F293107
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 190 | 136 | 175 | 130 |
Family's Representative Sequence
| Representative Sequence | 3300049514|Ga0501291_042289|Ga0501291_042289_304_771 |
| Length | 155 |
| Sequence | VVEPVETTPGWSSLSRPPARHGTLISMTEHNVLGGELEPCGTDPVTGFYRDGSCTCGPEDIGVHAVCAVMTAEFLAHQRSVGNDLSTPMPQWGFPGLQPGDRWCVVAMRWRQAYEDGVYAPVVLASTNERALDVVPLAWLQEHSVDVPADPGDLG |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2527291627 | Frankia casuarinae Thr | Isolate | Nodule |
| 2 | 2527291629 | Frankia sp. BMG5.23 | Isolate | Nodule |
| 3 | 2546825537 | Frankia sp. CcI6 | Isolate | Rhizoplane |
| 4 | 2576861822 | Frankia sp. CeD | Isolate | Nodule |
| 5 | 2579778521 | Frankia torreyi CpI1-S | Isolate | Unclassified |
| 6 | 2619618881 | Frankia sp. ACN1ag | Isolate | Unclassified |
| 7 | 2619619003 | Frankia sp. CpI1-P | Isolate | Nodule |
| 8 | 2626541554 | Frankia sp. AvcI.1 | Isolate | Nodule |
| 9 | 2684623036 | Frankia sp. CgIM4 | Isolate | Nodule |
| 10 | 2710264753 | Frankia sp. KB5 | Isolate | Nodule |
| 11 | 2773857924 | Frankia sp. CgIS1 | Isolate | Nodule |
| 12 | 2811994874 | Nocardioides sp. SLBN-35 | Isolate | Unclassified |
| 13 | 3300003316 | Sugarcane root Sample L1 | Metagenome | Unclassified |
| 14 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 16 | 3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Metagenome | Rhizosphere |
| 17 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 18 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 19 | 3300005341 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG | Metagenome | Rhizosphere |
| 20 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 24 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 25 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 26 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 27 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 28 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 29 | 3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Metagenome | Rhizosphere |
| 30 | 3300005718 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 | Metagenome | Rhizosphere |
| 31 | 3300005981 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 | Metagenome | Rhizosphere |
| 32 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 33 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 34 | 3300006163 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG | Metagenome | Rhizosphere |
| 35 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 36 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 37 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 39 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 40 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 41 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 42 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 43 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 44 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 45 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 46 | 3300014497 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG | Metagenome | Rhizosphere |
| 47 | 3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Metagenome | Rhizosphere |
| 48 | 3300020070 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 49 | 3300020081 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 50 | 3300020082 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 51 | 3300025899 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025900 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300031241 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG | Metagenome | Rhizosphere |
| 68 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 69 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 70 | 3300031595 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG | Metagenome | Rhizosphere |
| 71 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 72 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 73 | 3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Metagenome | Rhizosphere |
| 74 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 75 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 76 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 77 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 78 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 79 | 3300035083 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 | Metagenome | Rhizosphere |
| 80 | 3300035171 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 | Metagenome | Rhizosphere |
| 81 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 82 | 3300035725 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 | Metagenome | Rhizosphere |
| 83 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 84 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 85 | 3300038996 | Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 | Metagenome | Rhizosphere |
| 86 | 3300041452 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG | Metagenome | Rhizoplane |
| 87 | 3300041453 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG | Metagenome | Rhizoplane |
| 88 | 3300041456 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG | Metagenome | Rhizoplane |
| 89 | 3300041494 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG | Metagenome | Unclassified |
| 90 | 3300041509 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG | Metagenome | Unclassified |
| 91 | 3300042014 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 | Metagenome | Rhizosphere |
| 92 | 3300042145 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 | Metagenome | Rhizosphere |
| 93 | 3300042156 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 | Metagenome | Rhizosphere |
| 94 | 3300042435 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 | Metagenome | Rhizosphere |
| 95 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 96 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 97 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 98 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 99 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 100 | 3300046477 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300046511 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300047321 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 105 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 106 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 107 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 108 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 109 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 110 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 111 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 112 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 113 | 3300049514 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A25_B_5_drought | Metagenome | Rhizosphere |
| 114 | 3300049521 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought | Metagenome | Rhizosphere |
| 115 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 116 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 117 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 118 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 119 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 120 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 121 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 122 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 123 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 124 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 125 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 126 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 127 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 128 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 129 | 3300053078 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere | Metagenome | Rhizosphere |
| 130 | 3300053083 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere | Metagenome | Rhizosphere |
| 131 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 132 | 3300053117 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere | Metagenome | Endosphere |
| 133 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
| 134 | 637000116 | Frankia casuarinae CcI3 | Isolate | Nodule |
| 135 | 8054609563 | Nocardioides astragali CGMCC 4.7327 | Isolate | Nodule |
| 136 | 8054913762 | Frankia gtarii Agncl-10 | Isolate | Nodule |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 89.47 |
| Metatranscriptomes | 2.63 |
| Isolates | 7.89 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 1.58 |
| Nodule | 5.79 |
| Rhizoplane | 9.47 |
| Rhizosphere | 78.95 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 4.21 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | rootH1_10126366 | 3300003316 | Bacteria | 1122 |
| 2 | Ga0070658_10942107 | 3300005327 | Bacteria | 751 |
| 3 | Ga0070683_100010493 | 3300005329 | Bacteria | 7967 |
| 4 | Ga0070683_100016543 | 3300005329 | Bacteria | 6506 |
| 5 | Ga0070683_100782924 | 3300005329 | Bacteria | 914 |
| 6 | Ga0070690_100616950 | 3300005330 | Bacteria | 825 |
| 7 | Ga0068869_101201089 | 3300005334 | Bacteria | 666 |
| 8 | Ga0070680_100289944 | 3300005336 | Bacteria | 1387 |
| 9 | Ga0070680_100374951 | 3300005336 | Bacteria | 1211 |
| 10 | Ga0070691_10619059 | 3300005341 | Bacteria | 641 |
| 11 | Ga0070661_100989026 | 3300005344 | Bacteria | 697 |
| 12 | Ga0070668_101237503 | 3300005347 | Bacteria | 677 |
| 13 | Ga0070659_100559042 | 3300005366 | Bacteria | 980 |
| 14 | Ga0070659_100803312 | 3300005366 | Bacteria | 818 |
| 15 | Ga0070708_100248736 | 3300005445 | Bacteria | 1670 |
| 16 | Ga0070663_101690702 | 3300005455 | Bacteria | 566 |
| 17 | Ga0070663_101919079 | 3300005455 | Bacteria | 532 |
| 18 | Ga0070684_100534413 | 3300005535 | Bacteria | 1087 |
| 19 | Ga0068855_101873387 | 3300005563 | Bacteria | 608 |
| 20 | Ga0068857_100021725 | 3300005577 | Bacteria | 5648 |
| 21 | Ga0068854_100148338 | 3300005578 | Bacteria | 1806 |
| 22 | Ga0070702_100887323 | 3300005615 | Bacteria | 697 |
| 23 | Ga0068866_10460082 | 3300005718 | Bacteria | 834 |
| 24 | Ga0081538_10000308 | 3300005981 | Bacteria | 56278 |
| 25 | Ga0070717_10479098 | 3300006028 | Bacteria | 1123 |
| 26 | Ga0075365_10026898 | 3300006038 | Bacteria | 3655 |
| 27 | Ga0075365_10081839 | 3300006038 | Bacteria | 2188 |
| 28 | Ga0070715_10076565 | 3300006163 | Bacteria | 1508 |
| 29 | Ga0070712_100182221 | 3300006175 | Bacteria | 1637 |
| 30 | Ga0068865_100460039 | 3300006881 | Bacteria | 1054 |
| 31 | Ga0111539_10304176 | 3300009094 | Bacteria | 1856 |
| 32 | Ga0111539_10567098 | 3300009094 | Bacteria | 1322 |
| 33 | Ga0105245_10307721 | 3300009098 | Bacteria | 1557 |
| 34 | Ga0105245_12418755 | 3300009098 | Bacteria | 579 |
| 35 | Ga0105237_10565107 | 3300009545 | Bacteria | 1144 |
| 36 | Ga0105237_10656131 | 3300009545 | Bacteria | 1056 |
| 37 | Ga0105238_11895617 | 3300009551 | Bacteria | 629 |
| 38 | Ga0105239_11111814 | 3300010375 | Bacteria | 910 |
| 39 | Ga0105239_11421141 | 3300010375 | Bacteria | 801 |
| 40 | Ga0157369_10517854 | 3300013105 | Bacteria | 1234 |
| 41 | Ga0157369_10944496 | 3300013105 | Bacteria | 884 |
| 42 | Ga0163162_10248413 | 3300013306 | Bacteria | 1911 |
| 43 | Ga0157372_10059918 | 3300013307 | Bacteria | 4259 |
| 44 | Ga0157372_10887102 | 3300013307 | Bacteria | 1035 |
| 45 | Ga0157372_11886155 | 3300013307 | Bacteria | 687 |
| 46 | Ga0157380_11448850 | 3300014326 | Bacteria | 738 |
| 47 | Ga0182008_10047573 | 3300014497 | Bacteria | 2131 |
| 48 | Ga0182008_10058701 | 3300014497 | Bacteria | 1899 |
| 49 | Ga0182008_10117686 | 3300014497 | Bacteria | 1319 |
| 50 | Ga0157377_10095379 | 3300014745 | Bacteria | 1763 |
| 51 | Ga0206356_10216136 | 3300020070 | Bacteria | 880 |
| 52 | Ga0206354_10591087 | 3300020081 | Bacteria | 1005 |
| 53 | Ga0206353_10039145 | 3300020082 | Bacteria | 713 |
| 54 | Ga0206353_10739497 | 3300020082 | Bacteria | 2352 |
| 55 | Ga0206353_11695621 | 3300020082 | Bacteria | 1804 |
| 56 | Ga0207642_10130433 | 3300025899 | Bacteria | 1311 |
| 57 | Ga0207710_10000105 | 3300025900 | Bacteria | 105872 |
| 58 | Ga0207647_10270573 | 3300025904 | Bacteria | 971 |
| 59 | Ga0207647_10796421 | 3300025904 | Bacteria | 508 |
| 60 | Ga0207707_10668784 | 3300025912 | Bacteria | 874 |
| 61 | Ga0207671_10478623 | 3300025914 | Bacteria | 992 |
| 62 | Ga0207693_10814286 | 3300025915 | Bacteria | 719 |
| 63 | Ga0207649_10872321 | 3300025920 | Bacteria | 705 |
| 64 | Ga0207652_10558262 | 3300025921 | Bacteria | 1029 |
| 65 | Ga0207700_10129835 | 3300025928 | Bacteria | 2056 |
| 66 | Ga0207690_10722463 | 3300025932 | Bacteria | 820 |
| 67 | Ga0207711_10024820 | 3300025941 | Bacteria | 5029 |
| 68 | Ga0207689_10951009 | 3300025942 | Bacteria | 725 |
| 69 | Ga0207661_10016266 | 3300025944 | Bacteria | 5487 |
| 70 | Ga0207661_10212999 | 3300025944 | Bacteria | 1704 |
| 71 | Ga0207702_11446229 | 3300026078 | Bacteria | 681 |
| 72 | Ga0207674_10038490 | 3300026116 | Bacteria | 4962 |
| 73 | Ga0207698_12075272 | 3300026142 | Bacteria | 582 |
| 74 | Ga0265325_10224157 | 3300031241 | Bacteria | 859 |
| 75 | Ga0265327_10322104 | 3300031251 | Bacteria | 678 |
| 76 | Ga0307408_101725348 | 3300031548 | Bacteria | 597 |
| 77 | Ga0265313_10065189 | 3300031595 | Bacteria | 1692 |
| 78 | Ga0307410_10102810 | 3300031852 | Bacteria | 2051 |
| 79 | Ga0307406_10219894 | 3300031901 | Bacteria | 1411 |
| 80 | Ga0307406_10380421 | 3300031901 | Bacteria | 1113 |
| 81 | Ga0307406_10808332 | 3300031901 | Bacteria | 792 |
| 82 | Ga0307407_10051776 | 3300031903 | Bacteria | 2355 |
| 83 | Ga0307407_10791096 | 3300031903 | Bacteria | 721 |
| 84 | Ga0307412_10153960 | 3300031911 | Bacteria | 1700 |
| 85 | Ga0307412_10436374 | 3300031911 | Bacteria | 1075 |
| 86 | Ga0307412_10579435 | 3300031911 | Unclassified | 947 |
| 87 | Ga0307409_100006548 | 3300031995 | Bacteria | 6861 |
| 88 | Ga0307409_100011353 | 3300031995 | Bacteria | 5609 |
| 89 | Ga0307409_100658126 | 3300031995 | Bacteria | 1042 |
| 90 | Ga0307409_100756004 | 3300031995 | Bacteria | 976 |
| 91 | Ga0307416_100004779 | 3300032002 | Bacteria | 8226 |
| 92 | Ga0307416_100232692 | 3300032002 | Bacteria | 1778 |
| 93 | Ga0307416_100403171 | 3300032002 | Bacteria | 1406 |
| 94 | Ga0307416_100489940 | 3300032002 | Bacteria | 1291 |
| 95 | Ga0307411_10460193 | 3300032005 | Unclassified | 1066 |
| 96 | Ga0307411_10807253 | 3300032005 | Bacteria | 827 |
| 97 | Ga0307415_100000214 | 3300032126 | Bacteria | 25412 |
| 98 | Ga0373926_0002485 | 3300035083 | Bacteria | 5852 |
| 99 | Ga0373946_0028445 | 3300035171 | Bacteria | 2218 |
| 100 | Ga0373935_0000341 | 3300035692 | Bacteria | 23703 |
| 101 | Ga0373947_0001989 | 3300035725 | Bacteria | 12504 |
| 102 | Ga0395905_0042417 | 3300037471 | Bacteria | 4270 |
| 103 | Ga0395905_0247638 | 3300037471 | Bacteria | 1665 |
| 104 | Ga0395901_0014942 | 3300038443 | Bacteria | 7889 |
| 105 | Ga0395901_0839937 | 3300038443 | Bacteria | 905 |
| 106 | Ga0395901_2122456 | 3300038443 | Bacteria | 507 |
| 107 | Ga0242420_135655 | 3300038996 | Bacteria | 545 |
| 108 | Ga0451793_0485574 | 3300041452 | Bacteria | 734 |
| 109 | Ga0451797_0279336 | 3300041453 | Bacteria | 771 |
| 110 | Ga0451795_0002929 | 3300041456 | Bacteria | 618 |
| 111 | Ga0451837_1412387 | 3300041494 | Bacteria | 777 |
| 112 | Ga0451837_1519674 | 3300041494 | Bacteria | 626 |
| 113 | Ga0451843_0520519 | 3300041509 | Bacteria | 1675 |
| 114 | Ga0451843_0852152 | 3300041509 | Bacteria | 509 |
| 115 | Ga0439457_015733 | 3300042014 | Bacteria | 1689 |
| 116 | Ga0450906_021998 | 3300042145 | Bacteria | 1137 |
| 117 | Ga0439446_0011114 | 3300042156 | Bacteria | 2439 |
| 118 | Ga0439434_0033585 | 3300042435 | Bacteria | 1564 |
| 119 | Ga0466961_0235050 | 3300044693 | Bacteria | 1127 |
| 120 | Ga0466963_0182041 | 3300044694 | Bacteria | 1467 |
| 121 | Ga0466963_0241314 | 3300044694 | Bacteria | 1267 |
| 122 | Ga0466970_0037292 | 3300044765 | Bacteria | 2576 |
| 123 | Ga0466970_0495177 | 3300044765 | Bacteria | 703 |
| 124 | Ga0466960_0050388 | 3300044901 | Bacteria | 2007 |
| 125 | Ga0466960_0059015 | 3300044901 | Bacteria | 1876 |
| 126 | Ga0466960_0192628 | 3300044901 | Bacteria | 1110 |
| 127 | Ga0466960_0434848 | 3300044901 | Bacteria | 760 |
| 128 | Ga0466960_0490096 | 3300044901 | Bacteria | 719 |
| 129 | Ga0466967_0042421 | 3300045976 | Bacteria | 3931 |
| 130 | Ga0466967_0101387 | 3300045976 | Bacteria | 2631 |
| 131 | Ga0466967_0563428 | 3300045976 | Bacteria | 1122 |
| 132 | Ga0466967_0579005 | 3300045976 | Bacteria | 1106 |
| 133 | Ga0466967_1051591 | 3300045976 | Bacteria | 811 |
| 134 | Ga0466967_1328582 | 3300045976 | Bacteria | 716 |
| 135 | Ga0495664_0036577 | 3300046477 | Bacteria | 2894 |
| 136 | Ga0495608_0608086 | 3300046511 | Bacteria | 656 |
| 137 | Ga0495674_0071366 | 3300047319 | Bacteria | 2998 |
| 138 | Ga0495676_0556795 | 3300047321 | Bacteria | 749 |
| 139 | Ga0496100_1657165 | 3300048903 | Bacteria | 506 |
| 140 | Ga0496101_0061716 | 3300048904 | Bacteria | 2723 |
| 141 | Ga0496102_0147744 | 3300048905 | Bacteria | 2207 |
| 142 | Ga0496102_1589256 | 3300048905 | Bacteria | 572 |
| 143 | Ga0496104_0850620 | 3300048907 | Bacteria | 818 |
| 144 | Ga0496106_0191761 | 3300048909 | Bacteria | 1625 |
| 145 | Ga0496107_0232518 | 3300048910 | Bacteria | 1372 |
| 146 | Ga0496109_0408152 | 3300048912 | Bacteria | 1283 |
| 147 | Ga0496109_0922663 | 3300048912 | Bacteria | 811 |
| 148 | Ga0496109_1522517 | 3300048912 | Bacteria | 604 |
| 149 | Ga0496111_0591892 | 3300048914 | Bacteria | 812 |
| 150 | Ga0496111_0979707 | 3300048914 | Bacteria | 606 |
| 151 | Ga0496115_0422513 | 3300048918 | Bacteria | 1080 |
| 152 | Ga0496115_1079714 | 3300048918 | Bacteria | 609 |
| 153 | Ga0501291_042289 | 3300049514 | Bacteria | 805 |
| 154 | Ga0501298_059636 | 3300049521 | Bacteria | 806 |
| 155 | Ga0501036_0465933 | 3300049572 | Bacteria | 1052 |
| 156 | Ga0501036_1357853 | 3300049572 | Bacteria | 577 |
| 157 | Ga0501039_0105115 | 3300049575 | Bacteria | 2205 |
| 158 | Ga0501042_0898893 | 3300049578 | Bacteria | 645 |
| 159 | Ga0501048_0702087 | 3300049582 | Bacteria | 726 |
| 160 | Ga0501067_0000954 | 3300049583 | Bacteria | 15495 |
| 161 | Ga0501068_0025305 | 3300049584 | Bacteria | 3491 |
| 162 | Ga0501071_0443932 | 3300049587 | Bacteria | 993 |
| 163 | Ga0501072_0212630 | 3300049588 | Bacteria | 1541 |
| 164 | Ga0501072_1443773 | 3300049588 | Bacteria | 532 |
| 165 | Ga0501073_1032049 | 3300049589 | Bacteria | 566 |
| 166 | Ga0501075_0093053 | 3300049591 | Bacteria | 2289 |
| 167 | Ga0501076_0134888 | 3300049592 | Bacteria | 2004 |
| 168 | Ga0501044_0992412 | 3300049823 | Bacteria | 712 |
| 169 | Ga0501045_0031642 | 3300049824 | Bacteria | 3832 |
| 170 | nmdc:mga08y16_891098_c1 | 3300050511 | Bacteria | 876 |
| 171 | Ga0495612_0278657 | 3300053078 | Bacteria | 747 |
| 172 | Ga0495655_0115519 | 3300053083 | Bacteria | 811 |
| 173 | Ga0495619_0514523 | 3300053085 | Bacteria | 823 |
| 174 | Ga0500593_000191 | 3300053117 | Bacteria | 24934 |
| 175 | Ga0530510_0111467 | 3300061734 | Bacteria | 2004 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300025904 | Ga0207647_10796421 | Ga0207647_107964211 | 124 |
| 2 | 3300025942 | Ga0207689_10951009 | Ga0207689_109510092 | 124 |
| 3 | 3300048905 | Ga0496102_1589256 | Ga0496102_1589256_185_562 | 124 |
| 4 | 3300049589 | Ga0501073_1032049 | Ga0501073_1032049_43_417 | 124 |
| 5 | iso_pu_bacteria | 2626541554 | 2626635099 | 124 |
| 6 | iso_pu_bacteria | 8054609563 | 8054610022 | 125 |
| 7 | 3300013105 | Ga0157369_10517854 | Ga0157369_105178542 | 126 |
| 8 | 3300031241 | Ga0265325_10224157 | Ga0265325_102241572 | 126 |
| 9 | 3300031595 | Ga0265313_10065189 | Ga0265313_100651893 | 126 |
| 10 | iso_pu_bacteria | 2527291627 | 2528203278 | 126 |
| 11 | iso_pu_bacteria | 2527291629 | 2528214367 | 126 |
| 12 | iso_pu_bacteria | 2546825537 | 2546947923 | 126 |
| 13 | iso_pu_bacteria | 2576861822 | 2579749738 | 126 |
| 14 | iso_pu_bacteria | 2579778521 | 2579852385 | 126 |
| 15 | iso_pu_bacteria | 2619618881 | 2619855694 | 126 |
| 16 | iso_pu_bacteria | 2619619003 | 2620348143 | 126 |
| 17 | iso_pu_bacteria | 2684623036 | 2686541593 | 126 |
| 18 | iso_pu_bacteria | 2710264753 | 2710605280 | 126 |
| 19 | iso_pu_bacteria | 2773857924 | 2774864396 | 126 |
| 20 | iso_pu_bacteria | 637000116 | 637879726 | 126 |
| 21 | iso_pu_bacteria | 8054913762 | 8054916523 | 126 |
| 22 | 3300005330 | Ga0070690_100616950 | Ga0070690_1006169501 | 128 |
| 23 | 3300006038 | Ga0075365_10026898 | Ga0075365_100268984 | 128 |
| 24 | 3300006038 | Ga0075365_10081839 | Ga0075365_100818393 | 128 |
| 25 | 3300009098 | Ga0105245_10307721 | Ga0105245_103077213 | 128 |
| 26 | 3300009551 | Ga0105238_11895617 | Ga0105238_118956171 | 128 |
| 27 | 3300014326 | Ga0157380_11448850 | Ga0157380_114488501 | 128 |
| 28 | 3300044901 | Ga0466960_0192628 | Ga0466960_0192628_582_968 | 128 |
| 29 | 3300048904 | Ga0496101_0061716 | Ga0496101_0061716_306_692 | 128 |
| 30 | 3300048905 | Ga0496102_0147744 | Ga0496102_0147744_288_674 | 128 |
| 31 | 3300048909 | Ga0496106_0191761 | Ga0496106_0191761_1077_1463 | 128 |
| 32 | 3300048910 | Ga0496107_0232518 | Ga0496107_0232518_24_410 | 128 |
| 33 | 3300048912 | Ga0496109_0922663 | Ga0496109_0922663_226_612 | 128 |
| 34 | 3300003316 | rootH1_10126366 | rootH1_101263662 | 129 |
| 35 | 3300005327 | Ga0070658_10942107 | Ga0070658_109421072 | 129 |
| 36 | 3300005329 | Ga0070683_100010493 | Ga0070683_1000104937 | 129 |
| 37 | 3300005329 | Ga0070683_100016543 | Ga0070683_1000165432 | 129 |
| 38 | 3300005329 | Ga0070683_100782924 | Ga0070683_1007829241 | 129 |
| 39 | 3300005334 | Ga0068869_101201089 | Ga0068869_1012010891 | 129 |
| 40 | 3300005336 | Ga0070680_100289944 | Ga0070680_1002899442 | 129 |
| 41 | 3300005336 | Ga0070680_100374951 | Ga0070680_1003749512 | 129 |
| 42 | 3300005341 | Ga0070691_10619059 | Ga0070691_106190592 | 129 |
| 43 | 3300005344 | Ga0070661_100989026 | Ga0070661_1009890261 | 129 |
| 44 | 3300005347 | Ga0070668_101237503 | Ga0070668_1012375032 | 129 |
| 45 | 3300005366 | Ga0070659_100559042 | Ga0070659_1005590421 | 129 |
| 46 | 3300005366 | Ga0070659_100803312 | Ga0070659_1008033122 | 129 |
| 47 | 3300005445 | Ga0070708_100248736 | Ga0070708_1002487362 | 129 |
| 48 | 3300005455 | Ga0070663_101690702 | Ga0070663_1016907021 | 129 |
| 49 | 3300005455 | Ga0070663_101919079 | Ga0070663_1019190791 | 129 |
| 50 | 3300005535 | Ga0070684_100534413 | Ga0070684_1005344132 | 129 |
| 51 | 3300005563 | Ga0068855_101873387 | Ga0068855_1018733872 | 129 |
| 52 | 3300005577 | Ga0068857_100021725 | Ga0068857_1000217257 | 129 |
| 53 | 3300005578 | Ga0068854_100148338 | Ga0068854_1001483382 | 129 |
| 54 | 3300005615 | Ga0070702_100887323 | Ga0070702_1008873231 | 129 |
| 55 | 3300005718 | Ga0068866_10460082 | Ga0068866_104600822 | 129 |
| 56 | 3300005981 | Ga0081538_10000308 | Ga0081538_1000030812 | 129 |
| 57 | 3300006028 | Ga0070717_10479098 | Ga0070717_104790982 | 129 |
| 58 | 3300006163 | Ga0070715_10076565 | Ga0070715_100765652 | 129 |
| 59 | 3300006175 | Ga0070712_100182221 | Ga0070712_1001822212 | 129 |
| 60 | 3300006881 | Ga0068865_100460039 | Ga0068865_1004600392 | 129 |
| 61 | 3300009094 | Ga0111539_10304176 | Ga0111539_103041764 | 129 |
| 62 | 3300009094 | Ga0111539_10567098 | Ga0111539_105670982 | 129 |
| 63 | 3300009098 | Ga0105245_12418755 | Ga0105245_124187552 | 129 |
| 64 | 3300009545 | Ga0105237_10565107 | Ga0105237_105651072 | 129 |
| 65 | 3300009545 | Ga0105237_10656131 | Ga0105237_106561312 | 129 |
| 66 | 3300010375 | Ga0105239_11111814 | Ga0105239_111118142 | 129 |
| 67 | 3300010375 | Ga0105239_11421141 | Ga0105239_114211412 | 129 |
| 68 | 3300013105 | Ga0157369_10944496 | Ga0157369_109444962 | 129 |
| 69 | 3300013306 | Ga0163162_10248413 | Ga0163162_102484132 | 129 |
| 70 | 3300013307 | Ga0157372_10059918 | Ga0157372_100599182 | 129 |
| 71 | 3300013307 | Ga0157372_10887102 | Ga0157372_108871021 | 129 |
| 72 | 3300013307 | Ga0157372_11886155 | Ga0157372_118861551 | 129 |
| 73 | 3300014497 | Ga0182008_10047573 | Ga0182008_100475732 | 129 |
| 74 | 3300014497 | Ga0182008_10058701 | Ga0182008_100587012 | 129 |
| 75 | 3300014497 | Ga0182008_10117686 | Ga0182008_101176862 | 129 |
| 76 | 3300014745 | Ga0157377_10095379 | Ga0157377_100953792 | 129 |
| 77 | 3300020070 | Ga0206356_10216136 | Ga0206356_102161362 | 129 |
| 78 | 3300020081 | Ga0206354_10591087 | Ga0206354_105910871 | 129 |
| 79 | 3300020082 | Ga0206353_10039145 | Ga0206353_100391452 | 129 |
| 80 | 3300020082 | Ga0206353_10739497 | Ga0206353_107394972 | 129 |
| 81 | 3300020082 | Ga0206353_11695621 | Ga0206353_116956214 | 129 |
| 82 | 3300025899 | Ga0207642_10130433 | Ga0207642_101304332 | 129 |
| 83 | 3300025900 | Ga0207710_10000105 | Ga0207710_1000010572 | 129 |
| 84 | 3300025904 | Ga0207647_10270573 | Ga0207647_102705732 | 129 |
| 85 | 3300025912 | Ga0207707_10668784 | Ga0207707_106687842 | 129 |
| 86 | 3300025914 | Ga0207671_10478623 | Ga0207671_104786232 | 129 |
| 87 | 3300025915 | Ga0207693_10814286 | Ga0207693_108142862 | 129 |
| 88 | 3300025920 | Ga0207649_10872321 | Ga0207649_108723212 | 129 |
| 89 | 3300025921 | Ga0207652_10558262 | Ga0207652_105582622 | 129 |
| 90 | 3300025928 | Ga0207700_10129835 | Ga0207700_101298353 | 129 |
| 91 | 3300025932 | Ga0207690_10722463 | Ga0207690_107224632 | 129 |
| 92 | 3300025941 | Ga0207711_10024820 | Ga0207711_100248203 | 129 |
| 93 | 3300025944 | Ga0207661_10016266 | Ga0207661_100162665 | 129 |
| 94 | 3300025944 | Ga0207661_10212999 | Ga0207661_102129992 | 129 |
| 95 | 3300026078 | Ga0207702_11446229 | Ga0207702_114462292 | 129 |
| 96 | 3300026116 | Ga0207674_10038490 | Ga0207674_100384902 | 129 |
| 97 | 3300026142 | Ga0207698_12075272 | Ga0207698_120752722 | 129 |
| 98 | 3300031251 | Ga0265327_10322104 | Ga0265327_103221042 | 129 |
| 99 | 3300031548 | Ga0307408_101725348 | Ga0307408_1017253481 | 129 |
| 100 | 3300031852 | Ga0307410_10102810 | Ga0307410_101028102 | 129 |
| 101 | 3300031901 | Ga0307406_10219894 | Ga0307406_102198942 | 129 |
| 102 | 3300031901 | Ga0307406_10380421 | Ga0307406_103804212 | 129 |
| 103 | 3300031901 | Ga0307406_10808332 | Ga0307406_108083321 | 129 |
| 104 | 3300031903 | Ga0307407_10051776 | Ga0307407_100517762 | 129 |
| 105 | 3300031903 | Ga0307407_10791096 | Ga0307407_107910962 | 129 |
| 106 | 3300031911 | Ga0307412_10153960 | Ga0307412_101539602 | 129 |
| 107 | 3300031911 | Ga0307412_10436374 | Ga0307412_104363742 | 129 |
| 108 | 3300031911 | Ga0307412_10579435 | Ga0307412_105794352 | 129 |
| 109 | 3300031995 | Ga0307409_100006548 | Ga0307409_1000065485 | 129 |
| 110 | 3300031995 | Ga0307409_100011353 | Ga0307409_1000113533 | 129 |
| 111 | 3300031995 | Ga0307409_100658126 | Ga0307409_1006581262 | 129 |
| 112 | 3300031995 | Ga0307409_100756004 | Ga0307409_1007560042 | 129 |
| 113 | 3300032002 | Ga0307416_100004779 | Ga0307416_1000047798 | 129 |
| 114 | 3300032002 | Ga0307416_100232692 | Ga0307416_1002326922 | 129 |
| 115 | 3300032002 | Ga0307416_100403171 | Ga0307416_1004031712 | 129 |
| 116 | 3300032002 | Ga0307416_100489940 | Ga0307416_1004899402 | 129 |
| 117 | 3300032005 | Ga0307411_10460193 | Ga0307411_104601932 | 129 |
| 118 | 3300032005 | Ga0307411_10807253 | Ga0307411_108072531 | 129 |
| 119 | 3300032126 | Ga0307415_100000214 | Ga0307415_1000002148 | 129 |
| 120 | 3300035083 | Ga0373926_0002485 | Ga0373926_0002485_1266_1658 | 129 |
| 121 | 3300035171 | Ga0373946_0028445 | Ga0373946_0028445_1081_1473 | 129 |
| 122 | 3300035692 | Ga0373935_0000341 | Ga0373935_0000341_7913_8305 | 129 |
| 123 | 3300035725 | Ga0373947_0001989 | Ga0373947_0001989_6158_6550 | 129 |
| 124 | 3300037471 | Ga0395905_0042417 | Ga0395905_0042417_2508_2912 | 129 |
| 125 | 3300037471 | Ga0395905_0247638 | Ga0395905_0247638_467_877 | 129 |
| 126 | 3300038443 | Ga0395901_0014942 | Ga0395901_0014942_2258_2671 | 129 |
| 127 | 3300038443 | Ga0395901_0839937 | Ga0395901_0839937_246_635 | 129 |
| 128 | 3300038443 | Ga0395901_2122456 | Ga0395901_2122456_77_466 | 129 |
| 129 | 3300038996 | Ga0242420_135655 | Ga0242420_135655_141_530 | 129 |
| 130 | 3300041452 | Ga0451793_0485574 | Ga0451793_0485574_42_431 | 129 |
| 131 | 3300041453 | Ga0451797_0279336 | Ga0451797_0279336_367_756 | 129 |
| 132 | 3300041456 | Ga0451795_0002929 | Ga0451795_0002929_95_484 | 129 |
| 133 | 3300041494 | Ga0451837_1412387 | Ga0451837_1412387_286_678 | 129 |
| 134 | 3300041494 | Ga0451837_1519674 | Ga0451837_1519674_10_414 | 129 |
| 135 | 3300041509 | Ga0451843_0520519 | Ga0451843_0520519_491_895 | 129 |
| 136 | 3300041509 | Ga0451843_0852152 | Ga0451843_0852152_92_484 | 129 |
| 137 | 3300042014 | Ga0439457_015733 | Ga0439457_015733_990_1385 | 129 |
| 138 | 3300042145 | Ga0450906_021998 | Ga0450906_021998_103_498 | 129 |
| 139 | 3300042156 | Ga0439446_0011114 | Ga0439446_0011114_798_1193 | 129 |
| 140 | 3300042435 | Ga0439434_0033585 | Ga0439434_0033585_887_1282 | 129 |
| 141 | 3300044693 | Ga0466961_0235050 | Ga0466961_0235050_169_558 | 129 |
| 142 | 3300044694 | Ga0466963_0182041 | Ga0466963_0182041_329_721 | 129 |
| 143 | 3300044694 | Ga0466963_0241314 | Ga0466963_0241314_147_536 | 129 |
| 144 | 3300044765 | Ga0466970_0037292 | Ga0466970_0037292_16_408 | 129 |
| 145 | 3300044765 | Ga0466970_0495177 | Ga0466970_0495177_115_513 | 129 |
| 146 | 3300044901 | Ga0466960_0050388 | Ga0466960_0050388_108_497 | 129 |
| 147 | 3300044901 | Ga0466960_0059015 | Ga0466960_0059015_66_455 | 129 |
| 148 | 3300044901 | Ga0466960_0434848 | Ga0466960_0434848_221_616 | 129 |
| 149 | 3300044901 | Ga0466960_0490096 | Ga0466960_0490096_233_625 | 129 |
| 150 | 3300045976 | Ga0466967_0042421 | Ga0466967_0042421_47_436 | 129 |
| 151 | 3300045976 | Ga0466967_0101387 | Ga0466967_0101387_484_882 | 129 |
| 152 | 3300045976 | Ga0466967_0563428 | Ga0466967_0563428_444_839 | 129 |
| 153 | 3300045976 | Ga0466967_0579005 | Ga0466967_0579005_130_522 | 129 |
| 154 | 3300045976 | Ga0466967_1051591 | Ga0466967_1051591_102_494 | 129 |
| 155 | 3300045976 | Ga0466967_1328582 | Ga0466967_1328582_220_609 | 129 |
| 156 | 3300046477 | Ga0495664_0036577 | Ga0495664_0036577_352_744 | 129 |
| 157 | 3300046511 | Ga0495608_0608086 | Ga0495608_0608086_47_436 | 129 |
| 158 | 3300047319 | Ga0495674_0071366 | Ga0495674_0071366_436_828 | 129 |
| 159 | 3300047321 | Ga0495676_0556795 | Ga0495676_0556795_179_571 | 129 |
| 160 | 3300048903 | Ga0496100_1657165 | Ga0496100_1657165_62_454 | 129 |
| 161 | 3300048907 | Ga0496104_0850620 | Ga0496104_0850620_44_433 | 129 |
| 162 | 3300048912 | Ga0496109_0408152 | Ga0496109_0408152_879_1268 | 129 |
| 163 | 3300048912 | Ga0496109_1522517 | Ga0496109_1522517_122_514 | 129 |
| 164 | 3300048914 | Ga0496111_0591892 | Ga0496111_0591892_404_793 | 129 |
| 165 | 3300048914 | Ga0496111_0979707 | Ga0496111_0979707_175_570 | 129 |
| 166 | 3300048918 | Ga0496115_0422513 | Ga0496115_0422513_602_997 | 129 |
| 167 | 3300048918 | Ga0496115_1079714 | Ga0496115_1079714_142_537 | 129 |
| 168 | 3300049514 | Ga0501291_042289 | Ga0501291_042289_304_771 | 129 |
| 169 | 3300049521 | Ga0501298_059636 | Ga0501298_059636_352_741 | 129 |
| 170 | 3300049572 | Ga0501036_0465933 | Ga0501036_0465933_552_944 | 129 |
| 171 | 3300049572 | Ga0501036_1357853 | Ga0501036_1357853_163_555 | 129 |
| 172 | 3300049575 | Ga0501039_0105115 | Ga0501039_0105115_1492_1884 | 129 |
| 173 | 3300049578 | Ga0501042_0898893 | Ga0501042_0898893_115_525 | 129 |
| 174 | 3300049582 | Ga0501048_0702087 | Ga0501048_0702087_281_673 | 129 |
| 175 | 3300049583 | Ga0501067_0000954 | Ga0501067_0000954_4695_5084 | 129 |
| 176 | 3300049584 | Ga0501068_0025305 | Ga0501068_0025305_2551_2940 | 129 |
| 177 | 3300049587 | Ga0501071_0443932 | Ga0501071_0443932_463_855 | 129 |
| 178 | 3300049588 | Ga0501072_0212630 | Ga0501072_0212630_28_420 | 129 |
| 179 | 3300049588 | Ga0501072_1443773 | Ga0501072_1443773_56_448 | 129 |
| 180 | 3300049591 | Ga0501075_0093053 | Ga0501075_0093053_182_574 | 129 |
| 181 | 3300049592 | Ga0501076_0134888 | Ga0501076_0134888_59_451 | 129 |
| 182 | 3300049823 | Ga0501044_0992412 | Ga0501044_0992412_207_599 | 129 |
| 183 | 3300049824 | Ga0501045_0031642 | Ga0501045_0031642_331_723 | 129 |
| 184 | 3300050511 | nmdc:mga08y16_891098_c1 | nmdc:mga08y16_891098_c1_70_459 | 129 |
| 185 | 3300053078 | Ga0495612_0278657 | Ga0495612_0278657_296_688 | 129 |
| 186 | 3300053083 | Ga0495655_0115519 | Ga0495655_0115519_21_413 | 129 |
| 187 | 3300053085 | Ga0495619_0514523 | Ga0495619_0514523_363_755 | 129 |
| 188 | 3300053117 | Ga0500593_000191 | Ga0500593_000191_11657_12046 | 129 |
| 189 | 3300061734 | Ga0530510_0111467 | Ga0530510_0111467_273_662 | 129 |
| 190 | iso_pu_bacteria | 2811994874 | 2812331378 | 129 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3ush-assembly1.cif.gz_A | crystal structure of the q2s0r5 protein from salinibacter ruber, northeast structural genomics consortium target srr207 | 0.9916 | 4 | 120 |
| 3ush-assembly1.cif.gz_A | crystal structure of the q2s0r5 protein from salinibacter ruber, northeast structural genomics consortium target srr207 | 0.975 | 4 | 120 |
| 4ioh-assembly1.cif.gz_A-2 | crystal structure of the tll1086 protein from thermosynechococcus elongatus, northeast structural genomics consortium target ter258 | 0.8545 | 1 | 119 |
| 4ioh-assembly1.cif.gz_A-2 | crystal structure of the tll1086 protein from thermosynechococcus elongatus, northeast structural genomics consortium target ter258 | 0.8407 | 1 | 119 |
| 2lq3-assembly1.cif.gz_A | solution nmr structure of syc0711_d from synechococcus sp., northeast structural genomics consortium (nesg) target snr212 | 0.5178 | 4 | 121 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 3ushA00 | Alpha Beta;2-Layer Sandwich;Phenylalanyl-tRNA Synthetase; Chain B, domain 1;Protein of unknown function DUF2237 | 0.9879 | 4 | 120 | 3.30.56.110 |
| 3ushA00 | Alpha Beta;2-Layer Sandwich;Phenylalanyl-tRNA Synthetase; Chain B, domain 1;Protein of unknown function DUF2237 | 0.9708 | 4 | 120 | 3.30.56.110 |
| 4iohA00 | Alpha Beta;2-Layer Sandwich;Phenylalanyl-tRNA Synthetase; Chain B, domain 1;Protein of unknown function DUF2237 | 0.8787 | 5 | 119 | 3.30.56.110 |
| 4iohA00 | Alpha Beta;2-Layer Sandwich;Phenylalanyl-tRNA Synthetase; Chain B, domain 1;Protein of unknown function DUF2237 | 0.8497 | 5 | 119 | 3.30.56.110 |
| 2lq3A01 | Mainly Alpha;Orthogonal Bundle;Multidrug-efflux Transporter Regulator; Chain: A; Domain 2; | 0.6624 | 47 | 118 | 1.10.1660.80 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A2V6DHX8-F1-model_v4 | DUF2237 domain-containing protein | 1.01 | 78 | 119 |
|
| AF-A0A348WHA5-F1-model_v4 | DUF2237 domain-containing protein | 1.007 | 70 | 118 |
|
| AF-A0A2V5VJH0-F1-model_v4 | DUF2237 domain-containing protein | 1.005 | 70 | 119 |
|
| AF-K5BGS2-F1-model_v4 | DUF2237 domain-containing protein | 1.001 | 20 | 86 |
|
| AF-A0A2Z5TJP8-F1-model_v4 | deleted | 1 | 1 | 107 |
|
Predicted Structure (AlphaFold2)
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