F297246
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 193 | 160 | 386 | 442 |
Family's Representative Sequence
| Representative Sequence | 3300025913|Ga0207695_10041516|Ga0207695_100415164 |
| Length | 477 |
| Sequence | VTASESTSAESVDTIHPADRADAAGRAQATPLSGFPELLPAERLAELQVLDQLRRTFELHGFAPIETRATEPLEQLLRKGEVDKEVYLLRRLHAAEGEAADSSAPDSSVLGLHFDLTVPFARYVLENAGKLEWRGERPQEGRYREFTQADIDVVARDVLPFHHDVEVARVMAEALSALPVPALTLQVNNRKLIEGYFRGVGAPDPAAVMRVIDKMDKVPAEIVLAMLVDDAGLTAEQAARCLALAQIRTPNSSFVEQVTALGVSDPLLSEGLTELAAVVDGCSGLNTDRFSVVADLRIARGLDYYTGTVFETRLAGFESLGSICSGGRYDSLASDGRTSYPGVGISLGVTRMLVPLFARKKLTASRSVPSAVLVALPDEESRPGSELIAQRLRARGVPCEVAPSPQKYGKQIRFAERRGIPFVWFPAGVGPNGVEQPDSVRDIRTGAQLPADPDGWLPPAEDLYPQIVRPDLIDETP |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 2 | 3300000549 | Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled | Metagenome | Rhizosphere |
| 3 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 4 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 5 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 13 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 14 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 17 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 18 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 19 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 20 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 21 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 22 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 23 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 24 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 25 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 26 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 27 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 28 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 29 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 30 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 31 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 32 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 33 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 34 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 35 | 3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Metagenome | Rhizosphere |
| 36 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 37 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 38 | 3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 60 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 61 | 3300031665 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 | Metagenome | Rhizosphere |
| 62 | 3300031691 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA | Metagenome | Rhizosphere |
| 63 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 64 | 3300031728 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC | Metagenome | Rhizosphere |
| 65 | 3300031733 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 | Metagenome | Rhizosphere |
| 66 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 67 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 68 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 69 | 3300032133 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA | Metagenome | Rhizosphere |
| 70 | 3300032137 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC | Metagenome | Rhizosphere |
| 71 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 72 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 73 | 3300036647 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA | Metagenome | Rhizosphere |
| 74 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 75 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 76 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 77 | 3300037588 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA | Metagenome | Rhizosphere |
| 78 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 79 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 80 | 3300041404 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 | Metagenome | Rhizosphere |
| 81 | 3300041413 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 | Metagenome | Rhizosphere |
| 82 | 3300042007 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 | Metagenome | Rhizosphere |
| 83 | 3300042014 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 | Metagenome | Rhizosphere |
| 84 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 85 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 86 | 3300044706 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R | Metagenome | Rhizosphere |
| 87 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 88 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 89 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 90 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 91 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 92 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300048091 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 98 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 99 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 100 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 101 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 102 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 103 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 104 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 105 | 3300049130 | Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_B_0_control (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 106 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 107 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 108 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 109 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 110 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 111 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 112 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 113 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 114 | 3300049576 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 115 | 3300049577 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 116 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 117 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 118 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 119 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 120 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 121 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 122 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 123 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 124 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 125 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 126 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 127 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 128 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 129 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 130 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 131 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 132 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 133 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 134 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 135 | 3300053094 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere | Metagenome | Endosphere |
| 136 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 137 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
| 138 | 2643221561 | Nocardioides sp. Root151 | Isolate | Unclassified |
| 139 | 2643221567 | Phycicoccus sp. Root563 | Isolate | Unclassified |
| 140 | 2643221604 | Nocardioides sp. Root190 | Isolate | Unclassified |
| 141 | 2643221624 | Phycicoccus sp. Root101 | Isolate | Unclassified |
| 142 | 2643221681 | Aeromicrobium sp. Root472D3 | Isolate | Unclassified |
| 143 | 2643221696 | Nocardioides sp. Root140 | Isolate | Unclassified |
| 144 | 2643221697 | Aeromicrobium sp. Root495 | Isolate | Unclassified |
| 145 | 2643221961 | Aeromicrobium sp. Root236 | Isolate | Unclassified |
| 146 | 2643221962 | Aeromicrobium sp. Root344 | Isolate | Unclassified |
| 147 | 2773857762 | Nocardioides sp. SAI-095 | Isolate | Unclassified |
| 148 | 2808606365 | Phycicoccus sp. SLBN-51 | Isolate | Unclassified |
| 149 | 2808606439 | Nocardioides sp. SLBN-172 | Isolate | Unclassified |
| 150 | 2811994874 | Nocardioides sp. SLBN-35 | Isolate | Unclassified |
| 151 | 2811994878 | Nocardioides sp. SLBN-169 | Isolate | Unclassified |
| 152 | 2818991318 | Humibacillus xanthopallidus SLBN-155 | Isolate | Unclassified |
| 153 | 2861520306 | Phytomonospora endophytica DSM 45386 | Isolate | Unclassified |
| 154 | 2887478801 | Catellatospora paridis NEAU-CL2 | Isolate | Rhizosphere |
| 155 | 2891968417 | Nocardioides luteus SAI-037 | Isolate | Unclassified |
| 156 | 2984576629 | Nocardioides zeae SORGH_AS913 | Isolate | Aerial Root |
| 157 | 2990256926 | Nocardioides zeae SORGH_AS885 | Isolate | Aerial Root |
| 158 | 3001889506 | Janibacter sp. YIM B02568 | Isolate | Unclassified |
| 159 | 8001781756 | Catellatospora tritici NEAU-YM18 | Isolate | Rhizosphere |
| 160 | 8057568493 | Actinorhabdospora filicis NBRC 111898 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 87.56 |
| Metatranscriptomes | 0.52 |
| Isolates | 11.92 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 1.04 |
| Bulb | 0 |
| Endosphere | 1.55 |
| Nodule | 0 |
| Rhizoplane | 2.59 |
| Rhizosphere | 80.83 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0207695_10041516 | 3300025913 | Bacteria | 4923 |
| 2 | LJQas_1000412 | 3300000549 | Bacteria | 7231 |
| 3 | Ga0068869_100003535 | 3300005334 | Bacteria | 9591 |
| 4 | Ga0070680_100212829 | 3300005336 | Bacteria | 1631 |
| 5 | Ga0070660_100008169 | 3300005339 | Bacteria | 7315 |
| 6 | Ga0070661_100017639 | 3300005344 | Bacteria | 5067 |
| 7 | Ga0070668_100083273 | 3300005347 | Bacteria | 2511 |
| 8 | Ga0070671_100027723 | 3300005355 | Bacteria | 4664 |
| 9 | Ga0070659_100005038 | 3300005366 | Bacteria | 9470 |
| 10 | Ga0070667_100005814 | 3300005367 | Bacteria | 10292 |
| 11 | Ga0070714_100000022 | 3300005435 | Bacteria | 158523 |
| 12 | Ga0070700_100000010 | 3300005441 | Bacteria | 176885 |
| 13 | Ga0070679_100268684 | 3300005530 | Bacteria | 1660 |
| 14 | Ga0070665_100003213 | 3300005548 | Bacteria | 17576 |
| 15 | Ga0070665_100134214 | 3300005548 | Bacteria | 2477 |
| 16 | Ga0070664_100013555 | 3300005564 | Bacteria | 6641 |
| 17 | Ga0068852_100147344 | 3300005616 | Bacteria | 2185 |
| 18 | Ga0068863_100001958 | 3300005841 | Bacteria | 20461 |
| 19 | Ga0068860_100000043 | 3300005843 | Bacteria | 225862 |
| 20 | Ga0081539_10009267 | 3300005985 | Bacteria | 8276 |
| 21 | Ga0081539_10068421 | 3300005985 | Bacteria | 1916 |
| 22 | Ga0075364_10000263 | 3300006051 | Bacteria | 25539 |
| 23 | Ga0075430_100000139 | 3300006846 | Bacteria | 46337 |
| 24 | Ga0075430_100042717 | 3300006846 | Bacteria | 3833 |
| 25 | Ga0075431_100024377 | 3300006847 | Bacteria | 6198 |
| 26 | Ga0075431_100162255 | 3300006847 | Bacteria | 2298 |
| 27 | Ga0075429_100055451 | 3300006880 | Bacteria | 3448 |
| 28 | Ga0075429_100085684 | 3300006880 | Bacteria | 2746 |
| 29 | Ga0105240_10088359 | 3300009093 | Bacteria | 3792 |
| 30 | Ga0111539_10006693 | 3300009094 | Bacteria | 14839 |
| 31 | Ga0105245_10039094 | 3300009098 | Bacteria | 4223 |
| 32 | Ga0105245_10049356 | 3300009098 | Bacteria | 3769 |
| 33 | Ga0114129_10000769 | 3300009147 | Bacteria | 40967 |
| 34 | Ga0114129_10001693 | 3300009147 | Bacteria | 30058 |
| 35 | Ga0114129_10002618 | 3300009147 | Bacteria | 25047 |
| 36 | Ga0105237_10032603 | 3300009545 | Bacteria | 5274 |
| 37 | Ga0105249_10229916 | 3300009553 | Bacteria | 1829 |
| 38 | Ga0105239_10031834 | 3300010375 | Bacteria | 5796 |
| 39 | Ga0157370_10030807 | 3300013104 | Bacteria | 5254 |
| 40 | Ga0157369_10029914 | 3300013105 | Bacteria | 6013 |
| 41 | Ga0157372_10000291 | 3300013307 | Bacteria | 55930 |
| 42 | Ga0163163_10083403 | 3300014325 | Bacteria | 3201 |
| 43 | Ga0157377_10007012 | 3300014745 | Bacteria | 5411 |
| 44 | Ga0157379_10043854 | 3300014968 | Bacteria | 3993 |
| 45 | Ga0213875_10011283 | 3300021388 | Bacteria | 4451 |
| 46 | Ga0207680_10133987 | 3300025903 | Bacteria | 1635 |
| 47 | Ga0207647_10024908 | 3300025904 | Bacteria | 3939 |
| 48 | Ga0207647_10068643 | 3300025904 | Bacteria | 2145 |
| 49 | Ga0207647_10130169 | 3300025904 | Bacteria | 1479 |
| 50 | Ga0207645_10041961 | 3300025907 | Bacteria | 2928 |
| 51 | Ga0207671_10026366 | 3300025914 | Bacteria | 4357 |
| 52 | Ga0207660_10043217 | 3300025917 | Bacteria | 3166 |
| 53 | Ga0207657_10007599 | 3300025919 | Bacteria | 11097 |
| 54 | Ga0207687_10027559 | 3300025927 | Bacteria | 3813 |
| 55 | Ga0207664_10000015 | 3300025929 | Bacteria | 246475 |
| 56 | Ga0207644_10073922 | 3300025931 | Bacteria | 2500 |
| 57 | Ga0207690_10006668 | 3300025932 | Bacteria | 6842 |
| 58 | Ga0207689_10005623 | 3300025942 | Bacteria | 11169 |
| 59 | Ga0207661_10144706 | 3300025944 | Bacteria | 2049 |
| 60 | Ga0207658_10016268 | 3300025986 | Bacteria | 5115 |
| 61 | Ga0207703_10014345 | 3300026035 | Bacteria | 6180 |
| 62 | Ga0207678_10082814 | 3300026067 | Bacteria | 2745 |
| 63 | Ga0207708_10000009 | 3300026075 | Bacteria | 235909 |
| 64 | Ga0207708_10043038 | 3300026075 | Bacteria | 3441 |
| 65 | Ga0207641_10003681 | 3300026088 | Bacteria | 13502 |
| 66 | Ga0207698_10103537 | 3300026142 | Bacteria | 2366 |
| 67 | Ga0268266_10001099 | 3300028379 | Bacteria | 33884 |
| 68 | Ga0268265_10067790 | 3300028380 | Bacteria | 2764 |
| 69 | Ga0268264_10000027 | 3300028381 | Bacteria | 440852 |
| 70 | Ga0307515_10023495 | 3300028794 | Bacteria | 10799 |
| 71 | Ga0307513_10000040 | 3300031456 | Bacteria | 169846 |
| 72 | Ga0316575_10001294 | 3300031665 | Bacteria | 7985 |
| 73 | Ga0316579_10008398 | 3300031691 | Bacteria | 4302 |
| 74 | Ga0316576_10000047 | 3300031727 | Bacteria | 37553 |
| 75 | Ga0316578_10003120 | 3300031728 | Bacteria | 7486 |
| 76 | Ga0316577_10001507 | 3300031733 | Bacteria | 11040 |
| 77 | Ga0307410_10004937 | 3300031852 | Bacteria | 6990 |
| 78 | Ga0307409_100009460 | 3300031995 | Bacteria | 5988 |
| 79 | Ga0307415_100050745 | 3300032126 | Bacteria | 2813 |
| 80 | Ga0316583_10002120 | 3300032133 | Bacteria | 6821 |
| 81 | Ga0316585_10012008 | 3300032137 | Bacteria | 2560 |
| 82 | Ga0316574_0007627 | 3300035398 | Bacteria | 5943 |
| 83 | Ga0316574_0071504 | 3300035398 | Bacteria | 2191 |
| 84 | Ga0373935_0023509 | 3300035692 | Bacteria | 3787 |
| 85 | Ga0316582_0017648 | 3300036647 | Bacteria | 4134 |
| 86 | Ga0316584_0000227 | 3300036712 | Bacteria | 27831 |
| 87 | Ga0395900_0023706 | 3300037418 | Bacteria | 6279 |
| 88 | Ga0395900_0038644 | 3300037418 | Bacteria | 4920 |
| 89 | Ga0395898_0011850 | 3300037466 | Bacteria | 9033 |
| 90 | Ga0316581_0000071 | 3300037588 | Bacteria | 12413 |
| 91 | Ga0436364_0468355 | 3300037853 | Bacteria | 6493 |
| 92 | Ga0436365_1784419 | 3300039437 | Bacteria | 5608 |
| 93 | Ga0439436_0024857 | 3300041404 | Bacteria | 1765 |
| 94 | Ga0439465_0012894 | 3300041413 | Bacteria | 2613 |
| 95 | Ga0439449_0019359 | 3300042007 | Bacteria | 2551 |
| 96 | Ga0439457_001526 | 3300042014 | Bacteria | 6944 |
| 97 | Ga0466972_0014969 | 3300044658 | Bacteria | 3880 |
| 98 | Ga0466965_0007075 | 3300044683 | Bacteria | 5135 |
| 99 | Ga0466965_0085190 | 3300044683 | Bacteria | 1602 |
| 100 | Ga0466964_0012234 | 3300044706 | Bacteria | 3246 |
| 101 | Ga0466971_0017636 | 3300044719 | Bacteria | 3160 |
| 102 | Ga0466970_0011156 | 3300044765 | Bacteria | 4575 |
| 103 | Ga0466970_0054450 | 3300044765 | Bacteria | 2136 |
| 104 | Ga0466960_0009218 | 3300044901 | Bacteria | 4063 |
| 105 | Ga0466959_0119406 | 3300045049 | Bacteria | 1876 |
| 106 | Ga0466967_0007950 | 3300045976 | Bacteria | 7715 |
| 107 | Ga0495606_0003829 | 3300046507 | Bacteria | 15576 |
| 108 | Ga0495667_0111827 | 3300046559 | Bacteria | 1765 |
| 109 | Ga0495668_0000284 | 3300046616 | Bacteria | 70078 |
| 110 | Ga0495625_0003759 | 3300046660 | Bacteria | 14742 |
| 111 | Ga0495626_0000234 | 3300048091 | Bacteria | 65050 |
| 112 | Ga0496100_0062573 | 3300048903 | Bacteria | 2456 |
| 113 | Ga0496102_0001140 | 3300048905 | Bacteria | 24358 |
| 114 | Ga0496104_0341215 | 3300048907 | Bacteria | 1411 |
| 115 | Ga0496110_0046488 | 3300048913 | Bacteria | 3798 |
| 116 | Ga0496110_0131666 | 3300048913 | Bacteria | 2259 |
| 117 | Ga0496122_0115989 | 3300048925 | Bacteria | 1743 |
| 118 | Ga0496123_0052829 | 3300048926 | Bacteria | 2691 |
| 119 | Ga0496124_0099384 | 3300048927 | Bacteria | 2360 |
| 120 | Ga0496126_0143258 | 3300048929 | Bacteria | 2055 |
| 121 | Ga0501310_000218 | 3300049130 | Bacteria | 5470 |
| 122 | Ga0501031_0003820 | 3300049568 | Bacteria | 9691 |
| 123 | Ga0501031_0010604 | 3300049568 | Bacteria | 6000 |
| 124 | Ga0501032_0002623 | 3300049569 | Bacteria | 14052 |
| 125 | Ga0501032_0011467 | 3300049569 | Bacteria | 6366 |
| 126 | Ga0501033_0014384 | 3300049570 | Bacteria | 6011 |
| 127 | Ga0501034_0004285 | 3300049571 | Bacteria | 15913 |
| 128 | Ga0501034_0037909 | 3300049571 | Bacteria | 4882 |
| 129 | Ga0501036_0001416 | 3300049572 | Bacteria | 18431 |
| 130 | Ga0501036_0004317 | 3300049572 | Bacteria | 11475 |
| 131 | Ga0501037_0030277 | 3300049573 | Bacteria | 4000 |
| 132 | Ga0501038_0003929 | 3300049574 | Bacteria | 13814 |
| 133 | Ga0501038_0004110 | 3300049574 | Bacteria | 13537 |
| 134 | Ga0501039_0030388 | 3300049575 | Bacteria | 4166 |
| 135 | Ga0501040_0017947 | 3300049576 | Bacteria | 4697 |
| 136 | Ga0501041_0006836 | 3300049577 | Bacteria | 6684 |
| 137 | Ga0501042_0003105 | 3300049578 | Bacteria | 10336 |
| 138 | Ga0501043_0004022 | 3300049579 | Bacteria | 12022 |
| 139 | Ga0501043_0062181 | 3300049579 | Bacteria | 2932 |
| 140 | Ga0501046_0017509 | 3300049580 | Bacteria | 5976 |
| 141 | Ga0501046_0027573 | 3300049580 | Bacteria | 4633 |
| 142 | Ga0501047_0003168 | 3300049581 | Bacteria | 15594 |
| 143 | Ga0501047_0169336 | 3300049581 | Bacteria | 2053 |
| 144 | Ga0501048_0000017 | 3300049582 | Bacteria | 72572 |
| 145 | Ga0501048_0022258 | 3300049582 | Bacteria | 4638 |
| 146 | Ga0501070_0021410 | 3300049586 | Bacteria | 5424 |
| 147 | Ga0501073_0139855 | 3300049589 | Bacteria | 1678 |
| 148 | Ga0501074_0021448 | 3300049590 | Bacteria | 4690 |
| 149 | Ga0501075_0009792 | 3300049591 | Bacteria | 6717 |
| 150 | Ga0501076_0000863 | 3300049592 | Bacteria | 19702 |
| 151 | Ga0501083_0129675 | 3300049744 | Bacteria | 1653 |
| 152 | Ga0501035_0001542 | 3300049822 | Bacteria | 23442 |
| 153 | Ga0501035_0001668 | 3300049822 | Bacteria | 22446 |
| 154 | Ga0501044_0009429 | 3300049823 | Bacteria | 10631 |
| 155 | Ga0501044_0036095 | 3300049823 | Bacteria | 5173 |
| 156 | nmdc:mga00v17_334_c1 | 3300050491 | Bacteria | 26514 |
| 157 | nmdc:mga05p37_134788_c1 | 3300050507 | Bacteria | 3029 |
| 158 | nmdc:mga05p37_6450_c1 | 3300050507 | Bacteria | 13833 |
| 159 | nmdc:mga05p37_87169_c1 | 3300050507 | Bacteria | 3848 |
| 160 | nmdc:mga09592_16977_c1 | 3300050508 | Bacteria | 5956 |
| 161 | nmdc:mga09592_79249_c1 | 3300050508 | Bacteria | 2796 |
| 162 | nmdc:mga09592_8_c2 | 3300050508 | Bacteria | 68121 |
| 163 | nmdc:mga0qj67_21_c2 | 3300050509 | Bacteria | 93192 |
| 164 | nmdc:mga0qj67_42979_c1 | 3300050509 | Bacteria | 3559 |
| 165 | nmdc:mga06r32_14_c2 | 3300050510 | Bacteria | 34538 |
| 166 | nmdc:mga06r32_220759_c1 | 3300050510 | Bacteria | 1884 |
| 167 | nmdc:mga08y16_22277_c1 | 3300050511 | Bacteria | 6685 |
| 168 | Ga0500566_0089189 | 3300053094 | Bacteria | 1706 |
| 169 | Ga0501082_0011024 | 3300060353 | Bacteria | 7774 |
| 170 | Ga0530510_0008848 | 3300061734 | Bacteria | 7046 |
| 171 | 2643825860 | 2643221561 | Bacteria | 4984412 |
| 172 | 2643849967 | 2643221567 | Bacteria | 4163945 |
| 173 | 2644035799 | 2643221604 | Bacteria | 5014917 |
| 174 | 2644135969 | 2643221624 | Bacteria | 4384879 |
| 175 | 2644456891 | 2643221681 | Bacteria | 3707866 |
| 176 | 2644531852 | 2643221696 | Bacteria | 5431823 |
| 177 | 2644537426 | 2643221697 | Bacteria | 3575694 |
| 178 | 2645719851 | 2643221961 | Bacteria | 3919167 |
| 179 | 2645726729 | 2643221962 | Bacteria | 3874254 |
| 180 | 2774392280 | 2773857762 | Bacteria | 5971770 |
| 181 | 2808874186 | 2808606365 | Bacteria | 4301966 |
| 182 | 2809196087 | 2808606439 | Bacteria | 5952208 |
| 183 | 2812333180 | 2811994874 | Bacteria | 5367947 |
| 184 | 2812351786 | 2811994878 | Bacteria | 5992952 |
| 185 | 2819427611 | 2818991318 | Bacteria | 5266538 |
| 186 | 2861527731 | 2861520306 | Bacteria | 8348283 |
| 187 | 2887485893 | 2887478801 | Bacteria | 8972725 |
| 188 | 2891970585 | 2891968417 | Bacteria | 5821697 |
| 189 | 2984580304 | 2984576629 | Bacteria | 4248407 |
| 190 | 2990259154 | 2990256926 | Bacteria | 4252839 |
| 191 | 3001891400 | 3001889506 | Bacteria | 2975194 |
| 192 | 8001786792 | 8001781756 | Bacteria | 9586736 |
| 193 | 8057568618 | 8057568493 | Bacteria | 7221719 |
| 194 | Ga0207695_10041516 | |||
| 195 | LJQas_1000412 | |||
| 196 | Ga0068869_100003535 | |||
| 197 | Ga0070680_100212829 | |||
| 198 | Ga0070660_100008169 | |||
| 199 | Ga0070661_100017639 | |||
| 200 | Ga0070668_100083273 | |||
| 201 | Ga0070671_100027723 | |||
| 202 | Ga0070659_100005038 | |||
| 203 | Ga0070667_100005814 | |||
| 204 | Ga0070714_100000022 | |||
| 205 | Ga0070700_100000010 | |||
| 206 | Ga0070679_100268684 | |||
| 207 | Ga0070665_100003213 | |||
| 208 | Ga0070665_100134214 | |||
| 209 | Ga0070664_100013555 | |||
| 210 | Ga0068852_100147344 | |||
| 211 | Ga0068863_100001958 | |||
| 212 | Ga0068860_100000043 | |||
| 213 | Ga0081539_10009267 | |||
| 214 | Ga0081539_10068421 | |||
| 215 | Ga0075364_10000263 | |||
| 216 | Ga0075430_100000139 | |||
| 217 | Ga0075430_100042717 | |||
| 218 | Ga0075431_100024377 | |||
| 219 | Ga0075431_100162255 | |||
| 220 | Ga0075429_100055451 | |||
| 221 | Ga0075429_100085684 | |||
| 222 | Ga0105240_10088359 | |||
| 223 | Ga0111539_10006693 | |||
| 224 | Ga0105245_10039094 | |||
| 225 | Ga0105245_10049356 | |||
| 226 | Ga0114129_10000769 | |||
| 227 | Ga0114129_10001693 | |||
| 228 | Ga0114129_10002618 | |||
| 229 | Ga0105237_10032603 | |||
| 230 | Ga0105249_10229916 | |||
| 231 | Ga0105239_10031834 | |||
| 232 | Ga0157370_10030807 | |||
| 233 | Ga0157369_10029914 | |||
| 234 | Ga0157372_10000291 | |||
| 235 | Ga0163163_10083403 | |||
| 236 | Ga0157377_10007012 | |||
| 237 | Ga0157379_10043854 | |||
| 238 | Ga0213875_10011283 | |||
| 239 | Ga0207680_10133987 | |||
| 240 | Ga0207647_10024908 | |||
| 241 | Ga0207647_10068643 | |||
| 242 | Ga0207647_10130169 | |||
| 243 | Ga0207645_10041961 | |||
| 244 | Ga0207671_10026366 | |||
| 245 | Ga0207660_10043217 | |||
| 246 | Ga0207657_10007599 | |||
| 247 | Ga0207687_10027559 | |||
| 248 | Ga0207664_10000015 | |||
| 249 | Ga0207644_10073922 | |||
| 250 | Ga0207690_10006668 | |||
| 251 | Ga0207689_10005623 | |||
| 252 | Ga0207661_10144706 | |||
| 253 | Ga0207658_10016268 | |||
| 254 | Ga0207703_10014345 | |||
| 255 | Ga0207678_10082814 | |||
| 256 | Ga0207708_10000009 | |||
| 257 | Ga0207708_10043038 | |||
| 258 | Ga0207641_10003681 | |||
| 259 | Ga0207698_10103537 | |||
| 260 | Ga0268266_10001099 | |||
| 261 | Ga0268265_10067790 | |||
| 262 | Ga0268264_10000027 | |||
| 263 | Ga0307515_10023495 | |||
| 264 | Ga0307513_10000040 | |||
| 265 | Ga0316575_10001294 | |||
| 266 | Ga0316579_10008398 | |||
| 267 | Ga0316576_10000047 | |||
| 268 | Ga0316578_10003120 | |||
| 269 | Ga0316577_10001507 | |||
| 270 | Ga0307410_10004937 | |||
| 271 | Ga0307409_100009460 | |||
| 272 | Ga0307415_100050745 | |||
| 273 | Ga0316583_10002120 | |||
| 274 | Ga0316585_10012008 | |||
| 275 | Ga0316574_0007627 | |||
| 276 | Ga0316574_0071504 | |||
| 277 | Ga0373935_0023509 | |||
| 278 | Ga0316582_0017648 | |||
| 279 | Ga0316584_0000227 | |||
| 280 | Ga0395900_0023706 | |||
| 281 | Ga0395900_0038644 | |||
| 282 | Ga0395898_0011850 | |||
| 283 | Ga0316581_0000071 | |||
| 284 | Ga0436364_0468355 | |||
| 285 | Ga0436365_1784419 | |||
| 286 | Ga0439436_0024857 | |||
| 287 | Ga0439465_0012894 | |||
| 288 | Ga0439449_0019359 | |||
| 289 | Ga0439457_001526 | |||
| 290 | Ga0466972_0014969 | |||
| 291 | Ga0466965_0007075 | |||
| 292 | Ga0466965_0085190 | |||
| 293 | Ga0466964_0012234 | |||
| 294 | Ga0466971_0017636 | |||
| 295 | Ga0466970_0011156 | |||
| 296 | Ga0466970_0054450 | |||
| 297 | Ga0466960_0009218 | |||
| 298 | Ga0466959_0119406 | |||
| 299 | Ga0466967_0007950 | |||
| 300 | Ga0495606_0003829 | |||
| 301 | Ga0495667_0111827 | |||
| 302 | Ga0495668_0000284 | |||
| 303 | Ga0495625_0003759 | |||
| 304 | Ga0495626_0000234 | |||
| 305 | Ga0496100_0062573 | |||
| 306 | Ga0496102_0001140 | |||
| 307 | Ga0496104_0341215 | |||
| 308 | Ga0496110_0046488 | |||
| 309 | Ga0496110_0131666 | |||
| 310 | Ga0496122_0115989 | |||
| 311 | Ga0496123_0052829 | |||
| 312 | Ga0496124_0099384 | |||
| 313 | Ga0496126_0143258 | |||
| 314 | Ga0501310_000218 | |||
| 315 | Ga0501031_0003820 | |||
| 316 | Ga0501031_0010604 | |||
| 317 | Ga0501032_0002623 | |||
| 318 | Ga0501032_0011467 | |||
| 319 | Ga0501033_0014384 | |||
| 320 | Ga0501034_0004285 | |||
| 321 | Ga0501034_0037909 | |||
| 322 | Ga0501036_0001416 | |||
| 323 | Ga0501036_0004317 | |||
| 324 | Ga0501037_0030277 | |||
| 325 | Ga0501038_0003929 | |||
| 326 | Ga0501038_0004110 | |||
| 327 | Ga0501039_0030388 | |||
| 328 | Ga0501040_0017947 | |||
| 329 | Ga0501041_0006836 | |||
| 330 | Ga0501042_0003105 | |||
| 331 | Ga0501043_0004022 | |||
| 332 | Ga0501043_0062181 | |||
| 333 | Ga0501046_0017509 | |||
| 334 | Ga0501046_0027573 | |||
| 335 | Ga0501047_0003168 | |||
| 336 | Ga0501047_0169336 | |||
| 337 | Ga0501048_0000017 | |||
| 338 | Ga0501048_0022258 | |||
| 339 | Ga0501070_0021410 | |||
| 340 | Ga0501073_0139855 | |||
| 341 | Ga0501074_0021448 | |||
| 342 | Ga0501075_0009792 | |||
| 343 | Ga0501076_0000863 | |||
| 344 | Ga0501083_0129675 | |||
| 345 | Ga0501035_0001542 | |||
| 346 | Ga0501035_0001668 | |||
| 347 | Ga0501044_0009429 | |||
| 348 | Ga0501044_0036095 | |||
| 349 | nmdc:mga00v17_334_c1 | |||
| 350 | nmdc:mga05p37_134788_c1 | |||
| 351 | nmdc:mga05p37_6450_c1 | |||
| 352 | nmdc:mga05p37_87169_c1 | |||
| 353 | nmdc:mga09592_16977_c1 | |||
| 354 | nmdc:mga09592_79249_c1 | |||
| 355 | nmdc:mga09592_8_c2 | |||
| 356 | nmdc:mga0qj67_21_c2 | |||
| 357 | nmdc:mga0qj67_42979_c1 | |||
| 358 | nmdc:mga06r32_14_c2 | |||
| 359 | nmdc:mga06r32_220759_c1 | |||
| 360 | nmdc:mga08y16_22277_c1 | |||
| 361 | Ga0500566_0089189 | |||
| 362 | Ga0501082_0011024 | |||
| 363 | Ga0530510_0008848 | |||
| 364 | 2643825860 | |||
| 365 | 2643849967 | |||
| 366 | 2644035799 | |||
| 367 | 2644135969 | |||
| 368 | 2644456891 | |||
| 369 | 2644531852 | |||
| 370 | 2644537426 | |||
| 371 | 2645719851 | |||
| 372 | 2645726729 | |||
| 373 | 2774392280 | |||
| 374 | 2808874186 | |||
| 375 | 2809196087 | |||
| 376 | 2812333180 | |||
| 377 | 2812351786 | |||
| 378 | 2819427611 | |||
| 379 | 2861527731 | |||
| 380 | 2887485893 | |||
| 381 | 2891970585 | |||
| 382 | 2984580304 | |||
| 383 | 2990259154 | |||
| 384 | 3001891400 | |||
| 385 | 8001786792 | |||
| 386 | 8057568618 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 8shd-assembly1.cif.gz_N | cct g beta 5 complex closed state 10 | 0.834 | 383 | 407 |
| 7lp4-assembly1.cif.gz_A | structure of nedd4l ww3 domain | 0.812 | 384 | 410 |
| 3net-assembly1.cif.gz_A | crystal structure of histidyl-trna synthetase from nostoc sp. pcc 7120 | 0.8099 | 7 | 408 |
| 1v95-assembly1.cif.gz_A | solution structure of anticodon binding domain from nuclear receptor coactivator 5 (human kiaa1637 protein) | 0.8086 | 332 | 410 |
| 8g83-assembly1.cif.gz_A | structure of nad+ consuming protein acinetobacter baumannii tir domain | 0.7799 | 333 | 381 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P38431_103_143_2.20.25.350 | Mainly Beta;Single Sheet;N-terminal domain of TfIIb; | 0.907 | 384 | 409 | 2.20.25.350 |
| 3netA02 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Anticodon-binding domain | 0.8867 | 331 | 408 | 3.40.50.800 |
| af_B9F3M7_412_749_2.130.10.10 | Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.8809 | 383 | 409 | 2.130.10.10 |
| af_A0A0P0YCS0_10_216_2.120.10.80 | Mainly Beta;6 Propeller;Neuraminidase;Kelch-type beta propeller | 0.8768 | 384 | 409 | 2.120.10.80 |
| 2el9D02 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Anticodon-binding domain | 0.8751 | 333 | 410 | 3.40.50.800 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A318P6S4-F1-model_v4 | histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) | 0.9243 | 105 | 425 |
GO:0004821
GO:0005737 GO:0006418 |
| AF-A0A318P6S4-F1-model_v4 | histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) | 0.8898 | 105 | 425 |
GO:0004821
GO:0005737 GO:0006418 |
| AF-A0A4Q5PG63-F1-model_v4 | histidine--tRNA ligase (EC 6.1.1.21) | 0.883 | 103 | 407 |
GO:0004821
GO:0005737 GO:0006418 |
| AF-A0A4Q4CLZ3-F1-model_v4 | histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) | 0.88 | 134 | 438 |
GO:0004821
GO:0005737 GO:0006418 |
| AF-M1WW86-F1-model_v4 | deleted | 0.8789 | 122 | 410 |
|