F293012

General Info

Members Datasets Scaffolds Average Seq Length
190 133 187 465

Family's Representative Sequence

Representative Sequence 3300046542|Ga0495597_0000891|Ga0495597_0000891_15936_17459
Length 498
Sequence MSTPIGHIDVRNLRPVDDAHMTVPYLLCDNHGMNPSAAKSYLPWVVATALFMEQLDSTIVNTAIPAMAASLNVTPLSLKAVVTSYILSLAVAIPISGWMADRFGTRRVFMSAIAIFTFASVLCGLSVNSPMLVAARLLQGVGAAMMMPVGRLTIIRTFPRSELLAAMNFVIIPALIGLIVHWLSWREIFFVNVPVGLAAMFLAHRYMPDYRGDSVRPLDMIGLVLFGTGIALLSWLLEVFGEHKLDVTSASVLLLISCCLLAAYVWHAKEAQFPLLRLALFKIRTFRVSVAGGFITRIGVGGLPFLLPLLYQLGLGLPAWQSGLLMMPAAAAAMGMKFISVRVLARFGYRQVLTINTLLIGLTIGMYTFVGQGTPVYVIVMIGLCLGFFNSLQFSSMNSIAYADIDNADSSMASTIASSMQQLSASFGLAAGSLITGWFLGDLPQSDRLALTSALHHAFIALAVLTLLSSLTFWTLRKEDGEVISKGNASTPVERSGG

Samples

Sample ID Description Type Environment
1 2600255292 Janthinobacterium lividum NFR18 Isolate Rhizoplane
2 2857553236 Duganella sp. R-74557 Isolate Unclassified
3 2919476304 Duganella sp. 3397 Isolate Unclassified
4 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
5 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
6 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
7 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
8 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
9 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
10 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
11 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
12 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
13 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
14 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
15 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
16 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
17 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
18 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
19 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
20 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
21 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
22 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
23 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
26 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
27 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
28 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
31 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
32 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
33 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
34 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
35 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
36 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
37 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
38 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
39 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
40 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
41 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
42 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
43 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
44 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
45 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
46 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
47 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
48 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
49 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
62 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
63 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
65 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
66 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
67 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
68 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
69 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
70 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
71 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
72 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
73 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
74 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
75 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
76 3300044672 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COA3E Metagenome Unclassified
77 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
78 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
79 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
80 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
81 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
82 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
83 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
84 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
85 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
86 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
87 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
88 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
89 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
90 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
91 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
92 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
93 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
94 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
95 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
96 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
97 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
98 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
99 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
100 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
101 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
102 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
103 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
104 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
105 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
106 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
107 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
108 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
109 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
110 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
111 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
112 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
113 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
114 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
115 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
116 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
117 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
118 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
119 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
120 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
121 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
122 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
123 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
124 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
125 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
126 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
127 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
128 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
129 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
130 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
131 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
132 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
133 3300053737 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.42
Metatranscriptomes 0
Isolates 1.58

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.63
Nodule 1.58
Rhizoplane 3.16
Rhizosphere 77.37
Stem 0
Stem Tuber 0
Unclassified 5.26

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25159J45721_1001548 3300002987 Bacteria 9426
2 Ga0055529_1000829 3300003763 Bacteria 18265
3 Ga0055526_1000877 3300003771 Bacteria 22381
4 Ga0055526_1000900 3300003771 Bacteria 22136
5 Ga0055537_1000100 3300003773 Bacteria 64929
6 Ga0055524_1000840 3300003775 Bacteria 20142
7 Ga0055524_1005237 3300003775 Bacteria 5830
8 Ga0055534_1000085 3300003784 Bacteria 72934
9 Ga0055528_1000458 3300003790 Bacteria 32517
10 Ga0065165_1001043 3300005262 Bacteria 33450
11 Ga0070676_10006002 3300005328 Bacteria 6484
12 Ga0070677_10006144 3300005333 Bacteria 3985
13 Ga0070666_10027212 3300005335 Bacteria 3743
14 Ga0070692_10003405 3300005345 Bacteria 6448
15 Ga0070668_100002968 3300005347 Bacteria 12545
16 Ga0070674_100000911 3300005356 Bacteria 15448
17 Ga0070673_100001692 3300005364 Bacteria 13092
18 Ga0070667_100015258 3300005367 Bacteria 6349
19 Ga0070713_100000020 3300005436 Bacteria 108930
20 Ga0070700_100008396 3300005441 Bacteria 5625
21 Ga0070708_100164994 3300005445 Bacteria 2066
22 Ga0070678_100000847 3300005456 Bacteria 15565
23 Ga0068853_100013330 3300005539 Bacteria 6710
24 Ga0070672_100006848 3300005543 Bacteria 7698
25 Ga0070665_100008853 3300005548 Bacteria 10192
26 Ga0070665_100047756 3300005548 Bacteria 4296
27 Ga0068851_10012849 3300005834 Bacteria 3955
28 Ga0068870_10015127 3300005840 Bacteria 3655
29 Ga0068863_100064866 3300005841 Bacteria 3455
30 Ga0068860_100065674 3300005843 Bacteria 3445
31 Ga0070717_10112240 3300006028 Bacteria 2326
32 Ga0068871_100065327 3300006358 Bacteria 2980
33 Ga0099826_10000422 3300006948 Bacteria 20102
34 Ga0105244_10002636 3300009036 Bacteria 13449
35 Ga0105239_10257792 3300010375 Bacteria 1960
36 Ga0157370_10032136 3300013104 Bacteria 5128
37 Ga0163162_10157746 3300013306 Bacteria 2390
38 Ga0182006_1000854 3300015261 Bacteria 20485
39 Ga0182005_1000485 3300015265 Bacteria 20496
40 Ga0213872_10001012 3300021361 Bacteria 19627
41 Ga0213872_10001038 3300021361 Bacteria 19363
42 Ga0213872_10001421 3300021361 Bacteria 15713
43 Ga0213872_10006049 3300021361 Bacteria 6121
44 Ga0209565_1000082 3300025263 Bacteria 154452
45 Ga0209455_1000750 3300025272 Bacteria 18541
46 Ga0209673_1000422 3300025273 Bacteria 73685
47 Ga0209130_1000016 3300025284 Bacteria 395540
48 Ga0209675_1000176 3300025291 Bacteria 73644
49 Ga0209564_1000438 3300025295 Bacteria 71794
50 Ga0209564_1001562 3300025295 Bacteria 22487
51 Ga0209564_1001592 3300025295 Bacteria 22188
52 Ga0209256_1000323 3300025299 Bacteria 82313
53 Ga0209256_1001792 3300025299 Bacteria 20292
54 Ga0207426_1007940 3300025302 Bacteria 4371
55 Ga0209051_1002724 3300025303 Bacteria 12275
56 Ga0207656_10011001 3300025321 Bacteria 3407
57 Ga0207682_10001340 3300025893 Bacteria 11342
58 Ga0207645_10000783 3300025907 Bacteria 26549
59 Ga0207684_10018185 3300025910 Bacteria 6022
60 Ga0207700_10029386 3300025928 Bacteria 3878
61 Ga0207691_10000558 3300025940 Bacteria 37189
62 Ga0207703_10041640 3300026035 Bacteria 3681
63 Ga0207639_10022979 3300026041 Bacteria 4497
64 Ga0207708_10015435 3300026075 Bacteria 5729
65 Ga0207648_10006810 3300026089 Bacteria 11323
66 Ga0207683_10000245 3300026121 Bacteria 48268
67 Ga0209281_1003141 3300027111 Bacteria 5729
68 Ga0209282_1000454 3300027666 Bacteria 20110
69 Ga0268266_10029660 3300028379 Bacteria 4649
70 Ga0307515_10001929 3300028794 Bacteria 46033
71 Ga0265328_10000009 3300031239 Bacteria 179784
72 Ga0265328_10000123 3300031239 Bacteria 37155
73 Ga0265328_10000195 3300031239 Bacteria 28424
74 Ga0265331_10000026 3300031250 Bacteria 223760
75 Ga0265314_10074802 3300031711 Bacteria 2255
76 Ga0307518_10027805 3300031838 Bacteria 4080
77 Ga0373931_0005228 3300035691 Bacteria 5988
78 Ga0373927_0032120 3300035695 Bacteria 3419
79 Ga0395899_0001625 3300037312 Bacteria 18793
80 Ga0395898_0010860 3300037466 Bacteria 9510
81 Ga0395905_0002304 3300037471 Bacteria 21385
82 Ga0395905_0002777 3300037471 Bacteria 19182
83 Ga0395905_0128379 3300037471 Bacteria 2384
84 Ga0395901_0016892 3300038443 Bacteria 7439
85 Ga0395901_0133806 3300038443 Bacteria 2605
86 Ga0395901_0244815 3300038443 Bacteria 1869
87 Ga0436361_0215595 3300039447 Bacteria 11004
88 Ga0436361_0320638 3300039447 Bacteria 4176
89 Ga0436361_0358705 3300039447 Bacteria 17052
90 Ga0436361_0463751 3300039447 Bacteria 19403
91 Ga0436361_0750264 3300039447 Bacteria 19455
92 Ga0466982_0048407 3300044672 Bacteria 2595
93 Ga0466965_0004398 3300044683 Bacteria 6264
94 Ga0466968_0001186 3300044735 Bacteria 9227
95 Ga0495617_000043 3300046452 Bacteria 121136
96 Ga0495627_000870 3300046453 Bacteria 21435
97 Ga0495590_0000382 3300046457 Bacteria 22518
98 Ga0495638_0001370 3300046460 Bacteria 22328
99 Ga0495650_0001777 3300046471 Bacteria 19562
100 Ga0495650_0001826 3300046471 Bacteria 19087
101 Ga0495605_0000802 3300046474 Bacteria 22441
102 Ga0495605_0019161 3300046474 Bacteria 3660
103 Ga0495584_0000116 3300046491 Bacteria 54741
104 Ga0495596_0001360 3300046500 Bacteria 14087
105 Ga0495607_0000906 3300046501 Bacteria 27598
106 Ga0495607_0001294 3300046501 Bacteria 22348
107 Ga0495583_0000264 3300046506 Bacteria 86123
108 Ga0495583_0001587 3300046506 Bacteria 22385
109 Ga0495583_0005262 3300046506 Bacteria 8866
110 Ga0495606_0002177 3300046507 Bacteria 23548
111 Ga0495606_0002577 3300046507 Bacteria 20765
112 Ga0495606_0002909 3300046507 Bacteria 18926
113 Ga0495606_0015173 3300046507 Bacteria 5955
114 Ga0495606_0034212 3300046507 Bacteria 3490
115 Ga0495616_0002352 3300046513 Bacteria 12596
116 Ga0495632_0000362 3300046519 Bacteria 43114
117 Ga0495637_0000696 3300046520 Bacteria 23131
118 Ga0495643_0001402 3300046522 Bacteria 22388
119 Ga0495648_0001548 3300046524 Bacteria 22454
120 Ga0495648_0013213 3300046524 Bacteria 6120
121 Ga0495642_0046616 3300046528 Bacteria 1773
122 Ga0495654_0063542 3300046530 Bacteria 1767
123 Ga0495609_0000190 3300046538 Bacteria 61573
124 Ga0495609_0005094 3300046538 Bacteria 7004
125 Ga0495609_0011995 3300046538 Bacteria 4114
126 Ga0495609_0027265 3300046538 Bacteria 2611
127 Ga0495597_0000891 3300046542 Bacteria 23259
128 Ga0495597_0000937 3300046542 Bacteria 22509
129 Ga0495622_0000393 3300046557 Bacteria 29591
130 Ga0495622_0000554 3300046557 Bacteria 22441
131 Ga0495633_0000914 3300046558 Bacteria 25035
132 Ga0495633_0001052 3300046558 Bacteria 22514
133 Ga0495633_0025372 3300046558 Bacteria 2919
134 Ga0495668_0001086 3300046616 Bacteria 28354
135 Ga0495668_0002082 3300046616 Bacteria 17326
136 Ga0495625_0001543 3300046660 Bacteria 27489
137 Ga0495625_0002064 3300046660 Bacteria 22515
138 Ga0495625_0014116 3300046660 Bacteria 6392
139 Ga0495659_0000322 3300046664 Bacteria 18883
140 Ga0495659_0004312 3300046664 Bacteria 4482
141 Ga0495659_0008056 3300046664 Bacteria 3345
142 Ga0495661_0026680 3300046665 Bacteria 3718
143 Ga0495588_0008210 3300046674 Bacteria 4781
144 Ga0495671_0001117 3300046692 Bacteria 18541
145 Ga0495671_0006075 3300046692 Bacteria 7014
146 Ga0495649_0014152 3300046694 Bacteria 4581
147 Ga0495649_0064047 3300046694 Bacteria 1975
148 Ga0495649_0070971 3300046694 Bacteria 1867
149 Ga0495660_0000945 3300046810 Bacteria 21262
150 Ga0495660_0001178 3300046810 Bacteria 18436
151 Ga0495660_0004275 3300046810 Bacteria 8661
152 Ga0495660_0005985 3300046810 Bacteria 7236
153 Ga0495636_0023732 3300047318 Bacteria 2484
154 Ga0495672_0001546 3300047320 Bacteria 22492
155 Ga0495672_0002076 3300047320 Bacteria 18808
156 Ga0495687_001871 3300047443 Bacteria 18235
157 Ga0495687_023765 3300047443 Bacteria 2923
158 Ga0495677_0004913 3300047445 Bacteria 5095
159 Ga0495679_023518 3300047446 Bacteria 2089
160 Ga0495685_001202 3300047447 Bacteria 7936
161 Ga0495681_0000765 3300047470 Bacteria 24788
162 Ga0495686_0001966 3300047472 Bacteria 20417
163 Ga0495686_0070029 3300047472 Bacteria 2161
164 Ga0496102_0000279 3300048905 Bacteria 65185
165 Ga0496102_0012147 3300048905 Bacteria 7443
166 Ga0496103_0000851 3300048906 Bacteria 22321
167 Ga0496103_0017295 3300048906 Bacteria 4314
168 Ga0496110_0008892 3300048913 Bacteria 8096
169 Ga0496117_0000056 3300048920 Bacteria 271417
170 Ga0496118_0000047 3300048921 Bacteria 271417
171 Ga0496121_0027074 3300048924 Bacteria 5376
172 Ga0496124_0011867 3300048927 Bacteria 8675
173 Ga0496124_0205996 3300048927 Bacteria 1492
174 Ga0495678_001109 3300049459 Bacteria 22514
175 Ga0495678_001122 3300049459 Bacteria 22230
176 Ga0495678_001192 3300049459 Bacteria 21381
177 Ga0495678_003832 3300049459 Bacteria 9054
178 Ga0495678_028916 3300049459 Bacteria 2332
179 Ga0495682_0002691 3300049460 Bacteria 8265
180 Ga0501068_0004800 3300049584 Bacteria 7357
181 Ga0501070_0041371 3300049586 Bacteria 3840
182 Ga0501073_0016686 3300049589 Bacteria 5320
183 Ga0501074_0041318 3300049590 Bacteria 3339
184 Ga0501080_0016213 3300049742 Bacteria 6879
185 Ga0501269_000160 3300049766 Bacteria 20697
186 Ga0500594_0018027 3300053118 Bacteria 1734
187 Ga0500601_001322 3300053737 Bacteria 2734

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300053118 Ga0500594_0018027 Ga0500594_0018027_449_1717 410
2 3300049459 Ga0495678_001122 Ga0495678_001122_20312_21751 416
3 3300046692 Ga0495671_0006075 Ga0495671_0006075_5132_6532 419
4 3300046694 Ga0495649_0064047 Ga0495649_0064047_55_1455 419
5 3300006028 Ga0070717_10112240 Ga0070717_101122402 425
6 3300046507 Ga0495606_0002909 Ga0495606_0002909_841_2742 427
7 3300037466 Ga0395898_0010860 Ga0395898_0010860_7600_9024 428
8 3300047472 Ga0495686_0070029 Ga0495686_0070029_222_1673 428
9 3300048906 Ga0496103_0000851 Ga0496103_0000851_5338_6750 429
10 3300037312 Ga0395899_0001625 Ga0395899_0001625_5056_6522 431
11 3300037471 Ga0395905_0128379 Ga0395905_0128379_128_1594 431
12 3300038443 Ga0395901_0133806 Ga0395901_0133806_521_1987 431
13 3300038443 Ga0395901_0016892 Ga0395901_0016892_4588_6111 432
14 3300039447 Ga0436361_0463751 Ga0436361_0463751_15225_16655 433
15 3300048905 Ga0496102_0000279 Ga0496102_0000279_63608_65041 435
16 3300047320 Ga0495672_0001546 Ga0495672_0001546_1009_2385 436
17 3300048927 Ga0496124_0205996 Ga0496124_0205996_79_1443 437
18 3300003771 Ga0055526_1000900 Ga0055526_10009005 442
19 3300025295 Ga0209564_1001592 Ga0209564_100159216 442
20 3300003771 Ga0055526_1000877 Ga0055526_10008775 443
21 3300025295 Ga0209564_1001562 Ga0209564_100156217 443
22 3300031711 Ga0265314_10074802 Ga0265314_100748022 443
23 3300003775 Ga0055524_1000840 Ga0055524_100084019 447
24 3300006948 Ga0099826_10000422 Ga0099826_1000042219 447
25 3300025299 Ga0209256_1001792 Ga0209256_100179219 447
26 3300027666 Ga0209282_1000454 Ga0209282_100045419 447
27 3300046530 Ga0495654_0063542 Ga0495654_0063542_10_1422 448
28 3300046664 Ga0495659_0000322 Ga0495659_0000322_14520_15932 448
29 3300046692 Ga0495671_0001117 Ga0495671_0001117_14335_15747 448
30 3300047320 Ga0495672_0002076 Ga0495672_0002076_2846_4258 448
31 3300046457 Ga0495590_0000382 Ga0495590_0000382_16286_17689 449
32 3300046460 Ga0495638_0001370 Ga0495638_0001370_16095_17498 449
33 3300046471 Ga0495650_0001777 Ga0495650_0001777_2099_3502 449
34 3300046474 Ga0495605_0000802 Ga0495605_0000802_5245_6702 449
35 3300046506 Ga0495583_0001587 Ga0495583_0001587_4876_6279 449
36 3300046522 Ga0495643_0001402 Ga0495643_0001402_4871_6274 449
37 3300046524 Ga0495648_0001548 Ga0495648_0001548_4831_6234 449
38 3300046538 Ga0495609_0011995 Ga0495609_0011995_1652_3055 449
39 3300046542 Ga0495597_0000937 Ga0495597_0000937_4871_6274 449
40 3300046557 Ga0495622_0000554 Ga0495622_0000554_16236_17639 449
41 3300046558 Ga0495633_0001052 Ga0495633_0001052_4831_6234 449
42 3300046616 Ga0495668_0002082 Ga0495668_0002082_4834_6237 449
43 3300046660 Ga0495625_0002064 Ga0495625_0002064_16095_17498 449
44 3300047443 Ga0495687_001871 Ga0495687_001871_11936_13339 449
45 3300049459 Ga0495678_001109 Ga0495678_001109_16281_17684 449
46 3300049459 Ga0495678_028916 Ga0495678_028916_901_2304 449
47 3300031838 Ga0307518_10027805 Ga0307518_100278051 452
48 iso_pu_bacteria 2600255292 2601672116 452
49 3300010375 Ga0105239_10257792 Ga0105239_102577921 453
50 3300037471 Ga0395905_0002304 Ga0395905_0002304_9704_11113 453
51 3300044672 Ga0466982_0048407 Ga0466982_0048407_1121_2578 453
52 3300046664 Ga0495659_0008056 Ga0495659_0008056_165_1595 453
53 3300031239 Ga0265328_10000123 Ga0265328_1000012310 454
54 3300031250 Ga0265331_10000026 Ga0265331_1000002633 454
55 3300046491 Ga0495584_0000116 Ga0495584_0000116_49464_50942 454
56 3300046528 Ga0495642_0046616 Ga0495642_0046616_45_1478 454
57 3300046674 Ga0495588_0008210 Ga0495588_0008210_2574_4013 454
58 3300005345 Ga0070692_10003405 Ga0070692_100034055 455
59 3300005441 Ga0070700_100008396 Ga0070700_1000083963 455
60 3300005548 Ga0070665_100008853 Ga0070665_1000088531 455
61 3300009036 Ga0105244_10002636 Ga0105244_100026364 455
62 3300013104 Ga0157370_10032136 Ga0157370_100321363 455
63 3300026075 Ga0207708_10015435 Ga0207708_100154353 455
64 3300028379 Ga0268266_10029660 Ga0268266_100296603 455
65 3300028794 Ga0307515_10001929 Ga0307515_100019298 455
66 3300031239 Ga0265328_10000009 Ga0265328_100000097 455
67 3300044683 Ga0466965_0004398 Ga0466965_0004398_249_1667 455
68 3300044735 Ga0466968_0001186 Ga0466968_0001186_6115_7533 455
69 3300046501 Ga0495607_0001294 Ga0495607_0001294_4798_6201 455
70 3300046506 Ga0495583_0000264 Ga0495583_0000264_83751_85184 455
71 3300046507 Ga0495606_0002177 Ga0495606_0002177_5822_7225 455
72 3300046507 Ga0495606_0002577 Ga0495606_0002577_15997_17412 455
73 3300046520 Ga0495637_0000696 Ga0495637_0000696_5732_7147 455
74 3300046524 Ga0495648_0013213 Ga0495648_0013213_370_1773 455
75 3300046557 Ga0495622_0000393 Ga0495622_0000393_2099_3532 455
76 3300046558 Ga0495633_0025372 Ga0495633_0025372_50_1462 455
77 3300046660 Ga0495625_0014116 Ga0495625_0014116_3368_4780 455
78 3300048905 Ga0496102_0012147 Ga0496102_0012147_3391_4827 455
79 3300048906 Ga0496103_0017295 Ga0496103_0017295_1146_2582 455
80 3300049584 Ga0501068_0004800 Ga0501068_0004800_4740_6155 455
81 3300049586 Ga0501070_0041371 Ga0501070_0041371_328_1743 455
82 3300049589 Ga0501073_0016686 Ga0501073_0016686_2724_4139 455
83 3300049590 Ga0501074_0041318 Ga0501074_0041318_541_1956 455
84 3300049742 Ga0501080_0016213 Ga0501080_0016213_725_2140 455
85 3300049766 Ga0501269_000160 Ga0501269_000160_4087_5499 455
86 3300053737 Ga0500601_001322 Ga0500601_001322_805_2253 455
87 3300003763 Ga0055529_1000829 Ga0055529_10008293 456
88 3300015261 Ga0182006_1000854 Ga0182006_10008545 456
89 3300015265 Ga0182005_1000485 Ga0182005_10004855 456
90 3300021361 Ga0213872_10001012 Ga0213872_100010124 456
91 3300021361 Ga0213872_10001038 Ga0213872_100010384 456
92 3300021361 Ga0213872_10001421 Ga0213872_100014211 456
93 3300021361 Ga0213872_10006049 Ga0213872_100060493 456
94 3300025272 Ga0209455_1000750 Ga0209455_10007503 456
95 3300025303 Ga0209051_1002724 Ga0209051_10027247 456
96 3300027111 Ga0209281_1003141 Ga0209281_10031412 456
97 3300035691 Ga0373931_0005228 Ga0373931_0005228_1978_3390 456
98 3300039447 Ga0436361_0215595 Ga0436361_0215595_7983_9392 456
99 3300039447 Ga0436361_0320638 Ga0436361_0320638_56_1453 456
100 3300039447 Ga0436361_0358705 Ga0436361_0358705_165_1562 456
101 3300046452 Ga0495617_000043 Ga0495617_000043_116548_118002 456
102 3300046471 Ga0495650_0001826 Ga0495650_0001826_16147_17574 456
103 3300046474 Ga0495605_0019161 Ga0495605_0019161_914_2368 456
104 3300046500 Ga0495596_0001360 Ga0495596_0001360_11957_13408 456
105 3300046501 Ga0495607_0000906 Ga0495607_0000906_2468_3862 456
106 3300046506 Ga0495583_0005262 Ga0495583_0005262_7038_8432 456
107 3300046507 Ga0495606_0034212 Ga0495606_0034212_580_2007 456
108 3300046513 Ga0495616_0002352 Ga0495616_0002352_3953_5347 456
109 3300046519 Ga0495632_0000362 Ga0495632_0000362_40963_42414 456
110 3300046538 Ga0495609_0000190 Ga0495609_0000190_19680_21074 456
111 3300046538 Ga0495609_0027265 Ga0495609_0027265_983_2437 456
112 3300046558 Ga0495633_0000914 Ga0495633_0000914_8910_10382 456
113 3300046660 Ga0495625_0001543 Ga0495625_0001543_4012_5406 456
114 3300046664 Ga0495659_0004312 Ga0495659_0004312_129_1523 456
115 3300046665 Ga0495661_0026680 Ga0495661_0026680_1328_2722 456
116 3300046694 Ga0495649_0014152 Ga0495649_0014152_1499_2893 456
117 3300046810 Ga0495660_0004275 Ga0495660_0004275_616_2067 456
118 3300046810 Ga0495660_0005985 Ga0495660_0005985_1286_2680 456
119 3300047318 Ga0495636_0023732 Ga0495636_0023732_441_1835 456
120 3300047443 Ga0495687_023765 Ga0495687_023765_676_2070 456
121 3300047445 Ga0495677_0004913 Ga0495677_0004913_2993_4387 456
122 3300047446 Ga0495679_023518 Ga0495679_023518_632_2026 456
123 3300047447 Ga0495685_001202 Ga0495685_001202_3455_4849 456
124 3300047470 Ga0495681_0000765 Ga0495681_0000765_20311_21705 456
125 3300048920 Ga0496117_0000056 Ga0496117_0000056_14807_16279 456
126 3300048921 Ga0496118_0000047 Ga0496118_0000047_255139_256611 456
127 3300048927 Ga0496124_0011867 Ga0496124_0011867_2025_3527 456
128 3300049459 Ga0495678_003832 Ga0495678_003832_6629_8080 456
129 3300049460 Ga0495682_0002691 Ga0495682_0002691_5489_6961 456
130 iso_pu_bacteria 2857553236 2857558620 456
131 iso_pu_bacteria 2919476304 2919481461 456
132 3300005436 Ga0070713_100000020 Ga0070713_10000002073 457
133 3300005445 Ga0070708_100164994 Ga0070708_1001649942 457
134 3300025910 Ga0207684_10018185 Ga0207684_100181855 457
135 3300025928 Ga0207700_10029386 Ga0207700_100293862 457
136 3300035695 Ga0373927_0032120 Ga0373927_0032120_900_2345 457
137 3300046507 Ga0495606_0015173 Ga0495606_0015173_1980_3389 457
138 3300046538 Ga0495609_0005094 Ga0495609_0005094_2693_4102 457
139 3300046542 Ga0495597_0000891 Ga0495597_0000891_15936_17459 457
140 3300046810 Ga0495660_0001178 Ga0495660_0001178_2906_4315 457
141 3300002987 JGI25159J45721_1001548 JGI25159J45721_10015481 458
142 3300003773 Ga0055537_1000100 Ga0055537_10001002 458
143 3300003775 Ga0055524_1005237 Ga0055524_10052372 458
144 3300003784 Ga0055534_1000085 Ga0055534_10000852 458
145 3300003790 Ga0055528_1000458 Ga0055528_100045827 458
146 3300005262 Ga0065165_1001043 Ga0065165_100104328 458
147 3300005328 Ga0070676_10006002 Ga0070676_100060029 458
148 3300005333 Ga0070677_10006144 Ga0070677_100061443 458
149 3300005335 Ga0070666_10027212 Ga0070666_100272126 458
150 3300005347 Ga0070668_100002968 Ga0070668_10000296814 458
151 3300005356 Ga0070674_100000911 Ga0070674_1000009116 458
152 3300005364 Ga0070673_100001692 Ga0070673_10000169213 458
153 3300005367 Ga0070667_100015258 Ga0070667_1000152582 458
154 3300005456 Ga0070678_100000847 Ga0070678_1000008479 458
155 3300005539 Ga0068853_100013330 Ga0068853_1000133309 458
156 3300005543 Ga0070672_100006848 Ga0070672_1000068484 458
157 3300005548 Ga0070665_100047756 Ga0070665_1000477566 458
158 3300005834 Ga0068851_10012849 Ga0068851_100128492 458
159 3300005840 Ga0068870_10015127 Ga0068870_100151276 458
160 3300005841 Ga0068863_100064866 Ga0068863_1000648664 458
161 3300005843 Ga0068860_100065674 Ga0068860_1000656746 458
162 3300006358 Ga0068871_100065327 Ga0068871_1000653273 458
163 3300013306 Ga0163162_10157746 Ga0163162_101577461 458
164 3300025263 Ga0209565_1000082 Ga0209565_10000822 458
165 3300025273 Ga0209673_1000422 Ga0209673_100042262 458
166 3300025284 Ga0209130_1000016 Ga0209130_1000016257 458
167 3300025291 Ga0209675_1000176 Ga0209675_100017661 458
168 3300025295 Ga0209564_1000438 Ga0209564_100043861 458
169 3300025299 Ga0209256_1000323 Ga0209256_10003232 458
170 3300025302 Ga0207426_1007940 Ga0207426_10079402 458
171 3300025321 Ga0207656_10011001 Ga0207656_100110014 458
172 3300025893 Ga0207682_10001340 Ga0207682_1000134013 458
173 3300025907 Ga0207645_10000783 Ga0207645_1000078313 458
174 3300025940 Ga0207691_10000558 Ga0207691_1000055816 458
175 3300026035 Ga0207703_10041640 Ga0207703_100416406 458
176 3300026041 Ga0207639_10022979 Ga0207639_100229792 458
177 3300026089 Ga0207648_10006810 Ga0207648_1000681014 458
178 3300026121 Ga0207683_10000245 Ga0207683_100002459 458
179 3300031239 Ga0265328_10000195 Ga0265328_1000019535 458
180 3300037471 Ga0395905_0002777 Ga0395905_0002777_6698_8146 458
181 3300038443 Ga0395901_0244815 Ga0395901_0244815_142_1605 458
182 3300039447 Ga0436361_0750264 Ga0436361_0750264_2750_4228 458
183 3300046453 Ga0495627_000870 Ga0495627_000870_4335_5852 458
184 3300046616 Ga0495668_0001086 Ga0495668_0001086_20973_22373 458
185 3300046694 Ga0495649_0070971 Ga0495649_0070971_114_1571 458
186 3300046810 Ga0495660_0000945 Ga0495660_0000945_4387_5895 458
187 3300047472 Ga0495686_0001966 Ga0495686_0001966_2223_3623 458
188 3300048913 Ga0496110_0008892 Ga0496110_0008892_333_1766 458
189 3300048924 Ga0496121_0027074 Ga0496121_0027074_2958_4388 458
190 3300049459 Ga0495678_001192 Ga0495678_001192_4338_5846 458

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07690

MFS_1

Major Facilitator Superfamily

46

429

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
7y58-assembly1.cif.gz_A cryoem structure of qaca (d411n), an antibacterial efflux transporter from staphylococcus aureus 0.8535 1 448
7y58-assembly1.cif.gz_A cryoem structure of qaca (d411n), an antibacterial efflux transporter from staphylococcus aureus 0.8345 1 448
7d5p-assembly1.cif.gz_A structure of norc transporter in an outward-open conformation in complex with a single-chain indian camelid antibody 0.8289 11 445
7d5p-assembly2.cif.gz_B structure of norc transporter in an outward-open conformation in complex with a single-chain indian camelid antibody 0.8277 12 445
7d5q-assembly1.cif.gz_A structure of norc transporter (k398a mutant) in an outward-open conformation in complex with a single-chain indian camelid antibody 0.826 12 445
ID Description Score Start End Superfamily
af_P31474_257_457_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9562 251 453 1.20.1250.20
af_P31474_257_457_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9424 251 453 1.20.1250.20
af_P36554_255_462_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9401 249 450 1.20.1250.20
af_P36554_12_217_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9309 14 209 1.20.1250.20
af_P31474_14_249_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9228 14 242 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A3S4FUL1-F1-model_v4 High-copy suppressor of rspA 0.9516 165 453 GO:0016020
GO:0022857
AF-A0A1L6TBM3-F1-model_v4 MFS transporter 0.9432 1 454 GO:0016020
GO:0022857
AF-A0A2V6Z468-F1-model_v4 MFS transporter 0.9419 1 457 GO:0005886
GO:0022857
AF-A0A2V6Z468-F1-model_v4 MFS transporter 0.9379 1 457 GO:0005886
GO:0022857
AF-A0A1H5MDJ6-F1-model_v4 Drug resistance transporter, EmrB/QacA subfamily 0.9378 8 449 GO:0005886
GO:0022857

Feature Viewer

pLDDT pTM Quality
83.29 0.8 High
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Predicted Structure (AlphaFold2)

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