F294250

General Info

Members Datasets Scaffolds Average Seq Length
191 171 382 463

Family's Representative Sequence

Representative Sequence 3300031649|Ga0307514_10085670|Ga0307514_100856701
Length 492
Sequence MTPDTTPTGGAGPTPGASAATRTAAEDAVRALAGARPVPFWLDDPGHRPEPCPALAGDEQCDLLVVGGGYSGLWTALLAKEREPERDVVLIEAKEVGWAASGRNGGFCDSSLTHGLGNGLARWPEEIATLERLGHRNLDAIEEAVERHGIDCDFERTGEIELATQPHQVAELREAAEDAARLGAGEHTLFLDGAAVREQVDSPAFLAGLWNRRGVALLNPARLAWGLKRACTEAGVRIYEHTPAGRLAADARTVSVRTPHGRVRARRAALGTNAFPALLRRVRPYIVPVYDYALMTEPLSEQQRASVGWANRQGLADSANHFHYFRLTADDRILWGGYDVLYHYGNRIAAEYEQRPATFRTLAGHFFDTFPQLSGLRFSHAWGGVIDTCSRFSPFFGTAHGGRVSYAAGYTGLGVGATRFGAEVMLDLLAGERTERTELELVRRKPLPFPPEPVRWAGIGLTQWSLSRADANGGRRNLWLRAMDAAGMGFDS

Samples

Sample ID Description Type Environment
1 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
10 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
11 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
12 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
13 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
14 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
15 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
16 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
17 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
18 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
19 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
20 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
21 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
22 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
23 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
25 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
26 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
27 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
36 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
37 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
38 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
39 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
40 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
41 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
42 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
43 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
44 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
45 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
46 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
47 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
48 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
49 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
50 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
51 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
52 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
53 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
54 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
55 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
56 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
57 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
58 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
59 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
60 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
61 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
62 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
63 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
64 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
65 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
66 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
67 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
68 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
69 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
70 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
71 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
72 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
73 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
74 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
75 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
76 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
77 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
78 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
79 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
80 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
81 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
82 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
83 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
84 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
85 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
86 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
87 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
88 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
89 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
90 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
91 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
92 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
93 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
94 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
95 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
96 3300053099 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 endosphere Metagenome Endosphere
97 3300053100 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 endosphere Metagenome Endosphere
98 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
99 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
100 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
101 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
102 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
103 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
104 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
105 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
106 3300053732 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 endosphere Metagenome Endosphere
107 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere
108 2501939600 Micromonospora sp. L5 Isolate Unclassified
109 2537561592 Arthrobacter crystallopoietes BAB-32 Isolate Rhizosphere
110 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
111 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
112 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
113 2643221548 Streptomyces sp. Root55 Isolate Unclassified
114 2643221578 Streptomyces sp. Root63 Isolate Unclassified
115 2643221670 Streptomyces sp. Root431 Isolate Unclassified
116 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
117 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
118 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
119 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
120 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
121 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
122 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
123 2855683550 Micromonospora sp. RP3T Isolate Unclassified
124 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
125 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
126 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
127 2858868258 Micromonospora sp. MH33 Isolate Unclassified
128 2858882152 Micromonospora noduli MED15 Isolate Nodule
129 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
130 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
131 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
132 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
133 2862993130 Planctomonas deserti 13S1-3 v2 Isolate Rhizosphere
134 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
135 2867369537 Streptomyces sp. Z26 Isolate Unclassified
136 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
137 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
138 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
139 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
140 2870622029 Conyzicola lurida DSM 105784 Isolate Unclassified
141 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
142 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
143 2902582711 Micromonospora sp. AP08 Isolate Unclassified
144 2919446982 Phycicoccus sp. 3266 Isolate Rhizosphere
145 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
146 2928153084 Leifsonia sp. 563 Isolate Unclassified
147 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
148 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
149 2939657138 Conyzicola nivalis 2857 Isolate Rhizosphere
150 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
151 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
152 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
153 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
154 649633069 Micromonospora sp. L5 Isolate Unclassified
155 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
156 8003830390 Micromonospora parastrephiae STR1_7 Isolate Rhizosphere
157 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified
158 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
159 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
160 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
161 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
162 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
163 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
164 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
165 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere
166 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
167 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
168 8054734606 Micromonospora hortensis NIE111 Isolate Nodule
169 8055412473 Micromonospora phytophila DSM 105363 Isolate Nodule
170 8056447290 Streptomyces huiliensis SCA2-4 Isolate Rhizosphere
171 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 66.49
Metatranscriptomes 0
Isolates 33.51

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.42
Nodule 3.14
Rhizoplane 5.76
Rhizosphere 54.97
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307514_10085670 3300031649 Bacteria 2315
2 JGI24740J21852_10016646 3300001979 Bacteria 2650
3 JGI24737J22298_10000785 3300001990 Bacteria 11230
4 JGI24735J21928_10002543 3300002067 Bacteria 6306
5 Ga0068869_100048786 3300005334 Bacteria 3063
6 Ga0070668_100002996 3300005347 Bacteria 12479
7 Ga0070709_10011598 3300005434 Bacteria 4916
8 Ga0070714_100008744 3300005435 Bacteria 7916
9 Ga0070681_10101345 3300005458 Bacteria 2825
10 Ga0070707_100002427 3300005468 Bacteria 17764
11 Ga0070696_100001611 3300005546 Bacteria 14801
12 Ga0068859_100005704 3300005617 Bacteria 12666
13 Ga0070717_10099661 3300006028 Bacteria 2465
14 Ga0075363_100018053 3300006048 Bacteria 3509
15 Ga0075364_10010351 3300006051 Bacteria 5631
16 Ga0075428_100035913 3300006844 Bacteria 5462
17 Ga0075430_100005583 3300006846 Bacteria 10626
18 Ga0075431_100001880 3300006847 Bacteria 19905
19 Ga0075429_100011063 3300006880 Bacteria 7808
20 Ga0097620_100005704 3300006931 Bacteria 12666
21 Ga0105245_10011092 3300009098 Bacteria 7846
22 Ga0105247_10008534 3300009101 Bacteria 6240
23 Ga0114129_10000459 3300009147 Bacteria 48751
24 Ga0114129_10000915 3300009147 Bacteria 38462
25 Ga0105243_10038505 3300009148 Bacteria 3723
26 Ga0163163_10030727 3300014325 Bacteria 5179
27 Ga0213875_10002928 3300021388 Bacteria 9960
28 Ga0207710_10002148 3300025900 Bacteria 9295
29 Ga0207646_10033965 3300025922 Bacteria 4610
30 Ga0207646_10035805 3300025922 Bacteria 4482
31 Ga0207664_10000648 3300025929 Bacteria 24123
32 Ga0207664_10146189 3300025929 Bacteria 2005
33 Ga0207706_10186237 3300025933 Bacteria 1823
34 Ga0207709_10015510 3300025935 Bacteria 4225
35 Ga0207668_10040113 3300025972 Bacteria 3156
36 Ga0207708_10083939 3300026075 Bacteria 2449
37 Ga0207674_10096788 3300026116 Bacteria 2936
38 Ga0307517_10006962 3300028786 Bacteria 16612
39 Ga0307515_10025244 3300028794 Bacteria 10294
40 Ga0307513_10132915 3300031456 Bacteria 2430
41 Ga0307509_10123797 3300031507 Bacteria 2557
42 Ga0307508_10094462 3300031616 Bacteria 2581
43 Ga0307514_10025423 3300031649 Bacteria 4790
44 Ga0316579_10000906 3300031691 Bacteria 10286
45 Ga0307413_10059402 3300031824 Bacteria 2349
46 Ga0307409_100030109 3300031995 Bacteria 3895
47 Ga0307409_100049351 3300031995 Bacteria 3209
48 Ga0316574_0005115 3300035398 Bacteria 6971
49 Ga0373947_0038545 3300035725 Bacteria 2840
50 Ga0436364_0151261 3300037853 Bacteria 9936
51 Ga0436364_0540807 3300037853 Bacteria 3855
52 Ga0436362_0156636 3300039453 Bacteria 1286
53 Ga0439461_0001100 3300041410 Bacteria 4087
54 Ga0466972_0006473 3300044658 Bacteria 5882
55 Ga0466963_0020334 3300044694 Bacteria 4174
56 Ga0466964_0005883 3300044706 Bacteria 4566
57 Ga0466971_0011730 3300044719 Bacteria 3838
58 Ga0466970_0063716 3300044765 Bacteria 1976
59 Ga0466957_0004034 3300044842 Bacteria 8128
60 Ga0466960_0034825 3300044901 Bacteria 2349
61 Ga0466960_0041794 3300044901 Bacteria 2173
62 Ga0466958_0009784 3300045836 Bacteria 5350
63 Ga0466958_0040868 3300045836 Bacteria 2788
64 Ga0466958_0111933 3300045836 Bacteria 1704
65 Ga0466967_0054704 3300045976 Bacteria 3514
66 Ga0495603_0000548 3300046455 Bacteria 20965
67 Ga0495603_0006292 3300046455 Bacteria 7100
68 Ga0495629_0002165 3300046459 Bacteria 15175
69 Ga0495629_0006884 3300046459 Bacteria 8389
70 Ga0495629_0012534 3300046459 Bacteria 6139
71 Ga0495641_0020497 3300046461 Bacteria 3351
72 Ga0495594_0022495 3300046499 Bacteria 3372
73 Ga0495594_0067349 3300046499 Bacteria 1987
74 Ga0495618_0139972 3300046514 Bacteria 1548
75 Ga0495631_0015855 3300046518 Bacteria 3601
76 Ga0495643_0001114 3300046522 Bacteria 26618
77 Ga0495663_0052069 3300046525 Bacteria 1270
78 Ga0495642_0062730 3300046528 Bacteria 1544
79 Ga0495611_0030707 3300046648 Bacteria 2364
80 Ga0495658_0013804 3300046683 Bacteria 4117
81 Ga0495613_0006494 3300046689 Bacteria 8737
82 Ga0495613_0094004 3300046689 Bacteria 2170
83 Ga0495624_0056910 3300046690 Bacteria 2459
84 Ga0495670_0009064 3300046691 Bacteria 4895
85 Ga0495660_0016992 3300046810 Bacteria 4190
86 Ga0495604_0002405 3300047317 Bacteria 14988
87 Ga0495676_0023517 3300047321 Bacteria 5348
88 Ga0495676_0042321 3300047321 Bacteria 3740
89 Ga0495687_025924 3300047443 Bacteria 2764
90 Ga0495681_0001954 3300047470 Bacteria 15086
91 Ga0495686_0064806 3300047472 Bacteria 2261
92 Ga0495614_0001198 3300048089 Bacteria 11145
93 Ga0496101_0073647 3300048904 Bacteria 2509
94 Ga0496102_0000094 3300048905 Bacteria 125159
95 Ga0496102_0087178 3300048905 Bacteria 2884
96 Ga0496103_0000042 3300048906 Bacteria 168701
97 Ga0496103_0023396 3300048906 Bacteria 3725
98 Ga0496105_0025080 3300048908 Bacteria 4849
99 Ga0496107_0050159 3300048910 Bacteria 3008
100 Ga0496109_0011298 3300048912 Bacteria 7669
101 Ga0496112_0009899 3300048915 Bacteria 8620
102 Ga0496114_0020269 3300048917 Bacteria 5395
103 Ga0496117_0055768 3300048920 Bacteria 2758
104 Ga0496118_0007147 3300048921 Bacteria 11953
105 Ga0496121_0030684 3300048924 Bacteria 4932
106 Ga0496126_0100616 3300048929 Bacteria 2529
107 Ga0501042_0033598 3300049578 Bacteria 3636
108 nmdc:mga0yw44_11577_c1 3300050492 Bacteria 4563
109 nmdc:mga05p37_1759_c1 3300050507 Bacteria 25291
110 nmdc:mga05p37_7710_c1 3300050507 Bacteria 12705
111 nmdc:mga09592_14470_c1 3300050508 Bacteria 6441
112 nmdc:mga06r32_76353_c1 3300050510 Bacteria 3254
113 Ga0500646_0000554 3300053090 Bacteria 10786
114 Ga0500654_034675 3300053099 Bacteria 2975
115 Ga0500660_045551 3300053100 Bacteria 2202
116 Ga0500560_016923 3300053107 Bacteria 2001
117 Ga0500569_007130 3300053109 Bacteria 2494
118 Ga0500652_001309 3300053131 Bacteria 7864
119 Ga0500658_0003443 3300053134 Bacteria 5973
120 Ga0500559_0001017 3300053136 Bacteria 17219
121 Ga0500573_0000023 3300053140 Bacteria 152268
122 Ga0500573_0004790 3300053140 Bacteria 7162
123 Ga0500573_0071212 3300053140 Bacteria 1983
124 Ga0500600_0018549 3300053149 Bacteria 4192
125 Ga0500634_0010312 3300053161 Bacteria 4768
126 Ga0500656_003118 3300053732 Bacteria 1533
127 Ga0500587_002848 3300053739 Bacteria 2447
128 2501943245 2501939600 Bacteria 6907073
129 2537900889 2537561592 Bacteria 4348607
130 2585297405 2582581312 Bacteria 7308206
131 2616903738 2616644941 Bacteria 8510691
132 2623586730 2622736626 Bacteria 7181580
133 2643761554 2643221548 Bacteria 8053412
134 2643899336 2643221578 Bacteria 9213798
135 2644387184 2643221670 Bacteria 6497041
136 2644406929 2643221673 Bacteria 9196637
137 2644458744 2643221682 Bacteria 6743283
138 2676480390 2675903059 Bacteria 8644972
139 2811844100 2808606982 Bacteria 7791042
140 2831938690 2831935698 Bacteria 5963223
141 2855671471 2855670206 Bacteria 7120389
142 2855680627 2855676851 Bacteria 7063653
143 2855684861 2855683550 Bacteria 7134265
144 2856860643 2856858025 Bacteria 7255264
145 2857292167 2857288857 Bacteria 7189066
146 2858854550 2858848962 Bacteria 6963058
147 2858875739 2858868258 Bacteria 7683772
148 2858883676 2858882152 Bacteria 7230291
149 2858890483 2858888857 Bacteria 7060307
150 2858901114 2858895516 Bacteria 7378898
151 2858903386 2858902515 Bacteria 7086037
152 2862290782 2862290372 Bacteria 7471434
153 2862996143 2862993130 Bacteria 3860849
154 2867304078 2867302475 Bacteria 7087181
155 2867374111 2867369537 Bacteria 6501581
156 2867509589 2867507094 Bacteria 6506033
157 2869048578 2869048445 Bacteria 6875584
158 2869068353 2869061728 Bacteria 7112407
159 2869070391 2869068681 Bacteria 7205615
160 2870623981 2870622029 Bacteria 3643329
161 2880493466 2880489317 Bacteria 7096270
162 2880498842 2880495981 Bacteria 7340502
163 2902585608 2902582711 Bacteria 6187705
164 2919448802 2919446982 Bacteria 3994487
165 2919524990 2919523602 Bacteria 3788128
166 2928155488 2928153084 Bacteria 4020257
167 2929220842 2929219909 Bacteria 6984360
168 2929227431 2929226422 Bacteria 7248583
169 2939658453 2939657138 Bacteria 3740283
170 2946047536 2946045630 Bacteria 8527308
171 2990089948 2990088156 Bacteria 6657676
172 2996227069 2996221748 Bacteria 6799777
173 2997604043 2997600082 Bacteria 9896405
174 649811378 649633069 Bacteria 6962533
175 8003315393 8003314358 Bacteria 10575343
176 8003832220 8003830390 Bacteria 6541657
177 8003862131 8003856774 Bacteria 7675274
178 8025484230 8025478263 Bacteria 8209203
179 8025532696 8025530807 Bacteria 8495698
180 8047895788 8047893842 Bacteria 11723082
181 8048129047 8048127548 Bacteria 11053136
182 8048363146 8048356638 Bacteria 11044339
183 8048372812 8048369669 Bacteria 11666822
184 8048381746 8048379754 Bacteria 11877923
185 8054163141 8054160619 Bacteria 7783213
186 8054710923 8054704163 Bacteria 7247792
187 8054727573 8054727385 Bacteria 7558670
188 8054735021 8054734606 Bacteria 6947278
189 8055417312 8055412473 Bacteria 6257500
190 8056447846 8056447290 Bacteria 7680491
191 8056670760 8056667051 Bacteria 6953971
192 Ga0307514_10085670
193 JGI24740J21852_10016646
194 JGI24737J22298_10000785
195 JGI24735J21928_10002543
196 Ga0068869_100048786
197 Ga0070668_100002996
198 Ga0070709_10011598
199 Ga0070714_100008744
200 Ga0070681_10101345
201 Ga0070707_100002427
202 Ga0070696_100001611
203 Ga0068859_100005704
204 Ga0070717_10099661
205 Ga0075363_100018053
206 Ga0075364_10010351
207 Ga0075428_100035913
208 Ga0075430_100005583
209 Ga0075431_100001880
210 Ga0075429_100011063
211 Ga0097620_100005704
212 Ga0105245_10011092
213 Ga0105247_10008534
214 Ga0114129_10000459
215 Ga0114129_10000915
216 Ga0105243_10038505
217 Ga0163163_10030727
218 Ga0213875_10002928
219 Ga0207710_10002148
220 Ga0207646_10033965
221 Ga0207646_10035805
222 Ga0207664_10000648
223 Ga0207664_10146189
224 Ga0207706_10186237
225 Ga0207709_10015510
226 Ga0207668_10040113
227 Ga0207708_10083939
228 Ga0207674_10096788
229 Ga0307517_10006962
230 Ga0307515_10025244
231 Ga0307513_10132915
232 Ga0307509_10123797
233 Ga0307508_10094462
234 Ga0307514_10025423
235 Ga0316579_10000906
236 Ga0307413_10059402
237 Ga0307409_100030109
238 Ga0307409_100049351
239 Ga0316574_0005115
240 Ga0373947_0038545
241 Ga0436364_0151261
242 Ga0436364_0540807
243 Ga0436362_0156636
244 Ga0439461_0001100
245 Ga0466972_0006473
246 Ga0466963_0020334
247 Ga0466964_0005883
248 Ga0466971_0011730
249 Ga0466970_0063716
250 Ga0466957_0004034
251 Ga0466960_0034825
252 Ga0466960_0041794
253 Ga0466958_0009784
254 Ga0466958_0040868
255 Ga0466958_0111933
256 Ga0466967_0054704
257 Ga0495603_0000548
258 Ga0495603_0006292
259 Ga0495629_0002165
260 Ga0495629_0006884
261 Ga0495629_0012534
262 Ga0495641_0020497
263 Ga0495594_0022495
264 Ga0495594_0067349
265 Ga0495618_0139972
266 Ga0495631_0015855
267 Ga0495643_0001114
268 Ga0495663_0052069
269 Ga0495642_0062730
270 Ga0495611_0030707
271 Ga0495658_0013804
272 Ga0495613_0006494
273 Ga0495613_0094004
274 Ga0495624_0056910
275 Ga0495670_0009064
276 Ga0495660_0016992
277 Ga0495604_0002405
278 Ga0495676_0023517
279 Ga0495676_0042321
280 Ga0495687_025924
281 Ga0495681_0001954
282 Ga0495686_0064806
283 Ga0495614_0001198
284 Ga0496101_0073647
285 Ga0496102_0000094
286 Ga0496102_0087178
287 Ga0496103_0000042
288 Ga0496103_0023396
289 Ga0496105_0025080
290 Ga0496107_0050159
291 Ga0496109_0011298
292 Ga0496112_0009899
293 Ga0496114_0020269
294 Ga0496117_0055768
295 Ga0496118_0007147
296 Ga0496121_0030684
297 Ga0496126_0100616
298 Ga0501042_0033598
299 nmdc:mga0yw44_11577_c1
300 nmdc:mga05p37_1759_c1
301 nmdc:mga05p37_7710_c1
302 nmdc:mga09592_14470_c1
303 nmdc:mga06r32_76353_c1
304 Ga0500646_0000554
305 Ga0500654_034675
306 Ga0500660_045551
307 Ga0500560_016923
308 Ga0500569_007130
309 Ga0500652_001309
310 Ga0500658_0003443
311 Ga0500559_0001017
312 Ga0500573_0000023
313 Ga0500573_0004790
314 Ga0500573_0071212
315 Ga0500600_0018549
316 Ga0500634_0010312
317 Ga0500656_003118
318 Ga0500587_002848
319 2501943245
320 2537900889
321 2585297405
322 2616903738
323 2623586730
324 2643761554
325 2643899336
326 2644387184
327 2644406929
328 2644458744
329 2676480390
330 2811844100
331 2831938690
332 2855671471
333 2855680627
334 2855684861
335 2856860643
336 2857292167
337 2858854550
338 2858875739
339 2858883676
340 2858890483
341 2858901114
342 2858903386
343 2862290782
344 2862996143
345 2867304078
346 2867374111
347 2867509589
348 2869048578
349 2869068353
350 2869070391
351 2870623981
352 2880493466
353 2880498842
354 2902585608
355 2919448802
356 2919524990
357 2928155488
358 2929220842
359 2929227431
360 2939658453
361 2946047536
362 2990089948
363 2996227069
364 2997604043
365 649811378
366 8003315393
367 8003832220
368 8003862131
369 8025484230
370 8025532696
371 8047895788
372 8048129047
373 8048363146
374 8048372812
375 8048381746
376 8054163141
377 8054710923
378 8054727573
379 8054735021
380 8055417312
381 8056447846
382 8056670760

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01266

DAO

FAD dependent oxidoreductase

62

428

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
3dzb-assembly1.cif.gz_A crystal structure of prephenate dehydrogenase from streptococcus thermophilus 0.9459 52 82
6xh9-assembly1.cif.gz_A-2 crystal structure of s. aureus tarj 0.9425 51 81
3dzb-assembly1.cif.gz_B crystal structure of prephenate dehydrogenase from streptococcus thermophilus 0.9415 52 82
6zk7-assembly1.cif.gz_AAAA crystal structure of human pyroxd1/fad complex 0.9103 52 84
2e37-assembly2.cif.gz_C structure of tt0471 protein from thermus thermophilus 0.9103 52 81
ID Description Score Start End Superfamily
3dzbA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9459 52 82 3.40.50.720
1yqzB01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9434 52 82 3.50.50.60
3c4aA01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9381 52 85 3.50.50.60
1gv4A01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.931 49 84 3.50.50.60
1e1nA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9303 51 84 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A7Y6E5N5-F1-model_v4 FAD-dependent oxidoreductase 0.9755 14 389 GO:0005737
AF-A0A7W1F8Y4-F1-model_v4 FAD-dependent oxidoreductase 0.9755 17 373 GO:0005737
AF-A0A7K1J0U6-F1-model_v4 FAD-dependent oxidoreductase 0.9747 17 402 GO:0005737
AF-A0A6I2WM64-F1-model_v4 FAD-dependent oxidoreductase 0.9523 12 319 GO:0005737
AF-A0A7W1F8Y4-F1-model_v4 FAD-dependent oxidoreductase 0.9519 17 373 GO:0005737

Map