F296920

General Info

Members Datasets Scaffolds Average Seq Length
193 121 193 110

Family's Representative Sequence

Representative Sequence 3300005718|Ga0068866_10245186|Ga0068866_102451861
Length 125
Sequence MATRSFRPRRRQREGTGGQVDTTTAGGASKLEALVAEAKTARAARAVGYRERSLALHGWICAKCAREFEADNLHLLTVHHKDGNHDRNPPDGSNWENLCIYCHEAEHTTHTLGDYLTGRDIKRDR

Samples

Sample ID Description Type Environment
1 3300004801 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
2 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
3 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
4 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
5 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
6 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
7 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
12 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
13 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
16 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
17 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
18 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
19 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
20 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
21 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
22 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
23 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
24 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
25 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
26 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
27 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
28 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
29 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
30 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
31 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
32 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
33 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
34 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
35 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
37 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
39 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
40 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
41 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
42 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
43 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
44 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
45 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
46 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
47 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
48 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
72 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
76 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
77 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
78 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
79 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
80 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
81 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
82 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
83 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
84 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
85 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
86 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
87 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
88 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
89 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
90 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
91 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
92 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
93 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
94 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
95 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
96 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
97 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
98 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
99 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
100 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
101 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
102 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
103 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
104 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
105 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
106 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
107 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
108 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
109 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
110 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
111 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
112 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
113 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
115 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
116 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
117 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
118 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
119 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
120 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
121 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.48
Metatranscriptomes 0.52
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.52
Rhizosphere 98.96
Stem 0
Stem Tuber 0
Unclassified 0.52

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0058860_11797478 3300004801 Bacteria 1095
2 Ga0070676_10244317 3300005328 Bacteria 1195
3 Ga0070687_100282782 3300005343 Bacteria 1045
4 Ga0070668_100112611 3300005347 Bacteria 2167
5 Ga0070668_100283280 3300005347 Bacteria 1385
6 Ga0070668_100384709 3300005347 Bacteria 1195
7 Ga0070668_100804596 3300005347 Bacteria 835
8 Ga0070669_100067690 3300005353 Bacteria 2635
9 Ga0070675_100039741 3300005354 Bacteria 3840
10 Ga0070671_101178414 3300005355 Bacteria 674
11 Ga0070671_101469014 3300005355 Bacteria 603
12 Ga0070674_100426671 3300005356 Bacteria 1089
13 Ga0070674_100747118 3300005356 Bacteria 840
14 Ga0070673_100863476 3300005364 Bacteria 838
15 Ga0070667_100964902 3300005367 Bacteria 795
16 Ga0070708_100318590 3300005445 Bacteria 1465
17 Ga0070708_101066878 3300005445 Bacteria 757
18 Ga0070662_100761192 3300005457 Bacteria 822
19 Ga0070706_100328567 3300005467 Bacteria 1426
20 Ga0070706_101901333 3300005467 Bacteria 540
21 Ga0070698_100652363 3300005471 Bacteria 994
22 Ga0070699_100445299 3300005518 Bacteria 1174
23 Ga0070697_100134433 3300005536 Bacteria 2076
24 Ga0070697_101139324 3300005536 Bacteria 695
25 Ga0070696_100201919 3300005546 Bacteria 1484
26 Ga0070696_100687939 3300005546 Bacteria 832
27 Ga0070665_100184672 3300005548 Bacteria 2086
28 Ga0070665_100274729 3300005548 Bacteria 1687
29 Ga0070704_101451827 3300005549 Bacteria 630
30 Ga0070664_100333224 3300005564 Bacteria 1377
31 Ga0070664_101403467 3300005564 Bacteria 660
32 Ga0068859_101036421 3300005617 Bacteria 901
33 Ga0068859_101869384 3300005617 Bacteria 663
34 Ga0068864_101354937 3300005618 Bacteria 713
35 Ga0068866_10245186 3300005718 Bacteria 1093
36 Ga0068861_100296239 3300005719 Bacteria 1399
37 Ga0068863_100509797 3300005841 Bacteria 1185
38 Ga0068858_100033128 3300005842 Bacteria 4798
39 Ga0068858_100054778 3300005842 Bacteria 3688
40 Ga0068858_100831864 3300005842 Bacteria 901
41 Ga0068860_100080521 3300005843 Bacteria 3097
42 Ga0068860_100899949 3300005843 Bacteria 901
43 Ga0068860_101357107 3300005843 Bacteria 732
44 Ga0068862_100090968 3300005844 Bacteria 2657
45 Ga0068862_100243157 3300005844 Bacteria 1637
46 Ga0068862_100262571 3300005844 Bacteria 1577
47 Ga0068862_100612140 3300005844 Bacteria 1047
48 Ga0081539_10106682 3300005985 Bacteria 1417
49 Ga0070715_10018535 3300006163 Bacteria 2654
50 Ga0070712_100694788 3300006175 Bacteria 867
51 Ga0070712_101378729 3300006175 Bacteria 615
52 Ga0075433_10199138 3300006852 Bacteria 1781
53 Ga0075433_10778168 3300006852 Bacteria 837
54 Ga0075434_100195879 3300006871 Bacteria 2040
55 Ga0075434_100844117 3300006871 Bacteria 932
56 Ga0075434_101014787 3300006871 Bacteria 844
57 Ga0068865_101997835 3300006881 Bacteria 526
58 Ga0097620_101036389 3300006931 Bacteria 901
59 Ga0097620_101728926 3300006931 Bacteria 691
60 Ga0097620_101869379 3300006931 Bacteria 663
61 Ga0075435_100113116 3300007076 Bacteria 2259
62 Ga0111539_10277988 3300009094 Bacteria 1948
63 Ga0111539_11872788 3300009094 Bacteria 696
64 Ga0105247_11283744 3300009101 Bacteria 587
65 Ga0105248_10990453 3300009177 Bacteria 950
66 Ga0105248_11087113 3300009177 Bacteria 904
67 Ga0105249_10298620 3300009553 Bacteria 1614
68 Ga0105249_10873775 3300009553 Bacteria 965
69 Ga0157373_10575116 3300013100 Bacteria 819
70 Ga0157378_10629942 3300013297 Bacteria 1086
71 Ga0157378_11117115 3300013297 Bacteria 826
72 Ga0163162_10117669 3300013306 Bacteria 2759
73 Ga0157375_10408064 3300013308 Bacteria 1525
74 Ga0157375_11141750 3300013308 Bacteria 913
75 Ga0157380_10937537 3300014326 Unclassified 895
76 Ga0157380_11384049 3300014326 Bacteria 753
77 Ga0157379_10000300 3300014968 Bacteria 39178
78 Ga0157379_10249054 3300014968 Bacteria 1612
79 Ga0157379_11812232 3300014968 Bacteria 600
80 Ga0157376_10039428 3300014969 Bacteria 3852
81 Ga0157376_11359907 3300014969 Bacteria 741
82 Ga0207642_10238842 3300025899 Bacteria 1025
83 Ga0207685_10046849 3300025905 Bacteria 1647
84 Ga0207699_11477077 3300025906 Bacteria 503
85 Ga0207684_11244440 3300025910 Bacteria 615
86 Ga0207693_11000729 3300025915 Bacteria 638
87 Ga0207646_10144044 3300025922 Bacteria 2147
88 Ga0207681_10286765 3300025923 Bacteria 1298
89 Ga0207681_10375075 3300025923 Bacteria 1144
90 Ga0207681_10759738 3300025923 Bacteria 808
91 Ga0207650_10434167 3300025925 Bacteria 1091
92 Ga0207650_10996682 3300025925 Bacteria 712
93 Ga0207659_10099719 3300025926 Bacteria 2187
94 Ga0207670_11034742 3300025936 Bacteria 692
95 Ga0207669_10271197 3300025937 Bacteria 1275
96 Ga0207669_10842195 3300025937 Bacteria 763
97 Ga0207665_10051285 3300025939 Bacteria 2776
98 Ga0207691_10552026 3300025940 Bacteria 977
99 Ga0207691_10713752 3300025940 Bacteria 845
100 Ga0207691_10919786 3300025940 Unclassified 732
101 Ga0207679_10466820 3300025945 Bacteria 1122
102 Ga0207679_11137375 3300025945 Bacteria 716
103 Ga0207679_11176740 3300025945 Bacteria 704
104 Ga0207651_10174998 3300025960 Bacteria 1697
105 Ga0207651_10438628 3300025960 Bacteria 1118
106 Ga0207712_10234009 3300025961 Bacteria 1476
107 Ga0207712_12038376 3300025961 Bacteria 513
108 Ga0207668_10309850 3300025972 Bacteria 1306
109 Ga0207668_10370126 3300025972 Bacteria 1203
110 Ga0207668_10751528 3300025972 Bacteria 860
111 Ga0207640_11210237 3300025981 Bacteria 672
112 Ga0207658_10297684 3300025986 Bacteria 1389
113 Ga0207677_10312391 3300026023 Bacteria 1303
114 Ga0207677_12036051 3300026023 Bacteria 534
115 Ga0207703_10211934 3300026035 Bacteria 1728
116 Ga0207703_11023779 3300026035 Bacteria 792
117 Ga0207703_11111005 3300026035 Bacteria 759
118 Ga0207708_10667465 3300026075 Bacteria 886
119 Ga0207641_10495494 3300026088 Bacteria 1186
120 Ga0207641_11399972 3300026088 Bacteria 700
121 Ga0207641_11431059 3300026088 Bacteria 692
122 Ga0207428_10937508 3300027907 Bacteria 610
123 Ga0268266_10187786 3300028379 Bacteria 1886
124 Ga0268266_10557146 3300028379 Bacteria 1099
125 Ga0268266_11278651 3300028379 Bacteria 709
126 Ga0268265_10240258 3300028380 Bacteria 1598
127 Ga0268265_10482794 3300028380 Bacteria 1164
128 Ga0268265_11371794 3300028380 Unclassified 708
129 Ga0268264_10308195 3300028381 Bacteria 1493
130 Ga0268264_10571281 3300028381 Bacteria 1111
131 Ga0265318_10020023 3300028577 Bacteria 2706
132 Ga0265330_10094316 3300031235 Bacteria 1283
133 Ga0265325_10082188 3300031241 Bacteria 1599
134 Ga0265329_10004943 3300031242 Bacteria 5456
135 Ga0265340_10468102 3300031247 Bacteria 555
136 Ga0265339_10000943 3300031249 Bacteria 22325
137 Ga0265339_10038043 3300031249 Bacteria 2686
138 Ga0265331_10108596 3300031250 Bacteria 1273
139 Ga0265316_10784676 3300031344 Unclassified 669
140 Ga0265314_10002753 3300031711 Bacteria 17558
141 Ga0265342_10014759 3300031712 Bacteria 5174
142 Ga0307416_102581548 3300032002 Bacteria 606
143 Ga0307415_101770688 3300032126 Unclassified 597
144 Ga0373934_0065106 3300035086 Bacteria 1455
145 Ga0373944_0260830 3300035089 Bacteria 642
146 Ga0373923_0085779 3300035111 Bacteria 1371
147 Ga0373932_0082078 3300035112 Bacteria 1020
148 Ga0373936_0159517 3300035113 Bacteria 982
149 Ga0373953_0015527 3300035117 Bacteria 2762
150 Ga0373954_0013586 3300035118 Bacteria 3630
151 Ga0373956_0064227 3300035119 Bacteria 1666
152 Ga0373943_0088755 3300035170 Bacteria 1598
153 Ga0373955_0233208 3300035172 Bacteria 1101
154 Ga0373924_0130837 3300035410 Bacteria 1092
155 Ga0373931_0850718 3300035691 Bacteria 611
156 Ga0373935_0018635 3300035692 Bacteria 4226
157 Ga0373935_0032659 3300035692 Bacteria 3234
158 Ga0373927_0120232 3300035695 Bacteria 1714
159 Ga0373933_0008043 3300035724 Bacteria 5754
160 Ga0373947_0014239 3300035725 Bacteria 4561
161 Ga0373947_0036143 3300035725 Bacteria 2928
162 Ga0373937_0023191 3300036401 Bacteria 5587
163 Ga0373925_0009169 3300037068 Bacteria 7203
164 Ga0373925_0085444 3300037068 Bacteria 2405
165 Ga0373925_0743065 3300037068 Bacteria 809
166 Ga0451577_0043268 3300042876 Bacteria 4035
167 Ga0453683_0000675 3300044673 Bacteria 36253
168 Ga0453683_0644216 3300044673 Bacteria 692
169 Ga0453684_2392161 3300044712 Unclassified 523
170 Ga0451576_0000453 3300045051 Bacteria 93077
171 Ga0451576_0120712 3300045051 Bacteria 2729
172 Ga0495580_0025384 3300046472 Bacteria 4331
173 Ga0495580_0197791 3300046472 Bacteria 1386
174 Ga0495658_0127653 3300046683 Unclassified 1545
175 Ga0495658_0184113 3300046683 Bacteria 1297
176 Ga0495676_0408783 3300047321 Bacteria 900
177 Ga0496108_0816240 3300048911 Bacteria 804
178 Ga0501040_0613858 3300049576 Bacteria 786
179 Ga0501073_0486531 3300049589 Bacteria 853
180 nmdc:mga05p37_1078136_c1 3300050507 Bacteria 844
181 nmdc:mga09592_946150_c1 3300050508 Bacteria 722
182 nmdc:mga08y16_26800_c1 3300050511 Bacteria 6073
183 nmdc:mga0n895_1058387_c1 3300050512 Bacteria 790
184 nmdc:mga0n895_1090212_c1 3300050512 Bacteria 776
185 nmdc:mga0n895_1233319_c1 3300050512 Bacteria 721
186 nmdc:mga0n895_138689_c1 3300050512 Bacteria 2459
187 nmdc:mga0n895_892433_c1 3300050512 Bacteria 875
188 nmdc:mga08x19_163007_c1 3300050514 Bacteria 1515
189 nmdc:mga08x19_340482_c1 3300050514 Bacteria 1046
190 nmdc:mga08x19_620143_c1 3300050514 Bacteria 767
191 nmdc:mga0a205_170212_c1 3300050515 Bacteria 2074
192 nmdc:mga0a205_204052_c1 3300050515 Bacteria 1866
193 Ga0501082_0337692 3300060353 Bacteria 1313

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300026023 Ga0207677_12036051 Ga0207677_120360512 90
2 3300044712 Ga0453684_2392161 Ga0453684_2392161_223_513 90
3 3300035118 Ga0373954_0013586 Ga0373954_0013586_1622_1933 95
4 3300025906 Ga0207699_11477077 Ga0207699_114770771 96
5 3300050514 nmdc:mga08x19_340482_c1 nmdc:mga08x19_340482_c1_701_1030 96
6 3300005328 Ga0070676_10244317 Ga0070676_102443172 97
7 3300005343 Ga0070687_100282782 Ga0070687_1002827822 97
8 3300005347 Ga0070668_100384709 Ga0070668_1003847091 97
9 3300005356 Ga0070674_100426671 Ga0070674_1004266712 97
10 3300005364 Ga0070673_100863476 Ga0070673_1008634762 97
11 3300005367 Ga0070667_100964902 Ga0070667_1009649022 97
12 3300005546 Ga0070696_100687939 Ga0070696_1006879391 97
13 3300005548 Ga0070665_100274729 Ga0070665_1002747292 97
14 3300005564 Ga0070664_100333224 Ga0070664_1003332242 97
15 3300005618 Ga0068864_101354937 Ga0068864_1013549372 97
16 3300006852 Ga0075433_10778168 Ga0075433_107781682 97
17 3300006871 Ga0075434_101014787 Ga0075434_1010147872 97
18 3300013100 Ga0157373_10575116 Ga0157373_105751162 97
19 3300013308 Ga0157375_11141750 Ga0157375_111417502 97
20 3300025923 Ga0207681_10375075 Ga0207681_103750752 97
21 3300025937 Ga0207669_10271197 Ga0207669_102711972 97
22 3300025940 Ga0207691_10552026 Ga0207691_105520262 97
23 3300025945 Ga0207679_11137375 Ga0207679_111373752 97
24 3300025960 Ga0207651_10174998 Ga0207651_101749981 97
25 3300025960 Ga0207651_10438628 Ga0207651_104386282 97
26 3300025981 Ga0207640_11210237 Ga0207640_112102372 97
27 3300026035 Ga0207703_11111005 Ga0207703_111110051 97
28 3300026088 Ga0207641_11431059 Ga0207641_114310592 97
29 3300028379 Ga0268266_11278651 Ga0268266_112786512 97
30 3300035113 Ga0373936_0159517 Ga0373936_0159517_11_346 97
31 3300035692 Ga0373935_0018635 Ga0373935_0018635_622_957 97
32 3300035725 Ga0373947_0014239 Ga0373947_0014239_2738_3073 97
33 3300037068 Ga0373925_0085444 Ga0373925_0085444_268_603 97
34 3300045051 Ga0451576_0120712 Ga0451576_0120712_339_665 97
35 3300047321 Ga0495676_0408783 Ga0495676_0408783_469_804 97
36 3300050512 nmdc:mga0n895_1058387_c1 nmdc:mga0n895_1058387_c1_22_345 97
37 3300050512 nmdc:mga0n895_1090212_c1 nmdc:mga0n895_1090212_c1_151_486 97
38 3300050512 nmdc:mga0n895_1233319_c1 nmdc:mga0n895_1233319_c1_174_506 97
39 3300050515 nmdc:mga0a205_170212_c1 nmdc:mga0a205_170212_c1_1548_1871 97
40 3300005347 Ga0070668_100112611 Ga0070668_1001126113 98
41 3300005347 Ga0070668_100283280 Ga0070668_1002832802 98
42 3300005347 Ga0070668_100804596 Ga0070668_1008045961 98
43 3300005353 Ga0070669_100067690 Ga0070669_1000676904 98
44 3300005354 Ga0070675_100039741 Ga0070675_1000397414 98
45 3300005355 Ga0070671_101178414 Ga0070671_1011784141 98
46 3300005355 Ga0070671_101469014 Ga0070671_1014690141 98
47 3300005356 Ga0070674_100747118 Ga0070674_1007471181 98
48 3300005445 Ga0070708_100318590 Ga0070708_1003185902 98
49 3300005445 Ga0070708_101066878 Ga0070708_1010668782 98
50 3300005457 Ga0070662_100761192 Ga0070662_1007611922 98
51 3300005467 Ga0070706_100328567 Ga0070706_1003285672 98
52 3300005467 Ga0070706_101901333 Ga0070706_1019013331 98
53 3300005471 Ga0070698_100652363 Ga0070698_1006523632 98
54 3300005518 Ga0070699_100445299 Ga0070699_1004452992 98
55 3300005564 Ga0070664_101403467 Ga0070664_1014034672 98
56 3300005617 Ga0068859_101036421 Ga0068859_1010364211 98
57 3300005719 Ga0068861_100296239 Ga0068861_1002962392 98
58 3300005842 Ga0068858_100033128 Ga0068858_1000331287 98
59 3300005842 Ga0068858_100831864 Ga0068858_1008318641 98
60 3300005843 Ga0068860_100080521 Ga0068860_1000805213 98
61 3300005843 Ga0068860_100899949 Ga0068860_1008999492 98
62 3300005844 Ga0068862_100090968 Ga0068862_1000909684 98
63 3300005985 Ga0081539_10106682 Ga0081539_101066822 98
64 3300006163 Ga0070715_10018535 Ga0070715_100185352 98
65 3300006175 Ga0070712_100694788 Ga0070712_1006947882 98
66 3300006175 Ga0070712_101378729 Ga0070712_1013787292 98
67 3300006852 Ga0075433_10199138 Ga0075433_101991382 98
68 3300006871 Ga0075434_100195879 Ga0075434_1001958792 98
69 3300006871 Ga0075434_100844117 Ga0075434_1008441172 98
70 3300006881 Ga0068865_101997835 Ga0068865_1019978351 98
71 3300006931 Ga0097620_101036389 Ga0097620_1010363891 98
72 3300006931 Ga0097620_101728926 Ga0097620_1017289262 98
73 3300007076 Ga0075435_100113116 Ga0075435_1001131162 98
74 3300009094 Ga0111539_10277988 Ga0111539_102779882 98
75 3300009094 Ga0111539_11872788 Ga0111539_118727881 98
76 3300009553 Ga0105249_10298620 Ga0105249_102986203 98
77 3300013297 Ga0157378_10629942 Ga0157378_106299422 98
78 3300013308 Ga0157375_10408064 Ga0157375_104080641 98
79 3300014326 Ga0157380_10937537 Ga0157380_109375372 98
80 3300014968 Ga0157379_10000300 Ga0157379_1000030018 98
81 3300014969 Ga0157376_10039428 Ga0157376_100394283 98
82 3300025905 Ga0207685_10046849 Ga0207685_100468493 98
83 3300025910 Ga0207684_11244440 Ga0207684_112444402 98
84 3300025915 Ga0207693_11000729 Ga0207693_110007292 98
85 3300025922 Ga0207646_10144044 Ga0207646_101440441 98
86 3300025923 Ga0207681_10286765 Ga0207681_102867651 98
87 3300025923 Ga0207681_10759738 Ga0207681_107597382 98
88 3300025925 Ga0207650_10434167 Ga0207650_104341672 98
89 3300025925 Ga0207650_10996682 Ga0207650_109966821 98
90 3300025926 Ga0207659_10099719 Ga0207659_100997194 98
91 3300025936 Ga0207670_11034742 Ga0207670_110347422 98
92 3300025937 Ga0207669_10842195 Ga0207669_108421952 98
93 3300025939 Ga0207665_10051285 Ga0207665_100512853 98
94 3300025940 Ga0207691_10713752 Ga0207691_107137523 98
95 3300025945 Ga0207679_10466820 Ga0207679_104668202 98
96 3300025945 Ga0207679_11176740 Ga0207679_111767401 98
97 3300025961 Ga0207712_12038376 Ga0207712_120383762 98
98 3300025972 Ga0207668_10309850 Ga0207668_103098502 98
99 3300025972 Ga0207668_10370126 Ga0207668_103701262 98
100 3300025972 Ga0207668_10751528 Ga0207668_107515282 98
101 3300025986 Ga0207658_10297684 Ga0207658_102976841 98
102 3300026023 Ga0207677_10312391 Ga0207677_103123913 98
103 3300026035 Ga0207703_11023779 Ga0207703_110237792 98
104 3300026075 Ga0207708_10667465 Ga0207708_106674652 98
105 3300027907 Ga0207428_10937508 Ga0207428_109375081 98
106 3300028379 Ga0268266_10187786 Ga0268266_101877862 98
107 3300028379 Ga0268266_10557146 Ga0268266_105571462 98
108 3300028380 Ga0268265_10240258 Ga0268265_102402582 98
109 3300028381 Ga0268264_10308195 Ga0268264_103081953 98
110 3300031235 Ga0265330_10094316 Ga0265330_100943162 98
111 3300031247 Ga0265340_10468102 Ga0265340_104681022 98
112 3300031249 Ga0265339_10000943 Ga0265339_1000094318 98
113 3300031250 Ga0265331_10108596 Ga0265331_101085962 98
114 3300031711 Ga0265314_10002753 Ga0265314_100027535 98
115 3300031712 Ga0265342_10014759 Ga0265342_100147594 98
116 3300032002 Ga0307416_102581548 Ga0307416_1025815481 98
117 3300035086 Ga0373934_0065106 Ga0373934_0065106_612_941 98
118 3300035111 Ga0373923_0085779 Ga0373923_0085779_259_588 98
119 3300035117 Ga0373953_0015527 Ga0373953_0015527_583_912 98
120 3300035119 Ga0373956_0064227 Ga0373956_0064227_1161_1490 98
121 3300035172 Ga0373955_0233208 Ga0373955_0233208_165_494 98
122 3300035410 Ga0373924_0130837 Ga0373924_0130837_603_932 98
123 3300035691 Ga0373931_0850718 Ga0373931_0850718_81_404 98
124 3300035724 Ga0373933_0008043 Ga0373933_0008043_4814_5143 98
125 3300036401 Ga0373937_0023191 Ga0373937_0023191_1769_2098 98
126 3300037068 Ga0373925_0743065 Ga0373925_0743065_41_370 98
127 3300044673 Ga0453683_0644216 Ga0453683_0644216_76_387 98
128 3300046683 Ga0495658_0127653 Ga0495658_0127653_70_399 98
129 3300046683 Ga0495658_0184113 Ga0495658_0184113_39_368 98
130 3300048911 Ga0496108_0816240 Ga0496108_0816240_34_360 98
131 3300049576 Ga0501040_0613858 Ga0501040_0613858_70_396 98
132 3300049589 Ga0501073_0486531 Ga0501073_0486531_308_637 98
133 3300050507 nmdc:mga05p37_1078136_c1 nmdc:mga05p37_1078136_c1_13_348 98
134 3300050508 nmdc:mga09592_946150_c1 nmdc:mga09592_946150_c1_101_436 98
135 3300050511 nmdc:mga08y16_26800_c1 nmdc:mga08y16_26800_c1_4423_4752 98
136 3300050512 nmdc:mga0n895_138689_c1 nmdc:mga0n895_138689_c1_567_893 98
137 3300050512 nmdc:mga0n895_892433_c1 nmdc:mga0n895_892433_c1_151_477 98
138 3300050514 nmdc:mga08x19_163007_c1 nmdc:mga08x19_163007_c1_130_456 98
139 3300050514 nmdc:mga08x19_620143_c1 nmdc:mga08x19_620143_c1_376_702 98
140 3300050515 nmdc:mga0a205_204052_c1 nmdc:mga0a205_204052_c1_1103_1429 98
141 3300060353 Ga0501082_0337692 Ga0501082_0337692_370_699 98
142 3300005536 Ga0070697_100134433 Ga0070697_1001344332 99
143 3300005536 Ga0070697_101139324 Ga0070697_1011393242 99
144 3300005546 Ga0070696_100201919 Ga0070696_1002019192 99
145 3300005548 Ga0070665_100184672 Ga0070665_1001846722 99
146 3300005549 Ga0070704_101451827 Ga0070704_1014518271 99
147 3300005617 Ga0068859_101869384 Ga0068859_1018693842 99
148 3300005842 Ga0068858_100054778 Ga0068858_1000547784 99
149 3300005843 Ga0068860_101357107 Ga0068860_1013571071 99
150 3300005844 Ga0068862_100243157 Ga0068862_1002431572 99
151 3300005844 Ga0068862_100612140 Ga0068862_1006121402 99
152 3300006931 Ga0097620_101869379 Ga0097620_1018693791 99
153 3300009101 Ga0105247_11283744 Ga0105247_112837441 99
154 3300009177 Ga0105248_10990453 Ga0105248_109904532 99
155 3300009177 Ga0105248_11087113 Ga0105248_110871132 99
156 3300009553 Ga0105249_10873775 Ga0105249_108737752 99
157 3300013297 Ga0157378_11117115 Ga0157378_111171152 99
158 3300013306 Ga0163162_10117669 Ga0163162_101176694 99
159 3300014326 Ga0157380_11384049 Ga0157380_113840491 99
160 3300014968 Ga0157379_10249054 Ga0157379_102490542 99
161 3300014968 Ga0157379_11812232 Ga0157379_118122321 99
162 3300014969 Ga0157376_11359907 Ga0157376_113599072 99
163 3300025961 Ga0207712_10234009 Ga0207712_102340092 99
164 3300026035 Ga0207703_10211934 Ga0207703_102119342 99
165 3300026088 Ga0207641_10495494 Ga0207641_104954942 99
166 3300028380 Ga0268265_10482794 Ga0268265_104827942 99
167 3300028381 Ga0268264_10571281 Ga0268264_105712812 99
168 3300028577 Ga0265318_10020023 Ga0265318_100200233 99
169 3300031241 Ga0265325_10082188 Ga0265325_100821882 99
170 3300031242 Ga0265329_10004943 Ga0265329_100049435 99
171 3300031249 Ga0265339_10038043 Ga0265339_100380431 99
172 3300031344 Ga0265316_10784676 Ga0265316_107846761 99
173 3300032126 Ga0307415_101770688 Ga0307415_1017706881 99
174 3300035089 Ga0373944_0260830 Ga0373944_0260830_231_596 99
175 3300035112 Ga0373932_0082078 Ga0373932_0082078_487_828 99
176 3300035170 Ga0373943_0088755 Ga0373943_0088755_169_534 99
177 3300035692 Ga0373935_0032659 Ga0373935_0032659_1287_1652 99
178 3300035695 Ga0373927_0120232 Ga0373927_0120232_1077_1442 99
179 3300035725 Ga0373947_0036143 Ga0373947_0036143_2020_2385 99
180 3300037068 Ga0373925_0009169 Ga0373925_0009169_2862_3227 99
181 3300042876 Ga0451577_0043268 Ga0451577_0043268_880_1215 99
182 3300044673 Ga0453683_0000675 Ga0453683_0000675_10750_11085 99
183 3300045051 Ga0451576_0000453 Ga0451576_0000453_20071_20406 99
184 3300046472 Ga0495580_0025384 Ga0495580_0025384_398_763 99
185 3300046472 Ga0495580_0197791 Ga0495580_0197791_147_488 99
186 3300004801 Ga0058860_11797478 Ga0058860_117974782 100
187 3300005718 Ga0068866_10245186 Ga0068866_102451861 100
188 3300005841 Ga0068863_100509797 Ga0068863_1005097971 100
189 3300005844 Ga0068862_100262571 Ga0068862_1002625712 100
190 3300025899 Ga0207642_10238842 Ga0207642_102388423 100
191 3300025940 Ga0207691_10919786 Ga0207691_109197862 100
192 3300026088 Ga0207641_11399972 Ga0207641_113999721 100
193 3300028380 Ga0268265_11371794 Ga0268265_113717942 100

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01844

HNH

HNH endonuclease

61

109

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
3zpl-assembly2.cif.gz_E crystal structure of sco3205, a marr family transcriptional regulator from streptomyces coelicolor, in complex with dna 0.7743 5 45
2a20-assembly1.cif.gz_A solution structure of rim2 zinc finger domain 0.7246 47 88
7rwm-assembly2.cif.gz_C structure of cap5 from lactococcus lactis 0.6812 34 90
2cjs-assembly1.cif.gz_C structural basis for a munc13-1 homodimer - munc13-1 - rim heterodimer switch: c2-domains as versatile protein-protein interaction modules 0.6728 47 88
2qnf-assembly1.cif.gz_B crystal structure of t4 endonuclease vii h43n mutant in complex with heteroduplex dna containing base mismatches 0.6441 33 98
ID Description Score Start End Superfamily
af_Q59DP4_75_148_2.10.110.10 Mainly Beta;Ribbon;Cysteine Rich Protein;Cysteine Rich Protein 0.8162 47 90 2.10.110.10
af_A0A0R0C5S4_17_118_3.30.300.20 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;K homology (KH) domain 0.7722 13 47 3.30.300.20
af_Q54F86_359_438_3.30.40.10 Alpha Beta;2-Layer Sandwich;Herpes Virus-1;Zinc/RING finger domain, C3HC4 (zinc finger) 0.756 47 93 3.30.40.10
af_B6T925_104_174_2.10.110.10 Mainly Beta;Ribbon;Cysteine Rich Protein;Cysteine Rich Protein 0.7298 47 92 2.10.110.10
1e7lA01 Alpha Beta;3-Layer(aba) Sandwich;His-Me finger endonuclease fold;His-Me finger endonucleases 0.6975 33 92 3.40.1800.10
ID Description Score Start End GO Terms
AF-A0A7Y0L8Q6-F1-model_v4 HNH endonuclease 0.8731 35 87
AF-A0A4Q7EE61-F1-model_v4 HNH endonuclease 0.8291 36 88 GO:0004519
AF-A0A2T1DJE7-F1-model_v4 HNH endonuclease 0.824 31 88 GO:0003676
GO:0004519
GO:0008270
AF-A0A7V6LGW3-F1-model_v4 HNH endonuclease 0.8225 36 90 GO:0003676
GO:0004519
GO:0008270
AF-A0A0B7GSP6-F1-model_v4 HNH endonuclease 0.8213 35 90 GO:0003676
GO:0004519
GO:0008270

Feature Viewer

pLDDT pTM Quality
73.46 0.53 Medium
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Predicted Structure (AlphaFold2)

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