F295020
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 192 | 160 | 384 | 510 |
Family's Representative Sequence
| Representative Sequence | 3300005293|Ga0065715_10007254|Ga0065715_100072542 |
| Length | 543 |
| Sequence | MNTTSSNVITHDSHVDRRTKRSGAEDPSLRAPDGAPLAPPCVMVIFGAGGDLTKRLVVPALYNLVGARRLPDEFRIVGVDLASKTTEEWRTGLTDTMQGFVGSDAEFAVDHIDQNAWQWLTDRMGYLQGDLTDAEMYRRLDAHLTELDKTAGAAGNRLFYLAIADRFFSVAVAGLAAAGLGTERDGQWRRVVIEKPFGHDLNSAKALNAEILKHLQEHQIYRIDHFLGKETVQNIMALRFANGLFEPMWNREHIDHVQITAAETVGVEQRGKFYEKTGALRDMVPNHVFQLVSMTAMEPPISFDADAVRAKKAEVIEAIRPLDPAQALKNAVRGQYDAGTVSGKTVRAYRQEPDVAPDSNTETYIACKLQVDNWRWAGVPFYLRTGKYLKRRVTEIAIRFHQAPFTLFRDTDVERMHPNWMILRIQPSEGIGLEFAAKRPGPVVKLSNVTMDFAYEDYFKTAPNTGYETLIYDCMIGDATLFQRADNIEAGWAAVQPILDLWADNRPSFFPNYTAGSNGPVAADELLARDGRAWRSLDLTNNR |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300005293 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 2 | 3300001979 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 | Metagenome | Rhizosphere |
| 3 | 3300005333 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG | Metagenome | Rhizosphere |
| 4 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Metagenome | Rhizosphere |
| 9 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 10 | 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Metagenome | Rhizosphere |
| 12 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 14 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 15 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 16 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 18 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 19 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 21 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 22 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 23 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 24 | 3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 25 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 26 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 27 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 28 | 3300006186 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 | Metagenome | Endosphere |
| 29 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 30 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 31 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 32 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 33 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 34 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 35 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 36 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 37 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 38 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 39 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 40 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 41 | 3300021361 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 | Metagenome | Rhizosphere |
| 42 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 43 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 44 | 3300025893 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300025900 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300025901 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 70 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300028556 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG | Metagenome | Rhizosphere |
| 72 | 3300028563 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG | Metagenome | Rhizosphere |
| 73 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 74 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 75 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 76 | 3300031712 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG | Metagenome | Rhizosphere |
| 77 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 78 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 79 | 3300035111 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 80 | 3300035120 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 | Metagenome | Rhizosphere |
| 81 | 3300035170 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 | Metagenome | Rhizosphere |
| 82 | 3300035172 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 | Metagenome | Rhizosphere |
| 83 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 84 | 3300035725 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 | Metagenome | Rhizosphere |
| 85 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 86 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 87 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 88 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 89 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 90 | 3300039062 | Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 | Metagenome | Unclassified |
| 91 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 92 | 3300039438 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 | Metagenome | Rhizosphere |
| 93 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 94 | 3300039453 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 | Metagenome | Rhizosphere |
| 95 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 96 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 97 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046463 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300046475 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300046492 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300046511 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300046514 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300046531 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300046539 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300046615 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300046664 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300046678 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300046679 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300046680 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300046684 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300047444 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300047673 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere | Metagenome | Rhizosphere |
| 126 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 128 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 129 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 130 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 131 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 132 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 133 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 134 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 135 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 136 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 137 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 138 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 139 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 140 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 141 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 142 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 143 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 144 | 3300053078 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere | Metagenome | Rhizosphere |
| 145 | 3300053084 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere | Metagenome | Rhizosphere |
| 146 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 147 | 3300053093 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere | Metagenome | Endosphere |
| 148 | 3300053096 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere | Metagenome | Endosphere |
| 149 | 2513237098 | Bradyrhizobium elkanii WSM2783 | Isolate | Nodule |
| 150 | 2524023210 | Bradyrhizobium sp. Ai1a-2 | Isolate | Nodule |
| 151 | 2565956521 | Vibrio rhizosphaerae DSM 18581 | Isolate | Rhizosphere |
| 152 | 2648501241 | Vibrio splendidus UCD-SED7 | Isolate | Rhizosphere |
| 153 | 2651869818 | Vibrio splendidus UCD-SED10 | Isolate | Rhizosphere |
| 154 | 2687453341 | Pirellula sp. SH-Sr6A | Isolate | Unclassified |
| 155 | 2876761206 | Bradyrhizobium centrolobii BR 10245 | Isolate | Nodule |
| 156 | 2879110137 | Bradyrhizobium algeriense RST91 | Isolate | Nodule |
| 157 | 2885383462 | Bradyrhizobium sp. Leo170 | Isolate | Unclassified |
| 158 | 2903768456 | Bradyrhizobium sp. Leo121 | Isolate | Unclassified |
| 159 | 2925326138 | Paenibacillus hemerocallicola KCTC 33185 | Isolate | Unclassified |
| 160 | 8056681323 | Bradyrhizobium cenepequi CNPSo 4026 | Isolate | Nodule |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 93.75 |
| Metatranscriptomes | 0 |
| Isolates | 6.25 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 3.12 |
| Nodule | 2.6 |
| Rhizoplane | 3.65 |
| Rhizosphere | 82.81 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0.52 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0065715_10007254 | 3300005293 | Bacteria | 4939 |
| 2 | JGI24740J21852_10011824 | 3300001979 | Bacteria | 3313 |
| 3 | Ga0070677_10020614 | 3300005333 | Bacteria | 2405 |
| 4 | Ga0070661_100117380 | 3300005344 | Bacteria | 1991 |
| 5 | Ga0070668_100125370 | 3300005347 | Bacteria | 2056 |
| 6 | Ga0070669_100037714 | 3300005353 | Bacteria | 3506 |
| 7 | Ga0070674_100012325 | 3300005356 | Bacteria | 5248 |
| 8 | Ga0070709_10116321 | 3300005434 | Bacteria | 1805 |
| 9 | Ga0070713_100022647 | 3300005436 | Bacteria | 4857 |
| 10 | Ga0070711_100090915 | 3300005439 | Bacteria | 2199 |
| 11 | Ga0070694_100050811 | 3300005444 | Bacteria | 2796 |
| 12 | Ga0070708_100165684 | 3300005445 | Bacteria | 2061 |
| 13 | Ga0070706_100002043 | 3300005467 | Bacteria | 20684 |
| 14 | Ga0070706_100052556 | 3300005467 | Bacteria | 3760 |
| 15 | Ga0070706_100059636 | 3300005467 | Bacteria | 3522 |
| 16 | Ga0070707_100054390 | 3300005468 | Bacteria | 3837 |
| 17 | Ga0070707_100078881 | 3300005468 | Unclassified | 3178 |
| 18 | Ga0070698_100003881 | 3300005471 | Bacteria | 16433 |
| 19 | Ga0070698_100006803 | 3300005471 | Bacteria | 12397 |
| 20 | Ga0070698_100156691 | 3300005471 | Bacteria | 2223 |
| 21 | Ga0070699_100134496 | 3300005518 | Bacteria | 2181 |
| 22 | Ga0070697_100001227 | 3300005536 | Bacteria | 19352 |
| 23 | Ga0070697_100010949 | 3300005536 | Bacteria | 7086 |
| 24 | Ga0068853_100017008 | 3300005539 | Bacteria | 5996 |
| 25 | Ga0070665_100010187 | 3300005548 | Bacteria | 9509 |
| 26 | Ga0070665_100064042 | 3300005548 | Bacteria | 3686 |
| 27 | Ga0068855_100088767 | 3300005563 | Bacteria | 3571 |
| 28 | Ga0068857_100026828 | 3300005577 | Bacteria | 5079 |
| 29 | Ga0068854_100008670 | 3300005578 | Bacteria | 6546 |
| 30 | Ga0081455_10000350 | 3300005937 | Bacteria | 60604 |
| 31 | Ga0081455_10010856 | 3300005937 | Bacteria | 9195 |
| 32 | Ga0081455_10021378 | 3300005937 | Bacteria | 6070 |
| 33 | Ga0081540_1000274 | 3300005983 | Bacteria | 53893 |
| 34 | Ga0081539_10002582 | 3300005985 | Bacteria | 24995 |
| 35 | Ga0070717_10007411 | 3300006028 | Bacteria | 8148 |
| 36 | Ga0070717_10029652 | 3300006028 | Bacteria | 4391 |
| 37 | Ga0070717_10053127 | 3300006028 | Bacteria | 3339 |
| 38 | Ga0075367_10064284 | 3300006178 | Bacteria | 2194 |
| 39 | Ga0075369_10000526 | 3300006186 | Bacteria | 12037 |
| 40 | Ga0075430_100022308 | 3300006846 | Bacteria | 5385 |
| 41 | Ga0075431_100038159 | 3300006847 | Bacteria | 4946 |
| 42 | Ga0075434_100013689 | 3300006871 | Bacteria | 7733 |
| 43 | Ga0111539_10000050 | 3300009094 | Bacteria | 118845 |
| 44 | Ga0105245_10145070 | 3300009098 | Bacteria | 2239 |
| 45 | Ga0105237_10000041 | 3300009545 | Bacteria | 181983 |
| 46 | Ga0105238_10001149 | 3300009551 | Bacteria | 26729 |
| 47 | Ga0105238_10075203 | 3300009551 | Bacteria | 3370 |
| 48 | Ga0157370_10005020 | 3300013104 | Bacteria | 14951 |
| 49 | Ga0157369_10037241 | 3300013105 | Bacteria | 5326 |
| 50 | Ga0157374_10097249 | 3300013296 | Bacteria | 2817 |
| 51 | Ga0157380_10002271 | 3300014326 | Bacteria | 12915 |
| 52 | Ga0157376_10109449 | 3300014969 | Bacteria | 2429 |
| 53 | Ga0213872_10025766 | 3300021361 | Bacteria | 2703 |
| 54 | Ga0213876_10008439 | 3300021384 | Bacteria | 5578 |
| 55 | Ga0209758_1035874 | 3300025297 | Bacteria | 1946 |
| 56 | Ga0207682_10040442 | 3300025893 | Bacteria | 1899 |
| 57 | Ga0207710_10015443 | 3300025900 | Bacteria | 3226 |
| 58 | Ga0207688_10024912 | 3300025901 | Bacteria | 3283 |
| 59 | Ga0207647_10001897 | 3300025904 | Bacteria | 16023 |
| 60 | Ga0207684_10004495 | 3300025910 | Bacteria | 13113 |
| 61 | Ga0207684_10072607 | 3300025910 | Bacteria | 2923 |
| 62 | Ga0207684_10185797 | 3300025910 | Bacteria | 1792 |
| 63 | Ga0207654_10022698 | 3300025911 | Bacteria | 3352 |
| 64 | Ga0207695_10005212 | 3300025913 | Bacteria | 17381 |
| 65 | Ga0207671_10000005 | 3300025914 | Bacteria | 844816 |
| 66 | Ga0207671_10095866 | 3300025914 | Bacteria | 2241 |
| 67 | Ga0207693_10002961 | 3300025915 | Bacteria | 14698 |
| 68 | Ga0207660_10027582 | 3300025917 | Bacteria | 3877 |
| 69 | Ga0207649_10026643 | 3300025920 | Bacteria | 3384 |
| 70 | Ga0207646_10016706 | 3300025922 | Bacteria | 6884 |
| 71 | Ga0207646_10057137 | 3300025922 | Bacteria | 3486 |
| 72 | Ga0207681_10128474 | 3300025923 | Bacteria | 1870 |
| 73 | Ga0207694_10011848 | 3300025924 | Bacteria | 6578 |
| 74 | Ga0207659_10159799 | 3300025926 | Bacteria | 1768 |
| 75 | Ga0207700_10039130 | 3300025928 | Bacteria | 3448 |
| 76 | Ga0207644_10119465 | 3300025931 | Bacteria | 2005 |
| 77 | Ga0207679_10023095 | 3300025945 | Bacteria | 4247 |
| 78 | Ga0207667_10049437 | 3300025949 | Bacteria | 4440 |
| 79 | Ga0207668_10053894 | 3300025972 | Bacteria | 2789 |
| 80 | Ga0207658_10074985 | 3300025986 | Bacteria | 2572 |
| 81 | Ga0207658_10144666 | 3300025986 | Bacteria | 1929 |
| 82 | Ga0207703_10052514 | 3300026035 | Bacteria | 3310 |
| 83 | Ga0207639_10109943 | 3300026041 | Bacteria | 2244 |
| 84 | Ga0207639_10157015 | 3300026041 | Bacteria | 1912 |
| 85 | Ga0207678_10097654 | 3300026067 | Bacteria | 2510 |
| 86 | Ga0207702_10000022 | 3300026078 | Bacteria | 192961 |
| 87 | Ga0207428_10000305 | 3300027907 | Bacteria | 65062 |
| 88 | Ga0268266_10007006 | 3300028379 | Bacteria | 10236 |
| 89 | Ga0268266_10171657 | 3300028379 | Bacteria | 1968 |
| 90 | Ga0265337_1004326 | 3300028556 | Bacteria | 5917 |
| 91 | Ga0265319_1000015 | 3300028563 | Bacteria | 176382 |
| 92 | Ga0265338_10001183 | 3300028800 | Bacteria | 43061 |
| 93 | Ga0307509_10163932 | 3300031507 | Bacteria | 2115 |
| 94 | Ga0265314_10002276 | 3300031711 | Bacteria | 19887 |
| 95 | Ga0265314_10030660 | 3300031711 | Bacteria | 3978 |
| 96 | Ga0265342_10010854 | 3300031712 | Bacteria | 6269 |
| 97 | Ga0307413_10098238 | 3300031824 | Bacteria | 1927 |
| 98 | Ga0307510_10005757 | 3300033180 | Bacteria | 14771 |
| 99 | Ga0373923_0011847 | 3300035111 | Bacteria | 3210 |
| 100 | Ga0373923_0018896 | 3300035111 | Bacteria | 2661 |
| 101 | Ga0373957_0052183 | 3300035120 | Bacteria | 1566 |
| 102 | Ga0373943_0006798 | 3300035170 | Bacteria | 5134 |
| 103 | Ga0373955_0027520 | 3300035172 | Bacteria | 2940 |
| 104 | Ga0373935_0046750 | 3300035692 | Bacteria | 2735 |
| 105 | Ga0373947_0024056 | 3300035725 | Bacteria | 3547 |
| 106 | Ga0373925_0063994 | 3300037068 | Bacteria | 2768 |
| 107 | Ga0395900_0026854 | 3300037418 | Bacteria | 5892 |
| 108 | Ga0395905_0097119 | 3300037471 | Bacteria | 2766 |
| 109 | Ga0436364_1443067 | 3300037853 | Bacteria | 1983 |
| 110 | Ga0395901_0000501 | 3300038443 | Bacteria | 45370 |
| 111 | Ga0400483_002788 | 3300039062 | Bacteria | 9223 |
| 112 | Ga0400483_263239 | 3300039062 | Bacteria | 12635 |
| 113 | Ga0436365_0347909 | 3300039437 | Bacteria | 41063 |
| 114 | Ga0436365_1220866 | 3300039437 | Bacteria | 4508 |
| 115 | Ga0436360_0034137 | 3300039438 | Bacteria | 1978 |
| 116 | Ga0436360_1238967 | 3300039438 | Bacteria | 1743 |
| 117 | Ga0436360_1272745 | 3300039438 | Bacteria | 2937 |
| 118 | Ga0436361_0063269 | 3300039447 | Bacteria | 4846 |
| 119 | Ga0436361_0547259 | 3300039447 | Bacteria | 6194 |
| 120 | Ga0436362_0904691 | 3300039453 | Bacteria | 2773 |
| 121 | Ga0436362_1203062 | 3300039453 | Bacteria | 1750 |
| 122 | Ga0466963_0016048 | 3300044694 | Bacteria | 4651 |
| 123 | Ga0466967_0056486 | 3300045976 | Bacteria | 3462 |
| 124 | Ga0495592_0062436 | 3300046454 | Bacteria | 2735 |
| 125 | Ga0495629_0001636 | 3300046459 | Bacteria | 17607 |
| 126 | Ga0495651_0000860 | 3300046462 | Bacteria | 23547 |
| 127 | Ga0495651_0019872 | 3300046462 | Bacteria | 5209 |
| 128 | Ga0495653_0002396 | 3300046463 | Bacteria | 14921 |
| 129 | Ga0495639_0048437 | 3300046475 | Bacteria | 1927 |
| 130 | Ga0495585_0034591 | 3300046492 | Bacteria | 2857 |
| 131 | Ga0495608_0002790 | 3300046511 | Bacteria | 12541 |
| 132 | Ga0495618_0083225 | 3300046514 | Bacteria | 2044 |
| 133 | Ga0495628_0009624 | 3300046516 | Bacteria | 8246 |
| 134 | Ga0495652_0165675 | 3300046529 | Bacteria | 1711 |
| 135 | Ga0495665_0060543 | 3300046531 | Bacteria | 1999 |
| 136 | Ga0495640_0033311 | 3300046533 | Bacteria | 3661 |
| 137 | Ga0495587_0005187 | 3300046536 | Bacteria | 8514 |
| 138 | Ga0495621_0032242 | 3300046539 | Bacteria | 1800 |
| 139 | Ga0495667_0001836 | 3300046559 | Bacteria | 14089 |
| 140 | Ga0495656_0001572 | 3300046615 | Bacteria | 7479 |
| 141 | Ga0495635_0008770 | 3300046663 | Bacteria | 7060 |
| 142 | Ga0495659_0006476 | 3300046664 | Bacteria | 3697 |
| 143 | Ga0495657_0008780 | 3300046675 | Bacteria | 7705 |
| 144 | Ga0495599_0004247 | 3300046678 | Bacteria | 8464 |
| 145 | Ga0495623_0002702 | 3300046679 | Bacteria | 11722 |
| 146 | Ga0495646_0003305 | 3300046680 | Bacteria | 10032 |
| 147 | Ga0495669_0023890 | 3300046684 | Bacteria | 2663 |
| 148 | Ga0495604_0001315 | 3300047317 | Bacteria | 20297 |
| 149 | Ga0495604_0051453 | 3300047317 | Bacteria | 3193 |
| 150 | Ga0495674_0000145 | 3300047319 | Bacteria | 54755 |
| 151 | Ga0495680_0003388 | 3300047322 | Bacteria | 15738 |
| 152 | Ga0495675_0003692 | 3300047444 | Bacteria | 9253 |
| 153 | Ga0495684_0009231 | 3300047471 | Bacteria | 7616 |
| 154 | Ga0495593_0041836 | 3300047673 | Bacteria | 2462 |
| 155 | Ga0495602_0010058 | 3300048088 | Bacteria | 9819 |
| 156 | Ga0496101_0055600 | 3300048904 | Bacteria | 2859 |
| 157 | Ga0496104_0083408 | 3300048907 | Bacteria | 3048 |
| 158 | Ga0496105_0258014 | 3300048908 | Bacteria | 1410 |
| 159 | Ga0496108_0052669 | 3300048911 | Bacteria | 3412 |
| 160 | Ga0496109_0031980 | 3300048912 | Bacteria | 4727 |
| 161 | Ga0496112_0002667 | 3300048915 | Bacteria | 14423 |
| 162 | Ga0496114_0076981 | 3300048917 | Bacteria | 2812 |
| 163 | Ga0496125_0002471 | 3300048928 | Bacteria | 23978 |
| 164 | Ga0496126_0001863 | 3300048929 | Bacteria | 30707 |
| 165 | Ga0496126_0106384 | 3300048929 | Bacteria | 2448 |
| 166 | Ga0501034_0001227 | 3300049571 | Bacteria | 35051 |
| 167 | Ga0501034_0008971 | 3300049571 | Bacteria | 10506 |
| 168 | Ga0501037_0106703 | 3300049573 | Bacteria | 2019 |
| 169 | Ga0501068_0012350 | 3300049584 | Bacteria | 4840 |
| 170 | Ga0501044_0064732 | 3300049823 | Bacteria | 3731 |
| 171 | nmdc:mga0k408_70448_c1 | 3300050493 | Bacteria | 1655 |
| 172 | nmdc:mga08y16_33_c1 | 3300050511 | Bacteria | 172528 |
| 173 | nmdc:mga0a205_174576_c1 | 3300050515 | Bacteria | 2044 |
| 174 | Ga0495601_0000947 | 3300053077 | Bacteria | 15805 |
| 175 | Ga0495601_0019890 | 3300053077 | Bacteria | 4098 |
| 176 | Ga0495612_0011202 | 3300053078 | Bacteria | 3619 |
| 177 | Ga0495595_0001078 | 3300053084 | Bacteria | 10554 |
| 178 | Ga0495619_0004219 | 3300053085 | Bacteria | 9168 |
| 179 | Ga0500651_0031870 | 3300053093 | Bacteria | 3321 |
| 180 | Ga0500641_0025762 | 3300053096 | Bacteria | 2278 |
| 181 | 2513676693 | 2513237098 | Bacteria | 9902361 |
| 182 | 2524466588 | 2524023210 | Bacteria | 9029266 |
| 183 | 2566035835 | 2565956521 | Bacteria | 4468993 |
| 184 | 2649121749 | 2648501241 | Bacteria | 5312320 |
| 185 | 2652975211 | 2651869818 | Bacteria | 5864031 |
| 186 | 2688392804 | 2687453341 | Bacteria | 6534136 |
| 187 | 2876765040 | 2876761206 | Bacteria | 10111113 |
| 188 | 2879111034 | 2879110137 | Bacteria | 8907982 |
| 189 | 2885389727 | 2885383462 | Bacteria | 9473874 |
| 190 | 2903769759 | 2903768456 | Bacteria | 9749579 |
| 191 | 2925329740 | 2925326138 | Bacteria | 9652120 |
| 192 | 8056689675 | 8056681323 | Bacteria | 8472857 |
| 193 | Ga0065715_10007254 | |||
| 194 | JGI24740J21852_10011824 | |||
| 195 | Ga0070677_10020614 | |||
| 196 | Ga0070661_100117380 | |||
| 197 | Ga0070668_100125370 | |||
| 198 | Ga0070669_100037714 | |||
| 199 | Ga0070674_100012325 | |||
| 200 | Ga0070709_10116321 | |||
| 201 | Ga0070713_100022647 | |||
| 202 | Ga0070711_100090915 | |||
| 203 | Ga0070694_100050811 | |||
| 204 | Ga0070708_100165684 | |||
| 205 | Ga0070706_100002043 | |||
| 206 | Ga0070706_100052556 | |||
| 207 | Ga0070706_100059636 | |||
| 208 | Ga0070707_100054390 | |||
| 209 | Ga0070707_100078881 | |||
| 210 | Ga0070698_100003881 | |||
| 211 | Ga0070698_100006803 | |||
| 212 | Ga0070698_100156691 | |||
| 213 | Ga0070699_100134496 | |||
| 214 | Ga0070697_100001227 | |||
| 215 | Ga0070697_100010949 | |||
| 216 | Ga0068853_100017008 | |||
| 217 | Ga0070665_100010187 | |||
| 218 | Ga0070665_100064042 | |||
| 219 | Ga0068855_100088767 | |||
| 220 | Ga0068857_100026828 | |||
| 221 | Ga0068854_100008670 | |||
| 222 | Ga0081455_10000350 | |||
| 223 | Ga0081455_10010856 | |||
| 224 | Ga0081455_10021378 | |||
| 225 | Ga0081540_1000274 | |||
| 226 | Ga0081539_10002582 | |||
| 227 | Ga0070717_10007411 | |||
| 228 | Ga0070717_10029652 | |||
| 229 | Ga0070717_10053127 | |||
| 230 | Ga0075367_10064284 | |||
| 231 | Ga0075369_10000526 | |||
| 232 | Ga0075430_100022308 | |||
| 233 | Ga0075431_100038159 | |||
| 234 | Ga0075434_100013689 | |||
| 235 | Ga0111539_10000050 | |||
| 236 | Ga0105245_10145070 | |||
| 237 | Ga0105237_10000041 | |||
| 238 | Ga0105238_10001149 | |||
| 239 | Ga0105238_10075203 | |||
| 240 | Ga0157370_10005020 | |||
| 241 | Ga0157369_10037241 | |||
| 242 | Ga0157374_10097249 | |||
| 243 | Ga0157380_10002271 | |||
| 244 | Ga0157376_10109449 | |||
| 245 | Ga0213872_10025766 | |||
| 246 | Ga0213876_10008439 | |||
| 247 | Ga0209758_1035874 | |||
| 248 | Ga0207682_10040442 | |||
| 249 | Ga0207710_10015443 | |||
| 250 | Ga0207688_10024912 | |||
| 251 | Ga0207647_10001897 | |||
| 252 | Ga0207684_10004495 | |||
| 253 | Ga0207684_10072607 | |||
| 254 | Ga0207684_10185797 | |||
| 255 | Ga0207654_10022698 | |||
| 256 | Ga0207695_10005212 | |||
| 257 | Ga0207671_10000005 | |||
| 258 | Ga0207671_10095866 | |||
| 259 | Ga0207693_10002961 | |||
| 260 | Ga0207660_10027582 | |||
| 261 | Ga0207649_10026643 | |||
| 262 | Ga0207646_10016706 | |||
| 263 | Ga0207646_10057137 | |||
| 264 | Ga0207681_10128474 | |||
| 265 | Ga0207694_10011848 | |||
| 266 | Ga0207659_10159799 | |||
| 267 | Ga0207700_10039130 | |||
| 268 | Ga0207644_10119465 | |||
| 269 | Ga0207679_10023095 | |||
| 270 | Ga0207667_10049437 | |||
| 271 | Ga0207668_10053894 | |||
| 272 | Ga0207658_10074985 | |||
| 273 | Ga0207658_10144666 | |||
| 274 | Ga0207703_10052514 | |||
| 275 | Ga0207639_10109943 | |||
| 276 | Ga0207639_10157015 | |||
| 277 | Ga0207678_10097654 | |||
| 278 | Ga0207702_10000022 | |||
| 279 | Ga0207428_10000305 | |||
| 280 | Ga0268266_10007006 | |||
| 281 | Ga0268266_10171657 | |||
| 282 | Ga0265337_1004326 | |||
| 283 | Ga0265319_1000015 | |||
| 284 | Ga0265338_10001183 | |||
| 285 | Ga0307509_10163932 | |||
| 286 | Ga0265314_10002276 | |||
| 287 | Ga0265314_10030660 | |||
| 288 | Ga0265342_10010854 | |||
| 289 | Ga0307413_10098238 | |||
| 290 | Ga0307510_10005757 | |||
| 291 | Ga0373923_0011847 | |||
| 292 | Ga0373923_0018896 | |||
| 293 | Ga0373957_0052183 | |||
| 294 | Ga0373943_0006798 | |||
| 295 | Ga0373955_0027520 | |||
| 296 | Ga0373935_0046750 | |||
| 297 | Ga0373947_0024056 | |||
| 298 | Ga0373925_0063994 | |||
| 299 | Ga0395900_0026854 | |||
| 300 | Ga0395905_0097119 | |||
| 301 | Ga0436364_1443067 | |||
| 302 | Ga0395901_0000501 | |||
| 303 | Ga0400483_002788 | |||
| 304 | Ga0400483_263239 | |||
| 305 | Ga0436365_0347909 | |||
| 306 | Ga0436365_1220866 | |||
| 307 | Ga0436360_0034137 | |||
| 308 | Ga0436360_1238967 | |||
| 309 | Ga0436360_1272745 | |||
| 310 | Ga0436361_0063269 | |||
| 311 | Ga0436361_0547259 | |||
| 312 | Ga0436362_0904691 | |||
| 313 | Ga0436362_1203062 | |||
| 314 | Ga0466963_0016048 | |||
| 315 | Ga0466967_0056486 | |||
| 316 | Ga0495592_0062436 | |||
| 317 | Ga0495629_0001636 | |||
| 318 | Ga0495651_0000860 | |||
| 319 | Ga0495651_0019872 | |||
| 320 | Ga0495653_0002396 | |||
| 321 | Ga0495639_0048437 | |||
| 322 | Ga0495585_0034591 | |||
| 323 | Ga0495608_0002790 | |||
| 324 | Ga0495618_0083225 | |||
| 325 | Ga0495628_0009624 | |||
| 326 | Ga0495652_0165675 | |||
| 327 | Ga0495665_0060543 | |||
| 328 | Ga0495640_0033311 | |||
| 329 | Ga0495587_0005187 | |||
| 330 | Ga0495621_0032242 | |||
| 331 | Ga0495667_0001836 | |||
| 332 | Ga0495656_0001572 | |||
| 333 | Ga0495635_0008770 | |||
| 334 | Ga0495659_0006476 | |||
| 335 | Ga0495657_0008780 | |||
| 336 | Ga0495599_0004247 | |||
| 337 | Ga0495623_0002702 | |||
| 338 | Ga0495646_0003305 | |||
| 339 | Ga0495669_0023890 | |||
| 340 | Ga0495604_0001315 | |||
| 341 | Ga0495604_0051453 | |||
| 342 | Ga0495674_0000145 | |||
| 343 | Ga0495680_0003388 | |||
| 344 | Ga0495675_0003692 | |||
| 345 | Ga0495684_0009231 | |||
| 346 | Ga0495593_0041836 | |||
| 347 | Ga0495602_0010058 | |||
| 348 | Ga0496101_0055600 | |||
| 349 | Ga0496104_0083408 | |||
| 350 | Ga0496105_0258014 | |||
| 351 | Ga0496108_0052669 | |||
| 352 | Ga0496109_0031980 | |||
| 353 | Ga0496112_0002667 | |||
| 354 | Ga0496114_0076981 | |||
| 355 | Ga0496125_0002471 | |||
| 356 | Ga0496126_0001863 | |||
| 357 | Ga0496126_0106384 | |||
| 358 | Ga0501034_0001227 | |||
| 359 | Ga0501034_0008971 | |||
| 360 | Ga0501037_0106703 | |||
| 361 | Ga0501068_0012350 | |||
| 362 | Ga0501044_0064732 | |||
| 363 | nmdc:mga0k408_70448_c1 | |||
| 364 | nmdc:mga08y16_33_c1 | |||
| 365 | nmdc:mga0a205_174576_c1 | |||
| 366 | Ga0495601_0000947 | |||
| 367 | Ga0495601_0019890 | |||
| 368 | Ga0495612_0011202 | |||
| 369 | Ga0495595_0001078 | |||
| 370 | Ga0495619_0004219 | |||
| 371 | Ga0500651_0031870 | |||
| 372 | Ga0500641_0025762 | |||
| 373 | 2513676693 | |||
| 374 | 2524466588 | |||
| 375 | 2566035835 | |||
| 376 | 2649121749 | |||
| 377 | 2652975211 | |||
| 378 | 2688392804 | |||
| 379 | 2876765040 | |||
| 380 | 2879111034 | |||
| 381 | 2885389727 | |||
| 382 | 2903769759 | |||
| 383 | 2925329740 | |||
| 384 | 8056689675 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1dpg-assembly1.cif.gz_B | glucose 6-phosphate dehydrogenase from leuconostoc mesenteroides | 0.9407 | 9 | 502 |
| 1h93-assembly1.cif.gz_A | active mutant (s215->c) of glucose 6-phosphate dehydrogenase from leuconostoc mesenteroides | 0.9392 | 9 | 502 |
| 5ukw-assembly1.cif.gz_A | crystal structure of human glucose 6-phosphate dehydrogenase mutant (a277c) complexed with g6p | 0.9391 | 11 | 501 |
| 5ukw-assembly1.cif.gz_A | crystal structure of human glucose 6-phosphate dehydrogenase mutant (a277c) complexed with g6p | 0.9352 | 11 | 501 |
| 1dpg-assembly1.cif.gz_B | glucose 6-phosphate dehydrogenase from leuconostoc mesenteroides | 0.9351 | 9 | 502 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P9WN73_204_512_3.40.50.720 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.9607 | 189 | 501 | 3.40.50.720 |
| af_P9WN73_32_206_3.40.50.720 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.9596 | 18 | 191 | 3.40.50.720 |
| af_P9WN73_204_512_3.40.50.720 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.9576 | 189 | 501 | 3.40.50.720 |
| af_Q2FY66_180_491_3.30.360.10 | Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 | 0.9497 | 189 | 502 | 3.30.360.10 |
| af_P9WN73_32_206_3.40.50.720 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.9491 | 18 | 191 | 3.40.50.720 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A2V9L8L6-F1-model_v4 | Glucose-6-phosphate dehydrogenase | 0.9754 | 227 | 368 |
GO:0004345
GO:0005829 GO:0006006 GO:0009051 GO:0050661 |
| AF-A0A3M3WFC8-F1-model_v4 | Glucose-6-phosphate 1-dehydrogenase | 0.9711 | 121 | 504 |
GO:0004345
GO:0005829 GO:0006006 GO:0009051 GO:0050661 |
| AF-X1H6I0-F1-model_v4 | Glucose-6-phosphate dehydrogenase C-terminal domain-containing protein | 0.9702 | 99 | 367 |
GO:0004345
GO:0005829 GO:0006006 GO:0009051 GO:0050661 |
| AF-T1AZ79-F1-model_v4 | Glucose-6-phosphate dehydrogenase (EC 1.1.1.49) | 0.9692 | 174 | 353 |
GO:0004345
GO:0005829 GO:0006006 GO:0009051 GO:0050661 |
| AF-A0A520X8D0-F1-model_v4 | Glucose-6-phosphate 1-dehydrogenase (G6PD) (EC 1.1.1.49) | 0.9687 | 10 | 504 |
GO:0004345
GO:0005829 GO:0006006 GO:0009051 GO:0050661 |