F295507

General Info

Members Datasets Scaffolds Average Seq Length
192 143 187 515

Family's Representative Sequence

Representative Sequence 3300006852|Ga0075433_10009416|Ga0075433_100094163
Length 551
Sequence MRPAPSDDVTSYGPSVDPGWSVMSGVYCRPMFRSPHPEIDIPNLTLTEYVLGGAREFGDRPAFVDGLSGRTLSFGALLDQVRALAAGLSLSHRVGKGDVVAIWAPNVLEYPVVFHAVVSLGAILTTINPAYTTPEVSFQLRDANVKLLVTTAALAARAREAVEAAAASIEIVTIDDGPGLTPLASIGSDIDPPAVAIDPFNDVAVLPYSSGTTGLPKGVMLTHRNLVANLAQLDAIEGDISALVGVLPFFHIYGMVVIMNFGIVRGATVVTLPRFDLEAFLGALQNWRIPTVHIAPPIAVALAKHPLVDRYDLSALNCVFSAAAPLGIELTEAVERRLSVTVRQGYGMTEASPATHFSVAGFVRRGKVGTLIPGTECRIVDPSTGLDVGVGEVGEVWARGPQVMKGYLNNPEATAATVDADGWLHTGDIGFVDEDGFLEVTDRLKELIKVKGYQVAPAELEGLLLKHPKVADAAVIPVKDEEAGERPKAFIVASEAATAEEICAFVEAHVAHYKRLAQVEFVDAIPKSPSGKILRRVLVERDRASTRTPVS

Samples

Sample ID Description Type Environment
1 2738541274 Mycobacterium sp. YR708 Isolate Unclassified
2 2738543028 Mycobacterium sp. YR782 Isolate Unclassified
3 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
4 2852677369 Pseudoclavibacter sp. JAI123 Isolate Rhizosphere
5 2902799365 Mycolicibacterium sp. P1-5 Isolate Unclassified
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
11 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
16 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
19 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
20 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
23 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
24 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
25 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
32 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
33 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
34 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
35 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
36 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
37 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
38 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
39 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
40 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
41 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
42 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
43 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
44 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
45 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
48 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
51 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
52 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
53 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
54 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
55 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
56 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
57 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
58 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
59 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
60 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
61 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
62 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
63 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
90 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
91 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
92 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
93 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
94 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
95 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
96 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
97 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
98 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
99 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
100 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
101 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
102 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
103 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
104 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
105 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
106 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
107 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
108 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
109 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
110 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
111 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
112 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
113 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
114 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
115 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
116 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
117 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
124 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
125 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
126 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
127 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
128 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
129 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
131 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
132 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
133 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
134 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
135 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
136 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
137 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
138 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
139 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
140 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
141 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
142 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
143 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.4
Metatranscriptomes 0
Isolates 2.6

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.6
Nodule 0
Rhizoplane 1.04
Rhizosphere 92.71
Stem 0
Stem Tuber 0
Unclassified 3.65

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070676_10015098 3300005328 Bacteria 4257
2 Ga0070683_100024059 3300005329 Bacteria 5451
3 Ga0070683_100040933 3300005329 Bacteria 4261
4 Ga0070690_100027787 3300005330 Bacteria 3500
5 Ga0070670_100001352 3300005331 Bacteria 19635
6 Ga0070670_100027638 3300005331 Bacteria 4880
7 Ga0068869_100017860 3300005334 Bacteria 4819
8 Ga0070666_10011979 3300005335 Bacteria 5458
9 Ga0070689_100016850 3300005340 Bacteria 5356
10 Ga0070661_100004161 3300005344 Bacteria 9982
11 Ga0070661_100115043 3300005344 Bacteria 2011
12 Ga0070669_100065944 3300005353 Bacteria 2668
13 Ga0070675_100002075 3300005354 Bacteria 14827
14 Ga0070675_100015255 3300005354 Bacteria 6069
15 Ga0070675_100094434 3300005354 Bacteria 2509
16 Ga0070671_100006451 3300005355 Bacteria 9377
17 Ga0070667_100003889 3300005367 Bacteria 12681
18 Ga0070701_10012443 3300005438 Bacteria 3839
19 Ga0070708_100021793 3300005445 Bacteria 5425
20 Ga0070708_100047668 3300005445 Bacteria 3785
21 Ga0070678_100049314 3300005456 Bacteria 3038
22 Ga0070678_100075265 3300005456 Bacteria 2539
23 Ga0070681_10034777 3300005458 Bacteria 5060
24 Ga0068867_100000919 3300005459 Bacteria 20012
25 Ga0070706_100000102 3300005467 Bacteria 104490
26 Ga0070706_100000109 3300005467 Bacteria 100476
27 Ga0070706_100057293 3300005467 Bacteria 3596
28 Ga0070707_100016024 3300005468 Bacteria 7031
29 Ga0070707_100030172 3300005468 Bacteria 5160
30 Ga0070698_100002529 3300005471 Bacteria 20141
31 Ga0070698_100017823 3300005471 Bacteria 7480
32 Ga0070684_100048849 3300005535 Bacteria 3671
33 Ga0070672_100009085 3300005543 Bacteria 6833
34 Ga0070665_100024908 3300005548 Bacteria 6030
35 Ga0070664_100008995 3300005564 Bacteria 8099
36 Ga0070664_100022469 3300005564 Bacteria 5201
37 Ga0068859_100016785 3300005617 Bacteria 7351
38 Ga0068859_100063565 3300005617 Bacteria 3722
39 Ga0068864_100005045 3300005618 Bacteria 10813
40 Ga0068861_100056114 3300005719 Bacteria 3005
41 Ga0068861_100059972 3300005719 Bacteria 2914
42 Ga0068863_100007050 3300005841 Bacteria 11014
43 Ga0068858_100012572 3300005842 Bacteria 7982
44 Ga0068860_100005637 3300005843 Bacteria 12649
45 Ga0068860_100015905 3300005843 Bacteria 7343
46 Ga0081538_10008796 3300005981 Bacteria 8511
47 Ga0081538_10024100 3300005981 Bacteria 4347
48 Ga0081538_10027393 3300005981 Bacteria 3952
49 Ga0081538_10050038 3300005981 Bacteria 2529
50 Ga0081540_1034752 3300005983 Bacteria 2712
51 Ga0081539_10000058 3300005985 Bacteria 256212
52 Ga0081539_10000399 3300005985 Bacteria 92979
53 Ga0070717_10002373 3300006028 Bacteria 13279
54 Ga0075369_10018214 3300006186 Bacteria 2857
55 Ga0068871_100100324 3300006358 Bacteria 2425
56 Ga0075433_10009416 3300006852 Bacteria 7806
57 Ga0075434_100002718 3300006871 Bacteria 15622
58 Ga0075434_100090011 3300006871 Bacteria 3070
59 Ga0068865_100000314 3300006881 Bacteria 26796
60 Ga0097620_100016785 3300006931 Bacteria 7351
61 Ga0097620_100063565 3300006931 Bacteria 3722
62 Ga0111539_10091897 3300009094 Bacteria 3566
63 Ga0111539_10103453 3300009094 Bacteria 3342
64 Ga0111539_10304547 3300009094 Bacteria 1854
65 Ga0105245_10008818 3300009098 Bacteria 8798
66 Ga0105247_10003840 3300009101 Bacteria 9725
67 Ga0114129_10010630 3300009147 Bacteria 13127
68 Ga0105248_10014054 3300009177 Bacteria 8810
69 Ga0105248_10023836 3300009177 Bacteria 6802
70 Ga0105238_10008758 3300009551 Bacteria 10123
71 Ga0105249_10036222 3300009553 Bacteria 4476
72 Ga0105239_10083473 3300010375 Bacteria 3518
73 Ga0105246_10022515 3300011119 Bacteria 4065
74 Ga0157374_10115915 3300013296 Bacteria 2581
75 Ga0163162_10028092 3300013306 Bacteria 5564
76 Ga0163162_10073073 3300013306 Bacteria 3485
77 Ga0157375_10082557 3300013308 Bacteria 3256
78 Ga0157375_10164001 3300013308 Bacteria 2366
79 Ga0163163_10024014 3300014325 Bacteria 5799
80 Ga0157380_10038359 3300014326 Bacteria 3719
81 Ga0182008_10006010 3300014497 Bacteria 6834
82 Ga0157376_10032295 3300014969 Bacteria 4202
83 Ga0163161_10040956 3300017792 Bacteria 3328
84 Ga0207710_10006003 3300025900 Bacteria 5205
85 Ga0207680_10026006 3300025903 Bacteria 3237
86 Ga0207645_10002078 3300025907 Bacteria 16024
87 Ga0207643_10042081 3300025908 Bacteria 2575
88 Ga0207684_10000040 3300025910 Bacteria 262703
89 Ga0207684_10000087 3300025910 Bacteria 173557
90 Ga0207684_10084072 3300025910 Bacteria 2710
91 Ga0207707_10064380 3300025912 Bacteria 3191
92 Ga0207649_10031258 3300025920 Bacteria 3163
93 Ga0207646_10001679 3300025922 Bacteria 26968
94 Ga0207646_10005043 3300025922 Bacteria 14049
95 Ga0207650_10039690 3300025925 Bacteria 3440
96 Ga0207659_10000982 3300025926 Bacteria 16999
97 Ga0207644_10010508 3300025931 Bacteria 6101
98 Ga0207706_10015639 3300025933 Bacteria 6856
99 Ga0207686_10013970 3300025934 Bacteria 4457
100 Ga0207670_10014403 3300025936 Bacteria 4693
101 Ga0207704_10010631 3300025938 Bacteria 4497
102 Ga0207711_10010418 3300025941 Bacteria 7717
103 Ga0207689_10052707 3300025942 Bacteria 3352
104 Ga0207661_10029491 3300025944 Bacteria 4215
105 Ga0207661_10029633 3300025944 Bacteria 4206
106 Ga0207679_10003871 3300025945 Bacteria 9281
107 Ga0207679_10008388 3300025945 Bacteria 6580
108 Ga0207679_10048721 3300025945 Bacteria 3086
109 Ga0207712_10023850 3300025961 Bacteria 4043
110 Ga0207703_10016846 3300026035 Bacteria 5699
111 Ga0207708_10028940 3300026075 Bacteria 4195
112 Ga0207675_100012279 3300026118 Bacteria 8002
113 Ga0207675_100034761 3300026118 Bacteria 4700
114 Ga0207683_10008942 3300026121 Bacteria 8530
115 Ga0207683_10070403 3300026121 Bacteria 3090
116 Ga0268266_10030508 3300028379 Bacteria 4581
117 Ga0268264_10031503 3300028381 Bacteria 4346
118 Ga0307511_10003079 3300030521 Bacteria 17201
119 Ga0265327_10008645 3300031251 Bacteria 7541
120 Ga0307408_100095806 3300031548 Bacteria 2250
121 Ga0307405_10005837 3300031731 Bacteria 5994
122 Ga0307413_10027836 3300031824 Bacteria 3139
123 Ga0307413_10038367 3300031824 Bacteria 2776
124 Ga0307410_10008146 3300031852 Bacteria 5793
125 Ga0307410_10034285 3300031852 Bacteria 3286
126 Ga0307406_10038091 3300031901 Bacteria 2974
127 Ga0307416_100006401 3300032002 Bacteria 7369
128 Ga0307416_100112950 3300032002 Bacteria 2399
129 Ga0307416_100152959 3300032002 Bacteria 2119
130 Ga0307415_100027787 3300032126 Bacteria 3589
131 Ga0316574_0043364 3300035398 Bacteria 2780
132 Ga0373937_0036354 3300036401 Bacteria 4488
133 Ga0395898_0078921 3300037466 Bacteria 3176
134 Ga0395901_0007014 3300038443 Bacteria 11387
135 Ga0395901_0031188 3300038443 Bacteria 5495
136 Ga0400483_243638 3300039062 Unclassified 1961
137 Ga0451853_3490629 3300041512 Bacteria 7206
138 Ga0439446_0003118 3300042156 Bacteria 4078
139 Ga0439434_0021615 3300042435 Bacteria 1933
140 Ga0439435_0003115 3300042436 Bacteria 3403
141 Ga0451576_0002273 3300045051 Bacteria 29322
142 Ga0495603_0021062 3300046455 Bacteria 3948
143 Ga0495629_0091764 3300046459 Bacteria 2120
144 Ga0495638_0007953 3300046460 Bacteria 7563
145 Ga0495631_0027480 3300046518 Bacteria 2603
146 Ga0495656_0005857 3300046615 Bacteria 4274
147 Ga0495677_0016287 3300047445 Bacteria 2697
148 Ga0495615_0006535 3300048090 Bacteria 2166
149 Ga0496104_0077647 3300048907 Bacteria 3164
150 Ga0496112_0006902 3300048915 Bacteria 10016
151 Ga0501038_0006666 3300049574 Bacteria 10674
152 Ga0501039_0067604 3300049575 Bacteria 2775
153 Ga0501040_0021980 3300049576 Bacteria 4265
154 Ga0501041_0022877 3300049577 Bacteria 3745
155 Ga0501041_0042821 3300049577 Bacteria 2752
156 Ga0501043_0031703 3300049579 Bacteria 4155
157 Ga0501048_0038795 3300049582 Bacteria 3418
158 Ga0501068_0050093 3300049584 Bacteria 2524
159 Ga0501071_0028460 3300049587 Bacteria 3939
160 Ga0501071_0060998 3300049587 Bacteria 2731
161 Ga0501071_0120748 3300049587 Bacteria 1942
162 Ga0501072_0095154 3300049588 Bacteria 2367
163 Ga0501072_0135515 3300049588 Bacteria 1963
164 Ga0501073_0010636 3300049589 Bacteria 6734
165 Ga0501076_0002928 3300049592 Bacteria 11836
166 Ga0501076_0126884 3300049592 Bacteria 2068
167 Ga0501081_0016652 3300049743 Bacteria 4860
168 Ga0501081_0037298 3300049743 Bacteria 3316
169 Ga0501035_0017779 3300049822 Bacteria 6558
170 Ga0501045_0001509 3300049824 Bacteria 15503
171 Ga0501045_0084691 3300049824 Bacteria 2339
172 nmdc:mga05p37_95219_c1 3300050507 Bacteria 3668
173 nmdc:mga09592_142218_c1 3300050508 Bacteria 2068
174 nmdc:mga08y16_15951_c1 3300050511 Bacteria 7898
175 nmdc:mga08y16_31917_c1 3300050511 Bacteria 5538
176 nmdc:mga08y16_99697_c1 3300050511 Bacteria 3025
177 nmdc:mga0n895_88620_c1 3300050512 Bacteria 3094
178 nmdc:mga0a205_2639_c1 3300050515 Bacteria 15837
179 nmdc:mga0a205_7188_c1 3300050515 Bacteria 10065
180 Ga0495601_0024899 3300053077 Bacteria 3687
181 Ga0500583_0035269 3300053092 Bacteria 2231
182 Ga0500642_0027559 3300053130 Bacteria 2334
183 Ga0500652_018649 3300053131 Bacteria 2565
184 Ga0500645_000181 3300053730 Bacteria 49626
185 Ga0501084_0065740 3300054114 Bacteria 3034
186 Ga0501082_0010340 3300060353 Bacteria 8032
187 Ga0530510_0037576 3300061734 Bacteria 3494

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046460 Ga0495638_0007953 Ga0495638_0007953_5956_7335 447
2 3300053131 Ga0500652_018649 Ga0500652_018649_898_2277 447
3 3300053730 Ga0500645_000181 Ga0500645_000181_14902_16281 447
4 iso_pu_bacteria 2738541274 2738707849 448
5 iso_pu_bacteria 2738543028 2739334188 448
6 iso_pu_bacteria 2902799365 2902802018 448
7 3300006186 Ga0075369_10018214 Ga0075369_100182143 452
8 3300047445 Ga0495677_0016287 Ga0495677_0016287_1206_2657 468
9 3300053130 Ga0500642_0027559 Ga0500642_0027559_608_2065 472
10 3300031251 Ga0265327_10008645 Ga0265327_100086458 474
11 3300050515 nmdc:mga0a205_2639_c1 nmdc:mga0a205_2639_c1_13742_15307 475
12 3300038443 Ga0395901_0031188 Ga0395901_0031188_2225_3769 476
13 3300005468 Ga0070707_100016024 Ga0070707_1000160245 477
14 3300025910 Ga0207684_10084072 Ga0207684_100840722 477
15 3300050511 nmdc:mga08y16_31917_c1 nmdc:mga08y16_31917_c1_1728_3290 480
16 3300025912 Ga0207707_10064380 Ga0207707_100643803 488
17 3300049574 Ga0501038_0006666 Ga0501038_0006666_1625_3184 489
18 3300049576 Ga0501040_0021980 Ga0501040_0021980_1334_2893 489
19 3300049577 Ga0501041_0042821 Ga0501041_0042821_865_2424 489
20 3300049579 Ga0501043_0031703 Ga0501043_0031703_1456_3015 489
21 3300049582 Ga0501048_0038795 Ga0501048_0038795_1714_3273 489
22 3300049584 Ga0501068_0050093 Ga0501068_0050093_463_2022 489
23 3300049587 Ga0501071_0028460 Ga0501071_0028460_2092_3651 489
24 3300049588 Ga0501072_0135515 Ga0501072_0135515_20_1579 489
25 3300049743 Ga0501081_0016652 Ga0501081_0016652_955_2514 489
26 3300049822 Ga0501035_0017779 Ga0501035_0017779_2101_3660 489
27 3300049824 Ga0501045_0001509 Ga0501045_0001509_8340_9899 489
28 3300054114 Ga0501084_0065740 Ga0501084_0065740_181_1740 489
29 3300060353 Ga0501082_0010340 Ga0501082_0010340_5022_6581 489
30 3300048907 Ga0496104_0077647 Ga0496104_0077647_258_1814 490
31 3300039062 Ga0400483_243638 Ga0400483_243638_380_1906 491
32 3300005617 Ga0068859_100063565 Ga0068859_1000635653 494
33 3300005842 Ga0068858_100012572 Ga0068858_1000125728 494
34 3300006931 Ga0097620_100063565 Ga0097620_1000635652 494
35 3300026035 Ga0207703_10016846 Ga0207703_100168463 494
36 3300030521 Ga0307511_10003079 Ga0307511_1000307914 494
37 iso_pu_bacteria 2784746768 2785372966 494
38 3300006358 Ga0068871_100100324 Ga0068871_1001003242 496
39 3300041512 Ga0451853_3490629 Ga0451853_3490629_1109_2692 498
40 iso_pu_bacteria 2852677369 2852678296 498
41 3300009094 Ga0111539_10304547 Ga0111539_103045472 499
42 3300005329 Ga0070683_100024059 Ga0070683_1000240594 500
43 3300005535 Ga0070684_100048849 Ga0070684_1000488492 500
44 3300025944 Ga0207661_10029633 Ga0207661_100296333 500
45 3300025945 Ga0207679_10048721 Ga0207679_100487212 500
46 3300042156 Ga0439446_0003118 Ga0439446_0003118_1369_2904 501
47 3300042435 Ga0439434_0021615 Ga0439434_0021615_288_1823 501
48 3300049588 Ga0501072_0095154 Ga0501072_0095154_59_1618 501
49 3300049592 Ga0501076_0126884 Ga0501076_0126884_165_1724 501
50 3300049743 Ga0501081_0037298 Ga0501081_0037298_539_2098 501
51 3300049824 Ga0501045_0084691 Ga0501045_0084691_685_2244 501
52 3300005981 Ga0081538_10027393 Ga0081538_100273934 502
53 3300035398 Ga0316574_0043364 Ga0316574_0043364_76_1647 503
54 3300005981 Ga0081538_10008796 Ga0081538_100087966 504
55 3300038443 Ga0395901_0007014 Ga0395901_0007014_5335_6897 504
56 3300045051 Ga0451576_0002273 Ga0451576_0002273_18528_20084 505
57 3300005329 Ga0070683_100040933 Ga0070683_1000409333 507
58 3300005330 Ga0070690_100027787 Ga0070690_1000277873 507
59 3300005331 Ga0070670_100001352 Ga0070670_10000135217 507
60 3300005335 Ga0070666_10011979 Ga0070666_100119793 507
61 3300005344 Ga0070661_100004161 Ga0070661_1000041614 507
62 3300005367 Ga0070667_100003889 Ga0070667_1000038897 507
63 3300005548 Ga0070665_100024908 Ga0070665_1000249083 507
64 3300005564 Ga0070664_100008995 Ga0070664_1000089956 507
65 3300005617 Ga0068859_100016785 Ga0068859_1000167853 507
66 3300005618 Ga0068864_100005045 Ga0068864_1000050457 507
67 3300005841 Ga0068863_100007050 Ga0068863_1000070503 507
68 3300005843 Ga0068860_100005637 Ga0068860_1000056376 507
69 3300005985 Ga0081539_10000058 Ga0081539_10000058125 507
70 3300005985 Ga0081539_10000399 Ga0081539_100003995 507
71 3300006931 Ga0097620_100016785 Ga0097620_1000167853 507
72 3300025900 Ga0207710_10006003 Ga0207710_100060034 507
73 3300025903 Ga0207680_10026006 Ga0207680_100260061 507
74 3300025931 Ga0207644_10010508 Ga0207644_100105083 507
75 3300025941 Ga0207711_10010418 Ga0207711_100104186 507
76 3300025944 Ga0207661_10029491 Ga0207661_100294912 507
77 3300025945 Ga0207679_10008388 Ga0207679_100083882 507
78 3300028379 Ga0268266_10030508 Ga0268266_100305082 507
79 3300005354 Ga0070675_100015255 Ga0070675_1000152552 508
80 3300005445 Ga0070708_100047668 Ga0070708_1000476682 508
81 3300005456 Ga0070678_100075265 Ga0070678_1000752652 508
82 3300005458 Ga0070681_10034777 Ga0070681_100347771 508
83 3300005467 Ga0070706_100000109 Ga0070706_10000010966 508
84 3300005471 Ga0070698_100002529 Ga0070698_10000252918 508
85 3300005719 Ga0068861_100059972 Ga0068861_1000599723 508
86 3300005983 Ga0081540_1034752 Ga0081540_10347522 508
87 3300006028 Ga0070717_10002373 Ga0070717_100023738 508
88 3300009098 Ga0105245_10008818 Ga0105245_100088184 508
89 3300009101 Ga0105247_10003840 Ga0105247_100038402 508
90 3300009177 Ga0105248_10014054 Ga0105248_100140547 508
91 3300009551 Ga0105238_10008758 Ga0105238_100087585 508
92 3300009553 Ga0105249_10036222 Ga0105249_100362222 508
93 3300010375 Ga0105239_10083473 Ga0105239_100834732 508
94 3300011119 Ga0105246_10022515 Ga0105246_100225152 508
95 3300013306 Ga0163162_10028092 Ga0163162_100280923 508
96 3300013306 Ga0163162_10073073 Ga0163162_100730733 508
97 3300013308 Ga0157375_10164001 Ga0157375_101640012 508
98 3300014325 Ga0163163_10024014 Ga0163163_100240144 508
99 3300014497 Ga0182008_10006010 Ga0182008_100060106 508
100 3300014969 Ga0157376_10032295 Ga0157376_100322953 508
101 3300017792 Ga0163161_10040956 Ga0163161_100409562 508
102 3300025910 Ga0207684_10000040 Ga0207684_1000004034 508
103 3300025922 Ga0207646_10005043 Ga0207646_1000504310 508
104 3300025926 Ga0207659_10000982 Ga0207659_100009822 508
105 3300025933 Ga0207706_10015639 Ga0207706_100156392 508
106 3300025961 Ga0207712_10023850 Ga0207712_100238503 508
107 3300026118 Ga0207675_100012279 Ga0207675_1000122795 508
108 3300026121 Ga0207683_10008942 Ga0207683_100089424 508
109 3300031731 Ga0307405_10005837 Ga0307405_100058373 508
110 3300031824 Ga0307413_10027836 Ga0307413_100278362 508
111 3300031852 Ga0307410_10008146 Ga0307410_100081462 508
112 3300031901 Ga0307406_10038091 Ga0307406_100380912 508
113 3300032002 Ga0307416_100006401 Ga0307416_1000064012 508
114 3300046455 Ga0495603_0021062 Ga0495603_0021062_1577_3133 508
115 3300046459 Ga0495629_0091764 Ga0495629_0091764_58_1614 508
116 3300046518 Ga0495631_0027480 Ga0495631_0027480_656_2230 508
117 3300046615 Ga0495656_0005857 Ga0495656_0005857_1867_3441 508
118 3300048090 Ga0495615_0006535 Ga0495615_0006535_88_1662 508
119 3300048915 Ga0496112_0006902 Ga0496112_0006902_1458_3014 508
120 3300049587 Ga0501071_0060998 Ga0501071_0060998_97_1650 508
121 3300049589 Ga0501073_0010636 Ga0501073_0010636_4135_5700 508
122 3300053077 Ga0495601_0024899 Ga0495601_0024899_1301_2857 508
123 3300005445 Ga0070708_100021793 Ga0070708_1000217936 509
124 3300005467 Ga0070706_100000102 Ga0070706_10000010215 509
125 3300005468 Ga0070707_100030172 Ga0070707_1000301726 509
126 3300005471 Ga0070698_100017823 Ga0070698_1000178233 509
127 3300005981 Ga0081538_10024100 Ga0081538_100241002 509
128 3300006871 Ga0075434_100090011 Ga0075434_1000900112 509
129 3300009094 Ga0111539_10091897 Ga0111539_100918972 509
130 3300009177 Ga0105248_10023836 Ga0105248_100238365 509
131 3300013296 Ga0157374_10115915 Ga0157374_101159152 509
132 3300013308 Ga0157375_10082557 Ga0157375_100825573 509
133 3300025910 Ga0207684_10000087 Ga0207684_10000087162 509
134 3300025922 Ga0207646_10001679 Ga0207646_1000167921 509
135 3300031548 Ga0307408_100095806 Ga0307408_1000958062 509
136 3300031824 Ga0307413_10038367 Ga0307413_100383671 509
137 3300031852 Ga0307410_10034285 Ga0307410_100342852 509
138 3300050508 nmdc:mga09592_142218_c1 nmdc:mga09592_142218_c1_488_2044 509
139 3300050511 nmdc:mga08y16_15951_c1 nmdc:mga08y16_15951_c1_1433_2989 509
140 3300050512 nmdc:mga0n895_88620_c1 nmdc:mga0n895_88620_c1_236_1792 509
141 3300005467 Ga0070706_100057293 Ga0070706_1000572933 510
142 3300009147 Ga0114129_10010630 Ga0114129_100106308 510
143 3300050507 nmdc:mga05p37_95219_c1 nmdc:mga05p37_95219_c1_1787_3346 510
144 3300050515 nmdc:mga0a205_7188_c1 nmdc:mga0a205_7188_c1_3377_4942 510
145 3300053092 Ga0500583_0035269 Ga0500583_0035269_426_1988 510
146 3300005981 Ga0081538_10050038 Ga0081538_100500381 511
147 3300006852 Ga0075433_10009416 Ga0075433_100094163 511
148 3300006871 Ga0075434_100002718 Ga0075434_1000027184 511
149 3300032002 Ga0307416_100112950 Ga0307416_1001129501 511
150 3300032002 Ga0307416_100152959 Ga0307416_1001529592 511
151 3300032126 Ga0307415_100027787 Ga0307415_1000277873 511
152 3300037466 Ga0395898_0078921 Ga0395898_0078921_1019_2605 511
153 3300042436 Ga0439435_0003115 Ga0439435_0003115_834_2396 511
154 3300049575 Ga0501039_0067604 Ga0501039_0067604_189_1751 511
155 3300049577 Ga0501041_0022877 Ga0501041_0022877_556_2118 511
156 3300049587 Ga0501071_0120748 Ga0501071_0120748_71_1633 511
157 3300049592 Ga0501076_0002928 Ga0501076_0002928_119_1681 511
158 3300061734 Ga0530510_0037576 Ga0530510_0037576_1906_3468 511
159 3300005328 Ga0070676_10015098 Ga0070676_100150983 512
160 3300005331 Ga0070670_100027638 Ga0070670_1000276383 512
161 3300005334 Ga0068869_100017860 Ga0068869_1000178604 512
162 3300005340 Ga0070689_100016850 Ga0070689_1000168502 512
163 3300005344 Ga0070661_100115043 Ga0070661_1001150432 512
164 3300005353 Ga0070669_100065944 Ga0070669_1000659441 512
165 3300005354 Ga0070675_100002075 Ga0070675_1000020752 512
166 3300005354 Ga0070675_100094434 Ga0070675_1000944342 512
167 3300005355 Ga0070671_100006451 Ga0070671_1000064517 512
168 3300005438 Ga0070701_10012443 Ga0070701_100124432 512
169 3300005456 Ga0070678_100049314 Ga0070678_1000493143 512
170 3300005459 Ga0068867_100000919 Ga0068867_10000091914 512
171 3300005543 Ga0070672_100009085 Ga0070672_1000090853 512
172 3300005564 Ga0070664_100022469 Ga0070664_1000224693 512
173 3300005719 Ga0068861_100056114 Ga0068861_1000561142 512
174 3300005843 Ga0068860_100015905 Ga0068860_1000159055 512
175 3300006881 Ga0068865_100000314 Ga0068865_10000031422 512
176 3300009094 Ga0111539_10103453 Ga0111539_101034532 512
177 3300014326 Ga0157380_10038359 Ga0157380_100383594 512
178 3300025907 Ga0207645_10002078 Ga0207645_1000207818 512
179 3300025908 Ga0207643_10042081 Ga0207643_100420812 512
180 3300025920 Ga0207649_10031258 Ga0207649_100312582 512
181 3300025925 Ga0207650_10039690 Ga0207650_100396902 512
182 3300025934 Ga0207686_10013970 Ga0207686_100139702 512
183 3300025936 Ga0207670_10014403 Ga0207670_100144033 512
184 3300025938 Ga0207704_10010631 Ga0207704_100106312 512
185 3300025942 Ga0207689_10052707 Ga0207689_100527073 512
186 3300025945 Ga0207679_10003871 Ga0207679_100038719 512
187 3300026075 Ga0207708_10028940 Ga0207708_100289401 512
188 3300026118 Ga0207675_100034761 Ga0207675_1000347614 512
189 3300026121 Ga0207683_10070403 Ga0207683_100704032 512
190 3300028381 Ga0268264_10031503 Ga0268264_100315034 512
191 3300036401 Ga0373937_0036354 Ga0373937_0036354_25_1590 512
192 3300050511 nmdc:mga08y16_99697_c1 nmdc:mga08y16_99697_c1_1260_2831 512

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13193

AMP-binding_C

AMP-binding enzyme C-terminal domain

459

532

0.95

PF00501

AMP-binding

AMP-binding enzyme

52

408

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ni2-assembly1.cif.gz_A crystal structures and enzymatic mechanisms of a populus tomentosa 4-coumarate:coa ligase 0.9357 1 502
5bsv-assembly1.cif.gz_A crystal structure of 4-coumarate:coa ligase complexed with feruloyl adenylate 0.9274 1 500
3tsy-assembly1.cif.gz_A-2 4-coumaroyl-coa ligase::stilbene synthase fusion protein 0.9246 2 405
5u95-assembly1.cif.gz_A structure of the open conformation of 4-coumarate-coa ligase from nicotiana tabacum 0.9234 1 405
6q2m-assembly3.cif.gz_C crystal structure of photinus pyralis luciferase pps6 mutant in complex with dlsa 0.9206 2 400
ID Description Score Start End Superfamily
af_A0A368UIA6_474_561_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9664 409 486 3.30.300.30
af_Q9VXZ8_63_495_3.40.50.12780 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;ANL, N-terminal domain 0.9572 3 400 3.40.50.12780
af_Q9VXZ8_496_596_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9536 409 502 3.30.300.30
af_A0A0R0JS26_74_160_3.40.50.980 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9507 45 128 3.40.50.980
af_A0A1D6KNL0_124_190_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.947 411 474 3.30.300.30
ID Description Score Start End GO Terms
AF-A0A7K2NKR7-F1-model_v4 AMP-binding protein 0.9675 3 328 GO:0016405
AF-A0A2V7B7H1-F1-model_v4 4-coumarate--CoA ligase family protein 0.9611 3 321 GO:0016405
AF-A0A7K2NKR7-F1-model_v4 AMP-binding protein 0.9475 3 328 GO:0016405
AF-A0A382KSY1-F1-model_v4 AMP-dependent synthetase/ligase domain-containing protein 0.944 17 377
AF-A0A1J3D355-F1-model_v4 Putative acyl-activating enzyme 16, chloroplastic 0.9408 288 401 GO:0008922
GO:0009507
GO:0030497

Feature Viewer

pLDDT pTM Quality
90.68 0.87 High
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Predicted Structure (AlphaFold2)

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