F293664

General Info

Members Datasets Scaffolds Average Seq Length
191 128 382 283

Family's Representative Sequence

Representative Sequence 3300005445|Ga0070708_100055689|Ga0070708_1000556891
Length 329
Sequence MASGSVTMRTATGRPLVFVVRFLARAVASCSDGTGEKEESVQMSVWLITGSSRGFGRALVHAALERGNSVVATARRPEQLQDVVAAHPHDVLALPLDVTDAGAVKVAIRTGVERFGRLDVVVNNAGYANVAPIETGDDADFRTQFETNFWGVYHVSQAAIPQLRTQGGGTIVQFSSIGGRVGGSSGIASYQAAKFAVDGFSRVLAAETASFGIRVLVVEPSGFATDWAGTSMRVDRVPAEYEATVGVMSSHRGLATPAGDPKRAAEIIARVIERQHVPSHLLLGVNAVTMALAYSQRQLTEATEWSAVSRSADFAESYPVELPPDAAAP

Samples

Sample ID Description Type Environment
1 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
4 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
5 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
6 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
7 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
8 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
9 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
10 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
11 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
12 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
13 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
14 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
15 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
16 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
17 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
18 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
19 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
23 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
24 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
25 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
26 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
27 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
28 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
29 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
30 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
31 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
32 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
33 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
34 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
35 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
36 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
37 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
38 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
39 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
40 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
41 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
42 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
43 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
44 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
45 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
46 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
47 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
48 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
49 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
50 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
51 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
52 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
53 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
54 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
55 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
56 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
57 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
58 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
59 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
60 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
61 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
62 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
63 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
64 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
65 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
66 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
67 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
68 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
69 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
70 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
71 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
72 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
73 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
74 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
75 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
76 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
77 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
78 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
79 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
80 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
81 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
82 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
83 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
84 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
85 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
86 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
87 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
89 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
90 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
92 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
94 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
95 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
96 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
97 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
99 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
100 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
101 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
102 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
103 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
104 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
105 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
106 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
107 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
108 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
109 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
110 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
111 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
112 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
113 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
114 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
115 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
116 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
117 2643221687 Mycobacterium sp. Root135 Isolate Unclassified
118 2808606448 Streptomyces sp. 193411 Isolate Unclassified
119 2818991469 Terrabacter lapilli 3265 Isolate Rhizosphere
120 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
121 2902837492 Mycolicibacterium sp. P1-18 Isolate Unclassified
122 2929212328 Mycolicibacterium sp. R-73050 Hybrid assembly Isolate Unclassified
123 2932401849 Devosia sp. 2618 Isolate Rhizosphere
124 2984551494 Curtobacterium sp. SORGH_AS776 Isolate Aerial Root
125 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
126 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
127 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
128 8056447290 Streptomyces huiliensis SCA2-4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.72
Metatranscriptomes 0
Isolates 6.28

Biome Distribution

Category Percentage (%)
Aerial Root 0.52
Bulb 0
Endosphere 8.38
Nodule 0
Rhizoplane 1.05
Rhizosphere 71.73
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070708_100055689 3300005445 Bacteria 3517
2 JGI25406J46586_10051339 3300003203 Bacteria 1380
3 Ga0055540_1002751 3300003792 Bacteria 9028
4 Ga0055540_1007170 3300003792 Bacteria 4263
5 Ga0070709_10187975 3300005434 Bacteria 1455
6 Ga0070708_100091335 3300005445 Bacteria 2773
7 Ga0070706_100004732 3300005467 Bacteria 13046
8 Ga0070706_100048283 3300005467 Bacteria 3929
9 Ga0070706_100109489 3300005467 Bacteria 2570
10 Ga0070707_100007409 3300005468 Bacteria 10192
11 Ga0070707_100092130 3300005468 Bacteria 2934
12 Ga0070707_100126071 3300005468 Bacteria 2488
13 Ga0070698_100140198 3300005471 Bacteria 2369
14 Ga0070699_100017236 3300005518 Bacteria 6203
15 Ga0070699_100050214 3300005518 Bacteria 3611
16 Ga0081540_1036607 3300005983 Bacteria 2614
17 Ga0081539_10001091 3300005985 Bacteria 49336
18 Ga0070717_10104093 3300006028 Bacteria 2414
19 Ga0075365_10229077 3300006038 Bacteria 1304
20 Ga0070716_100167437 3300006173 Bacteria 1431
21 Ga0075369_10047389 3300006186 Bacteria 1853
22 Ga0099794_10139689 3300007265 Bacteria 1226
23 Ga0105237_10445997 3300009545 Bacteria 1300
24 Ga0209673_1004528 3300025273 Bacteria 7395
25 Ga0209051_1000681 3300025303 Bacteria 37784
26 Ga0209051_1001040 3300025303 Bacteria 26240
27 Ga0207684_10062851 3300025910 Bacteria 3152
28 Ga0207646_10014998 3300025922 Bacteria 7335
29 Ga0207646_10031387 3300025922 Bacteria 4809
30 Ga0207646_10038590 3300025922 Bacteria 4301
31 Ga0207646_10197913 3300025922 Bacteria 1815
32 Ga0207665_10256834 3300025939 Bacteria 1293
33 Ga0207639_10134347 3300026041 Bacteria 2052
34 Ga0307515_10000524 3300028794 Bacteria 91311
35 Ga0307515_10325895 3300028794 Bacteria 1198
36 Ga0307511_10000334 3300030521 Bacteria 50044
37 Ga0307513_10013351 3300031456 Bacteria 10086
38 Ga0307509_10016211 3300031507 Bacteria 8633
39 Ga0307509_10058145 3300031507 Bacteria 4095
40 Ga0307509_10079503 3300031507 Bacteria 3394
41 Ga0307508_10190601 3300031616 Bacteria 1652
42 Ga0307508_10202524 3300031616 Bacteria 1585
43 Ga0307516_10013919 3300031730 Bacteria 8536
44 Ga0307516_10026261 3300031730 Bacteria 5916
45 Ga0307405_10257106 3300031731 Bacteria 1302
46 Ga0307518_10007744 3300031838 Bacteria 7678
47 Ga0307518_10226116 3300031838 Bacteria 1216
48 Ga0307409_100139557 3300031995 Bacteria 2086
49 Ga0307415_100173911 3300032126 Bacteria 1682
50 Ga0307507_10032007 3300033179 Bacteria 5505
51 Ga0307507_10034002 3300033179 Bacteria 5278
52 Ga0307510_10043754 3300033180 Bacteria 4862
53 Ga0307510_10112551 3300033180 Bacteria 2458
54 Ga0307510_10317165 3300033180 Bacteria 1017
55 Ga0466972_0078372 3300044658 Bacteria 1574
56 Ga0466965_0000735 3300044683 Bacteria 12252
57 Ga0466965_0046723 3300044683 Bacteria 2143
58 Ga0466965_0121553 3300044683 Bacteria 1349
59 Ga0466971_0061681 3300044719 Bacteria 1696
60 Ga0466971_0062743 3300044719 Bacteria 1682
61 Ga0466968_0059961 3300044735 Bacteria 1639
62 Ga0466970_0014999 3300044765 Bacteria 3984
63 Ga0466970_0234786 3300044765 Bacteria 1025
64 Ga0466957_0078773 3300044842 Bacteria 2049
65 Ga0466960_0000726 3300044901 Bacteria 11520
66 Ga0466960_0004675 3300044901 Bacteria 5367
67 Ga0466960_0186301 3300044901 Bacteria 1127
68 Ga0466959_0073001 3300045049 Bacteria 2482
69 Ga0466959_0356980 3300045049 Bacteria 996
70 Ga0466967_0513889 3300045976 Bacteria 1176
71 Ga0495592_0025740 3300046454 Bacteria 4466
72 Ga0495629_0031408 3300046459 Bacteria 3761
73 Ga0495629_0155400 3300046459 Bacteria 1589
74 Ga0495651_0000997 3300046462 Bacteria 21966
75 Ga0495651_0001693 3300046462 Bacteria 17046
76 Ga0495662_0000551 3300046476 Bacteria 17180
77 Ga0495664_0004678 3300046477 Bacteria 7486
78 Ga0495594_0078213 3300046499 Bacteria 1846
79 Ga0495618_0008513 3300046514 Bacteria 6202
80 Ga0495618_0014644 3300046514 Bacteria 4782
81 Ga0495628_0003499 3300046516 Bacteria 14056
82 Ga0495628_0011711 3300046516 Bacteria 7407
83 Ga0495628_0122877 3300046516 Bacteria 1990
84 Ga0495630_0019502 3300046517 Bacteria 4985
85 Ga0495632_0049155 3300046519 Bacteria 2086
86 Ga0495652_0001679 3300046529 Bacteria 24013
87 Ga0495652_0034433 3300046529 Bacteria 4414
88 Ga0495586_0131343 3300046535 Bacteria 1402
89 Ga0495587_0001028 3300046536 Bacteria 18349
90 Ga0495587_0115974 3300046536 Bacteria 1536
91 Ga0495645_0008907 3300046543 Bacteria 7010
92 Ga0495645_0036761 3300046543 Bacteria 3569
93 Ga0495622_0031261 3300046557 Bacteria 2489
94 Ga0495634_0052351 3300046642 Bacteria 2736
95 Ga0495625_0002537 3300046660 Bacteria 19641
96 Ga0495588_0005293 3300046674 Bacteria 5736
97 Ga0495657_0007809 3300046675 Bacteria 8215
98 Ga0495657_0138707 3300046675 Bacteria 1517
99 Ga0495646_0000400 3300046680 Bacteria 22769
100 Ga0495658_0047384 3300046683 Bacteria 2420
101 Ga0495613_0001398 3300046689 Bacteria 18380
102 Ga0495671_0046768 3300046692 Bacteria 2163
103 Ga0495600_0047356 3300046809 Bacteria 2804
104 Ga0495581_0005016 3300047315 Bacteria 7668
105 Ga0495604_0000673 3300047317 Bacteria 28933
106 Ga0495604_0015778 3300047317 Bacteria 6029
107 Ga0495674_0349018 3300047319 Bacteria 1201
108 Ga0495676_0037453 3300047321 Bacteria 4036
109 Ga0495687_001226 3300047443 Bacteria 24519
110 Ga0495675_0045099 3300047444 Bacteria 2807
111 Ga0495681_0002334 3300047470 Bacteria 13628
112 Ga0495686_0050277 3300047472 Bacteria 2620
113 Ga0495593_0003505 3300047673 Bacteria 9384
114 Ga0495602_0157020 3300048088 Bacteria 1780
115 Ga0495614_0011600 3300048089 Bacteria 3874
116 Ga0495614_0026023 3300048089 Bacteria 2521
117 Ga0496100_0317851 3300048903 Bacteria 1169
118 Ga0496112_0048979 3300048915 Bacteria 4141
119 Ga0496117_0024165 3300048920 Bacteria 4815
120 Ga0496117_0028578 3300048920 Bacteria 4316
121 Ga0496117_0034448 3300048920 Bacteria 3814
122 Ga0496118_0012099 3300048921 Bacteria 8330
123 Ga0496118_0161488 3300048921 Bacteria 1385
124 Ga0496121_0126862 3300048924 Bacteria 1917
125 Ga0496122_0060809 3300048925 Bacteria 2778
126 Ga0496122_0215362 3300048925 Bacteria 1108
127 Ga0496124_0335030 3300048927 Bacteria 1077
128 Ga0496126_0000208 3300048929 Bacteria 131604
129 Ga0496126_0009735 3300048929 Bacteria 10180
130 Ga0501031_0053733 3300049568 Bacteria 2625
131 Ga0501032_0090099 3300049569 Bacteria 2035
132 Ga0501032_0097872 3300049569 Bacteria 1944
133 Ga0501033_0008436 3300049570 Bacteria 7980
134 Ga0501033_0013534 3300049570 Bacteria 6210
135 Ga0501034_0007316 3300049571 Bacteria 11765
136 Ga0501034_0028848 3300049571 Bacteria 5645
137 Ga0501034_0080720 3300049571 Bacteria 3256
138 Ga0501034_0371773 3300049571 Bacteria 1355
139 Ga0501036_0066675 3300049572 Bacteria 3045
140 Ga0501036_0105035 3300049572 Bacteria 2388
141 Ga0501037_0063304 3300049573 Bacteria 2696
142 Ga0501038_0084751 3300049574 Bacteria 2666
143 Ga0501038_0203952 3300049574 Bacteria 1585
144 Ga0501039_0074849 3300049575 Bacteria 2632
145 Ga0501042_0017801 3300049578 Bacteria 4907
146 Ga0501043_0001187 3300049579 Bacteria 22900
147 Ga0501046_0032543 3300049580 Bacteria 4222
148 Ga0501046_0035857 3300049580 Bacteria 3995
149 Ga0501046_0054546 3300049580 Bacteria 3143
150 Ga0501047_0006280 3300049581 Bacteria 11172
151 Ga0501047_0025750 3300049581 Bacteria 5657
152 Ga0501047_0029901 3300049581 Bacteria 5251
153 Ga0501047_0076961 3300049581 Bacteria 3210
154 Ga0501047_0088697 3300049581 Bacteria 2970
155 Ga0501048_0004091 3300049582 Bacteria 11106
156 Ga0501070_0041557 3300049586 Bacteria 3830
157 Ga0501073_0016325 3300049589 Bacteria 5381
158 Ga0501073_0039785 3300049589 Bacteria 3330
159 Ga0501080_0189861 3300049742 Bacteria 1888
160 Ga0501035_0015525 3300049822 Bacteria 7026
161 Ga0501035_0105207 3300049822 Bacteria 2474
162 Ga0501035_0328853 3300049822 Bacteria 1283
163 Ga0501044_0012527 3300049823 Bacteria 9185
164 Ga0501044_0041211 3300049823 Bacteria 4807
165 Ga0501044_0082425 3300049823 Plasmid 3255
166 Ga0501044_0173633 3300049823 Bacteria 2125
167 nmdc:mga03683_43217_c1 3300050489 Bacteria 1858
168 Ga0495601_0006266 3300053077 Bacteria 6947
169 Ga0495619_0180079 3300053085 Bacteria 1462
170 Ga0500583_0012160 3300053092 Bacteria 3273
171 Ga0500640_009388 3300053095 Bacteria 3908
172 Ga0500560_004403 3300053107 Bacteria 2990
173 Ga0500572_016772 3300053111 Bacteria 1872
174 Ga0500614_011174 3300053123 Bacteria 1940
175 Ga0500568_0000093 3300053139 Bacteria 83403
176 Ga0500573_0054899 3300053140 Bacteria 2287
177 Ga0500624_015230 3300053157 Bacteria 1173
178 Ga0466962_0110800 3300061719 Bacteria 1321
179 Ga0466962_0193768 3300061719 Bacteria 992
180 2644487588 2643221687 Bacteria 6500351
181 2809229101 2808606448 Bacteria 8656184
182 2819728156 2818991469 Bacteria 4644110
183 2819747286 2818991472 Bacteria 10089953
184 2902839064 2902837492 Bacteria 6697721
185 2929218686 2929212328 Bacteria 7708288
186 2932402318 2932401849 Bacteria 4262978
187 2984553031 2984551494 Bacteria 3877562
188 2995464458 2995463766 Bacteria 8577691
189 8003318250 8003314358 Bacteria 10575343
190 8025485378 8025478263 Bacteria 8209203
191 8056451198 8056447290 Bacteria 7680491
192 Ga0070708_100055689
193 JGI25406J46586_10051339
194 Ga0055540_1002751
195 Ga0055540_1007170
196 Ga0070709_10187975
197 Ga0070708_100091335
198 Ga0070706_100004732
199 Ga0070706_100048283
200 Ga0070706_100109489
201 Ga0070707_100007409
202 Ga0070707_100092130
203 Ga0070707_100126071
204 Ga0070698_100140198
205 Ga0070699_100017236
206 Ga0070699_100050214
207 Ga0081540_1036607
208 Ga0081539_10001091
209 Ga0070717_10104093
210 Ga0075365_10229077
211 Ga0070716_100167437
212 Ga0075369_10047389
213 Ga0099794_10139689
214 Ga0105237_10445997
215 Ga0209673_1004528
216 Ga0209051_1000681
217 Ga0209051_1001040
218 Ga0207684_10062851
219 Ga0207646_10014998
220 Ga0207646_10031387
221 Ga0207646_10038590
222 Ga0207646_10197913
223 Ga0207665_10256834
224 Ga0207639_10134347
225 Ga0307515_10000524
226 Ga0307515_10325895
227 Ga0307511_10000334
228 Ga0307513_10013351
229 Ga0307509_10016211
230 Ga0307509_10058145
231 Ga0307509_10079503
232 Ga0307508_10190601
233 Ga0307508_10202524
234 Ga0307516_10013919
235 Ga0307516_10026261
236 Ga0307405_10257106
237 Ga0307518_10007744
238 Ga0307518_10226116
239 Ga0307409_100139557
240 Ga0307415_100173911
241 Ga0307507_10032007
242 Ga0307507_10034002
243 Ga0307510_10043754
244 Ga0307510_10112551
245 Ga0307510_10317165
246 Ga0466972_0078372
247 Ga0466965_0000735
248 Ga0466965_0046723
249 Ga0466965_0121553
250 Ga0466971_0061681
251 Ga0466971_0062743
252 Ga0466968_0059961
253 Ga0466970_0014999
254 Ga0466970_0234786
255 Ga0466957_0078773
256 Ga0466960_0000726
257 Ga0466960_0004675
258 Ga0466960_0186301
259 Ga0466959_0073001
260 Ga0466959_0356980
261 Ga0466967_0513889
262 Ga0495592_0025740
263 Ga0495629_0031408
264 Ga0495629_0155400
265 Ga0495651_0000997
266 Ga0495651_0001693
267 Ga0495662_0000551
268 Ga0495664_0004678
269 Ga0495594_0078213
270 Ga0495618_0008513
271 Ga0495618_0014644
272 Ga0495628_0003499
273 Ga0495628_0011711
274 Ga0495628_0122877
275 Ga0495630_0019502
276 Ga0495632_0049155
277 Ga0495652_0001679
278 Ga0495652_0034433
279 Ga0495586_0131343
280 Ga0495587_0001028
281 Ga0495587_0115974
282 Ga0495645_0008907
283 Ga0495645_0036761
284 Ga0495622_0031261
285 Ga0495634_0052351
286 Ga0495625_0002537
287 Ga0495588_0005293
288 Ga0495657_0007809
289 Ga0495657_0138707
290 Ga0495646_0000400
291 Ga0495658_0047384
292 Ga0495613_0001398
293 Ga0495671_0046768
294 Ga0495600_0047356
295 Ga0495581_0005016
296 Ga0495604_0000673
297 Ga0495604_0015778
298 Ga0495674_0349018
299 Ga0495676_0037453
300 Ga0495687_001226
301 Ga0495675_0045099
302 Ga0495681_0002334
303 Ga0495686_0050277
304 Ga0495593_0003505
305 Ga0495602_0157020
306 Ga0495614_0011600
307 Ga0495614_0026023
308 Ga0496100_0317851
309 Ga0496112_0048979
310 Ga0496117_0024165
311 Ga0496117_0028578
312 Ga0496117_0034448
313 Ga0496118_0012099
314 Ga0496118_0161488
315 Ga0496121_0126862
316 Ga0496122_0060809
317 Ga0496122_0215362
318 Ga0496124_0335030
319 Ga0496126_0000208
320 Ga0496126_0009735
321 Ga0501031_0053733
322 Ga0501032_0090099
323 Ga0501032_0097872
324 Ga0501033_0008436
325 Ga0501033_0013534
326 Ga0501034_0007316
327 Ga0501034_0028848
328 Ga0501034_0080720
329 Ga0501034_0371773
330 Ga0501036_0066675
331 Ga0501036_0105035
332 Ga0501037_0063304
333 Ga0501038_0084751
334 Ga0501038_0203952
335 Ga0501039_0074849
336 Ga0501042_0017801
337 Ga0501043_0001187
338 Ga0501046_0032543
339 Ga0501046_0035857
340 Ga0501046_0054546
341 Ga0501047_0006280
342 Ga0501047_0025750
343 Ga0501047_0029901
344 Ga0501047_0076961
345 Ga0501047_0088697
346 Ga0501048_0004091
347 Ga0501070_0041557
348 Ga0501073_0016325
349 Ga0501073_0039785
350 Ga0501080_0189861
351 Ga0501035_0015525
352 Ga0501035_0105207
353 Ga0501035_0328853
354 Ga0501044_0012527
355 Ga0501044_0041211
356 Ga0501044_0082425
357 Ga0501044_0173633
358 nmdc:mga03683_43217_c1
359 Ga0495601_0006266
360 Ga0495619_0180079
361 Ga0500583_0012160
362 Ga0500640_009388
363 Ga0500560_004403
364 Ga0500572_016772
365 Ga0500614_011174
366 Ga0500568_0000093
367 Ga0500573_0054899
368 Ga0500624_015230
369 Ga0466962_0110800
370 Ga0466962_0193768
371 2644487588
372 2809229101
373 2819728156
374 2819747286
375 2902839064
376 2929218686
377 2932402318
378 2984553031
379 2995464458
380 8003318250
381 8025485378
382 8056451198

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

44

234

0.96

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

50

251

0.9

PF08659

KR

KR domain

44

219

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
3grp-assembly1.cif.gz_D 2.1 angstrom crystal structure of 3-ketoacyl-(acyl-carrier-protein) reductase from bartonella henselae 0.9444 1 181
4trr-assembly2.cif.gz_G crystal structure of a putative putative d-beta-hydroxybutyrate dehydrogenase from burkholderia cenocepacia j2315 0.9384 3 181
7e6o-assembly1.cif.gz_D crystal structure of polyol dehydrogenase from paracoccus denitrificans 0.9369 3 182
4lvu-assembly1.cif.gz_A-2 crystal structure of a putative short chain dehydrogenase from burkholderia thailandensis 0.9329 3 178
3m1a-assembly4.cif.gz_D the crystal structure of a short-chain dehydrogenase from streptomyces avermitilis to 2a 0.9294 2 269
ID Description Score Start End Superfamily
4trrG00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9384 3 181 3.40.50.720
af_Q54WM6_4_292_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9363 2 269 3.40.50.720
af_F4J128_251_373_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9355 85 183 3.40.50.720
4lvuA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9329 3 178 3.40.50.720
af_Q6PKH6_18_219_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9318 3 177 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A2W6TGF0-F1-model_v4 Short-chain dehydrogenase/reductase 0.9728 1 190 GO:0016491
AF-A0A1E4ICS6-F1-model_v4 Short-chain dehydrogenase/reductase 0.9724 2 271 GO:0016491
AF-A0A527GF52-F1-model_v4 SDR family NAD(P)-dependent oxidoreductase 0.9718 34 265 GO:0016491
AF-H6N4K7-F1-model_v4 Short-chain dehydrogenase/reductase 0.9715 2 271 GO:0016491
AF-A0A4U9VPU5-F1-model_v4 NADP-dependent 3-hydroxy acid dehydrogenase YdfG (EC 1.1.1.-) 0.9714 1 271 GO:0016491

Map