F292465

General Info

Members Datasets Scaffolds Average Seq Length
190 130 182 1063

Family's Representative Sequence

Representative Sequence 3300009551|Ga0105238_10033443|Ga0105238_100334432
Length 1122
Sequence MRLISSASRLTLSASVIALGAAWSAPAFAQNSNPVTPTEAQQCSKLPTPQEQALCAQGAAQPEGTAAQSGDIATLPPQQVEKNKAQSGAIVVTGSRIRSSPYTSPDPITVINPDLERKGGASSTAELLQENPVAAGSFQITDVISAGNFVNNGGPGVETISLRGLGASRTLVLVNGRRAGPAGTRGAIDGFDLNVLPSTIIQSIDILKTGASSIYGSDAVAGVVNLHTKTATDGLVVRGFSSTPFKSGGGTWDVSGAWGKEFSRGHILVAVDYTHRDRLKQSDRDYLNCSTENLFDSQGFRHDVVDPRTGKPRCVGAIQNMLLFQDVGFGLPTTPNGNPFDVVQFNNPGDNLDQFLPPVNDPEIGFTAPPGFFGLPDFCATVNPLTGNPRPATAADEKLCNTALGLENQFSAVDSNSDVSPKLNRYTIWADASYELTDHIEAYTELLYNRRKTDFVGSRQLFFTMFPGNSDFTVRQGKVVGLPFFFCDPSVNNCNPFEAGDPFNSFTGVTVFDPVVEIPTGNQTDVKYTRGVGGLRGDFGPNFLAGNWHYDAYFQYSHSDGDYTNDIVFQDAVDSQELRTHSCAGTVTRIRGVPCIDIDWTDPRILAGDFTPAEKAFLFGKDTGNTVYNQLTGEASVSGDVVHLPAGPVGIALGVQWRKDSIDDTPGPVTAAGNVWGQSVSDPTRGHSITKEAFGEIQVPLIHNTPFIQDLNFSGAARLTDVTATQKAFTITDPDGTQRQVLPLSNSSKGNWTYKLGLNWQTNEWLRFRATMGTSYRAPALFEQFLGNTTSFPTQLSIDPCINWGRALAQNTLSQRVADNCASLGIPATYGGAGSSAVAFSSGGIGHLKPETSKAKTFSVVVTPLEGFWSGNRWSLAVDYFDIKVKGEISQLGPARIVSTCLNSPDFPNDPTCALFDRNPPTGPGANNITEIRDQFINISSEVNRGVDLTAQMTQDFGSWGKLAALAQMTWSIKDNTTLFKGSTTTAEGTAGEPKWVGNFKFTWAKGPWTAFWGLDVIGGTSDEQNLRDFLGGTVCIHSALRDAEVCPIFRLKPQFYHNVSLTRDIGDRFEITAGISNLFDRKPPLVSNADAVISSIGNAPIFGTQYDLIGRRAFVSVQAKF

Samples

Sample ID Description Type Environment
1 2585428106 Caulobacter sp. OV484 Isolate Rhizosphere
2 2643221640 Caulobacter sp. Root342 Isolate Unclassified
3 2643221642 Caulobacter sp. Root343 Isolate Unclassified
4 2643221663 Brevundimonas sp. Root1279 Isolate Unclassified
5 2928531327 Caulobacter sp. 1776 Isolate Rhizosphere
6 2928972540 Brevundimonas sp. 1080 Isolate Rhizosphere
7 2977240413 Brevundimonas vesicularis SORGH_AS 431 Isolate Unclassified
8 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
9 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
10 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
11 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
12 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
13 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
14 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
15 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
16 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
17 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
18 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
19 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
20 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
21 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
22 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
23 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
24 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
25 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
28 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
31 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
36 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
37 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
38 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
39 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
40 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
42 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
43 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
44 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
45 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
46 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
47 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
48 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
49 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
50 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
51 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
52 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
53 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
54 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
55 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
86 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
87 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
88 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
89 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
90 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
91 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
92 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
93 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
94 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
95 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
96 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
97 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
98 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
99 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
100 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
101 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
102 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
103 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
104 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
105 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
106 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
107 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
108 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
109 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
110 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
111 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
112 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
113 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
114 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
115 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
116 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
117 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
118 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
119 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
120 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
122 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
123 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
124 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
125 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
126 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
127 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
128 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
129 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
130 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.79
Metatranscriptomes 0
Isolates 4.21

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.11
Nodule 0
Rhizoplane 1.58
Rhizosphere 91.58
Stem 0
Stem Tuber 0
Unclassified 4.74

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24741J21665_1000772 3300001915 Bacteria 9615
2 JGI24737J22298_10001108 3300001990 Bacteria 9475
3 rootL2_10119460 3300003322 Bacteria 3722
4 Ga0070658_10000131 3300005327 Bacteria 66294
5 Ga0070658_10005347 3300005327 Bacteria 10427
6 Ga0070676_10010573 3300005328 Bacteria 5007
7 Ga0070683_100012416 3300005329 Bacteria 7403
8 Ga0070666_10000163 3300005335 Bacteria 45399
9 Ga0070682_100008461 3300005337 Bacteria 5807
10 Ga0070660_100000864 3300005339 Bacteria 20198
11 Ga0070660_100023910 3300005339 Bacteria 4531
12 Ga0070661_100000075 3300005344 Bacteria 79164
13 Ga0070661_100022877 3300005344 Bacteria 4476
14 Ga0070675_100004138 3300005354 Bacteria 11020
15 Ga0070671_100002805 3300005355 Bacteria 13539
16 Ga0070671_100007812 3300005355 Bacteria 8546
17 Ga0070671_100025466 3300005355 Bacteria 4854
18 Ga0070673_100007275 3300005364 Bacteria 7288
19 Ga0070659_100000126 3300005366 Bacteria 57730
20 Ga0070659_100013142 3300005366 Bacteria 6156
21 Ga0070667_100001318 3300005367 Bacteria 22299
22 Ga0070667_100008225 3300005367 Bacteria 8648
23 Ga0070667_100025651 3300005367 Bacteria 4901
24 Ga0070663_100000529 3300005455 Bacteria 20183
25 Ga0070663_100004548 3300005455 Bacteria 8174
26 Ga0070663_100006165 3300005455 Bacteria 7183
27 Ga0070678_100000076 3300005456 Bacteria 37213
28 Ga0070662_100000121 3300005457 Bacteria 43769
29 Ga0070662_100018158 3300005457 Bacteria 4754
30 Ga0070684_100037088 3300005535 Bacteria 4179
31 Ga0068853_100000078 3300005539 Bacteria 67253
32 Ga0068853_100038333 3300005539 Bacteria 4081
33 Ga0070693_100001557 3300005547 Bacteria 10365
34 Ga0070693_100008732 3300005547 Bacteria 5015
35 Ga0068855_100002294 3300005563 Bacteria 23633
36 Ga0070664_100000671 3300005564 Bacteria 26126
37 Ga0070664_100009718 3300005564 Bacteria 7798
38 Ga0070664_100018093 3300005564 Bacteria 5785
39 Ga0068857_100030014 3300005577 Bacteria 4797
40 Ga0068856_100000538 3300005614 Bacteria 41802
41 Ga0068856_100011526 3300005614 Bacteria 8577
42 Ga0068856_100012324 3300005614 Bacteria 8278
43 Ga0068852_100003893 3300005616 Bacteria 10489
44 Ga0068852_100011572 3300005616 Bacteria 6652
45 Ga0068852_100020689 3300005616 Bacteria 5235
46 Ga0068852_100022853 3300005616 Bacteria 5023
47 Ga0068859_100013333 3300005617 Bacteria 8245
48 Ga0068864_100005320 3300005618 Bacteria 10545
49 Ga0068858_100000423 3300005842 Bacteria 44051
50 Ga0068860_100016078 3300005843 Bacteria 7299
51 Ga0075366_10007230 3300006195 Bacteria 6117
52 Ga0068871_100014172 3300006358 Bacteria 5934
53 Ga0097620_100013333 3300006931 Bacteria 8245
54 Ga0105243_10001076 3300009148 Bacteria 25020
55 Ga0105241_10008998 3300009174 Bacteria 7343
56 Ga0105248_10000443 3300009177 Bacteria 47083
57 Ga0105248_10003809 3300009177 Bacteria 16725
58 Ga0105248_10031629 3300009177 Bacteria 5912
59 Ga0105248_10039705 3300009177 Bacteria 5275
60 Ga0105237_10028039 3300009545 Bacteria 5737
61 Ga0105238_10023712 3300009551 Bacteria 6254
62 Ga0105238_10033443 3300009551 Bacteria 5234
63 Ga0105246_10004834 3300011119 Bacteria 8207
64 Ga0157373_10010046 3300013100 Bacteria 6974
65 Ga0157373_10013494 3300013100 Bacteria 5992
66 Ga0157371_10000097 3300013102 Bacteria 134150
67 Ga0157371_10003312 3300013102 Bacteria 14734
68 Ga0157371_10006748 3300013102 Bacteria 9385
69 Ga0157370_10027146 3300013104 Bacteria 5646
70 Ga0157370_10037613 3300013104 Bacteria 4691
71 Ga0157369_10001278 3300013105 Bacteria 31275
72 Ga0157369_10004227 3300013105 Bacteria 17007
73 Ga0157369_10027880 3300013105 Bacteria 6256
74 Ga0157369_10037239 3300013105 Bacteria 5326
75 Ga0163162_10008254 3300013306 Bacteria 10165
76 Ga0157372_10037064 3300013307 Bacteria 5376
77 Ga0157375_10006683 3300013308 Bacteria 10043
78 Ga0163163_10000058 3300014325 Bacteria 123478
79 Ga0207680_10000606 3300025903 Bacteria 16909
80 Ga0207647_10003860 3300025904 Bacteria 11213
81 Ga0207705_10000074 3300025909 Bacteria 123863
82 Ga0207705_10012006 3300025909 Bacteria 6259
83 Ga0207654_10000833 3300025911 Bacteria 16978
84 Ga0207695_10034659 3300025913 Bacteria 5486
85 Ga0207657_10000126 3300025919 Bacteria 76430
86 Ga0207649_10000377 3300025920 Bacteria 33369
87 Ga0207649_10012139 3300025920 Bacteria 4770
88 Ga0207652_10033321 3300025921 Bacteria 4337
89 Ga0207694_10014354 3300025924 Bacteria 5971
90 Ga0207644_10002106 3300025931 Bacteria 12897
91 Ga0207644_10016438 3300025931 Bacteria 4978
92 Ga0207690_10000106 3300025932 Bacteria 67786
93 Ga0207706_10000151 3300025933 Bacteria 76455
94 Ga0207706_10006100 3300025933 Bacteria 11189
95 Ga0207669_10000161 3300025937 Bacteria 32114
96 Ga0207711_10014571 3300025941 Bacteria 6534
97 Ga0207711_10023588 3300025941 Bacteria 5151
98 Ga0207661_10015106 3300025944 Bacteria 5674
99 Ga0207679_10000389 3300025945 Bacteria 31574
100 Ga0207679_10001189 3300025945 Bacteria 16549
101 Ga0207679_10021713 3300025945 Bacteria 4357
102 Ga0207667_10003979 3300025949 Bacteria 18164
103 Ga0207667_10051129 3300025949 Bacteria 4358
104 Ga0207651_10008885 3300025960 Bacteria 5456
105 Ga0207640_10007175 3300025981 Bacteria 6141
106 Ga0207658_10014075 3300025986 Bacteria 5477
107 Ga0207658_10014764 3300025986 Bacteria 5352
108 Ga0207703_10001661 3300026035 Bacteria 19996
109 Ga0207678_10000604 3300026067 Bacteria 32971
110 Ga0207678_10022222 3300026067 Bacteria 5558
111 Ga0207702_10000914 3300026078 Bacteria 30542
112 Ga0207702_10005521 3300026078 Bacteria 11051
113 Ga0207702_10009852 3300026078 Bacteria 8009
114 Ga0207676_10001353 3300026095 Bacteria 18223
115 Ga0207676_10026112 3300026095 Bacteria 4341
116 Ga0207674_10044872 3300026116 Bacteria 4551
117 Ga0207674_10048943 3300026116 Bacteria 4324
118 Ga0207683_10000655 3300026121 Bacteria 31727
119 Ga0207698_10007805 3300026142 Bacteria 6726
120 Ga0207698_10013287 3300026142 Bacteria 5426
121 Ga0207698_10014253 3300026142 Bacteria 5278
122 Ga0268266_10028088 3300028379 Bacteria 4783
123 Ga0268265_10011899 3300028380 Bacteria 5885
124 Ga0268264_10011460 3300028381 Bacteria 7319
125 Ga0307413_10004157 3300031824 Bacteria 6248
126 Ga0307410_10012934 3300031852 Bacteria 4847
127 Ga0307406_10003590 3300031901 Bacteria 8467
128 Ga0307407_10016748 3300031903 Bacteria 3657
129 Ga0307412_10008013 3300031911 Bacteria 6024
130 Ga0307412_10009850 3300031911 Bacteria 5490
131 Ga0307416_100012273 3300032002 Bacteria 5761
132 Ga0373931_0004753 3300035691 Bacteria 6228
133 Ga0395899_0007585 3300037312 Bacteria 8370
134 Ga0395900_0000503 3300037418 Bacteria 54976
135 Ga0395900_0003174 3300037418 Bacteria 17822
136 Ga0395900_0006519 3300037418 Bacteria 12163
137 Ga0395900_0009396 3300037418 Bacteria 10026
138 Ga0395900_0009639 3300037418 Bacteria 9905
139 Ga0395905_0001716 3300037471 Bacteria 25740
140 Ga0395905_0006388 3300037471 Bacteria 11877
141 Ga0395905_0007660 3300037471 Bacteria 10717
142 Ga0395905_0017902 3300037471 Bacteria 6731
143 Ga0395905_0036626 3300037471 Bacteria 4608
144 Ga0395901_0013982 3300038443 Bacteria 8167
145 Ga0395901_0035746 3300038443 Bacteria 5133
146 Ga0439461_0000102 3300041410 Bacteria 11190
147 Ga0439431_0001782 3300041997 Bacteria 4768
148 Ga0439445_0000043 3300042004 Bacteria 17542
149 Ga0439445_0000375 3300042004 Bacteria 8965
150 Ga0439432_000238 3300042006 Bacteria 19755
151 Ga0439462_0000236 3300042015 Bacteria 9784
152 Ga0439434_0000060 3300042435 Bacteria 26823
153 Ga0466961_0008822 3300044693 Bacteria 6430
154 Ga0466963_0002913 3300044694 Bacteria 9663
155 Ga0466963_0006954 3300044694 Bacteria 6731
156 Ga0466957_0005900 3300044842 Bacteria 6906
157 Ga0466958_0002187 3300045836 Bacteria 9741
158 Ga0466967_0011875 3300045976 Bacteria 6628
159 Ga0495638_0001862 3300046460 Bacteria 18268
160 Ga0495648_0000256 3300046524 Bacteria 60519
161 Ga0495625_0003289 3300046660 Bacteria 16312
162 Ga0495669_0003855 3300046684 Bacteria 6167
163 Ga0495600_0008106 3300046809 Bacteria 6443
164 Ga0495686_0000023 3300047472 Bacteria 400457
165 Ga0495615_0000040 3300048090 Bacteria 43261
166 Ga0496109_0016225 3300048912 Bacteria 6510
167 Ga0496112_0009389 3300048915 Bacteria 8809
168 Ga0496114_0000019 3300048917 Bacteria 244365
169 Ga0496122_0002648 3300048925 Bacteria 24993
170 Ga0496123_0026321 3300048926 Bacteria 4360
171 Ga0496126_0000733 3300048929 Bacteria 59621
172 Ga0501043_0030411 3300049579 Bacteria 4244
173 Ga0501067_0001291 3300049583 Bacteria 13591
174 Ga0501073_0000297 3300049589 Bacteria 32765
175 Ga0501077_0000026 3300049593 Bacteria 76023
176 Ga0501080_0031725 3300049742 Bacteria 4923
177 Ga0501083_0013461 3300049744 Bacteria 5717
178 nmdc:mga0k408_10162_c1 3300050493 Bacteria 5087
179 Ga0500595_000235 3300053119 Bacteria 37436
180 Ga0500645_001432 3300053730 Bacteria 12112
181 Ga0501084_0019414 3300054114 Bacteria 5662
182 Ga0501082_0009670 3300060353 Bacteria 8302

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2643221663 2644353891 905
2 iso_pu_bacteria 2585428106 2587919295 934
3 iso_pu_bacteria 2643221640 2644225123 934
4 iso_pu_bacteria 2643221642 2644232431 934
5 iso_pu_bacteria 2928972540 2928972986 934
6 iso_pu_bacteria 2977240413 2977242767 934
7 3300005354 Ga0070675_100004138 Ga0070675_1000041383 937
8 3300047472 Ga0495686_0000023 Ga0495686_0000023_185209_188301 941
9 3300037418 Ga0395900_0009396 Ga0395900_0009396_3007_6195 943
10 3300037471 Ga0395905_0017902 Ga0395905_0017902_657_3845 943
11 3300003322 rootL2_10119460 rootL2_101194601 945
12 iso_pu_bacteria 2928531327 2928532954 946
13 3300048917 Ga0496114_0000019 Ga0496114_0000019_240463_243564 948
14 3300049744 Ga0501083_0013461 Ga0501083_0013461_2438_5635 952
15 3300054114 Ga0501084_0019414 Ga0501084_0019414_1590_4787 952
16 3300060353 Ga0501082_0009670 Ga0501082_0009670_3452_6649 952
17 3300048929 Ga0496126_0000733 Ga0496126_0000733_35136_38165 955
18 3300025941 Ga0207711_10014571 Ga0207711_100145712 956
19 3300026095 Ga0207676_10026112 Ga0207676_100261122 956
20 3300049579 Ga0501043_0030411 Ga0501043_0030411_375_3446 961
21 3300049583 Ga0501067_0001291 Ga0501067_0001291_9473_12544 961
22 3300049589 Ga0501073_0000297 Ga0501073_0000297_834_3905 961
23 3300049593 Ga0501077_0000026 Ga0501077_0000026_64693_67764 961
24 3300049742 Ga0501080_0031725 Ga0501080_0031725_1543_4614 961
25 iso_pu_bacteria 2643221663 2644353003 961
26 3300009177 Ga0105248_10003809 Ga0105248_1000380911 963
27 3300048912 Ga0496109_0016225 Ga0496109_0016225_2705_6142 963
28 3300009177 Ga0105248_10031629 Ga0105248_100316293 965
29 3300031903 Ga0307407_10016748 Ga0307407_100167481 965
30 3300031911 Ga0307412_10009850 Ga0307412_100098504 965
31 3300028380 Ga0268265_10011899 Ga0268265_100118992 967
32 3300037471 Ga0395905_0036626 Ga0395905_0036626_1167_4412 967
33 3300044694 Ga0466963_0006954 Ga0466963_0006954_671_4084 971
34 3300005457 Ga0070662_100018158 Ga0070662_1000181582 972
35 3300013100 Ga0157373_10013494 Ga0157373_100134943 972
36 3300025921 Ga0207652_10033321 Ga0207652_100333212 972
37 3300048090 Ga0495615_0000040 Ga0495615_0000040_39121_42294 975
38 3300048925 Ga0496122_0002648 Ga0496122_0002648_974_4147 975
39 3300048926 Ga0496123_0026321 Ga0496123_0026321_955_4128 975
40 3300005577 Ga0068857_100030014 Ga0068857_1000300142 976
41 3300005616 Ga0068852_100022853 Ga0068852_1000228532 976
42 3300013105 Ga0157369_10037239 Ga0157369_100372392 976
43 3300026116 Ga0207674_10048943 Ga0207674_100489432 976
44 3300026142 Ga0207698_10014253 Ga0207698_100142533 976
45 3300042004 Ga0439445_0000375 Ga0439445_0000375_2592_5801 976
46 3300005614 Ga0068856_100011526 Ga0068856_1000115262 977
47 3300045976 Ga0466967_0011875 Ga0466967_0011875_304_3585 977
48 3300009148 Ga0105243_10001076 Ga0105243_1000107621 978
49 3300011119 Ga0105246_10004834 Ga0105246_100048344 978
50 3300050493 nmdc:mga0k408_10162_c1 nmdc:mga0k408_10162_c1_510_3557 978
51 3300005327 Ga0070658_10005347 Ga0070658_100053473 979
52 3300005329 Ga0070683_100012416 Ga0070683_1000124164 979
53 3300005339 Ga0070660_100023910 Ga0070660_1000239102 979
54 3300005355 Ga0070671_100002805 Ga0070671_1000028052 979
55 3300013102 Ga0157371_10006748 Ga0157371_100067482 979
56 3300013104 Ga0157370_10027146 Ga0157370_100271462 979
57 3300013105 Ga0157369_10004227 Ga0157369_1000422712 979
58 3300025909 Ga0207705_10012006 Ga0207705_100120064 979
59 3300025931 Ga0207644_10002106 Ga0207644_100021062 979
60 3300025944 Ga0207661_10015106 Ga0207661_100151062 979
61 3300037312 Ga0395899_0007585 Ga0395899_0007585_4592_7873 979
62 3300037418 Ga0395900_0006519 Ga0395900_0006519_3251_6532 979
63 3300038443 Ga0395901_0013982 Ga0395901_0013982_3239_6520 979
64 3300005364 Ga0070673_100007275 Ga0070673_1000072751 980
65 3300013308 Ga0157375_10006683 Ga0157375_100066833 980
66 3300025960 Ga0207651_10008885 Ga0207651_100088852 980
67 3300028379 Ga0268266_10028088 Ga0268266_100280882 980
68 3300037418 Ga0395900_0000503 Ga0395900_0000503_23587_26775 981
69 3300037418 Ga0395900_0009639 Ga0395900_0009639_4537_7830 981
70 3300037471 Ga0395905_0001716 Ga0395905_0001716_19641_22829 981
71 3300037471 Ga0395905_0007660 Ga0395905_0007660_1581_4874 981
72 3300053730 Ga0500645_001432 Ga0500645_001432_8792_11932 981
73 3300005843 Ga0068860_100016078 Ga0068860_1000160781 982
74 3300013306 Ga0163162_10008254 Ga0163162_100082543 982
75 3300028381 Ga0268264_10011460 Ga0268264_100114606 982
76 3300001990 JGI24737J22298_10001108 JGI24737J22298_100011083 983
77 3300005327 Ga0070658_10000131 Ga0070658_1000013148 983
78 3300005335 Ga0070666_10000163 Ga0070666_100001633 983
79 3300005337 Ga0070682_100008461 Ga0070682_1000084611 983
80 3300005339 Ga0070660_100000864 Ga0070660_1000008649 983
81 3300005344 Ga0070661_100000075 Ga0070661_10000007536 983
82 3300005355 Ga0070671_100025466 Ga0070671_1000254662 983
83 3300005366 Ga0070659_100000126 Ga0070659_1000001266 983
84 3300005367 Ga0070667_100001318 Ga0070667_1000013186 983
85 3300005455 Ga0070663_100000529 Ga0070663_1000005297 983
86 3300005457 Ga0070662_100000121 Ga0070662_1000001212 983
87 3300005535 Ga0070684_100037088 Ga0070684_1000370882 983
88 3300005539 Ga0068853_100000078 Ga0068853_10000007848 983
89 3300005547 Ga0070693_100001557 Ga0070693_1000015572 983
90 3300005563 Ga0068855_100002294 Ga0068855_10000229413 983
91 3300005564 Ga0070664_100000671 Ga0070664_1000006719 983
92 3300005614 Ga0068856_100000538 Ga0068856_10000053831 983
93 3300005616 Ga0068852_100003893 Ga0068852_1000038933 983
94 3300005618 Ga0068864_100005320 Ga0068864_1000053202 983
95 3300006358 Ga0068871_100014172 Ga0068871_1000141721 983
96 3300009177 Ga0105248_10000443 Ga0105248_1000044313 983
97 3300013102 Ga0157371_10003312 Ga0157371_100033129 983
98 3300014325 Ga0163163_10000058 Ga0163163_1000005837 983
99 3300025903 Ga0207680_10000606 Ga0207680_100006063 983
100 3300025909 Ga0207705_10000074 Ga0207705_10000074105 983
101 3300025919 Ga0207657_10000126 Ga0207657_1000012631 983
102 3300025920 Ga0207649_10000377 Ga0207649_1000037718 983
103 3300025931 Ga0207644_10016438 Ga0207644_100164382 983
104 3300025932 Ga0207690_10000106 Ga0207690_1000010629 983
105 3300025933 Ga0207706_10000151 Ga0207706_1000015148 983
106 3300025945 Ga0207679_10000389 Ga0207679_1000038918 983
107 3300025949 Ga0207667_10003979 Ga0207667_100039799 983
108 3300025986 Ga0207658_10014075 Ga0207658_100140752 983
109 3300026067 Ga0207678_10000604 Ga0207678_100006049 983
110 3300026078 Ga0207702_10000914 Ga0207702_1000091418 983
111 3300026095 Ga0207676_10001353 Ga0207676_100013536 983
112 3300026142 Ga0207698_10007805 Ga0207698_100078053 983
113 3300035691 Ga0373931_0004753 Ga0373931_0004753_1468_4785 983
114 3300038443 Ga0395901_0035746 Ga0395901_0035746_1190_4522 984
115 3300044693 Ga0466961_0008822 Ga0466961_0008822_1941_5228 984
116 3300044694 Ga0466963_0002913 Ga0466963_0002913_3612_6899 984
117 3300044842 Ga0466957_0005900 Ga0466957_0005900_2060_5347 984
118 3300045836 Ga0466958_0002187 Ga0466958_0002187_2791_6078 984
119 3300005617 Ga0068859_100013333 Ga0068859_1000133332 985
120 3300006931 Ga0097620_100013333 Ga0097620_1000133336 985
121 3300025941 Ga0207711_10023588 Ga0207711_100235882 985
122 3300005344 Ga0070661_100022877 Ga0070661_1000228772 987
123 3300005366 Ga0070659_100013142 Ga0070659_1000131421 987
124 3300005455 Ga0070663_100004548 Ga0070663_1000045483 987
125 3300005539 Ga0068853_100038333 Ga0068853_1000383331 987
126 3300005616 Ga0068852_100011572 Ga0068852_1000115723 987
127 3300025920 Ga0207649_10012139 Ga0207649_100121392 987
128 3300025945 Ga0207679_10021713 Ga0207679_100217132 987
129 3300005355 Ga0070671_100007812 Ga0070671_1000078124 988
130 3300009177 Ga0105248_10039705 Ga0105248_100397053 988
131 3300009551 Ga0105238_10033443 Ga0105238_100334432 988
132 3300013104 Ga0157370_10037613 Ga0157370_100376132 988
133 3300013105 Ga0157369_10001278 Ga0157369_1000127818 988
134 3300025924 Ga0207694_10014354 Ga0207694_100143542 988
135 3300025981 Ga0207640_10007175 Ga0207640_100071753 988
136 3300048915 Ga0496112_0009389 Ga0496112_0009389_2235_5465 988
137 3300005328 Ga0070676_10010573 Ga0070676_100105732 989
138 3300005367 Ga0070667_100025651 Ga0070667_1000256512 989
139 3300005547 Ga0070693_100008732 Ga0070693_1000087323 989
140 3300005564 Ga0070664_100018093 Ga0070664_1000180932 989
141 3300025933 Ga0207706_10006100 Ga0207706_100061003 989
142 3300025949 Ga0207667_10051129 Ga0207667_100511292 989
143 3300041410 Ga0439461_0000102 Ga0439461_0000102_3045_6152 989
144 3300041997 Ga0439431_0001782 Ga0439431_0001782_1319_4426 989
145 3300042004 Ga0439445_0000043 Ga0439445_0000043_4205_7312 989
146 3300042006 Ga0439432_000238 Ga0439432_000238_1506_4613 989
147 3300042015 Ga0439462_0000236 Ga0439462_0000236_3738_6845 989
148 3300042435 Ga0439434_0000060 Ga0439434_0000060_15161_18268 989
149 3300046460 Ga0495638_0001862 Ga0495638_0001862_11839_15054 993
150 3300037418 Ga0395900_0003174 Ga0395900_0003174_4025_7612 996
151 3300037471 Ga0395905_0006388 Ga0395905_0006388_3324_6911 996
152 3300005456 Ga0070678_100000076 Ga0070678_10000007612 997
153 3300005564 Ga0070664_100009718 Ga0070664_1000097182 997
154 3300006195 Ga0075366_10007230 Ga0075366_100072303 997
155 3300025904 Ga0207647_10003860 Ga0207647_100038603 997
156 3300025937 Ga0207669_10000161 Ga0207669_1000016113 997
157 3300025945 Ga0207679_10001189 Ga0207679_100011892 997
158 3300026121 Ga0207683_10000655 Ga0207683_1000065512 997
159 3300046524 Ga0495648_0000256 Ga0495648_0000256_16187_19354 997
160 3300046809 Ga0495600_0008106 Ga0495600_0008106_3090_6278 997
161 3300053119 Ga0500595_000235 Ga0500595_000235_3015_6203 997
162 3300005614 Ga0068856_100012324 Ga0068856_1000123242 998
163 3300025986 Ga0207658_10014764 Ga0207658_100147643 998
164 3300026078 Ga0207702_10009852 Ga0207702_100098524 998
165 3300046684 Ga0495669_0003855 Ga0495669_0003855_2674_5988 999
166 3300005367 Ga0070667_100008225 Ga0070667_1000082253 1001
167 3300031824 Ga0307413_10004157 Ga0307413_100041573 1004
168 3300031852 Ga0307410_10012934 Ga0307410_100129342 1004
169 3300031901 Ga0307406_10003590 Ga0307406_100035904 1004
170 3300031911 Ga0307412_10008013 Ga0307412_100080133 1004
171 3300032002 Ga0307416_100012273 Ga0307416_1000122733 1004
172 3300005842 Ga0068858_100000423 Ga0068858_10000042341 1037
173 3300026035 Ga0207703_10001661 Ga0207703_100016613 1037
174 3300046660 Ga0495625_0003289 Ga0495625_0003289_7312_10497 1038
175 3300001915 JGI24741J21665_1000772 JGI24741J21665_10007725 1047
176 3300005455 Ga0070663_100006165 Ga0070663_1000061653 1047
177 3300005616 Ga0068852_100020689 Ga0068852_1000206893 1047
178 3300009174 Ga0105241_10008998 Ga0105241_100089983 1047
179 3300009545 Ga0105237_10028039 Ga0105237_100280393 1047
180 3300009551 Ga0105238_10023712 Ga0105238_100237123 1047
181 3300013100 Ga0157373_10010046 Ga0157373_100100464 1047
182 3300013102 Ga0157371_10000097 Ga0157371_1000009791 1047
183 3300013105 Ga0157369_10027880 Ga0157369_100278803 1047
184 3300013307 Ga0157372_10037064 Ga0157372_100370643 1047
185 3300025911 Ga0207654_10000833 Ga0207654_100008335 1047
186 3300025913 Ga0207695_10034659 Ga0207695_100346593 1047
187 3300026067 Ga0207678_10022222 Ga0207678_100222223 1047
188 3300026078 Ga0207702_10005521 Ga0207702_1000552111 1047
189 3300026116 Ga0207674_10044872 Ga0207674_100448723 1047
190 3300026142 Ga0207698_10013287 Ga0207698_100132873 1047

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07715

Plug

TonB-dependent Receptor Plug Domain

100

223

0.91

PF00593

TonB_dep_Rec_b-barrel

TonB dependent receptor-like, beta-barrel

488

1079

0.75

Structural Annotation

Top 5 Hits

ID Description Score Start End
3rgm-assembly1.cif.gz_A crystal structure of spin-labeled btub t156r1 0.8299 50 1045
3rgm-assembly1.cif.gz_A crystal structure of spin-labeled btub t156r1 0.8285 50 1045
3rgn-assembly1.cif.gz_A crystal structure of spin-labeled btub w371r1 0.8234 49 1045
3rgn-assembly1.cif.gz_A crystal structure of spin-labeled btub w371r1 0.822 49 1045
1nqe-assembly1.cif.gz_A outer membrane cobalamin transporter (btub) from e. coli 0.818 49 1045
ID Description Score Start End Superfamily
3rgnA02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.8093 188 1045 2.40.170.20
3rgnA02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.8076 188 1045 2.40.170.20
2hdiA02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.7907 194 1045 2.40.170.20
2hdiA02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.786 194 1045 2.40.170.20
3fhhA02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.7771 194 1043 2.40.170.20
ID Description Score Start End GO Terms
AF-A0A7W4G5J5-F1-model_v4 deleted 0.9044 20 1045
AF-A0A7W4G5J5-F1-model_v4 deleted 0.9026 20 1045
AF-A0A3D5EEZ5-F1-model_v4 TonB-dependent receptor 0.8855 749 1045 GO:0009279
AF-A0A3D5EEZ5-F1-model_v4 TonB-dependent receptor 0.8768 749 1045 GO:0009279
AF-A0A1C0TXG0-F1-model_v4 TonB-dependent receptor 0.8461 41 1045 GO:0009279

Feature Viewer

pLDDT pTM Quality
76.12 0.78 High
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Predicted Structure (AlphaFold2)

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