F296193

General Info

Members Datasets Scaffolds Average Seq Length
192 112 384 426

Family's Representative Sequence

Representative Sequence 3300048904|Ga0496101_0063961|Ga0496101_0063961_786_2210
Length 474
Sequence VSRIPIRLRLALVFAGGAAVLLTAVAGFGYLRLSDGLSQDLDRELRQRAQDLIVPVSRPGTSLEDLAGTGFIERGESFAEVVSPSGRLVQSTSTLHRRPLLSPAEASRAAAGTITLDRRSAPGLNEPARLLATPFTRNGQRLVLVVGDTRENGLETLRRVRAQLLVGLPLLVLLTFLGAYAVAGAALRPVEAMRRRAAELTAGDPALRLPIPPAADEIARLGLTLNELLARVEQTLERERAFVAHASHELRTPLALLRTQLELAVRRPRPASELVDAIRSAEVEVDRLQRLAEDLLLLAQATDGQLTVHLEDVTVTELFADVRSRFAAAVSETGWTLEVSGREGVVRVDRSQLHQALTNLVGNALEHGSPVVRLDARSQGDRMELVVADEGEGFPPEMLEHGMERFVRGRRSTGAGLGLAIVAAIAAANGGEAGLRNVAGGAEAWIAVPVSAARPAAPGPTSRPAPLLAPPPRP

Samples

Sample ID Description Type Environment
1 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
4 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
5 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
6 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
7 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
8 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
9 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
10 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
11 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
12 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
13 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
14 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
15 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
16 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
17 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
18 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
19 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
20 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
21 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
22 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
23 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
24 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
25 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
26 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
27 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
28 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
29 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
30 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
31 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
32 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
33 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
34 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
35 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
36 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
53 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
54 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
55 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
56 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
57 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
58 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
59 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
60 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
61 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
62 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
63 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
64 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
65 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
66 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
67 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
68 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
69 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
70 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
71 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
72 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
73 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
74 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
75 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
76 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
77 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
78 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
79 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
80 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
81 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
82 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
83 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
84 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
85 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
86 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
87 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
88 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
89 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
90 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
91 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
93 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
94 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
95 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
96 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
97 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
98 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
99 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
100 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
101 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
102 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
103 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
104 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
105 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
107 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
108 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
109 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
110 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
111 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
112 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 9.9
Rhizosphere 89.06
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496101_0063961 3300048904 Bacteria 2679
2 Ga0070683_100018096 3300005329 Bacteria 6235
3 Ga0070683_100028570 3300005329 Bacteria 5041
4 Ga0070711_100058544 3300005439 Bacteria 2672
5 Ga0070685_10070757 3300005466 Bacteria 2066
6 Ga0070698_100140175 3300005471 Bacteria 2370
7 Ga0070684_100029485 3300005535 Bacteria 4651
8 Ga0070684_100033240 3300005535 Bacteria 4402
9 Ga0070684_100089380 3300005535 Bacteria 2737
10 Ga0070672_100175057 3300005543 Bacteria 1786
11 Ga0070693_100086745 3300005547 Bacteria 1878
12 Ga0070693_100143808 3300005547 Bacteria 1504
13 Ga0070665_100055843 3300005548 Bacteria 3960
14 Ga0070665_100056268 3300005548 Bacteria 3944
15 Ga0068855_100058745 3300005563 Bacteria 4502
16 Ga0068857_100001796 3300005577 Bacteria 17261
17 Ga0068857_100052161 3300005577 Bacteria 3629
18 Ga0068856_100010096 3300005614 Bacteria 9175
19 Ga0068852_100305491 3300005616 Bacteria 1541
20 Ga0068858_100024744 3300005842 Bacteria 5591
21 Ga0081455_10064866 3300005937 Bacteria 3057
22 Ga0081538_10000068 3300005981 Bacteria 97659
23 Ga0081540_1013254 3300005983 Bacteria 5371
24 Ga0081539_10003742 3300005985 Bacteria 18097
25 Ga0075428_100168820 3300006844 Bacteria 2373
26 Ga0075431_100056994 3300006847 Bacteria 4030
27 Ga0075429_100026908 3300006880 Bacteria 4994
28 Ga0111539_10011388 3300009094 Bacteria 11166
29 Ga0111539_10031197 3300009094 Bacteria 6477
30 Ga0111539_10103120 3300009094 Bacteria 3348
31 Ga0111539_10142294 3300009094 Bacteria 2808
32 Ga0105245_10022644 3300009098 Bacteria 5516
33 Ga0114129_10564267 3300009147 Bacteria 1479
34 Ga0105243_10011059 3300009148 Bacteria 6827
35 Ga0105243_10089409 3300009148 Bacteria 2532
36 Ga0105242_10044169 3300009176 Bacteria 3607
37 Ga0105248_10314772 3300009177 Bacteria 1763
38 Ga0105239_10019690 3300010375 Bacteria 7448
39 Ga0105246_10003320 3300011119 Bacteria 9741
40 Ga0105246_10120455 3300011119 Bacteria 1944
41 Ga0157369_10021321 3300013105 Bacteria 7247
42 Ga0163162_10039500 3300013306 Bacteria 4716
43 Ga0157372_10004208 3300013307 Bacteria 15404
44 Ga0157372_10191059 3300013307 Bacteria 2372
45 Ga0157375_10031945 3300013308 Bacteria 4987
46 Ga0157375_10142294 3300013308 Bacteria 2527
47 Ga0163163_10009591 3300014325 Bacteria 8651
48 Ga0157379_10005246 3300014968 Bacteria 11129
49 Ga0207643_10054584 3300025908 Bacteria 2271
50 Ga0207657_10103532 3300025919 Bacteria 2359
51 Ga0207687_10024145 3300025927 Bacteria 4059
52 Ga0207687_10211250 3300025927 Bacteria 1523
53 Ga0207706_10041358 3300025933 Bacteria 4086
54 Ga0207709_10049696 3300025935 Bacteria 2561
55 Ga0207691_10166607 3300025940 Bacteria 1930
56 Ga0207689_10032914 3300025942 Bacteria 4309
57 Ga0207661_10035342 3300025944 Bacteria 3893
58 Ga0207661_10110039 3300025944 Bacteria 2328
59 Ga0207679_10091826 3300025945 Bacteria 2350
60 Ga0207703_10029161 3300026035 Bacteria 4354
61 Ga0207702_10051803 3300026078 Bacteria 3471
62 Ga0207674_10000833 3300026116 Bacteria 40230
63 Ga0207674_10006958 3300026116 Bacteria 13240
64 Ga0207698_10094283 3300026142 Bacteria 2461
65 Ga0207698_10146874 3300026142 Bacteria 2040
66 Ga0268266_10026722 3300028379 Bacteria 4912
67 Ga0268266_10037101 3300028379 Bacteria 4152
68 Ga0268265_10003937 3300028380 Bacteria 10464
69 Ga0268264_10248546 3300028381 Bacteria 1651
70 Ga0373927_0025521 3300035695 Bacteria 3865
71 Ga0373947_0004062 3300035725 Bacteria 8609
72 Ga0395899_0014866 3300037312 Bacteria 5941
73 Ga0395899_0021457 3300037312 Bacteria 4900
74 Ga0395899_0026729 3300037312 Bacteria 4354
75 Ga0395900_0005435 3300037418 Bacteria 13348
76 Ga0395898_0004275 3300037466 Bacteria 15666
77 Ga0395898_0004415 3300037466 Bacteria 15390
78 Ga0395898_0007543 3300037466 Bacteria 11553
79 Ga0395898_0010614 3300037466 Bacteria 9619
80 Ga0395898_0014649 3300037466 Bacteria 8053
81 Ga0395898_0040519 3300037466 Bacteria 4606
82 Ga0395898_0052775 3300037466 Bacteria 3972
83 Ga0395898_0057573 3300037466 Bacteria 3787
84 Ga0395898_0121167 3300037466 Bacteria 2506
85 Ga0395905_0073045 3300037471 Bacteria 3215
86 Ga0395905_0076598 3300037471 Bacteria 3134
87 Ga0395905_0088563 3300037471 Bacteria 2901
88 Ga0395901_0000748 3300038443 Bacteria 36691
89 Ga0395901_0003449 3300038443 Bacteria 15941
90 Ga0395901_0026595 3300038443 Bacteria 5941
91 Ga0395901_0071629 3300038443 Bacteria 3612
92 Ga0395901_0079278 3300038443 Bacteria 3429
93 Ga0395901_0079530 3300038443 Bacteria 3423
94 Ga0395901_0104487 3300038443 Bacteria 2973
95 Ga0395901_0108288 3300038443 Bacteria 2917
96 Ga0395901_0120159 3300038443 Bacteria 2761
97 Ga0436365_1624266 3300039437 Bacteria 2754
98 Ga0436362_0446789 3300039453 Bacteria 1514
99 Ga0451853_2687334 3300041512 Bacteria 6330
100 Ga0439448_0021964 3300042005 Bacteria 1980
101 Ga0466967_0026559 3300045976 Bacteria 4798
102 Ga0466967_0040673 3300045976 Bacteria 4004
103 Ga0466967_0151492 3300045976 Bacteria 2168
104 Ga0466967_0242430 3300045976 Bacteria 1720
105 Ga0495603_0016626 3300046455 Bacteria 4452
106 Ga0495603_0053925 3300046455 Bacteria 2385
107 Ga0495641_0025567 3300046461 Bacteria 2897
108 Ga0495582_0033692 3300046473 Bacteria 2816
109 Ga0495584_0002712 3300046491 Bacteria 9935
110 Ga0495584_0055203 3300046491 Bacteria 1999
111 Ga0495630_0005203 3300046517 Bacteria 9167
112 Ga0495642_0036928 3300046528 Bacteria 1976
113 Ga0495586_0011871 3300046535 Bacteria 4629
114 Ga0495656_0003488 3300046615 Bacteria 5319
115 Ga0495581_0002311 3300047315 Bacteria 10741
116 Ga0495676_0058950 3300047321 Bacteria 3018
117 Ga0496102_0007404 3300048905 Bacteria 9378
118 Ga0496102_0096404 3300048905 Bacteria 2742
119 Ga0496105_0009258 3300048908 Bacteria 7695
120 Ga0496106_0048161 3300048909 Bacteria 3209
121 Ga0496108_0014336 3300048911 Bacteria 6471
122 Ga0496108_0172385 3300048911 Bacteria 1872
123 Ga0496108_0239521 3300048911 Bacteria 1578
124 Ga0496109_0013978 3300048912 Bacteria 6980
125 Ga0496109_0018343 3300048912 Bacteria 6147
126 Ga0496109_0077613 3300048912 Bacteria 3057
127 Ga0496109_0083826 3300048912 Bacteria 2940
128 Ga0496109_0101563 3300048912 Bacteria 2669
129 Ga0496109_0109544 3300048912 Bacteria 2567
130 Ga0496110_0002288 3300048913 Bacteria 14312
131 Ga0496113_0080307 3300048916 Bacteria 2498
132 Ga0496114_0011382 3300048917 Bacteria 7107
133 Ga0496114_0110944 3300048917 Bacteria 2350
134 Ga0496115_0008972 3300048918 Bacteria 7412
135 Ga0501031_0040905 3300049568 Bacteria 3026
136 Ga0501031_0064464 3300049568 Bacteria 2386
137 Ga0501032_0045180 3300049569 Bacteria 2980
138 Ga0501036_0019257 3300049572 Bacteria 5727
139 Ga0501036_0078910 3300049572 Bacteria 2785
140 Ga0501038_0033531 3300049574 Bacteria 4523
141 Ga0501039_0020601 3300049575 Bacteria 5054
142 Ga0501039_0041045 3300049575 Bacteria 3572
143 Ga0501039_0057049 3300049575 Bacteria 3025
144 Ga0501039_0209199 3300049575 Bacteria 1534
145 Ga0501040_0077265 3300049576 Bacteria 2303
146 Ga0501040_0093491 3300049576 Bacteria 2091
147 Ga0501040_0187423 3300049576 Bacteria 1467
148 Ga0501041_0007303 3300049577 Bacteria 6485
149 Ga0501041_0036397 3300049577 Bacteria 2982
150 Ga0501041_0123579 3300049577 Bacteria 1610
151 Ga0501042_0026804 3300049578 Bacteria 4049
152 Ga0501042_0038123 3300049578 Bacteria 3413
153 Ga0501042_0097969 3300049578 Bacteria 2108
154 Ga0501042_0102043 3300049578 Bacteria 2063
155 Ga0501046_0091553 3300049580 Bacteria 2339
156 Ga0501048_0041675 3300049582 Bacteria 3288
157 Ga0501048_0056042 3300049582 Bacteria 2797
158 Ga0501048_0141126 3300049582 Bacteria 1703
159 Ga0501067_0011098 3300049583 Bacteria 4984
160 Ga0501068_0007634 3300049584 Bacteria 5983
161 Ga0501068_0049731 3300049584 Bacteria 2533
162 Ga0501070_0095890 3300049586 Bacteria 2454
163 Ga0501071_0066253 3300049587 Bacteria 2624
164 Ga0501072_0009333 3300049588 Bacteria 7456
165 Ga0501072_0023500 3300049588 Bacteria 4789
166 Ga0501072_0058167 3300049588 Bacteria 3047
167 Ga0501072_0060100 3300049588 Bacteria 2997
168 Ga0501073_0075080 3300049589 Bacteria 2353
169 Ga0501075_0015325 3300049591 Bacteria 5499
170 Ga0501075_0123223 3300049591 Bacteria 1973
171 Ga0501076_0006708 3300049592 Bacteria 8351
172 Ga0501076_0029116 3300049592 Bacteria 4293
173 Ga0501076_0114509 3300049592 Bacteria 2182
174 Ga0501077_0077705 3300049593 Bacteria 2103
175 Ga0501079_0038849 3300049741 Bacteria 3671
176 Ga0501079_0202541 3300049741 Bacteria 1550
177 Ga0501080_0053939 3300049742 Bacteria 3744
178 Ga0501081_0053903 3300049743 Bacteria 2777
179 Ga0501081_0056669 3300049743 Bacteria 2709
180 Ga0501035_0042584 3300049822 Bacteria 4095
181 Ga0501045_0008904 3300049824 Bacteria 7007
182 nmdc:mga09592_53369_c1 3300050508 Bacteria 3413
183 nmdc:mga06r32_28118_c1 3300050510 Bacteria 5258
184 nmdc:mga06r32_296484_c1 3300050510 Bacteria 1603
185 nmdc:mga08y16_155465_c1 3300050511 Bacteria 2377
186 nmdc:mga08y16_178029_c1 3300050511 Bacteria 2208
187 Ga0501084_0031750 3300054114 Bacteria 4416
188 Ga0501084_0033739 3300054114 Bacteria 4281
189 Ga0501084_0040333 3300054114 Bacteria 3905
190 Ga0501082_0024740 3300060353 Bacteria 5176
191 Ga0530510_0014377 3300061734 Bacteria 5581
192 Ga0530510_0034474 3300061734 Bacteria 3646
193 Ga0496101_0063961
194 Ga0070683_100018096
195 Ga0070683_100028570
196 Ga0070711_100058544
197 Ga0070685_10070757
198 Ga0070698_100140175
199 Ga0070684_100029485
200 Ga0070684_100033240
201 Ga0070684_100089380
202 Ga0070672_100175057
203 Ga0070693_100086745
204 Ga0070693_100143808
205 Ga0070665_100055843
206 Ga0070665_100056268
207 Ga0068855_100058745
208 Ga0068857_100001796
209 Ga0068857_100052161
210 Ga0068856_100010096
211 Ga0068852_100305491
212 Ga0068858_100024744
213 Ga0081455_10064866
214 Ga0081538_10000068
215 Ga0081540_1013254
216 Ga0081539_10003742
217 Ga0075428_100168820
218 Ga0075431_100056994
219 Ga0075429_100026908
220 Ga0111539_10011388
221 Ga0111539_10031197
222 Ga0111539_10103120
223 Ga0111539_10142294
224 Ga0105245_10022644
225 Ga0114129_10564267
226 Ga0105243_10011059
227 Ga0105243_10089409
228 Ga0105242_10044169
229 Ga0105248_10314772
230 Ga0105239_10019690
231 Ga0105246_10003320
232 Ga0105246_10120455
233 Ga0157369_10021321
234 Ga0163162_10039500
235 Ga0157372_10004208
236 Ga0157372_10191059
237 Ga0157375_10031945
238 Ga0157375_10142294
239 Ga0163163_10009591
240 Ga0157379_10005246
241 Ga0207643_10054584
242 Ga0207657_10103532
243 Ga0207687_10024145
244 Ga0207687_10211250
245 Ga0207706_10041358
246 Ga0207709_10049696
247 Ga0207691_10166607
248 Ga0207689_10032914
249 Ga0207661_10035342
250 Ga0207661_10110039
251 Ga0207679_10091826
252 Ga0207703_10029161
253 Ga0207702_10051803
254 Ga0207674_10000833
255 Ga0207674_10006958
256 Ga0207698_10094283
257 Ga0207698_10146874
258 Ga0268266_10026722
259 Ga0268266_10037101
260 Ga0268265_10003937
261 Ga0268264_10248546
262 Ga0373927_0025521
263 Ga0373947_0004062
264 Ga0395899_0014866
265 Ga0395899_0021457
266 Ga0395899_0026729
267 Ga0395900_0005435
268 Ga0395898_0004275
269 Ga0395898_0004415
270 Ga0395898_0007543
271 Ga0395898_0010614
272 Ga0395898_0014649
273 Ga0395898_0040519
274 Ga0395898_0052775
275 Ga0395898_0057573
276 Ga0395898_0121167
277 Ga0395905_0073045
278 Ga0395905_0076598
279 Ga0395905_0088563
280 Ga0395901_0000748
281 Ga0395901_0003449
282 Ga0395901_0026595
283 Ga0395901_0071629
284 Ga0395901_0079278
285 Ga0395901_0079530
286 Ga0395901_0104487
287 Ga0395901_0108288
288 Ga0395901_0120159
289 Ga0436365_1624266
290 Ga0436362_0446789
291 Ga0451853_2687334
292 Ga0439448_0021964
293 Ga0466967_0026559
294 Ga0466967_0040673
295 Ga0466967_0151492
296 Ga0466967_0242430
297 Ga0495603_0016626
298 Ga0495603_0053925
299 Ga0495641_0025567
300 Ga0495582_0033692
301 Ga0495584_0002712
302 Ga0495584_0055203
303 Ga0495630_0005203
304 Ga0495642_0036928
305 Ga0495586_0011871
306 Ga0495656_0003488
307 Ga0495581_0002311
308 Ga0495676_0058950
309 Ga0496102_0007404
310 Ga0496102_0096404
311 Ga0496105_0009258
312 Ga0496106_0048161
313 Ga0496108_0014336
314 Ga0496108_0172385
315 Ga0496108_0239521
316 Ga0496109_0013978
317 Ga0496109_0018343
318 Ga0496109_0077613
319 Ga0496109_0083826
320 Ga0496109_0101563
321 Ga0496109_0109544
322 Ga0496110_0002288
323 Ga0496113_0080307
324 Ga0496114_0011382
325 Ga0496114_0110944
326 Ga0496115_0008972
327 Ga0501031_0040905
328 Ga0501031_0064464
329 Ga0501032_0045180
330 Ga0501036_0019257
331 Ga0501036_0078910
332 Ga0501038_0033531
333 Ga0501039_0020601
334 Ga0501039_0041045
335 Ga0501039_0057049
336 Ga0501039_0209199
337 Ga0501040_0077265
338 Ga0501040_0093491
339 Ga0501040_0187423
340 Ga0501041_0007303
341 Ga0501041_0036397
342 Ga0501041_0123579
343 Ga0501042_0026804
344 Ga0501042_0038123
345 Ga0501042_0097969
346 Ga0501042_0102043
347 Ga0501046_0091553
348 Ga0501048_0041675
349 Ga0501048_0056042
350 Ga0501048_0141126
351 Ga0501067_0011098
352 Ga0501068_0007634
353 Ga0501068_0049731
354 Ga0501070_0095890
355 Ga0501071_0066253
356 Ga0501072_0009333
357 Ga0501072_0023500
358 Ga0501072_0058167
359 Ga0501072_0060100
360 Ga0501073_0075080
361 Ga0501075_0015325
362 Ga0501075_0123223
363 Ga0501076_0006708
364 Ga0501076_0029116
365 Ga0501076_0114509
366 Ga0501077_0077705
367 Ga0501079_0038849
368 Ga0501079_0202541
369 Ga0501080_0053939
370 Ga0501081_0053903
371 Ga0501081_0056669
372 Ga0501035_0042584
373 Ga0501045_0008904
374 nmdc:mga09592_53369_c1
375 nmdc:mga06r32_28118_c1
376 nmdc:mga06r32_296484_c1
377 nmdc:mga08y16_155465_c1
378 nmdc:mga08y16_178029_c1
379 Ga0501084_0031750
380 Ga0501084_0033739
381 Ga0501084_0040333
382 Ga0501082_0024740
383 Ga0530510_0014377
384 Ga0530510_0034474

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00672

HAMP

HAMP domain

181

234

0.95

PF00512

HisKA

His Kinase A (phospho-acceptor) domain

238

304

0.92

PF02518

HATPase_c

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase

348

452

0.86

PF13581

HATPase_c_2

Histidine kinase-like ATPase domain

317

429

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
1ysr-assembly1.cif.gz_C crystal structure of atp binding domain of prrb from mycobacterium tuberculosis 0.8976 286 427
1ysr-assembly1.cif.gz_A crystal structure of atp binding domain of prrb from mycobacterium tuberculosis 0.8888 285 427
4q20-assembly1.cif.gz_B crystal structure of a c-terminal part of tyrosine kinase (divl) from caulobacter crescentus cb15 at 2.50 a resolution (psi community target, shapiro) 0.8735 201 425
1ysr-assembly1.cif.gz_C crystal structure of atp binding domain of prrb from mycobacterium tuberculosis 0.8726 286 427
1ysr-assembly1.cif.gz_A crystal structure of atp binding domain of prrb from mycobacterium tuberculosis 0.8704 285 427
ID Description Score Start End Superfamily
af_O07778_1_142_3.30.565.10 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.9014 289 427 3.30.565.10
af_P0AEJ4_294_450_3.30.565.10 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.8998 286 427 3.30.565.10
1ysrC00 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.8976 286 427 3.30.565.10
af_Q2FY80_429_583_3.30.565.10 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.8886 283 427 3.30.565.10
af_P9WGK5_228_381_3.30.565.10 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.8837 285 425 3.30.565.10
ID Description Score Start End GO Terms
AF-A0A7V3DFD3-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.8869 270 427 GO:0016301
AF-A0A7X2PQS1-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.8859 280 427 GO:0016301
AF-A0A2U3QIM1-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.8838 265 427 GO:0000155
AF-A0A525JDZ2-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.8833 285 427 GO:0000155
GO:0005524
GO:0005886
AF-W1F7K9-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.8762 287 427 GO:0000155
GO:0016020

Map