F295576

General Info

Members Datasets Scaffolds Average Seq Length
192 132 384 745

Family's Representative Sequence

Representative Sequence 3300009147|Ga0114129_10210496|Ga0114129_102104961
Length 770
Sequence MAWWSDIITFYAMSEFDAAIPRVTEFLERVTDLNRRYRAGQMHVYVPEALQNRDHPLEEVIAEHLPASNAALQAASRSLFFSLPVAFNPAESIGPYLAVIDRDAAGEPYRFLDMGALIATHAFGENDPAVVRAILEWLPFATARYAHSEYQTVLSLRLKAELNRIAPAGTPRHFIVNTGAEAVENAIKSVLLNRVKTSEDGAGAFIVSFEGAFHGRTLGSLAVTHRKKARLGFPTFDWPHIPFPVENTNAPKETARREERSLKQLWDLLVSGRLPRAEKSKDTYRSEMDALDDFLAQLPAQGFGEPRRSSPEQPASGGGPTPGAEAVTAFVAAQRANLSADVIRRSRRVAAVLVEPIQGEGGVRQASARFMRKLRLLTRIYDVPLVFDEVQTGWGMTGRLWAHELFDLPAPPDVVTWAKKAQNGVLFVSEELATFFQEEKKFNTTWEGDSVGMVRLLALLDKLDLDEVRRTGDRARAGLEALAKEYREILRNVRGAGVMLAFDVARPDLRDALLDRTFRRGLVLLAAGERSVRLYPRYDTEPSAIDEALSILRLAVEDLVGGKAAAEAPPAPKIRVGTLEIPLDTIETLDLTPAAFETHKQQIAMVEQERYGAGAPYPADVLRTGRRPLLQFPLETLEATMANPRAIGVALRDKVSGRLVGYALGSALENHDEEGVSSDPHYGENNTFYLQAMATLPTVQNEVEVENSLLETLWSRVVAAGFEYLSMLIEDRLRETGPAWLQSAAALERIDNYLRSGMAFTYLQVPLVSG

Samples

Sample ID Description Type Environment
1 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
2 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
16 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
17 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
18 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
21 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
22 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
23 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
24 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
25 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
26 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
31 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
32 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
33 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
35 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
36 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
37 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
38 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
39 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
40 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
41 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
45 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
46 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
47 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
48 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
49 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
50 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
51 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
52 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
76 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
77 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
78 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
79 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
80 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
81 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
82 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
83 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
84 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
85 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
86 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
87 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
88 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
89 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
90 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
91 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
92 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
93 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
94 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
95 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
96 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
97 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
98 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
99 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
100 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
101 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
102 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
103 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
104 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
105 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
106 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
107 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
108 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
109 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
112 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
115 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
116 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
117 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
118 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
119 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
120 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
121 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
122 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
123 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
124 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
125 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
126 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
127 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
128 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
129 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
130 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
131 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
132 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.52
Nodule 0
Rhizoplane 5.73
Rhizosphere 93.75
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0114129_10210496 3300009147 Bacteria 2629
2 Ga0065715_10096568 3300005293 Bacteria 3858
3 Ga0070683_100000600 3300005329 Bacteria 25803
4 Ga0070670_100016794 3300005331 Bacteria 6281
5 Ga0070666_10019632 3300005335 Bacteria 4367
6 Ga0070680_100049252 3300005336 Bacteria 3434
7 Ga0070660_100027539 3300005339 Bacteria 4243
8 Ga0070671_100014790 3300005355 Bacteria 6305
9 Ga0070674_100000362 3300005356 Bacteria 22689
10 Ga0070688_100010052 3300005365 Bacteria 5201
11 Ga0070667_100019165 3300005367 Bacteria 5673
12 Ga0070713_100010843 3300005436 Bacteria 6605
13 Ga0070663_100028408 3300005455 Bacteria 3808
14 Ga0070681_10005230 3300005458 Bacteria 12534
15 Ga0070685_10002651 3300005466 Bacteria 9159
16 Ga0070707_100024851 3300005468 Bacteria 5678
17 Ga0070698_100008089 3300005471 Bacteria 11372
18 Ga0070698_100044156 3300005471 Bacteria 4566
19 Ga0070698_100046728 3300005471 Bacteria 4426
20 Ga0070699_100019549 3300005518 Bacteria 5835
21 Ga0070679_100037205 3300005530 Bacteria 4833
22 Ga0070684_100000070 3300005535 Bacteria 65257
23 Ga0070672_100013570 3300005543 Bacteria 5760
24 Ga0070686_100000401 3300005544 Bacteria 27147
25 Ga0070665_100004843 3300005548 Bacteria 13984
26 Ga0070665_100008329 3300005548 Bacteria 10485
27 Ga0070665_100047455 3300005548 Bacteria 4310
28 Ga0070704_100021246 3300005549 Bacteria 4205
29 Ga0070664_100000587 3300005564 Bacteria 27722
30 Ga0068854_100003857 3300005578 Bacteria 9396
31 Ga0068859_100119708 3300005617 Bacteria 2700
32 Ga0068864_100004468 3300005618 Bacteria 11493
33 Ga0068863_100008165 3300005841 Bacteria 10224
34 Ga0068858_100007999 3300005842 Bacteria 10189
35 Ga0068862_100005691 3300005844 Bacteria 10398
36 Ga0081455_10016526 3300005937 Bacteria 7121
37 Ga0097621_100003847 3300006237 Bacteria 10398
38 Ga0097621_100009814 3300006237 Bacteria 6969
39 Ga0068871_100045045 3300006358 Bacteria 3549
40 Ga0068871_100091346 3300006358 Bacteria 2537
41 Ga0075428_100017745 3300006844 Bacteria 7864
42 Ga0075428_100028824 3300006844 Bacteria 6143
43 Ga0075430_100006300 3300006846 Bacteria 10008
44 Ga0075433_10003176 3300006852 Bacteria 12659
45 Ga0075433_10023277 3300006852 Bacteria 5212
46 Ga0075433_10023684 3300006852 Bacteria 5171
47 Ga0075434_100000082 3300006871 Bacteria 51181
48 Ga0075434_100005581 3300006871 Bacteria 11464
49 Ga0075434_100062030 3300006871 Bacteria 3721
50 Ga0075434_100099739 3300006871 Bacteria 2910
51 Ga0068865_100005791 3300006881 Bacteria 7511
52 Ga0068865_100052354 3300006881 Bacteria 2829
53 Ga0075436_100000504 3300006914 Bacteria 25252
54 Ga0075436_100015021 3300006914 Bacteria 5307
55 Ga0075436_100028395 3300006914 Bacteria 3849
56 Ga0097620_100119713 3300006931 Bacteria 2700
57 Ga0075435_100000008 3300007076 Bacteria 115376
58 Ga0075435_100000184 3300007076 Bacteria 37257
59 Ga0075435_100004118 3300007076 Bacteria 9970
60 Ga0075435_100022375 3300007076 Bacteria 4877
61 Ga0075435_100043813 3300007076 Bacteria 3583
62 Ga0075435_100072326 3300007076 Bacteria 2817
63 Ga0111539_10073359 3300009094 Bacteria 4036
64 Ga0105245_10053608 3300009098 Bacteria 3620
65 Ga0114129_10000235 3300009147 Bacteria 61785
66 Ga0114129_10001454 3300009147 Bacteria 31988
67 Ga0114129_10004198 3300009147 Bacteria 20355
68 Ga0114129_10034351 3300009147 Bacteria 7161
69 Ga0114129_10052944 3300009147 Bacteria 5695
70 Ga0114129_10111980 3300009147 Bacteria 3764
71 Ga0114129_10132237 3300009147 Bacteria 3426
72 Ga0114129_10141605 3300009147 Bacteria 3296
73 Ga0105242_10004882 3300009176 Bacteria 10382
74 Ga0105242_10025276 3300009176 Bacteria 4698
75 Ga0105248_10009970 3300009177 Bacteria 10462
76 Ga0105248_10049765 3300009177 Bacteria 4699
77 Ga0105248_10077846 3300009177 Bacteria 3728
78 Ga0105248_10134848 3300009177 Bacteria 2785
79 Ga0157374_10012137 3300013296 Bacteria 7484
80 Ga0157378_10006436 3300013297 Bacteria 10273
81 Ga0163163_10004365 3300014325 Bacteria 12050
82 Ga0163163_10037497 3300014325 Bacteria 4716
83 Ga0163163_10089500 3300014325 Bacteria 3090
84 Ga0157379_10021441 3300014968 Bacteria 5720
85 Ga0157379_10022268 3300014968 Bacteria 5613
86 Ga0157379_10100829 3300014968 Bacteria 2592
87 Ga0157376_10019798 3300014969 Bacteria 5195
88 Ga0157376_10089625 3300014969 Bacteria 2660
89 Ga0207680_10005934 3300025903 Bacteria 5870
90 Ga0207707_10023386 3300025912 Bacteria 5406
91 Ga0207660_10040472 3300025917 Bacteria 3263
92 Ga0207657_10033798 3300025919 Bacteria 4605
93 Ga0207646_10022535 3300025922 Bacteria 5801
94 Ga0207650_10002415 3300025925 Bacteria 13009
95 Ga0207650_10067248 3300025925 Bacteria 2689
96 Ga0207659_10000106 3300025926 Bacteria 49900
97 Ga0207687_10056541 3300025927 Bacteria 2753
98 Ga0207644_10046710 3300025931 Bacteria 3086
99 Ga0207706_10047652 3300025933 Bacteria 3791
100 Ga0207670_10002923 3300025936 Bacteria 9034
101 Ga0207669_10005403 3300025937 Bacteria 5730
102 Ga0207711_10004025 3300025941 Bacteria 12615
103 Ga0207711_10046831 3300025941 Bacteria 3695
104 Ga0207711_10068181 3300025941 Bacteria 3080
105 Ga0207661_10007493 3300025944 Bacteria 7763
106 Ga0207679_10000681 3300025945 Bacteria 22748
107 Ga0207651_10009207 3300025960 Bacteria 5388
108 Ga0207651_10030072 3300025960 Bacteria 3453
109 Ga0207658_10012151 3300025986 Bacteria 5873
110 Ga0207703_10004941 3300026035 Bacteria 10824
111 Ga0207703_10021800 3300026035 Bacteria 5015
112 Ga0207678_10044211 3300026067 Bacteria 3854
113 Ga0207648_10025428 3300026089 Bacteria 5274
114 Ga0207648_10067324 3300026089 Bacteria 3122
115 Ga0207676_10015398 3300026095 Bacteria 5515
116 Ga0207675_100086823 3300026118 Bacteria 2938
117 Ga0268266_10008249 3300028379 Bacteria 9283
118 Ga0268266_10016360 3300028379 Bacteria 6341
119 Ga0373934_0021785 3300035086 Bacteria 2471
120 Ga0373949_0002130 3300035090 Bacteria 5203
121 Ga0373951_0006758 3300035091 Bacteria 2618
122 Ga0373952_0000969 3300035092 Bacteria 5217
123 Ga0373932_0002381 3300035112 Bacteria 4774
124 Ga0373939_0001415 3300035114 Bacteria 5825
125 Ga0373941_0001340 3300035115 Bacteria 5181
126 Ga0373953_0021813 3300035117 Bacteria 2408
127 Ga0373960_0002510 3300035121 Bacteria 4128
128 Ga0373955_0010569 3300035172 Bacteria 4364
129 Ga0373942_0002159 3300035207 Bacteria 4853
130 Ga0373961_0001267 3300035241 Bacteria 7690
131 Ga0373931_0012073 3300035691 Bacteria 4181
132 Ga0373947_0013261 3300035725 Bacteria 4721
133 Ga0373925_0044720 3300037068 Bacteria 3289
134 Ga0453684_0043457 3300044712 Bacteria 6038
135 Ga0451576_0015343 3300045051 Bacteria 8489
136 Ga0451576_0055068 3300045051 Bacteria 4162
137 Ga0495608_0002752 3300046511 Bacteria 12635
138 Ga0495645_0012667 3300046543 Bacteria 5947
139 Ga0495634_0052729 3300046642 Bacteria 2726
140 Ga0495669_0014156 3300046684 Bacteria 3410
141 Ga0495613_0032705 3300046689 Bacteria 3864
142 Ga0495604_0049198 3300047317 Bacteria 3277
143 Ga0495674_0009659 3300047319 Bacteria 9161
144 Ga0495680_0047924 3300047322 Bacteria 3358
145 Ga0495684_0001250 3300047471 Bacteria 20496
146 Ga0496101_0001070 3300048904 Bacteria 16208
147 Ga0496104_0003507 3300048907 Bacteria 13532
148 Ga0496104_0028134 3300048907 Bacteria 5209
149 Ga0496108_0008892 3300048911 Bacteria 8142
150 Ga0496109_0003150 3300048912 Bacteria 13759
151 Ga0496110_0000355 3300048913 Bacteria 30703
152 Ga0496112_0000346 3300048915 Bacteria 30207
153 Ga0496112_0004199 3300048915 Bacteria 12146
154 Ga0496113_0021652 3300048916 Bacteria 4537
155 Ga0496114_0000379 3300048917 Bacteria 32885
156 Ga0496114_0001800 3300048917 Bacteria 16268
157 Ga0501036_0008310 3300049572 Bacteria 8504
158 Ga0501039_0011673 3300049575 Bacteria 6691
159 Ga0501041_0002299 3300049577 Bacteria 10810
160 Ga0501042_0005232 3300049578 Bacteria 8336
161 Ga0501046_0008853 3300049580 Bacteria 8744
162 Ga0501075_0001242 3300049591 Bacteria 16539
163 Ga0501076_0000505 3300049592 Bacteria 24724
164 Ga0501077_0006008 3300049593 Bacteria 7415
165 Ga0501079_0006981 3300049741 Bacteria 8510
166 Ga0501081_0000062 3300049743 Bacteria 41574
167 Ga0501045_0000841 3300049824 Bacteria 19901
168 nmdc:mga05p37_101890_c1 3300050507 Bacteria 3536
169 nmdc:mga05p37_37508_c1 3300050507 Bacteria 5943
170 nmdc:mga05p37_51885_c1 3300050507 Bacteria 5043
171 nmdc:mga05p37_67383_c1 3300050507 Bacteria 4404
172 nmdc:mga09592_81936_c1 3300050508 Bacteria 2750
173 nmdc:mga0qj67_16585_c1 3300050509 Bacteria 5590
174 nmdc:mga08y16_164501_c1 3300050511 Bacteria 2305
175 nmdc:mga08y16_33030_c1 3300050511 Bacteria 5437
176 nmdc:mga0n895_33170_c1 3300050512 Bacteria 4961
177 nmdc:mga0n895_377_c1 3300050512 Bacteria 30222
178 nmdc:mga0rr50_12472_c1 3300050513 Bacteria 5496
179 nmdc:mga0rr50_14527_c1 3300050513 Bacteria 5169
180 nmdc:mga0rr50_2908_c1 3300050513 Bacteria 9772
181 nmdc:mga0rr50_3_c1 3300050513 Bacteria 353622
182 nmdc:mga0rr50_43282_c1 3300050513 Bacteria 3294
183 nmdc:mga08x19_179_c1 3300050514 Bacteria 50938
184 nmdc:mga08x19_20247_c1 3300050514 Bacteria 4096
185 nmdc:mga08x19_42348_c1 3300050514 Bacteria 2903
186 nmdc:mga0a205_61201_c1 3300050515 Bacteria 3636
187 Ga0495601_0004854 3300053077 Bacteria 7801
188 Ga0495601_0025634 3300053077 Bacteria 3637
189 Ga0500556_0002161 3300053104 Bacteria 6646
190 Ga0501084_0010290 3300054114 Bacteria 7738
191 Ga0501082_0018124 3300060353 Bacteria 6063
192 Ga0530510_0009388 3300061734 Bacteria 6859
193 Ga0114129_10210496
194 Ga0065715_10096568
195 Ga0070683_100000600
196 Ga0070670_100016794
197 Ga0070666_10019632
198 Ga0070680_100049252
199 Ga0070660_100027539
200 Ga0070671_100014790
201 Ga0070674_100000362
202 Ga0070688_100010052
203 Ga0070667_100019165
204 Ga0070713_100010843
205 Ga0070663_100028408
206 Ga0070681_10005230
207 Ga0070685_10002651
208 Ga0070707_100024851
209 Ga0070698_100008089
210 Ga0070698_100044156
211 Ga0070698_100046728
212 Ga0070699_100019549
213 Ga0070679_100037205
214 Ga0070684_100000070
215 Ga0070672_100013570
216 Ga0070686_100000401
217 Ga0070665_100004843
218 Ga0070665_100008329
219 Ga0070665_100047455
220 Ga0070704_100021246
221 Ga0070664_100000587
222 Ga0068854_100003857
223 Ga0068859_100119708
224 Ga0068864_100004468
225 Ga0068863_100008165
226 Ga0068858_100007999
227 Ga0068862_100005691
228 Ga0081455_10016526
229 Ga0097621_100003847
230 Ga0097621_100009814
231 Ga0068871_100045045
232 Ga0068871_100091346
233 Ga0075428_100017745
234 Ga0075428_100028824
235 Ga0075430_100006300
236 Ga0075433_10003176
237 Ga0075433_10023277
238 Ga0075433_10023684
239 Ga0075434_100000082
240 Ga0075434_100005581
241 Ga0075434_100062030
242 Ga0075434_100099739
243 Ga0068865_100005791
244 Ga0068865_100052354
245 Ga0075436_100000504
246 Ga0075436_100015021
247 Ga0075436_100028395
248 Ga0097620_100119713
249 Ga0075435_100000008
250 Ga0075435_100000184
251 Ga0075435_100004118
252 Ga0075435_100022375
253 Ga0075435_100043813
254 Ga0075435_100072326
255 Ga0111539_10073359
256 Ga0105245_10053608
257 Ga0114129_10000235
258 Ga0114129_10001454
259 Ga0114129_10004198
260 Ga0114129_10034351
261 Ga0114129_10052944
262 Ga0114129_10111980
263 Ga0114129_10132237
264 Ga0114129_10141605
265 Ga0105242_10004882
266 Ga0105242_10025276
267 Ga0105248_10009970
268 Ga0105248_10049765
269 Ga0105248_10077846
270 Ga0105248_10134848
271 Ga0157374_10012137
272 Ga0157378_10006436
273 Ga0163163_10004365
274 Ga0163163_10037497
275 Ga0163163_10089500
276 Ga0157379_10021441
277 Ga0157379_10022268
278 Ga0157379_10100829
279 Ga0157376_10019798
280 Ga0157376_10089625
281 Ga0207680_10005934
282 Ga0207707_10023386
283 Ga0207660_10040472
284 Ga0207657_10033798
285 Ga0207646_10022535
286 Ga0207650_10002415
287 Ga0207650_10067248
288 Ga0207659_10000106
289 Ga0207687_10056541
290 Ga0207644_10046710
291 Ga0207706_10047652
292 Ga0207670_10002923
293 Ga0207669_10005403
294 Ga0207711_10004025
295 Ga0207711_10046831
296 Ga0207711_10068181
297 Ga0207661_10007493
298 Ga0207679_10000681
299 Ga0207651_10009207
300 Ga0207651_10030072
301 Ga0207658_10012151
302 Ga0207703_10004941
303 Ga0207703_10021800
304 Ga0207678_10044211
305 Ga0207648_10025428
306 Ga0207648_10067324
307 Ga0207676_10015398
308 Ga0207675_100086823
309 Ga0268266_10008249
310 Ga0268266_10016360
311 Ga0373934_0021785
312 Ga0373949_0002130
313 Ga0373951_0006758
314 Ga0373952_0000969
315 Ga0373932_0002381
316 Ga0373939_0001415
317 Ga0373941_0001340
318 Ga0373953_0021813
319 Ga0373960_0002510
320 Ga0373955_0010569
321 Ga0373942_0002159
322 Ga0373961_0001267
323 Ga0373931_0012073
324 Ga0373947_0013261
325 Ga0373925_0044720
326 Ga0453684_0043457
327 Ga0451576_0015343
328 Ga0451576_0055068
329 Ga0495608_0002752
330 Ga0495645_0012667
331 Ga0495634_0052729
332 Ga0495669_0014156
333 Ga0495613_0032705
334 Ga0495604_0049198
335 Ga0495674_0009659
336 Ga0495680_0047924
337 Ga0495684_0001250
338 Ga0496101_0001070
339 Ga0496104_0003507
340 Ga0496104_0028134
341 Ga0496108_0008892
342 Ga0496109_0003150
343 Ga0496110_0000355
344 Ga0496112_0000346
345 Ga0496112_0004199
346 Ga0496113_0021652
347 Ga0496114_0000379
348 Ga0496114_0001800
349 Ga0501036_0008310
350 Ga0501039_0011673
351 Ga0501041_0002299
352 Ga0501042_0005232
353 Ga0501046_0008853
354 Ga0501075_0001242
355 Ga0501076_0000505
356 Ga0501077_0006008
357 Ga0501079_0006981
358 Ga0501081_0000062
359 Ga0501045_0000841
360 nmdc:mga05p37_101890_c1
361 nmdc:mga05p37_37508_c1
362 nmdc:mga05p37_51885_c1
363 nmdc:mga05p37_67383_c1
364 nmdc:mga09592_81936_c1
365 nmdc:mga0qj67_16585_c1
366 nmdc:mga08y16_164501_c1
367 nmdc:mga08y16_33030_c1
368 nmdc:mga0n895_33170_c1
369 nmdc:mga0n895_377_c1
370 nmdc:mga0rr50_12472_c1
371 nmdc:mga0rr50_14527_c1
372 nmdc:mga0rr50_2908_c1
373 nmdc:mga0rr50_3_c1
374 nmdc:mga0rr50_43282_c1
375 nmdc:mga08x19_179_c1
376 nmdc:mga08x19_20247_c1
377 nmdc:mga08x19_42348_c1
378 nmdc:mga0a205_61201_c1
379 Ga0495601_0004854
380 Ga0495601_0025634
381 Ga0500556_0002161
382 Ga0501084_0010290
383 Ga0501082_0018124
384 Ga0530510_0009388

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00202

Aminotran_3

Aminotransferase class-III

326

556

0.91

PF00202

Aminotran_3

Aminotransferase class-III

94

274

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
4ade-assembly2.cif.gz_B-3 structural and functional study of succinyl-ornithine transaminase from e. coli 0.7932 88 536
4ade-assembly2.cif.gz_B-3 structural and functional study of succinyl-ornithine transaminase from e. coli 0.7853 88 536
6w7x-assembly1.cif.gz_A-2 crystal structure of n-acetylornithine aminotransferase from stenotrophomonas maltophilia k279a 0.7797 76 537
5z6n-assembly1.cif.gz_B crystal structure of escherichia coli elaa 0.7768 562 740
2ord-assembly1.cif.gz_B crystal structure of acetylornithine aminotransferase (ec 2.6.1.11) (acoat) (tm1785) from thermotoga maritima at 1.40 a resolution 0.7755 70 533
ID Description Score Start End Superfamily
2cinA01 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9709 442 533 3.90.1150.10
af_Q9VW68_397_486_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9619 448 533 3.90.1150.10
af_P9WQ77_356_444_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9611 443 530 3.90.1150.10
af_P61922_409_498_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9473 446 534 3.90.1150.10
af_Q21217_392_483_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9471 445 533 3.90.1150.10
ID Description Score Start End GO Terms
AF-A0A7V3UVX3-F1-model_v4 Aminotransferase class III-fold pyridoxal phosphate-dependent enzyme 0.9717 453 535 GO:0008483
GO:0009450
GO:0030170
AF-A0A7V1U7J7-F1-model_v4 Aminotransferase class III-fold pyridoxal phosphate-dependent enzyme 0.9656 442 538 GO:0008483
GO:0009450
GO:0030170
AF-A0A1G3UE57-F1-model_v4 Acetylornithine aminotransferase 0.9489 443 534 GO:0008483
GO:0030170
GO:0042802
AF-A0A820LIL2-F1-model_v4 Uncharacterized protein 0.9451 447 534 GO:0005739
GO:0008483
GO:0009450
GO:0030170
AF-A0A7J2J856-F1-model_v4 Aminotransferase class III-fold pyridoxal phosphate-dependent enzyme 0.9435 448 535 GO:0008483
GO:0030170
GO:0042802

Map