F295472

General Info

Members Datasets Scaffolds Average Seq Length
192 113 384 327

Family's Representative Sequence

Representative Sequence 3300006237|Ga0097621_100167408|Ga0097621_1001674081
Length 384
Sequence LEDQLRKHRAVPQNAQFRLRTQFCSMRSHSLICSRLTVCFQGRNLYPVSLLSERESGFLSLNATMRQFLTIATNAFMELVRQPVFLLLMTTSSAFEIFLATPYYFAFGDEPKLVKNSTLAAMLLAGLFGAVLSASASLAREIRSGTALAVLSKPVGRTRFLLAKYTGLMLALTLLTYVNMIAALLASRMAFDAYGSTDLFAVGVFALGIVVAYLMGGFSNFFLRRPFVSDAVFGLILALTLAFVVISFYDKEVKPQEFAKGTDWNLLPASVLVLFALWILAGIALACSTRFDVIPTLAICSALFLIGIMSDYLFGRPAAQGSWWGSVLYTIAPNWQLFWLADALDAGKNTFQWAYVGKAFAYVVAYVGAVLAIAIVMFEDRELS

Samples

Sample ID Description Type Environment
1 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
8 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
9 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
12 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
15 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
18 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
24 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
25 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
26 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
27 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
28 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
29 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
30 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
32 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
33 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
35 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
37 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
38 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
39 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
40 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
41 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
42 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
43 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
44 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
60 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
61 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
62 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
63 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
64 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
65 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
66 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
67 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
68 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
69 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
70 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
71 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
72 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
73 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
74 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
75 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
76 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
77 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
78 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
79 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
80 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
81 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
82 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
83 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
84 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
85 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
86 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
87 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
88 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
89 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
90 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
91 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
92 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
93 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
94 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
95 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
96 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
97 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
98 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
99 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
100 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
101 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
102 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
103 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
104 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
105 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
107 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
112 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
113 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.04
Rhizosphere 97.92
Stem 0
Stem Tuber 0
Unclassified 28.65

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0097621_100167408 3300006237 Bacteria 1893
2 rootH1_10142208 3300003323 Unclassified 1100
3 Ga0065712_10085431 3300005290 Bacteria 2698
4 Ga0070658_10053993 3300005327 Unclassified 3262
5 Ga0070690_100000421 3300005330 Bacteria 21495
6 Ga0070690_100121598 3300005330 Bacteria 1753
7 Ga0070689_100105120 3300005340 Bacteria 2239
8 Ga0070691_10113546 3300005341 Bacteria 1357
9 Ga0070673_100419599 3300005364 Unclassified 1199
10 Ga0070688_100019109 3300005365 Bacteria 3967
11 Ga0070688_100119801 3300005365 Bacteria 1761
12 Ga0070714_100021130 3300005435 Bacteria 5322
13 Ga0070714_100205111 3300005435 Unclassified 1805
14 Ga0070701_10017175 3300005438 Unclassified 3378
15 Ga0070694_100006406 3300005444 Bacteria 7140
16 Ga0070681_10050584 3300005458 Bacteria 4146
17 Ga0070681_10074433 3300005458 Unclassified 3357
18 Ga0070685_10107750 3300005466 Unclassified 1711
19 Ga0070685_10150963 3300005466 Bacteria 1472
20 Ga0070707_100613654 3300005468 Unclassified 1050
21 Ga0070679_100046329 3300005530 Unclassified 4334
22 Ga0070679_100270287 3300005530 Unclassified 1654
23 Ga0070686_100310836 3300005544 Bacteria 1172
24 Ga0070704_100214219 3300005549 Bacteria 1562
25 Ga0068855_100017764 3300005563 Bacteria 8551
26 Ga0068855_100027658 3300005563 Bacteria 6784
27 Ga0068855_100067051 3300005563 Bacteria 4183
28 Ga0068855_100087496 3300005563 Unclassified 3601
29 Ga0068856_100090144 3300005614 Unclassified 3050
30 Ga0068856_100292248 3300005614 Bacteria 1646
31 Ga0070702_100164926 3300005615 Unclassified 1436
32 Ga0068859_100083861 3300005617 Bacteria 3231
33 Ga0068859_100319595 3300005617 Unclassified 1646
34 Ga0068863_100022439 3300005841 Bacteria 6029
35 Ga0068858_100205945 3300005842 Unclassified 1861
36 Ga0070712_100133100 3300006175 Unclassified 1887
37 Ga0070712_100205476 3300006175 Unclassified 1550
38 Ga0068871_100085543 3300006358 Bacteria 2619
39 Ga0075428_100005589 3300006844 Bacteria 13960
40 Ga0075430_100044210 3300006846 Unclassified 3768
41 Ga0075429_100355373 3300006880 Unclassified 1283
42 Ga0097620_100014705 3300006931 Bacteria 7864
43 Ga0097620_100083867 3300006931 Bacteria 3231
44 Ga0097620_100319595 3300006931 Unclassified 1646
45 Ga0099794_10111013 3300007265 Bacteria 1374
46 Ga0105240_10032304 3300009093 Bacteria 6779
47 Ga0105240_10209720 3300009093 Bacteria 2277
48 Ga0105240_10263115 3300009093 Bacteria 1989
49 Ga0111539_10126327 3300009094 Bacteria 2996
50 Ga0111539_10131995 3300009094 Bacteria 2925
51 Ga0111539_10193017 3300009094 Bacteria 2376
52 Ga0111539_10491838 3300009094 Unclassified 1429
53 Ga0111539_10503535 3300009094 Bacteria 1411
54 Ga0111539_10511576 3300009094 Bacteria 1398
55 Ga0105245_10695436 3300009098 Bacteria 1050
56 Ga0114129_10520372 3300009147 Unclassified 1551
57 Ga0105237_10234276 3300009545 Unclassified 1837
58 Ga0105238_10004148 3300009551 Bacteria 14376
59 Ga0105238_10020515 3300009551 Bacteria 6728
60 Ga0105249_10104651 3300009553 Bacteria 2667
61 Ga0157370_10131187 3300013104 Bacteria 2337
62 Ga0157370_10261520 3300013104 Unclassified 1599
63 Ga0157374_10169913 3300013296 Bacteria 2126
64 Ga0157375_10000111 3300013308 Bacteria 79589
65 Ga0163163_10000010 3300014325 Bacteria 264773
66 Ga0163163_10230418 3300014325 Bacteria 1901
67 Ga0157376_10040103 3300014969 Bacteria 3825
68 Ga0207705_10290219 3300025909 Unclassified 1253
69 Ga0207707_10046018 3300025912 Bacteria 3800
70 Ga0207663_10000677 3300025916 Bacteria 15091
71 Ga0207652_10069382 3300025921 Unclassified 3060
72 Ga0207694_10007050 3300025924 Bacteria 8531
73 Ga0207694_10011488 3300025924 Bacteria 6684
74 Ga0207664_10074945 3300025929 Unclassified 2735
75 Ga0207664_10193777 3300025929 Unclassified 1751
76 Ga0207686_10190513 3300025934 Bacteria 1461
77 Ga0207670_10014680 3300025936 Bacteria 4657
78 Ga0207670_10023483 3300025936 Unclassified 3840
79 Ga0207670_10066273 3300025936 Bacteria 2480
80 Ga0207667_10020570 3300025949 Bacteria 7334
81 Ga0207667_10173424 3300025949 Unclassified 2216
82 Ga0207651_10236362 3300025960 Unclassified 1487
83 Ga0207712_10035669 3300025961 Bacteria 3381
84 Ga0207703_10313799 3300026035 Unclassified 1434
85 Ga0207702_10003341 3300026078 Bacteria 14713
86 Ga0207641_10025745 3300026088 Bacteria 4851
87 Ga0207674_10095118 3300026116 Bacteria 2965
88 Ga0265337_1000067 3300028556 Bacteria 48544
89 Ga0265334_10011116 3300028573 Unclassified 3794
90 Ga0265322_10005143 3300028654 Bacteria 3874
91 Ga0265336_10010027 3300028666 Bacteria 3252
92 Ga0265336_10031087 3300028666 Bacteria 1660
93 Ga0265336_10043390 3300028666 Bacteria 1371
94 Ga0265338_10000242 3300028800 Bacteria 101378
95 Ga0265338_10004798 3300028800 Bacteria 18070
96 Ga0265338_10014394 3300028800 Bacteria 8805
97 Ga0265338_10014624 3300028800 Bacteria 8707
98 Ga0265338_10039477 3300028800 Bacteria 4451
99 Ga0265338_10051691 3300028800 Bacteria 3696
100 Ga0265338_10055423 3300028800 Unclassified 3526
101 Ga0265338_10086233 3300028800 Unclassified 2614
102 Ga0265338_10105737 3300028800 Bacteria 2280
103 Ga0265338_10125354 3300028800 Unclassified 2039
104 Ga0265338_10137617 3300028800 Bacteria 1917
105 Ga0265324_10007234 3300029957 Bacteria 4525
106 Ga0265324_10010926 3300029957 Unclassified 3479
107 Ga0265320_10002454 3300031240 Bacteria 12904
108 Ga0265320_10028141 3300031240 Bacteria 2921
109 Ga0265325_10060982 3300031241 Bacteria 1914
110 Ga0265327_10001384 3300031251 Bacteria 30970
111 Ga0265327_10041884 3300031251 Bacteria 2463
112 Ga0265316_10019328 3300031344 Bacteria 5829
113 Ga0265316_10047563 3300031344 Bacteria 3393
114 Ga0265316_10164988 3300031344 Unclassified 1655
115 Ga0265316_10200527 3300031344 Bacteria 1479
116 Ga0307509_10270604 3300031507 Unclassified 1467
117 Ga0265314_10021999 3300031711 Bacteria 4890
118 Ga0265314_10045409 3300031711 Bacteria 3107
119 Ga0316576_10196233 3300031727 Unclassified 1521
120 Ga0316580_10039701 3300032139 Unclassified 1454
121 Ga0373929_0003532 3300035085 Bacteria 2810
122 Ga0373932_0000001 3300035112 Bacteria 1459067
123 Ga0373954_0044114 3300035118 Bacteria 2080
124 Ga0373962_0000055 3300035242 Bacteria 25343
125 Ga0316574_0083916 3300035398 Unclassified 2026
126 Ga0373931_0000004 3300035691 Bacteria 535140
127 Ga0373927_0019320 3300035695 Bacteria 4469
128 Ga0373927_0022517 3300035695 Bacteria 4127
129 Ga0373927_0023879 3300035695 Bacteria 4000
130 Ga0373933_0125863 3300035724 Bacteria 1608
131 Ga0373925_0001871 3300037068 Bacteria 17487
132 Ga0373925_0006780 3300037068 Bacteria 8394
133 Ga0373925_0013365 3300037068 Bacteria 5941
134 Ga0373925_0027441 3300037068 Bacteria 4168
135 Ga0451807_1841154 3300041486 Unclassified 1379
136 Ga0451577_0003823 3300042876 Bacteria 16391
137 Ga0451577_0010547 3300042876 Bacteria 8813
138 Ga0451577_0062808 3300042876 Bacteria 3312
139 Ga0451577_0278324 3300042876 Bacteria 1516
140 Ga0453684_0002436 3300044712 Bacteria 45223
141 Ga0453684_0046853 3300044712 Bacteria 5743
142 Ga0453684_0640897 3300044712 Bacteria 1160
143 Ga0451576_0068683 3300045051 Bacteria 3688
144 Ga0451576_0200052 3300045051 Unclassified 2087
145 Ga0451576_0231418 3300045051 Bacteria 1930
146 Ga0451576_0348062 3300045051 Bacteria 1552
147 Ga0495592_0000243 3300046454 Bacteria 46498
148 Ga0495592_0068650 3300046454 Unclassified 2587
149 Ga0495651_0114664 3300046462 Unclassified 1988
150 Ga0495664_0024801 3300046477 Unclassified 3487
151 Ga0495618_0091071 3300046514 Unclassified 1949
152 Ga0495628_0000588 3300046516 Bacteria 33447
153 Ga0495628_0064596 3300046516 Bacteria 2865
154 Ga0495628_0312829 3300046516 Unclassified 1160
155 Ga0495630_0000049 3300046517 Bacteria 97884
156 Ga0495630_0000635 3300046517 Bacteria 25422
157 Ga0495630_0092962 3300046517 Unclassified 2280
158 Ga0495666_0027002 3300046526 Bacteria 2826
159 Ga0495652_0007558 3300046529 Bacteria 10017
160 Ga0495652_0241982 3300046529 Unclassified 1342
161 Ga0495586_0000034 3300046535 Bacteria 89391
162 Ga0495586_0000249 3300046535 Bacteria 35735
163 Ga0495586_0002155 3300046535 Bacteria 10692
164 Ga0495586_0028715 3300046535 Bacteria 2976
165 Ga0495586_0130678 3300046535 Bacteria 1406
166 Ga0495587_0065321 3300046536 Unclassified 2125
167 Ga0495645_0033386 3300046543 Bacteria 3755
168 Ga0495634_0006787 3300046642 Bacteria 8670
169 Ga0495634_0036755 3300046642 Unclassified 3348
170 Ga0495599_0017566 3300046678 Bacteria 4447
171 Ga0495599_0017844 3300046678 Bacteria 4417
172 Ga0495624_0005167 3300046690 Bacteria 9431
173 Ga0495604_0138084 3300047317 Bacteria 1745
174 Ga0495674_0000175 3300047319 Bacteria 50197
175 Ga0495674_0015104 3300047319 Bacteria 7224
176 Ga0495674_0247902 3300047319 Unclassified 1466
177 Ga0495676_0000810 3300047321 Bacteria 26161
178 Ga0495684_0106356 3300047471 Bacteria 2120
179 Ga0496115_0011779 3300048918 Bacteria 6567
180 Ga0501032_0038152 3300049569 Unclassified 3273
181 Ga0501033_0009652 3300049570 Bacteria 7424
182 Ga0501033_0020808 3300049570 Bacteria 4953
183 Ga0501034_0391843 3300049571 Bacteria 1313
184 Ga0501036_0328038 3300049572 Bacteria 1279
185 Ga0501037_0094781 3300049573 Bacteria 2158
186 Ga0501043_0159357 3300049579 Bacteria 1764
187 Ga0501035_0010654 3300049822 Bacteria 8514
188 Ga0501044_0000158 3300049823 Bacteria 83865
189 Ga0501044_0141284 3300049823 Bacteria 2396
190 nmdc:mga08y16_133333_c1 3300050511 Bacteria 2582
191 nmdc:mga08y16_155514_c1 3300050511 Bacteria 2376
192 nmdc:mga08y16_469714_c1 3300050511 Bacteria 1281
193 Ga0097621_100167408
194 rootH1_10142208
195 Ga0065712_10085431
196 Ga0070658_10053993
197 Ga0070690_100000421
198 Ga0070690_100121598
199 Ga0070689_100105120
200 Ga0070691_10113546
201 Ga0070673_100419599
202 Ga0070688_100019109
203 Ga0070688_100119801
204 Ga0070714_100021130
205 Ga0070714_100205111
206 Ga0070701_10017175
207 Ga0070694_100006406
208 Ga0070681_10050584
209 Ga0070681_10074433
210 Ga0070685_10107750
211 Ga0070685_10150963
212 Ga0070707_100613654
213 Ga0070679_100046329
214 Ga0070679_100270287
215 Ga0070686_100310836
216 Ga0070704_100214219
217 Ga0068855_100017764
218 Ga0068855_100027658
219 Ga0068855_100067051
220 Ga0068855_100087496
221 Ga0068856_100090144
222 Ga0068856_100292248
223 Ga0070702_100164926
224 Ga0068859_100083861
225 Ga0068859_100319595
226 Ga0068863_100022439
227 Ga0068858_100205945
228 Ga0070712_100133100
229 Ga0070712_100205476
230 Ga0068871_100085543
231 Ga0075428_100005589
232 Ga0075430_100044210
233 Ga0075429_100355373
234 Ga0097620_100014705
235 Ga0097620_100083867
236 Ga0097620_100319595
237 Ga0099794_10111013
238 Ga0105240_10032304
239 Ga0105240_10209720
240 Ga0105240_10263115
241 Ga0111539_10126327
242 Ga0111539_10131995
243 Ga0111539_10193017
244 Ga0111539_10491838
245 Ga0111539_10503535
246 Ga0111539_10511576
247 Ga0105245_10695436
248 Ga0114129_10520372
249 Ga0105237_10234276
250 Ga0105238_10004148
251 Ga0105238_10020515
252 Ga0105249_10104651
253 Ga0157370_10131187
254 Ga0157370_10261520
255 Ga0157374_10169913
256 Ga0157375_10000111
257 Ga0163163_10000010
258 Ga0163163_10230418
259 Ga0157376_10040103
260 Ga0207705_10290219
261 Ga0207707_10046018
262 Ga0207663_10000677
263 Ga0207652_10069382
264 Ga0207694_10007050
265 Ga0207694_10011488
266 Ga0207664_10074945
267 Ga0207664_10193777
268 Ga0207686_10190513
269 Ga0207670_10014680
270 Ga0207670_10023483
271 Ga0207670_10066273
272 Ga0207667_10020570
273 Ga0207667_10173424
274 Ga0207651_10236362
275 Ga0207712_10035669
276 Ga0207703_10313799
277 Ga0207702_10003341
278 Ga0207641_10025745
279 Ga0207674_10095118
280 Ga0265337_1000067
281 Ga0265334_10011116
282 Ga0265322_10005143
283 Ga0265336_10010027
284 Ga0265336_10031087
285 Ga0265336_10043390
286 Ga0265338_10000242
287 Ga0265338_10004798
288 Ga0265338_10014394
289 Ga0265338_10014624
290 Ga0265338_10039477
291 Ga0265338_10051691
292 Ga0265338_10055423
293 Ga0265338_10086233
294 Ga0265338_10105737
295 Ga0265338_10125354
296 Ga0265338_10137617
297 Ga0265324_10007234
298 Ga0265324_10010926
299 Ga0265320_10002454
300 Ga0265320_10028141
301 Ga0265325_10060982
302 Ga0265327_10001384
303 Ga0265327_10041884
304 Ga0265316_10019328
305 Ga0265316_10047563
306 Ga0265316_10164988
307 Ga0265316_10200527
308 Ga0307509_10270604
309 Ga0265314_10021999
310 Ga0265314_10045409
311 Ga0316576_10196233
312 Ga0316580_10039701
313 Ga0373929_0003532
314 Ga0373932_0000001
315 Ga0373954_0044114
316 Ga0373962_0000055
317 Ga0316574_0083916
318 Ga0373931_0000004
319 Ga0373927_0019320
320 Ga0373927_0022517
321 Ga0373927_0023879
322 Ga0373933_0125863
323 Ga0373925_0001871
324 Ga0373925_0006780
325 Ga0373925_0013365
326 Ga0373925_0027441
327 Ga0451807_1841154
328 Ga0451577_0003823
329 Ga0451577_0010547
330 Ga0451577_0062808
331 Ga0451577_0278324
332 Ga0453684_0002436
333 Ga0453684_0046853
334 Ga0453684_0640897
335 Ga0451576_0068683
336 Ga0451576_0200052
337 Ga0451576_0231418
338 Ga0451576_0348062
339 Ga0495592_0000243
340 Ga0495592_0068650
341 Ga0495651_0114664
342 Ga0495664_0024801
343 Ga0495618_0091071
344 Ga0495628_0000588
345 Ga0495628_0064596
346 Ga0495628_0312829
347 Ga0495630_0000049
348 Ga0495630_0000635
349 Ga0495630_0092962
350 Ga0495666_0027002
351 Ga0495652_0007558
352 Ga0495652_0241982
353 Ga0495586_0000034
354 Ga0495586_0000249
355 Ga0495586_0002155
356 Ga0495586_0028715
357 Ga0495586_0130678
358 Ga0495587_0065321
359 Ga0495645_0033386
360 Ga0495634_0006787
361 Ga0495634_0036755
362 Ga0495599_0017566
363 Ga0495599_0017844
364 Ga0495624_0005167
365 Ga0495604_0138084
366 Ga0495674_0000175
367 Ga0495674_0015104
368 Ga0495674_0247902
369 Ga0495676_0000810
370 Ga0495684_0106356
371 Ga0496115_0011779
372 Ga0501032_0038152
373 Ga0501033_0009652
374 Ga0501033_0020808
375 Ga0501034_0391843
376 Ga0501036_0328038
377 Ga0501037_0094781
378 Ga0501043_0159357
379 Ga0501035_0010654
380 Ga0501044_0000158
381 Ga0501044_0141284
382 nmdc:mga08y16_133333_c1
383 nmdc:mga08y16_155514_c1
384 nmdc:mga08y16_469714_c1

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
7qba-assembly1.cif.gz_E cryoem structure of the abc transporter nosdfy complexed with nitrous oxide reductase nosz 0.7264 3 317
7qba-assembly1.cif.gz_E cryoem structure of the abc transporter nosdfy complexed with nitrous oxide reductase nosz 0.7201 3 317
7znq-assembly1.cif.gz_y abc transporter complex nosdfyl in gdn 0.7001 3 315
7znq-assembly1.cif.gz_y abc transporter complex nosdfyl in gdn 0.6877 3 315
7o17-assembly1.cif.gz_E abc transporter nosdfy e154q, atp-bound in lipid nanodisc 0.6769 3 315
ID Description Score Start End Superfamily
af_Q9VMM9_322_706_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.6474 48 312 3.40.1710.10
af_A0A2R8QMX4_332_689_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.6342 50 313 3.40.1710.10
af_Q9VMM9_322_706_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.4195 48 312 3.40.1710.10
1u4qB01 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1; 0.4173 203 315 1.20.58.60
af_A0A2R8QMX4_332_689_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.4133 50 313 3.40.1710.10
ID Description Score Start End GO Terms
AF-A0A7V3QFM2-F1-model_v4 ABC transporter permease 0.9613 2 320 GO:0016020
AF-A0A354FHH0-F1-model_v4 ABC transporter permease 0.9598 14 294 GO:0016020
AF-A0A7V3QFM2-F1-model_v4 ABC transporter permease 0.9553 2 320 GO:0016020
AF-A0A2V6PJ13-F1-model_v4 EF-hand domain-containing protein 0.9541 43 320 GO:0016020
AF-A0A2E7VGX2-F1-model_v4 ABC transporter permease 0.9537 2 320 GO:0016020

Map