F294885

General Info

Members Datasets Scaffolds Average Seq Length
191 137 146 325

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|8045830549|8045833432
Length 359
Sequence RWSHENIVGEGFVIDDRVVAFPEGATVADILAGGRDAAHAAFGRVHGEAGTPLDSVRLLAPVVPASVRDFVAFEEHVEGVSAGVEGKSHVADEWYEAPTFYFTNPHTILGPDDVLQPPVTERLDFELEVAVVIGASTGSATGEPGSATGEPGSATGEPGSATGEPGSATGEPGSATGWSNLTVEDAASVIFGYTIMNDWSARDLQGREMKVRLGPAKGKDFGTALGPWIVTADELEPYLDADGFLAIRAEVYINGELTGEDLVSNAGWPFPEFVAYASRNSRVVPGDVLGSGTVGNGGCLGELWGRNGGLVPPPLAEGDEVRMVVEGIGELVGVVGAAVPAPVVPPARPRPRLRRREEQ

Samples

Sample ID Description Type Environment
1 2585428157 Microbacterium sp. CF335 Isolate Rhizosphere
2 2643221566 Microbacterium sp. Root166 Isolate Unclassified
3 2643221575 Microbacterium sp. Root61 Isolate Unclassified
4 2643221597 Microbacterium sp. Root180 Isolate Unclassified
5 2643221632 Leifsonia sp. Root112D2 Isolate Unclassified
6 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
7 2773857763 Microbacterium sp. SAI-030 Isolate Unclassified
8 2775506735 Arthrobacter sp. S95 1704 Isolate Unclassified
9 2808606357 Arthrobacter sp. SLBN-122 Isolate Unclassified
10 2808606370 Arthrobacter sp. SLBN-100 Isolate Unclassified
11 2808606372 Agromyces sp. 23-23 Isolate Unclassified
12 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
13 2811994871 Arthrobacter sp. SLBN-179 Isolate Unclassified
14 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
15 2833709550 Microbacterium sp. 3290 Isolate Rhizosphere
16 2857740372 Paenarthrobacter sp. R-74611 Isolate Unclassified
17 2870628048 Microbacterium thalassium DSM 12511 Isolate Rhizosphere
18 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
19 2904497146 Arthrobacter sp. 1276 Isolate Rhizosphere
20 2905926851 Arthrobacter sedimenti MIC A30 Isolate Rhizosphere
21 2906799679 Microbacterium karelineae TRM80801 Isolate Unclassified
22 2910809715 Paenarthrobacter sp. CM16 Isolate Unclassified
23 2919034639 Paenarthrobacter nitroguajacolicus 247 Isolate Rhizosphere
24 2919059106 Arthrobacter sp. 1088 Isolate Rhizosphere
25 2919538618 Paenarthrobacter nitroguajacolicus 3945 Isolate Unclassified
26 2932426870 Paenarthrobacter sp. 4246 Isolate Rhizosphere
27 2939647034 Arthrobacter sp. 2762 Isolate Rhizosphere
28 2939674588 Arthrobacter bambusae 3552 Isolate Rhizosphere
29 2945916053 Arthrobacter ulcerisalmonis W1I2 Isolate Rhizosphere
30 2945920336 Pseudarthrobacter siccitolerans W1I3 Isolate Rhizosphere
31 2945968032 Microbacterium murale W2I7 Isolate Rhizosphere
32 2946037020 Arthrobacter sp. W4I7 Isolate Rhizosphere
33 2946059875 Arthrobacter sp. SLBN-112 Isolate Rhizosphere
34 2946080515 Microbacterium sp. W4I20 Isolate Rhizosphere
35 2953998280 Pseudarthrobacter sp. W1I19 Isolate Rhizosphere
36 2974294766 Microbacterium proteolyticum SORGH_AS 209 Isolate Unclassified
37 2974302888 Pseudarthrobacter sp. SORGH_AS 212 Isolate Unclassified
38 2974324384 Microbacterium sp. SORGH_AS 344 Isolate Unclassified
39 2977264416 Microbacterium testaceum SORGH_AS 594 Isolate Unclassified
40 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
41 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
42 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
43 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
44 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
45 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
46 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
47 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
48 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
49 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
50 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
51 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
52 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
53 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
54 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
55 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
56 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
57 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
58 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
59 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
60 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
61 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
62 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
63 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
64 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
65 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
66 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
67 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
68 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
69 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
87 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
88 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
89 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
90 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
91 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
92 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
93 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
94 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
95 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
96 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
97 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
98 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
99 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
100 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
101 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
102 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
103 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
104 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
105 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
106 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
107 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
108 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
109 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
110 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
111 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
112 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
113 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
114 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
115 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
116 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
117 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
118 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
119 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
120 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
121 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
122 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
123 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
124 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
125 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
126 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
131 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
132 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
133 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
134 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
135 8016254467 Microbacterium sp. SLBN-111 (version 3) Isolate Rhizosphere
136 8045830549 Microbacterium yannicii DSM 23203 Isolate Unclassified
137 8055034563 Leucobacter allii H21R-40 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 76.44
Metatranscriptomes 0
Isolates 23.56

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.19
Nodule 0
Rhizoplane 16.75
Rhizosphere 63.35
Stem 0
Stem Tuber 0
Unclassified 15.71

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070676_10006559 3300005328 Bacteria 6220
2 Ga0070670_100011916 3300005331 Bacteria 7435
3 Ga0070677_10017777 3300005333 Bacteria 2551
4 Ga0070668_100222349 3300005347 Bacteria 1558
5 Ga0070675_100021553 3300005354 Bacteria 5150
6 Ga0070674_100031600 3300005356 Bacteria 3509
7 Ga0070674_100202508 3300005356 Bacteria 1534
8 Ga0070673_100276320 3300005364 Bacteria 1472
9 Ga0070709_10057094 3300005434 Bacteria 2471
10 Ga0070714_100001039 3300005435 Bacteria 19787
11 Ga0070713_100007312 3300005436 Bacteria 7735
12 Ga0070710_10047054 3300005437 Bacteria 2405
13 Ga0070711_100137618 3300005439 Bacteria 1827
14 Ga0070678_100037905 3300005456 Bacteria 3389
15 Ga0075363_100078624 3300006048 Bacteria 1801
16 Ga0075432_10000095 3300006058 Bacteria 18569
17 Ga0075370_10181711 3300006353 Bacteria 1238
18 Ga0105244_10000295 3300009036 Bacteria 48840
19 Ga0105244_10016323 3300009036 Bacteria 4233
20 Ga0105240_10031639 3300009093 Bacteria 6856
21 Ga0105243_10007728 3300009148 Bacteria 8268
22 Ga0105243_10118458 3300009148 Bacteria 2228
23 Ga0105237_10288059 3300009545 Bacteria 1645
24 Ga0105249_10406432 3300009553 Bacteria 1393
25 Ga0105246_10067166 3300011119 Bacteria 2512
26 Ga0157371_10126834 3300013102 Bacteria 1815
27 Ga0157369_10111730 3300013105 Bacteria 2904
28 Ga0157369_10172906 3300013105 Bacteria 2275
29 Ga0163162_10567388 3300013306 Bacteria 1262
30 Ga0157372_10146643 3300013307 Bacteria 2722
31 Ga0157375_10016886 3300013308 Bacteria 6574
32 Ga0157375_10138747 3300013308 Bacteria 2557
33 Ga0157380_10204181 3300014326 Bacteria 1755
34 Ga0163161_10123202 3300017792 Bacteria 1950
35 Ga0209455_1001298 3300025272 Bacteria 11641
36 Ga0207697_10000976 3300025315 Bacteria 16074
37 Ga0207655_1000526 3300025728 Bacteria 48861
38 Ga0207655_1002282 3300025728 Bacteria 15787
39 Ga0207655_1016772 3300025728 Bacteria 3987
40 Ga0207682_10002533 3300025893 Bacteria 8161
41 Ga0207692_10125730 3300025898 Bacteria 1442
42 Ga0207699_10034624 3300025906 Bacteria 2867
43 Ga0207645_10002248 3300025907 Bacteria 15359
44 Ga0207695_10070473 3300025913 Bacteria 3573
45 Ga0207681_10008275 3300025923 Bacteria 6360
46 Ga0207700_10024794 3300025928 Bacteria 4156
47 Ga0207664_10030011 3300025929 Bacteria 4149
48 Ga0207709_10354177 3300025935 Bacteria 1109
49 Ga0207669_10134375 3300025937 Bacteria 1706
50 Ga0207691_10000713 3300025940 Bacteria 32878
51 Ga0207651_10018450 3300025960 Bacteria 4153
52 Ga0207668_10328904 3300025972 Bacteria 1271
53 Ga0207683_10000664 3300026121 Bacteria 31611
54 Ga0207428_10126280 3300027907 Bacteria 1959
55 Ga0307509_10125630 3300031507 Bacteria 2532
56 Ga0307408_100003706 3300031548 Bacteria 10406
57 Ga0307408_100003896 3300031548 Bacteria 10161
58 Ga0307408_100023970 3300031548 Bacteria 4161
59 Ga0307408_100050904 3300031548 Bacteria 2980
60 Ga0307408_100051527 3300031548 Bacteria 2965
61 Ga0307408_100203091 3300031548 Bacteria 1605
62 Ga0307405_10098112 3300031731 Bacteria 1958
63 Ga0307413_10138877 3300031824 Bacteria 1676
64 Ga0307413_10269178 3300031824 Bacteria 1274
65 Ga0307410_10015437 3300031852 Bacteria 4530
66 Ga0307410_10262555 3300031852 Bacteria 1347
67 Ga0307406_10009251 3300031901 Bacteria 5520
68 Ga0307406_10159628 3300031901 Bacteria 1619
69 Ga0307407_10007076 3300031903 Bacteria 5053
70 Ga0307407_10152040 3300031903 Bacteria 1505
71 Ga0307412_10001214 3300031911 Bacteria 14642
72 Ga0307412_10033568 3300031911 Bacteria 3263
73 Ga0307412_10042911 3300031911 Bacteria 2942
74 Ga0307412_10052015 3300031911 Bacteria 2710
75 Ga0307409_100034096 3300031995 Bacteria 3714
76 Ga0307409_100207088 3300031995 Bacteria 1760
77 Ga0307409_100315739 3300031995 Bacteria 1460
78 Ga0307416_100004654 3300032002 Bacteria 8308
79 Ga0307416_100270755 3300032002 Bacteria 1667
80 Ga0307416_100387914 3300032002 Bacteria 1430
81 Ga0307414_10071284 3300032004 Bacteria 2506
82 Ga0307414_10229909 3300032004 Bacteria 1528
83 Ga0307411_10040081 3300032005 Bacteria 2968
84 Ga0395899_0077542 3300037312 Bacteria 2423
85 Ga0395900_0017062 3300037418 Bacteria 7412
86 Ga0395900_0047276 3300037418 Bacteria 4431
87 Ga0395900_0476281 3300037418 Bacteria 1201
88 Ga0395898_0009048 3300037466 Bacteria 10486
89 Ga0395898_0048700 3300037466 Bacteria 4154
90 Ga0395898_0312751 3300037466 Bacteria 1498
91 Ga0395901_0215958 3300038443 Bacteria 2006
92 Ga0395901_0349304 3300038443 Bacteria 1526
93 Ga0495654_0078321 3300046530 Bacteria 1554
94 Ga0495645_0121976 3300046543 Bacteria 1834
95 Ga0495581_0000904 3300047315 Bacteria 15912
96 Ga0496100_0002696 3300048903 Bacteria 9061
97 Ga0496100_0214202 3300048903 Bacteria 1410
98 Ga0496101_0011603 3300048904 Bacteria 5852
99 Ga0496101_0017422 3300048904 Bacteria 4872
100 Ga0496101_0028364 3300048904 Bacteria 3906
101 Ga0496102_0108165 3300048905 Bacteria 2589
102 Ga0496103_0014938 3300048906 Bacteria 4615
103 Ga0496103_0077745 3300048906 Bacteria 2083
104 Ga0496104_0034767 3300048907 Bacteria 4700
105 Ga0496104_0097016 3300048907 Bacteria 2821
106 Ga0496105_0021705 3300048908 Bacteria 5196
107 Ga0496106_0027084 3300048909 Bacteria 4268
108 Ga0496107_0004344 3300048910 Bacteria 9598
109 Ga0496107_0023568 3300048910 Bacteria 4351
110 Ga0496108_0039537 3300048911 Bacteria 3931
111 Ga0496108_0068117 3300048911 Bacteria 3002
112 Ga0496108_0142644 3300048911 Bacteria 2064
113 Ga0496109_0003069 3300048912 Bacteria 13924
114 Ga0496109_0136467 3300048912 Bacteria 2292
115 Ga0496110_0041544 3300048913 Bacteria 4013
116 Ga0496110_0056183 3300048913 Bacteria 3464
117 Ga0496110_0087057 3300048913 Bacteria 2790
118 Ga0496110_0327884 3300048913 Bacteria 1394
119 Ga0496111_0019447 3300048914 Bacteria 4717
120 Ga0496111_0072349 3300048914 Bacteria 2509
121 Ga0496113_0074432 3300048916 Bacteria 2589
122 Ga0496113_0156593 3300048916 Bacteria 1799
123 Ga0496114_0042041 3300048917 Bacteria 3787
124 Ga0496114_0083153 3300048917 Bacteria 2708
125 Ga0496114_0085071 3300048917 Bacteria 2678
126 Ga0496114_0098309 3300048917 Bacteria 2495
127 Ga0496114_0424124 3300048917 Bacteria 1178
128 Ga0496117_0008716 3300048920 Bacteria 9584
129 Ga0496120_0028715 3300048923 Bacteria 3405
130 Ga0496122_0005521 3300048925 Bacteria 15019
131 Ga0496122_0052309 3300048925 Bacteria 3093
132 Ga0496123_0037543 3300048926 Bacteria 3419
133 Ga0496124_0091104 3300048927 Bacteria 2485
134 Ga0496125_0053646 3300048928 Bacteria 3303
135 Ga0501034_0003532 3300049571 Bacteria 17757
136 Ga0501034_0077196 3300049571 Bacteria 3336
137 Ga0501037_0000586 3300049573 Bacteria 28675
138 Ga0501038_0000604 3300049574 Bacteria 31875
139 Ga0501038_0037184 3300049574 Bacteria 4270
140 Ga0501043_0011411 3300049579 Bacteria 6957
141 Ga0501070_0004639 3300049586 Bacteria 11778
142 nmdc:mga00v17_113276_c1 3300050491 Bacteria 1722
143 nmdc:mga07m45_18584_c2 3300050496 Bacteria 2609
144 Ga0500559_0001052 3300053136 Bacteria 16831
145 Ga0500616_0000090 3300053153 Bacteria 187734
146 Ga0500616_0000295 3300053153 Bacteria 72503

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048923 Ga0496120_0028715 Ga0496120_0028715_2553_3392 278
2 3300025935 Ga0207709_10354177 Ga0207709_103541771 290
3 3300031901 Ga0307406_10009251 Ga0307406_100092514 290
4 3300049574 Ga0501038_0000604 Ga0501038_0000604_27221_28192 294
5 3300049579 Ga0501043_0011411 Ga0501043_0011411_1984_2943 296
6 3300048913 Ga0496110_0327884 Ga0496110_0327884_487_1380 297
7 3300048916 Ga0496113_0156593 Ga0496113_0156593_857_1750 297
8 3300037466 Ga0395898_0312751 Ga0395898_0312751_568_1473 301
9 3300049571 Ga0501034_0003532 Ga0501034_0003532_6385_7389 304
10 3300053153 Ga0500616_0000090 Ga0500616_0000090_53809_54786 307
11 3300046530 Ga0495654_0078321 Ga0495654_0078321_475_1458 310
12 3300053153 Ga0500616_0000295 Ga0500616_0000295_30455_31414 311
13 iso_pu_bacteria 2906799679 2906802416 311
14 3300005356 Ga0070674_100202508 Ga0070674_1002025082 312
15 3300005434 Ga0070709_10057094 Ga0070709_100570942 312
16 3300005435 Ga0070714_100001039 Ga0070714_1000010396 312
17 3300005436 Ga0070713_100007312 Ga0070713_1000073126 312
18 3300005437 Ga0070710_10047054 Ga0070710_100470541 312
19 3300005439 Ga0070711_100137618 Ga0070711_1001376182 312
20 3300009036 Ga0105244_10016323 Ga0105244_100163233 312
21 3300013308 Ga0157375_10138747 Ga0157375_101387472 312
22 3300014326 Ga0157380_10204181 Ga0157380_102041812 312
23 3300025728 Ga0207655_1016772 Ga0207655_10167723 312
24 3300025898 Ga0207692_10125730 Ga0207692_101257302 312
25 3300025906 Ga0207699_10034624 Ga0207699_100346242 312
26 3300025928 Ga0207700_10024794 Ga0207700_100247943 312
27 3300025929 Ga0207664_10030011 Ga0207664_100300114 312
28 3300025937 Ga0207669_10134375 Ga0207669_101343752 312
29 3300006048 Ga0075363_100078624 Ga0075363_1000786241 314
30 3300050491 nmdc:mga00v17_113276_c1 nmdc:mga00v17_113276_c1_699_1682 314
31 iso_pu_bacteria 2585428157 2588107343 316
32 iso_pu_bacteria 2811994872 2812324952 316
33 iso_pu_bacteria 2919059106 2919062461 316
34 iso_pu_bacteria 2932426870 2932430621 316
35 iso_pu_bacteria 2939647034 2939647434 316
36 3300049571 Ga0501034_0077196 Ga0501034_0077196_166_1122 317
37 iso_pu_bacteria 2643221575 2643886822 317
38 iso_pu_bacteria 2773857763 2774397750 317
39 iso_pu_bacteria 2808606447 2809226122 317
40 3300031507 Ga0307509_10125630 Ga0307509_101256301 318
41 iso_pu_bacteria 2833709550 2833709746 318
42 iso_pu_bacteria 2974294766 2974295697 318
43 iso_pu_bacteria 2974324384 2974324503 318
44 iso_pu_bacteria 2977264416 2977264806 318
45 iso_pu_bacteria 2895660088 2895660328 319
46 iso_pu_bacteria 2919034639 2919038699 319
47 3300009148 Ga0105243_10118458 Ga0105243_101184582 320
48 3300011119 Ga0105246_10067166 Ga0105246_100671661 320
49 3300053136 Ga0500559_0001052 Ga0500559_0001052_2204_3190 320
50 iso_pu_bacteria 2643221566 2643847623 320
51 iso_pu_bacteria 2643221597 2643996845 320
52 iso_pu_bacteria 2808606372 2808903565 320
53 iso_pu_bacteria 2919538618 2919540538 320
54 iso_pu_bacteria 2946080515 2946082100 320
55 3300031995 Ga0307409_100207088 Ga0307409_1002070882 321
56 3300048911 Ga0496108_0142644 Ga0496108_0142644_247_1218 321
57 3300048913 Ga0496110_0087057 Ga0496110_0087057_1773_2744 321
58 3300048917 Ga0496114_0083153 Ga0496114_0083153_161_1132 321
59 3300048917 Ga0496114_0098309 Ga0496114_0098309_1129_2100 321
60 3300049586 Ga0501070_0004639 Ga0501070_0004639_3405_4373 321
61 iso_pu_bacteria 2919034639 2919035268 321
62 iso_pu_bacteria 8045830549 8045833432 321
63 iso_pu_bacteria 8055034563 8055034747 321
64 3300009036 Ga0105244_10000295 Ga0105244_1000029514 322
65 3300009545 Ga0105237_10288059 Ga0105237_102880592 322
66 3300013105 Ga0157369_10111730 Ga0157369_101117302 322
67 3300013307 Ga0157372_10146643 Ga0157372_101466433 322
68 3300025728 Ga0207655_1000526 Ga0207655_100052637 322
69 3300048904 Ga0496101_0017422 Ga0496101_0017422_1763_2734 322
70 3300048906 Ga0496103_0014938 Ga0496103_0014938_1749_2720 322
71 3300048912 Ga0496109_0136467 Ga0496109_0136467_1051_2022 322
72 3300048913 Ga0496110_0056183 Ga0496110_0056183_734_1705 322
73 3300048916 Ga0496113_0074432 Ga0496113_0074432_1020_1991 322
74 3300048917 Ga0496114_0042041 Ga0496114_0042041_2612_3583 322
75 3300048920 Ga0496117_0008716 Ga0496117_0008716_6209_7180 322
76 3300048925 Ga0496122_0052309 Ga0496122_0052309_326_1297 322
77 3300048926 Ga0496123_0037543 Ga0496123_0037543_61_1032 322
78 3300006353 Ga0075370_10181711 Ga0075370_101817111 323
79 3300037418 Ga0395900_0017062 Ga0395900_0017062_3590_4561 323
80 3300037466 Ga0395898_0009048 Ga0395898_0009048_3001_3972 323
81 3300038443 Ga0395901_0215958 Ga0395901_0215958_909_1880 323
82 3300050496 nmdc:mga07m45_18584_c2 nmdc:mga07m45_18584_c2_1311_2294 323
83 iso_pu_bacteria 2870628048 2870628894 323
84 3300032002 Ga0307416_100387914 Ga0307416_1003879142 324
85 3300049573 Ga0501037_0000586 Ga0501037_0000586_1217_2191 324
86 iso_pu_bacteria 2643221632 2644183243 324
87 iso_pu_bacteria 2643221575 2643887199 325
88 iso_pu_bacteria 2721755702 2723642228 325
89 iso_pu_bacteria 2945968032 2945969010 325
90 iso_pu_bacteria 8016254467 8016255913 325
91 3300009093 Ga0105240_10031639 Ga0105240_100316395 326
92 3300025913 Ga0207695_10070473 Ga0207695_100704732 326
93 3300046543 Ga0495645_0121976 Ga0495645_0121976_601_1608 326
94 3300048917 Ga0496114_0424124 Ga0496114_0424124_143_1144 326
95 3300048925 Ga0496122_0005521 Ga0496122_0005521_3288_4292 326
96 iso_pu_bacteria 2870628048 2870629068 326
97 iso_pu_bacteria 2974302888 2974305222 327
98 iso_pu_bacteria 2775506735 2775656981 328
99 iso_pu_bacteria 2808606357 2808829388 328
100 iso_pu_bacteria 2808606370 2808893664 328
101 iso_pu_bacteria 2811994871 2812318918 328
102 iso_pu_bacteria 2857740372 2857742617 328
103 iso_pu_bacteria 2904497146 2904498421 328
104 iso_pu_bacteria 2905926851 2905929693 328
105 iso_pu_bacteria 2910809715 2910812999 328
106 iso_pu_bacteria 2939674588 2939675159 328
107 iso_pu_bacteria 2945916053 2945916684 328
108 iso_pu_bacteria 2945920336 2945923216 328
109 iso_pu_bacteria 2946037020 2946041069 328
110 iso_pu_bacteria 2946059875 2946060455 328
111 iso_pu_bacteria 2953998280 2954002303 328
112 3300025272 Ga0209455_1001298 Ga0209455_10012983 329
113 3300031911 Ga0307412_10001214 Ga0307412_100012143 330
114 3300032002 Ga0307416_100004654 Ga0307416_1000046544 330
115 3300031903 Ga0307407_10152040 Ga0307407_101520402 331
116 3300005328 Ga0070676_10006559 Ga0070676_100065596 332
117 3300005331 Ga0070670_100011916 Ga0070670_1000119163 332
118 3300005333 Ga0070677_10017777 Ga0070677_100177773 332
119 3300005347 Ga0070668_100222349 Ga0070668_1002223492 332
120 3300005354 Ga0070675_100021553 Ga0070675_1000215533 332
121 3300005356 Ga0070674_100031600 Ga0070674_1000316003 332
122 3300005364 Ga0070673_100276320 Ga0070673_1002763202 332
123 3300005456 Ga0070678_100037905 Ga0070678_1000379053 332
124 3300006058 Ga0075432_10000095 Ga0075432_1000009520 332
125 3300009148 Ga0105243_10007728 Ga0105243_100077282 332
126 3300009553 Ga0105249_10406432 Ga0105249_104064322 332
127 3300013102 Ga0157371_10126834 Ga0157371_101268342 332
128 3300013105 Ga0157369_10172906 Ga0157369_101729062 332
129 3300013306 Ga0163162_10567388 Ga0163162_105673881 332
130 3300013308 Ga0157375_10016886 Ga0157375_100168862 332
131 3300017792 Ga0163161_10123202 Ga0163161_101232022 332
132 3300025315 Ga0207697_10000976 Ga0207697_100009766 332
133 3300025728 Ga0207655_1002282 Ga0207655_10022826 332
134 3300025893 Ga0207682_10002533 Ga0207682_100025338 332
135 3300025907 Ga0207645_10002248 Ga0207645_1000224815 332
136 3300025923 Ga0207681_10008275 Ga0207681_100082756 332
137 3300025940 Ga0207691_10000713 Ga0207691_1000071330 332
138 3300025960 Ga0207651_10018450 Ga0207651_100184503 332
139 3300025972 Ga0207668_10328904 Ga0207668_103289041 332
140 3300026121 Ga0207683_10000664 Ga0207683_1000066414 332
141 3300027907 Ga0207428_10126280 Ga0207428_101262802 332
142 3300031548 Ga0307408_100003706 Ga0307408_1000037064 332
143 3300031548 Ga0307408_100003896 Ga0307408_1000038967 332
144 3300031548 Ga0307408_100023970 Ga0307408_1000239702 332
145 3300031548 Ga0307408_100050904 Ga0307408_1000509042 332
146 3300031548 Ga0307408_100051527 Ga0307408_1000515272 332
147 3300031548 Ga0307408_100203091 Ga0307408_1002030912 332
148 3300031731 Ga0307405_10098112 Ga0307405_100981122 332
149 3300031824 Ga0307413_10138877 Ga0307413_101388772 332
150 3300031824 Ga0307413_10269178 Ga0307413_102691782 332
151 3300031852 Ga0307410_10015437 Ga0307410_100154373 332
152 3300031852 Ga0307410_10262555 Ga0307410_102625552 332
153 3300031901 Ga0307406_10159628 Ga0307406_101596282 332
154 3300031903 Ga0307407_10007076 Ga0307407_100070765 332
155 3300031911 Ga0307412_10033568 Ga0307412_100335683 332
156 3300031911 Ga0307412_10042911 Ga0307412_100429112 332
157 3300031911 Ga0307412_10052015 Ga0307412_100520153 332
158 3300031995 Ga0307409_100034096 Ga0307409_1000340963 332
159 3300031995 Ga0307409_100315739 Ga0307409_1003157392 332
160 3300032002 Ga0307416_100270755 Ga0307416_1002707552 332
161 3300032004 Ga0307414_10071284 Ga0307414_100712843 332
162 3300032004 Ga0307414_10229909 Ga0307414_102299092 332
163 3300032005 Ga0307411_10040081 Ga0307411_100400812 332
164 3300037312 Ga0395899_0077542 Ga0395899_0077542_668_1666 332
165 3300037418 Ga0395900_0047276 Ga0395900_0047276_2548_3546 332
166 3300037418 Ga0395900_0476281 Ga0395900_0476281_174_1172 332
167 3300037466 Ga0395898_0048700 Ga0395898_0048700_2123_3121 332
168 3300038443 Ga0395901_0349304 Ga0395901_0349304_414_1412 332
169 3300047315 Ga0495581_0000904 Ga0495581_0000904_12177_13175 332
170 3300048903 Ga0496100_0002696 Ga0496100_0002696_695_1693 332
171 3300048903 Ga0496100_0214202 Ga0496100_0214202_59_1057 332
172 3300048904 Ga0496101_0011603 Ga0496101_0011603_1076_2074 332
173 3300048904 Ga0496101_0028364 Ga0496101_0028364_1146_2144 332
174 3300048905 Ga0496102_0108165 Ga0496102_0108165_1073_2071 332
175 3300048906 Ga0496103_0077745 Ga0496103_0077745_567_1565 332
176 3300048907 Ga0496104_0034767 Ga0496104_0034767_1341_2339 332
177 3300048907 Ga0496104_0097016 Ga0496104_0097016_1743_2741 332
178 3300048908 Ga0496105_0021705 Ga0496105_0021705_491_1489 332
179 3300048909 Ga0496106_0027084 Ga0496106_0027084_567_1565 332
180 3300048910 Ga0496107_0004344 Ga0496107_0004344_670_1668 332
181 3300048910 Ga0496107_0023568 Ga0496107_0023568_2224_3222 332
182 3300048911 Ga0496108_0039537 Ga0496108_0039537_2160_3158 332
183 3300048911 Ga0496108_0068117 Ga0496108_0068117_1342_2340 332
184 3300048912 Ga0496109_0003069 Ga0496109_0003069_1891_2889 332
185 3300048913 Ga0496110_0041544 Ga0496110_0041544_695_1693 332
186 3300048914 Ga0496111_0019447 Ga0496111_0019447_3601_4599 332
187 3300048914 Ga0496111_0072349 Ga0496111_0072349_1342_2340 332
188 3300048917 Ga0496114_0085071 Ga0496114_0085071_551_1549 332
189 3300048927 Ga0496124_0091104 Ga0496124_0091104_231_1229 332
190 3300048928 Ga0496125_0053646 Ga0496125_0053646_585_1583 332
191 3300049574 Ga0501038_0037184 Ga0501038_0037184_2598_3596 332

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01557

FAA_hydrolase

Fumarylacetoacetate (FAA) hydrolase family

166

336

0.89

PF01557

FAA_hydrolase

Fumarylacetoacetate (FAA) hydrolase family

65

148

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
6j5x-assembly1.cif.gz_B crystal structure of fumarylpyruvate hydrolase from corynebacterium glutamicum in complex with mn2+ and pyruvate 0.8883 3 307
1wzo-assembly1.cif.gz_C crystal structure of the hpce from thermus thermophilus hb8 0.8865 3 306
6sbj-assembly2.cif.gz_C x-ray structure of mus musculus fumarylacetoacetate hydrolase domain containing protein 1 (fahd1) apo-form uuncomplexed 0.8847 70 306
6sbi-assembly2.cif.gz_C x-ray structure of murine fumarylacetoacetate hydrolase domain containing protein 1 (fahd1) in complex with inhibitor oxalate 0.8809 70 306
6j5x-assembly1.cif.gz_B crystal structure of fumarylpyruvate hydrolase from corynebacterium glutamicum in complex with mn2+ and pyruvate 0.8793 3 307
ID Description Score Start End Superfamily
af_O86346_1_303_3.90.850.10 Alpha Beta;Alpha-Beta Complex;Fumarylacetoacetate hydrolase; domain 2;Fumarylacetoacetase-like, C-terminal domain 0.9472 3 306 3.90.850.10
af_O86346_1_303_3.90.850.10 Alpha Beta;Alpha-Beta Complex;Fumarylacetoacetate hydrolase; domain 2;Fumarylacetoacetase-like, C-terminal domain 0.9351 3 306 3.90.850.10
af_A0A0R4IWE1_56_289_3.90.850.10 Alpha Beta;Alpha-Beta Complex;Fumarylacetoacetate hydrolase; domain 2;Fumarylacetoacetase-like, C-terminal domain 0.9005 51 304 3.90.850.10
af_Q9VDE2_1_220_3.90.850.10 Alpha Beta;Alpha-Beta Complex;Fumarylacetoacetate hydrolase; domain 2;Fumarylacetoacetase-like, C-terminal domain 0.8962 70 306 3.90.850.10
af_Q96GK7_51_314_3.90.850.10 Alpha Beta;Alpha-Beta Complex;Fumarylacetoacetate hydrolase; domain 2;Fumarylacetoacetase-like, C-terminal domain 0.8955 26 304 3.90.850.10
ID Description Score Start End GO Terms
AF-A0A2J8IC51-F1-model_v4 Hydroxylase 0.9896 1 141 GO:0003824
AF-A0A2J8IC51-F1-model_v4 Hydroxylase 0.9827 1 141 GO:0003824
AF-A0A177HYH8-F1-model_v4 Ureidoglycolate lyase (EC 4.3.2.3) 0.9585 3 320 GO:0050385
AF-A0A7X0VCG5-F1-model_v4 Fumarylacetoacetate hydrolase family protein 0.9573 3 308 GO:0016787
AF-A0A177HYH8-F1-model_v4 Ureidoglycolate lyase (EC 4.3.2.3) 0.9525 3 320 GO:0050385

Feature Viewer

pLDDT pTM Quality
89.78 0.89 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map