300046559 Bacteria 2446
88 Ga0495656_0000132 3300046615 Bacteria 27907
89 Ga0495634_0000212 3300046642 Bacteria 53864
90 Ga0495635_0016987 3300046663 Bacteria 5081
91 Ga0495657_0045439 3300046675 Bacteria 2980
92 Ga0495658_0149126 3300046683 Bacteria 1435
93 Ga0495669_0003378 3300046684 Bacteria 6569
94 Ga0495669_0004513 3300046684 Bacteria 5755
95 Ga0495613_0069662 3300046689 Bacteria 2564
96 Ga0495624_0000009 3300046690 Bacteria 145026
97 Ga0495624_0137169 3300046690 Bacteria 1499
98 Ga0495649_0001198 3300046694 Bacteria 20005
99 Ga0495600_0028407 3300046809 Bacteria 3619
100 Ga0495600_0098084 3300046809 Bacteria 1910
101 Ga0495600_0107632 3300046809 Bacteria 1816
102 Ga0495674_0543101 3300047319 Bacteria 926
103 Ga0495676_0005236 3300047321 Bacteria 11864
104 Ga0495680_0000196 3300047322 Bacteria 65437
105 Ga0495680_0045467 3300047322 Bacteria 3466
106 Ga0495680_0075536 3300047322 Bacteria 2557
107 Ga0495680_0096367 3300047322 Bacteria 2210
108 Ga0495679_013875 3300047446 Bacteria 3006
109 Ga0495684_0009398 3300047471 Bacteria 7548
110 Ga0495593_0051480 3300047673 Bacteria 2179
111 Ga0496100_0000002 3300048903 Bacteria 489057
112 Ga0496100_0000038 3300048903 Bacteria 94110
113 Ga0496101_0000001 3300048904 Bacteria 489057
114 Ga0496101_0000010 3300048904 Bacteria 281990
115 Ga0496102_0000584 3300048905 Bacteria 38605
116 Ga0496103_0000043 3300048906 Bacteria 167983
117 Ga0496104_0000576 3300048907 Bacteria 31360
118 Ga0496105_0000006 3300048908 Bacteria 393578
119 Ga0496105_0000488 3300048908 Bacteria 26096
120 Ga0496106_0000018 3300048909 Bacteria 175028
121 Ga0496106_0000022 3300048909 Bacteria 166339
122 Ga0496106_0000864 3300048909 Bacteria 22031
123 Ga0496107_0000016 3300048910 Bacteria 172319
124 Ga0496107_0000032 3300048910 Bacteria 99848
125 Ga0496108_0002417 3300048911 Bacteria 14918
126 Ga0496108_0389370 3300048911 Bacteria 1217
127 Ga0496109_0000279 3300048912 Bacteria 48999
128 Ga0496110_0011873 3300048913 Bacteria 7155
129 Ga0496110_0146748 3300048913 Bacteria 2134
130 Ga0496111_0014518 3300048914 Bacteria 5384
131 Ga0496111_0070174 3300048914 Bacteria 2548
132 Ga0496111_0078340 3300048914 Bacteria 2410
133 Ga0496112_0336397 3300048915 Bacteria 1453
134 Ga0496112_0468053 3300048915 Bacteria 1198
135 Ga0496113_0271622 3300048916 Bacteria 1355
136 Ga0496114_0000014 3300048917 Bacteria 297902
137 Ga0496114_0007982 3300048917 Bacteria 8374
138 Ga0496114_0291392 3300048917 Unclassified 1440
139 Ga0496115_0000020 3300048918 Bacteria 171995
140 Ga0496115_0002818 3300048918 Bacteria 12497
141 Ga0496116_0001659 3300048919 Bacteria 24487
142 Ga0496118_0098800 3300048921 Bacteria 1981
143 Ga0496118_0333923 3300048921 Bacteria 816
144 Ga0496119_0003832 3300048922 Bacteria 15365
145 Ga0496124_0010869 3300048927 Bacteria 9162
146 Ga0501031_0041805 3300049568 Bacteria 2993
147 Ga0501034_0029835 3300049571 Bacteria 5543
148 Ga0501034_0053790 3300049571 Bacteria 4053
149 Ga0501034_0194667 3300049571 Bacteria 1988
150 Ga0501039_0111468 3300049575 Bacteria 2139
151 Ga0501040_0278202 3300049576 Bacteria 1195
152 Ga0501042_0071674 3300049578 Bacteria 2479
153 Ga0501042_0174663 3300049578 Bacteria 1550
154 Ga0501042_0257758 3300049578 Bacteria 1259
155 Ga0501048_0015238 3300049582 Bacteria 5679
156 Ga0501048_0063486 3300049582 Bacteria 2612
157 Ga0501068_0088873 3300049584 Bacteria 1904
158 Ga0501069_0512190 3300049585 Bacteria 716
159 Ga0501070_0030642 3300049586 Bacteria 4507
160 Ga0501071_0006530 3300049587 Bacteria 7573
161 Ga0501072_0006551 3300049588 Bacteria 8869
162 Ga0501072_0030038 3300049588 Bacteria 4248
163 Ga0501074_0064021 3300049590 Bacteria 2648
164 Ga0501075_0034909 3300049591 Bacteria 3748
165 Ga0501075_0136503 3300049591 Bacteria 1869
166 Ga0501075_0377901 3300049591 Unclassified 1080
167 Ga0501076_0023899 3300049592 Bacteria 4716
168 Ga0501077_0054214 3300049593 Bacteria 2546
169 Ga0501079_0003967 3300049741 Bacteria 10933
170 Ga0501079_0047986 3300049741 Bacteria 3295
171 Ga0501081_0164464 3300049743 Bacteria 1600
172 Ga0501081_0419124 3300049743 Bacteria 992
173 Ga0501044_0192378 3300049823 Bacteria 2002
174 nmdc:mga03n38_91672_c1 3300050490 Bacteria 1448
175 nmdc:mga00v17_328349_c1 3300050491 Bacteria 994
176 nmdc:mga00v17_387960_c1 3300050491 Bacteria 908
177 nmdc:mga0yw44_5488_c1 3300050492 Bacteria 6000
178 nmdc:mga06r32_244637_c1 3300050510 Bacteria 1781
179 nmdc:mga0n895_174827_c1 3300050512 Bacteria 2178
180 nmdc:mga0a205_760_c2 3300050515 Bacteria 2549
181 Ga0495601_0011384 3300053077 Bacteria 5319
182 Ga0495601_0044785 3300053077 Bacteria 2781
183 Ga0495601_0116832 3300053077 Bacteria 1730
184 Ga0495612_0000228 3300053078 Bacteria 23756
185 Ga0495619_0000001 3300053085 Bacteria 586054
186 Ga0495619_0000022 3300053085 Bacteria 184144
187 Ga0495619_0003460 3300053085 Bacteria 10187
188 Ga0500566_0022124 3300053094 Bacteria 3736
189 Ga0501084_0016640 3300054114 Bacteria 6107
190 Ga0501082_0036837 3300060353 Bacteria 4214
191 Ga0501082_0148929 3300060353 Bacteria 2032
192 Ga0530510_0006377 3300061734 Bacteria 8212
193 Ga0530510_0173669 3300061734 Bacteria 1596

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049585 Ga0501069_0512190 Ga0501069_0512190_12_662 201
2 3300048907 Ga0496104_0000576 Ga0496104_0000576_25771_26487 204
3 3300048908 Ga0496105_0000488 Ga0496105_0000488_22236_22952 204
4 3300049578 Ga0501042_0257758 Ga0501042_0257758_309_1016 204
5 3300049591 Ga0501075_0136503 Ga0501075_0136503_1095_1802 204
6 3300053077 Ga0495601_0011384 Ga0495601_0011384_4203_4919 205
7 3300041491 Ga0451833_0365202 Ga0451833_0365202_325_1038 208
8 3300005937 Ga0081455_10011294 Ga0081455_100112944 209
9 3300006847 Ga0075431_100011441 Ga0075431_1000114419 209
10 3300006844 Ga0075428_100073693 Ga0075428_1000736934 210
11 3300053077 Ga0495601_0044785 Ga0495601_0044785_709_1404 210
12 3300006846 Ga0075430_100012685 Ga0075430_1000126855 211
13 3300006871 Ga0075434_100362262 Ga0075434_1003622622 212
14 3300046642 Ga0495634_0000212 Ga0495634_0000212_49132_49854 212
15 3300050512 nmdc:mga0n895_174827_c1 nmdc:mga0n895_174827_c1_743_1483 212
16 3300053078 Ga0495612_0000228 Ga0495612_0000228_560_1261 212
17 3300046536 Ga0495587_0001970 Ga0495587_0001970_12961_13674 213
18 3300047319 Ga0495674_0543101 Ga0495674_0543101_97_816 213
19 3300005329 Ga0070683_100264537 Ga0070683_1002645372 214
20 3300005564 Ga0070664_100131083 Ga0070664_1001310833 214
21 3300025944 Ga0207661_10168526 Ga0207661_101685262 214
22 3300025945 Ga0207679_10076044 Ga0207679_100760443 214
23 3300046683 Ga0495658_0149126 Ga0495658_0149126_496_1197 214
24 3300046809 Ga0495600_0028407 Ga0495600_0028407_2051_2752 214
25 3300047673 Ga0495593_0051480 Ga0495593_0051480_964_1665 214
26 3300053085 Ga0495619_0000022 Ga0495619_0000022_117019_117729 214
27 3300005719 Ga0068861_100107121 Ga0068861_1001071213 215
28 3300014326 Ga0157380_10000219 Ga0157380_1000021912 215
29 3300026118 Ga0207675_100142881 Ga0207675_1001428812 215
30 3300046461 Ga0495641_0201565 Ga0495641_0201565_106_828 215
31 3300049578 Ga0501042_0071674 Ga0501042_0071674_1059_1772 215
32 3300005614 Ga0068856_100148506 Ga0068856_1001485063 216
33 3300013104 Ga0157370_10003308 Ga0157370_1000330822 216
34 3300026078 Ga0207702_10159325 Ga0207702_101593252 216
35 3300046559 Ga0495667_0062228 Ga0495667_0062228_189_929 216
36 3300032126 Ga0307415_100000648 Ga0307415_1000006487 217
37 3300046663 Ga0495635_0016987 Ga0495635_0016987_714_1457 217
38 3300047322 Ga0495680_0075536 Ga0495680_0075536_1793_2515 217
39 3300005356 Ga0070674_100000006 Ga0070674_10000000623 218
40 3300005718 Ga0068866_10001492 Ga0068866_100014923 218
41 3300009148 Ga0105243_10085897 Ga0105243_100858973 218
42 3300009176 Ga0105242_10068269 Ga0105242_100682693 218
43 3300025899 Ga0207642_10000379 Ga0207642_100003793 218
44 3300025934 Ga0207686_10011244 Ga0207686_100112445 218
45 3300025935 Ga0207709_10050868 Ga0207709_100508683 218
46 3300025937 Ga0207669_10000010 Ga0207669_10000010135 218
47 3300048909 Ga0496106_0000864 Ga0496106_0000864_17730_18449 218
48 3300048914 Ga0496111_0014518 Ga0496111_0014518_2937_3638 218
49 3300048915 Ga0496112_0336397 Ga0496112_0336397_216_917 218
50 3300009101 Ga0105247_10000202 Ga0105247_1000020220 219
51 3300013296 Ga0157374_10021164 Ga0157374_100211643 219
52 3300013297 Ga0157378_10023498 Ga0157378_100234986 219
53 3300025900 Ga0207710_10000369 Ga0207710_1000036933 219
54 3300005341 Ga0070691_10000105 Ga0070691_1000010522 220
55 3300005341 Ga0070691_10004043 Ga0070691_100040435 220
56 3300009176 Ga0105242_10135295 Ga0105242_101352952 220
57 3300025899 Ga0207642_10001950 Ga0207642_100019503 220
58 3300025934 Ga0207686_10097140 Ga0207686_100971402 220
59 3300048911 Ga0496108_0002417 Ga0496108_0002417_21_743 220
60 3300048912 Ga0496109_0000279 Ga0496109_0000279_14184_14906 220
61 3300048917 Ga0496114_0007982 Ga0496114_0007982_6572_7294 220
62 3300048917 Ga0496114_0291392 Ga0496114_0291392_733_1428 220
63 3300049586 Ga0501070_0030642 Ga0501070_0030642_1047_1760 220
64 3300049591 Ga0501075_0377901 Ga0501075_0377901_210_932 220
65 3300041512 Ga0451853_3896644 Ga0451853_3896644_665_1378 221
66 3300046516 Ga0495628_0120534 Ga0495628_0120534_1073_1774 221
67 3300046689 Ga0495613_0069662 Ga0495613_0069662_1083_1805 221
68 3300044694 Ga0466963_0000200 Ga0466963_0000200_2983_3699 222
69 3300047446 Ga0495679_013875 Ga0495679_013875_1088_1825 222
70 3300049578 Ga0501042_0174663 Ga0501042_0174663_460_1182 222
71 3300046517 Ga0495630_0000405 Ga0495630_0000405_24932_25654 223
72 3300046675 Ga0495657_0045439 Ga0495657_0045439_1409_2131 223
73 3300046809 Ga0495600_0107632 Ga0495600_0107632_420_1142 223
74 3300053077 Ga0495601_0116832 Ga0495601_0116832_319_1041 223
75 3300005367 Ga0070667_100804933 Ga0070667_1008049332 224
76 3300028800 Ga0265338_10000230 Ga0265338_1000023061 224
77 3300031241 Ga0265325_10040648 Ga0265325_100406482 224
78 3300031250 Ga0265331_10032983 Ga0265331_100329833 224
79 3300048919 Ga0496116_0001659 Ga0496116_0001659_9925_10650 224
80 3300048921 Ga0496118_0098800 Ga0496118_0098800_1066_1791 224
81 3300048922 Ga0496119_0003832 Ga0496119_0003832_11083_11808 224
82 3300006038 Ga0075365_10027713 Ga0075365_100277133 225
83 3300006048 Ga0075363_100086088 Ga0075363_1000860883 225
84 3300036401 Ga0373937_0015537 Ga0373937_0015537_5637_6368 225
85 3300047322 Ga0495680_0096367 Ga0495680_0096367_821_1552 225
86 3300048913 Ga0496110_0011873 Ga0496110_0011873_1040_1744 225
87 3300048913 Ga0496110_0146748 Ga0496110_0146748_605_1327 225
88 3300048914 Ga0496111_0078340 Ga0496111_0078340_898_1602 225
89 3300048916 Ga0496113_0271622 Ga0496113_0271622_615_1337 225
90 3300049575 Ga0501039_0111468 Ga0501039_0111468_375_1097 225
91 3300049582 Ga0501048_0063486 Ga0501048_0063486_756_1478 225
92 3300049588 Ga0501072_0030038 Ga0501072_0030038_1969_2691 225
93 3300049741 Ga0501079_0047986 Ga0501079_0047986_2202_2924 225
94 3300049743 Ga0501081_0419124 Ga0501081_0419124_31_753 225
95 3300050490 nmdc:mga03n38_91672_c1 nmdc:mga03n38_91672_c1_79_786 225
96 3300053085 Ga0495619_0000001 Ga0495619_0000001_164300_165022 225
97 3300060353 Ga0501082_0036837 Ga0501082_0036837_2674_3396 225
98 3300061734 Ga0530510_0173669 Ga0530510_0173669_745_1467 225
99 3300005981 Ga0081538_10000058 Ga0081538_1000005812 226
100 3300006038 Ga0075365_10218937 Ga0075365_102189372 226
101 3300031728 Ga0316578_10310618 Ga0316578_103106181 226
102 3300035398 Ga0316574_0005793 Ga0316574_0005793_371_1087 226
103 3300046511 Ga0495608_0006968 Ga0495608_0006968_6796_7518 226
104 3300046533 Ga0495640_0304084 Ga0495640_0304084_233_955 226
105 3300046690 Ga0495624_0137169 Ga0495624_0137169_220_942 226
106 3300047471 Ga0495684_0009398 Ga0495684_0009398_206_928 226
107 3300048914 Ga0496111_0070174 Ga0496111_0070174_313_1041 226
108 3300048917 Ga0496114_0000014 Ga0496114_0000014_27621_28340 226
109 3300048918 Ga0496115_0002818 Ga0496115_0002818_4314_5033 226
110 3300049571 Ga0501034_0194667 Ga0501034_0194667_411_1124 226
111 3300049584 Ga0501068_0088873 Ga0501068_0088873_255_989 226
112 3300050491 nmdc:mga00v17_328349_c1 nmdc:mga00v17_328349_c1_73_783 226
113 3300050492 nmdc:mga0yw44_5488_c1 nmdc:mga0yw44_5488_c1_2061_2771 226
114 3300050510 nmdc:mga06r32_244637_c1 nmdc:mga06r32_244637_c1_1010_1738 226
115 3300053085 Ga0495619_0003460 Ga0495619_0003460_4310_5032 226
116 3300006852 Ga0075433_10125810 Ga0075433_101258102 227
117 3300026121 Ga0207683_10862229 Ga0207683_108622292 227
118 3300050515 nmdc:mga0a205_760_c2 nmdc:mga0a205_760_c2_1517_2239 227
119 3300013308 Ga0157375_10006935 Ga0157375_100069352 228
120 3300049571 Ga0501034_0029835 Ga0501034_0029835_4499_5218 228
121 3300049823 Ga0501044_0192378 Ga0501044_0192378_56_775 228
122 3300025921 Ga0207652_10237436 Ga0207652_102374362 229
123 3300025924 Ga0207694_10000004 Ga0207694_10000004736 229
124 3300046559 Ga0495667_0000075 Ga0495667_0000075_61053_61796 229
125 3300046684 Ga0495669_0003378 Ga0495669_0003378_1371_2093 229
126 3300047322 Ga0495680_0045467 Ga0495680_0045467_1036_1779 229
127 3300048911 Ga0496108_0389370 Ga0496108_0389370_361_1077 229
128 3300048918 Ga0496115_0000020 Ga0496115_0000020_63038_63760 229
129 3300049571 Ga0501034_0053790 Ga0501034_0053790_806_1534 229
130 3300050491 nmdc:mga00v17_387960_c1 nmdc:mga00v17_387960_c1_127_849 229
131 3300005329 Ga0070683_100006401 Ga0070683_1000064016 230
132 3300005535 Ga0070684_100124323 Ga0070684_1001243232 230
133 3300005578 Ga0068854_100036643 Ga0068854_1000366433 230
134 3300005842 Ga0068858_100000033 Ga0068858_10000003320 230
135 3300005937 Ga0081455_10031930 Ga0081455_100319302 230
136 3300005981 Ga0081538_10000030 Ga0081538_1000003025 230
137 3300005981 Ga0081538_10014612 Ga0081538_100146122 230
138 3300014968 Ga0157379_10028534 Ga0157379_100285343 230
139 3300025944 Ga0207661_10002911 Ga0207661_100029116 230
140 3300026035 Ga0207703_10001103 Ga0207703_100011037 230
141 3300026078 Ga0207702_10006846 Ga0207702_100068468 230
142 3300041486 Ga0451807_1172076 Ga0451807_1172076_898_1617 230
143 3300041496 Ga0451839_1642805 Ga0451839_1642805_205_924 230
144 3300046615 Ga0495656_0000132 Ga0495656_0000132_489_1211 230
145 3300046809 Ga0495600_0098084 Ga0495600_0098084_1084_1803 230
146 3300047322 Ga0495680_0000196 Ga0495680_0000196_35318_36037 230
147 3300048905 Ga0496102_0000584 Ga0496102_0000584_1037_1756 230
148 3300048906 Ga0496103_0000043 Ga0496103_0000043_110220_110939 230
149 3300048921 Ga0496118_0333923 Ga0496118_0333923_61_780 230
150 3300049576 Ga0501040_0278202 Ga0501040_0278202_296_1057 230
151 3300049743 Ga0501081_0164464 Ga0501081_0164464_392_1153 230
152 3300060353 Ga0501082_0148929 Ga0501082_0148929_715_1476 230
153 3300002239 JGI24034J26672_10001486 JGI24034J26672_100014863 231
154 3300002244 JGI24742J22300_10001100 JGI24742J22300_100011003 231
155 3300005530 Ga0070679_100003822 Ga0070679_1000038228 231
156 3300009098 Ga0105245_10005382 Ga0105245_100053825 231
157 3300009553 Ga0105249_10000074 Ga0105249_1000007477 231
158 3300013104 Ga0157370_10285787 Ga0157370_102857872 231
159 3300013308 Ga0157375_10000363 Ga0157375_1000036320 231
160 3300025912 Ga0207707_10009620 Ga0207707_100096208 231
161 3300025921 Ga0207652_10000549 Ga0207652_1000054934 231
162 3300025927 Ga0207687_10000055 Ga0207687_1000005555 231
163 3300025937 Ga0207669_10321819 Ga0207669_103218191 231
164 3300025961 Ga0207712_10000007 Ga0207712_1000000779 231
165 3300046459 Ga0495629_0045644 Ga0495629_0045644_940_1662 231
166 3300046543 Ga0495645_0029744 Ga0495645_0029744_2281_3003 231
167 3300046684 Ga0495669_0004513 Ga0495669_0004513_2171_2893 231
168 3300046690 Ga0495624_0000009 Ga0495624_0000009_1049_1771 231
169 3300046694 Ga0495649_0001198 Ga0495649_0001198_1487_2209 231
170 3300047321 Ga0495676_0005236 Ga0495676_0005236_10139_10861 231
171 3300048903 Ga0496100_0000002 Ga0496100_0000002_24315_25037 231
172 3300048903 Ga0496100_0000038 Ga0496100_0000038_92312_93034 231
173 3300048904 Ga0496101_0000001 Ga0496101_0000001_24315_25037 231
174 3300048904 Ga0496101_0000010 Ga0496101_0000010_23228_23950 231
175 3300048908 Ga0496105_0000006 Ga0496105_0000006_85625_86368 231
176 3300048909 Ga0496106_0000018 Ga0496106_0000018_49329_50051 231
177 3300048909 Ga0496106_0000022 Ga0496106_0000022_18595_19317 231
178 3300048910 Ga0496107_0000016 Ga0496107_0000016_147283_148005 231
179 3300048910 Ga0496107_0000032 Ga0496107_0000032_75947_76669 231
180 3300048915 Ga0496112_0468053 Ga0496112_0468053_164_886 231
181 3300048927 Ga0496124_0010869 Ga0496124_0010869_3382_4104 231
182 3300049568 Ga0501031_0041805 Ga0501031_0041805_1785_2579 231
183 3300049582 Ga0501048_0015238 Ga0501048_0015238_3583_4377 231
184 3300049587 Ga0501071_0006530 Ga0501071_0006530_4118_4912 231
185 3300049588 Ga0501072_0006551 Ga0501072_0006551_2966_3760 231
186 3300049590 Ga0501074_0064021 Ga0501074_0064021_282_1076 231
187 3300049591 Ga0501075_0034909 Ga0501075_0034909_1787_2581 231
188 3300049592 Ga0501076_0023899 Ga0501076_0023899_2150_2944 231
189 3300049593 Ga0501077_0054214 Ga0501077_0054214_871_1665 231
190 3300049741 Ga0501079_0003967 Ga0501079_0003967_1907_2701 231
191 3300053094 Ga0500566_0022124 Ga0500566_0022124_1054_1776 231
192 3300054114 Ga0501084_0016640 Ga0501084_0016640_3684_4478 231
193 3300061734 Ga0530510_0006377 Ga0530510_0006377_3356_4150 231

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00528

BPD_transp_1

Binding-protein-dependent transport system inner membrane component

81

253

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
7ahh-assembly1.cif.gz_B opua inhibited inward-facing, sbd docked 0.8055 39 218
7ahd-assembly1.cif.gz_A opua (e190q) occluded 0.8029 38 218
3tuz-assembly2.cif.gz_F inward facing conformations of the metni methionine abc transporter: cy5 semet soak crystal form 0.7862 39 223
3tui-assembly2.cif.gz_E inward facing conformations of the metni methionine abc transporter: cy5 native crystal form 0.7806 39 223
3dhw-assembly1.cif.gz_B crystal structure of methionine importer metni 0.7679 41 213
ID Description Score Start End Superfamily
af_P45767_178_390_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8585 98 223 1.10.3720.10
af_Q2FVG9_10_202_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8447 40 219 1.10.3720.10
af_Q2FVH1_15_213_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.833 39 223 1.10.3720.10
af_Q2G088_14_207_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8323 41 218 1.10.3720.10
af_P75851_53_247_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8322 37 218 1.10.3720.10
ID Description Score Start End GO Terms
AF-A0A3M2BNQ0-F1-model_v4 ABC transporter permease subunit 0.8948 38 225 GO:0005886
GO:0031460
GO:0055085
AF-A0A7Y5TSQ4-F1-model_v4 ABC transporter permease subunit 0.8846 38 225 GO:0022857
GO:0031460
GO:0043190
AF-A0A7Y2IST3-F1-model_v4 ABC transporter permease 0.8813 39 198 GO:0005886
GO:0031460
GO:0055085
AF-A0A2V7HKY8-F1-model_v4 ABC transmembrane type-1 domain-containing protein 0.881 38 225 GO:0022857
GO:0031460
GO:0043190
AF-A0A1I0DBP4-F1-model_v4 Osmoprotectant transport system permease protein 0.8793 39 227 GO:0005886
GO:0031460
GO:0055085

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pLDDT pTM Quality
80.95 0.76 High
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Predicted Structure (AlphaFold2)

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