F292363

General Info

Members Datasets Scaffolds Average Seq Length
190 139 380 385

Family's Representative Sequence

Representative Sequence 3300007076|Ga0075435_100183457|Ga0075435_1001834572
Length 418
Sequence MKMSSRVIAIALACTAILISVGVVAGGRFEAAGAPEEPVLQRGRGGDNPFPGGTNPDGSLRPTRPVTQLFTQDAYTEYAILEPGSESFRIRFLPEENREGATELVNATRGGSEGSGVEVYDPRTGKPLKFTYQQEGNDPENHAIHATLPIPVPKGGVGRVLIYKTYKDPRTYMMHGEDIVWVRSLSGYRLGVLLPKGFAFISSNVAAQLSTTSDGRLKLAFANPSGQSNPVTIHARKTAAAFAPAPSDRGASGGDMFFDDVKTLYDLDAPESGRVRVEQIYSDYRKGDRARLDSLSYLALQDLKVIDLDTAKELPATKQGSATTVKLDVPIVEDRQSAHLRLTGAIGDGSYKASNGDLTFERTLHGLRNTILLPDGYDVTACSQSGTIGTTAQGRQFVSLINLNAENNYRVAIRAKKR

Samples

Sample ID Description Type Environment
1 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
2 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
8 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
11 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
12 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
13 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
14 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
15 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
16 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
17 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
18 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
19 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
20 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
21 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
22 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
23 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
24 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
25 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
26 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
27 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
28 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
29 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
30 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
31 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
32 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
33 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
34 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
35 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
36 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
37 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
38 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
39 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
40 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
41 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
42 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
43 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
44 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
45 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
46 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
47 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
49 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
50 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
51 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
53 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
55 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
56 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
58 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
59 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
60 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
61 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
62 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
63 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
64 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
65 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
96 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
98 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
99 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
100 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
101 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
102 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
103 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
104 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
105 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
106 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
107 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
108 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
109 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
110 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
111 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
112 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
113 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
114 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
115 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
116 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
117 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
118 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
122 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
123 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
124 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
125 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
126 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
127 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
128 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
129 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
130 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
131 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
132 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
133 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
134 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
135 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
136 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
137 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
138 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
139 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.89
Nodule 0
Rhizoplane 4.21
Rhizosphere 87.89
Stem 0
Stem Tuber 0
Unclassified 12.11

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075435_100183457 3300007076 Bacteria 1769
2 JGI24751J29686_10008484 3300002459 Bacteria 2103
3 Ga0065712_10094171 3300005290 Bacteria 2265
4 Ga0065712_10110995 3300005290 Bacteria 1826
5 Ga0065712_10127341 3300005290 Bacteria 1591
6 Ga0065715_10111829 3300005293 Bacteria 2557
7 Ga0065707_10014623 3300005295 Unclassified 1768
8 Ga0070658_10024553 3300005327 Bacteria 4835
9 Ga0070658_10025359 3300005327 Unclassified 4754
10 Ga0070676_10039182 3300005328 Bacteria 2739
11 Ga0070683_100062627 3300005329 Bacteria 3459
12 Ga0070670_100084499 3300005331 Unclassified 2727
13 Ga0068869_100022422 3300005334 Bacteria 4352
14 Ga0070666_10038309 3300005335 Bacteria 3189
15 Ga0070680_100000658 3300005336 Bacteria 23917
16 Ga0068868_100202278 3300005338 Bacteria 1656
17 Ga0070660_100095123 3300005339 Unclassified 2354
18 Ga0070689_100027949 3300005340 Bacteria 4258
19 Ga0070687_100045124 3300005343 Bacteria 2248
20 Ga0070669_100187629 3300005353 Bacteria 1620
21 Ga0070675_100031244 3300005354 Bacteria 4304
22 Ga0070675_100204897 3300005354 Unclassified 1713
23 Ga0070671_100103895 3300005355 Bacteria 2384
24 Ga0070674_100245845 3300005356 Bacteria 1403
25 Ga0070673_100013156 3300005364 Bacteria 5711
26 Ga0070688_100221979 3300005365 Bacteria 1332
27 Ga0070667_100208896 3300005367 Bacteria 1735
28 Ga0070703_10018691 3300005406 Bacteria 2007
29 Ga0070709_10073835 3300005434 Bacteria 2209
30 Ga0070714_100005563 3300005435 Bacteria 9620
31 Ga0070701_10034364 3300005438 Bacteria 2538
32 Ga0070711_100009161 3300005439 Bacteria 6085
33 Ga0070700_100029543 3300005441 Bacteria 3269
34 Ga0070662_100050104 3300005457 Bacteria 3012
35 Ga0068867_100018120 3300005459 Bacteria 5004
36 Ga0068867_100019057 3300005459 Bacteria 4886
37 Ga0070679_100000954 3300005530 Bacteria 25146
38 Ga0070679_100185379 3300005530 Bacteria 2052
39 Ga0070665_100003263 3300005548 Bacteria 17403
40 Ga0070704_100022914 3300005549 Bacteria 4070
41 Ga0068854_100023026 3300005578 Bacteria 4251
42 Ga0068852_100308150 3300005616 Unclassified 1534
43 Ga0068859_100088859 3300005617 Bacteria 3139
44 Ga0068866_10080803 3300005718 Bacteria 1745
45 Ga0068858_100011082 3300005842 Bacteria 8525
46 Ga0068858_100041070 3300005842 Bacteria 4290
47 Ga0068858_100100572 3300005842 Bacteria 2696
48 Ga0068858_100136349 3300005842 Unclassified 2303
49 Ga0070717_10020431 3300006028 Bacteria 5208
50 Ga0075365_10002965 3300006038 Bacteria 8579
51 Ga0075365_10016451 3300006038 Bacteria 4499
52 Ga0075364_10068055 3300006051 Bacteria 2341
53 Ga0075364_10226370 3300006051 Bacteria 1270
54 Ga0070712_100098211 3300006175 Bacteria 2160
55 Ga0075362_10115352 3300006177 Bacteria 1268
56 Ga0075367_10112736 3300006178 Bacteria 1670
57 Ga0075366_10001741 3300006195 Bacteria 10946
58 Ga0075366_10002289 3300006195 Bacteria 9782
59 Ga0097621_100004279 3300006237 Bacteria 9912
60 Ga0097621_100107135 3300006237 Unclassified 2358
61 Ga0068871_100023938 3300006358 Bacteria 4731
62 Ga0068871_100056654 3300006358 Bacteria 3187
63 Ga0068871_100067047 3300006358 Bacteria 2943
64 Ga0075431_100046092 3300006847 Bacteria 4495
65 Ga0068865_100005176 3300006881 Bacteria 7890
66 Ga0068865_100104190 3300006881 Bacteria 2082
67 Ga0097620_100088860 3300006931 Bacteria 3139
68 Ga0075435_100001534 3300007076 Bacteria 14875
69 Ga0075435_100072391 3300007076 Bacteria 2816
70 Ga0105240_10065001 3300009093 Bacteria 4530
71 Ga0111539_10003347 3300009094 Bacteria 21180
72 Ga0111539_10026157 3300009094 Bacteria 7142
73 Ga0105245_10011620 3300009098 Bacteria 7667
74 Ga0105245_10046016 3300009098 Bacteria 3899
75 Ga0105247_10003129 3300009101 Bacteria 10916
76 Ga0114129_10000907 3300009147 Bacteria 38532
77 Ga0114129_10005768 3300009147 Bacteria 17540
78 Ga0114129_10430135 3300009147 Bacteria 1734
79 Ga0105243_10064758 3300009148 Bacteria 2934
80 Ga0105242_10001517 3300009176 Bacteria 18248
81 Ga0105242_10016376 3300009176 Bacteria 5762
82 Ga0105248_10005600 3300009177 Bacteria 13803
83 Ga0105248_10053591 3300009177 Unclassified 4525
84 Ga0105248_10110093 3300009177 Bacteria 3106
85 Ga0105248_10120075 3300009177 Bacteria 2965
86 Ga0105248_10164215 3300009177 Unclassified 2504
87 Ga0105248_10226758 3300009177 Bacteria 2103
88 Ga0105248_10409570 3300009177 Bacteria 1527
89 Ga0163162_10012065 3300013306 Bacteria 8429
90 Ga0157375_10333563 3300013308 Bacteria 1682
91 Ga0157375_10354935 3300013308 Bacteria 1632
92 Ga0163163_10000005 3300014325 Bacteria 369548
93 Ga0163163_10026144 3300014325 Bacteria 5575
94 Ga0157380_10113940 3300014326 Bacteria 2278
95 Ga0157380_10150852 3300014326 Bacteria 2009
96 Ga0157376_10066856 3300014969 Unclassified 3039
97 Ga0207642_10063724 3300025899 Bacteria 1725
98 Ga0207688_10017377 3300025901 Bacteria 3908
99 Ga0207647_10105916 3300025904 Bacteria 1665
100 Ga0207705_10039836 3300025909 Unclassified 3368
101 Ga0207695_10073466 3300025913 Unclassified 3485
102 Ga0207660_10056189 3300025917 Unclassified 2816
103 Ga0207662_10003640 3300025918 Bacteria 7978
104 Ga0207657_10014479 3300025919 Bacteria 7696
105 Ga0207652_10006928 3300025921 Bacteria 9129
106 Ga0207681_10166266 3300025923 Bacteria 1668
107 Ga0207650_10064927 3300025925 Unclassified 2733
108 Ga0207687_10018222 3300025927 Bacteria 4631
109 Ga0207700_10140357 3300025928 Bacteria 1985
110 Ga0207664_10056508 3300025929 Bacteria 3117
111 Ga0207664_10060969 3300025929 Bacteria 3008
112 Ga0207644_10090893 3300025931 Bacteria 2275
113 Ga0207706_10101428 3300025933 Bacteria 2532
114 Ga0207686_10017703 3300025934 Bacteria 4019
115 Ga0207704_10003398 3300025938 Bacteria 7233
116 Ga0207691_10029385 3300025940 Bacteria 5142
117 Ga0207711_10088672 3300025941 Bacteria 2716
118 Ga0207667_10082505 3300025949 Bacteria 3330
119 Ga0207640_10094629 3300025981 Bacteria 2078
120 Ga0207703_10004593 3300026035 Bacteria 11300
121 Ga0207703_10150808 3300026035 Unclassified 2027
122 Ga0207708_10006339 3300026075 Bacteria 8769
123 Ga0207641_10017905 3300026088 Bacteria 5804
124 Ga0207641_10078481 3300026088 Bacteria 2860
125 Ga0207641_10086897 3300026088 Bacteria 2728
126 Ga0207648_10013358 3300026089 Bacteria 7643
127 Ga0207648_10028877 3300026089 Bacteria 4916
128 Ga0207676_10005801 3300026095 Bacteria 8729
129 Ga0207675_100015221 3300026118 Bacteria 7176
130 Ga0207683_10225978 3300026121 Bacteria 1706
131 Ga0207698_10138351 3300026142 Bacteria 2093
132 Ga0207428_10256117 3300027907 Bacteria 1304
133 Ga0268264_10197886 3300028381 Unclassified 1836
134 Ga0268264_10279407 3300028381 Bacteria 1563
135 Ga0307413_10138675 3300031824 Unclassified 1677
136 Ga0307412_10047508 3300031911 Unclassified 2820
137 Ga0373944_0003104 3300035089 Bacteria 4276
138 Ga0373957_0025181 3300035120 Bacteria 2142
139 Ga0373955_0003174 3300035172 Bacteria 7194
140 Ga0373933_0002819 3300035724 Bacteria 9710
141 Ga0373937_0001226 3300036401 Bacteria 21548
142 Ga0373937_0161777 3300036401 Bacteria 2099
143 Ga0451576_0156614 3300045051 Bacteria 2376
144 Ga0495592_0052404 3300046454 Bacteria 3030
145 Ga0495651_0077095 3300046462 Unclassified 2524
146 Ga0495653_0070441 3300046463 Bacteria 2617
147 Ga0495645_0003051 3300046543 Bacteria 11342
148 Ga0495635_0043561 3300046663 Bacteria 3097
149 Ga0495613_0029065 3300046689 Bacteria 4110
150 Ga0495684_0162662 3300047471 Bacteria 1664
151 Ga0496104_0149559 3300048907 Unclassified 2242
152 Ga0496106_0097191 3300048909 Bacteria 2280
153 Ga0496112_0052251 3300048915 Unclassified 4010
154 Ga0496112_0148689 3300048915 Bacteria 2310
155 Ga0496112_0235688 3300048915 Bacteria 1784
156 Ga0496113_0141501 3300048916 Bacteria 1893
157 Ga0496114_0104168 3300048917 Bacteria 2426
158 Ga0496115_0061506 3300048918 Bacteria 3027
159 Ga0501034_0010966 3300049571 Bacteria 9414
160 Ga0501034_0031791 3300049571 Bacteria 5361
161 Ga0501040_0052571 3300049576 Bacteria 2789
162 Ga0501047_0033908 3300049581 Bacteria 4928
163 Ga0501073_0004814 3300049589 Bacteria 10132
164 Ga0501074_0089754 3300049590 Bacteria 2201
165 Ga0501075_0054067 3300049591 Bacteria 3020
166 Ga0501075_0111183 3300049591 Bacteria 2083
167 Ga0501079_0287639 3300049741 Bacteria 1285
168 Ga0501081_0105616 3300049743 Bacteria 1995
169 nmdc:mga00v17_256707_c1 3300050491 Bacteria 1134
170 nmdc:mga00v17_45029_c1 3300050491 Bacteria 2664
171 nmdc:mga0yw44_13294_c1 3300050492 Bacteria 4328
172 nmdc:mga0k408_125415_c1 3300050493 Bacteria 1523
173 nmdc:mga0k408_4519_c1 3300050493 Bacteria 7384
174 nmdc:mga06z11_64598_c1 3300050494 Unclassified 1919
175 nmdc:mga05p37_1_c1 3300050507 Bacteria 177088
176 nmdc:mga05p37_364290_c1 3300050507 Bacteria 1698
177 nmdc:mga05p37_408_c1 3300050507 Bacteria 46505
178 nmdc:mga09592_379102_c1 3300050508 Bacteria 1223
179 nmdc:mga06r32_18938_c1 3300050510 Bacteria 6312
180 nmdc:mga08y16_129260_c1 3300050511 Bacteria 2628
181 nmdc:mga08y16_5538_c2 3300050511 Bacteria 12511
182 nmdc:mga0n895_116673_c1 3300050512 Bacteria 2688
183 nmdc:mga0rr50_22463_c1 3300050513 Bacteria 4330
184 nmdc:mga0rr50_262698_c1 3300050513 Bacteria 1436
185 nmdc:mga0a205_285156_c1 3300050515 Bacteria 1526
186 nmdc:mga0a205_62677_c1 3300050515 Bacteria 3592
187 Ga0495619_0043615 3300053085 Bacteria 2941
188 Ga0495619_0190806 3300053085 Bacteria 1418
189 Ga0500555_042622 3300053103 Bacteria 1260
190 Ga0501084_0090650 3300054114 Bacteria 2567
191 Ga0075435_100183457
192 JGI24751J29686_10008484
193 Ga0065712_10094171
194 Ga0065712_10110995
195 Ga0065712_10127341
196 Ga0065715_10111829
197 Ga0065707_10014623
198 Ga0070658_10024553
199 Ga0070658_10025359
200 Ga0070676_10039182
201 Ga0070683_100062627
202 Ga0070670_100084499
203 Ga0068869_100022422
204 Ga0070666_10038309
205 Ga0070680_100000658
206 Ga0068868_100202278
207 Ga0070660_100095123
208 Ga0070689_100027949
209 Ga0070687_100045124
210 Ga0070669_100187629
211 Ga0070675_100031244
212 Ga0070675_100204897
213 Ga0070671_100103895
214 Ga0070674_100245845
215 Ga0070673_100013156
216 Ga0070688_100221979
217 Ga0070667_100208896
218 Ga0070703_10018691
219 Ga0070709_10073835
220 Ga0070714_100005563
221 Ga0070701_10034364
222 Ga0070711_100009161
223 Ga0070700_100029543
224 Ga0070662_100050104
225 Ga0068867_100018120
226 Ga0068867_100019057
227 Ga0070679_100000954
228 Ga0070679_100185379
229 Ga0070665_100003263
230 Ga0070704_100022914
231 Ga0068854_100023026
232 Ga0068852_100308150
233 Ga0068859_100088859
234 Ga0068866_10080803
235 Ga0068858_100011082
236 Ga0068858_100041070
237 Ga0068858_100100572
238 Ga0068858_100136349
239 Ga0070717_10020431
240 Ga0075365_10002965
241 Ga0075365_10016451
242 Ga0075364_10068055
243 Ga0075364_10226370
244 Ga0070712_100098211
245 Ga0075362_10115352
246 Ga0075367_10112736
247 Ga0075366_10001741
248 Ga0075366_10002289
249 Ga0097621_100004279
250 Ga0097621_100107135
251 Ga0068871_100023938
252 Ga0068871_100056654
253 Ga0068871_100067047
254 Ga0075431_100046092
255 Ga0068865_100005176
256 Ga0068865_100104190
257 Ga0097620_100088860
258 Ga0075435_100001534
259 Ga0075435_100072391
260 Ga0105240_10065001
261 Ga0111539_10003347
262 Ga0111539_10026157
263 Ga0105245_10011620
264 Ga0105245_10046016
265 Ga0105247_10003129
266 Ga0114129_10000907
267 Ga0114129_10005768
268 Ga0114129_10430135
269 Ga0105243_10064758
270 Ga0105242_10001517
271 Ga0105242_10016376
272 Ga0105248_10005600
273 Ga0105248_10053591
274 Ga0105248_10110093
275 Ga0105248_10120075
276 Ga0105248_10164215
277 Ga0105248_10226758
278 Ga0105248_10409570
279 Ga0163162_10012065
280 Ga0157375_10333563
281 Ga0157375_10354935
282 Ga0163163_10000005
283 Ga0163163_10026144
284 Ga0157380_10113940
285 Ga0157380_10150852
286 Ga0157376_10066856
287 Ga0207642_10063724
288 Ga0207688_10017377
289 Ga0207647_10105916
290 Ga0207705_10039836
291 Ga0207695_10073466
292 Ga0207660_10056189
293 Ga0207662_10003640
294 Ga0207657_10014479
295 Ga0207652_10006928
296 Ga0207681_10166266
297 Ga0207650_10064927
298 Ga0207687_10018222
299 Ga0207700_10140357
300 Ga0207664_10056508
301 Ga0207664_10060969
302 Ga0207644_10090893
303 Ga0207706_10101428
304 Ga0207686_10017703
305 Ga0207704_10003398
306 Ga0207691_10029385
307 Ga0207711_10088672
308 Ga0207667_10082505
309 Ga0207640_10094629
310 Ga0207703_10004593
311 Ga0207703_10150808
312 Ga0207708_10006339
313 Ga0207641_10017905
314 Ga0207641_10078481
315 Ga0207641_10086897
316 Ga0207648_10013358
317 Ga0207648_10028877
318 Ga0207676_10005801
319 Ga0207675_100015221
320 Ga0207683_10225978
321 Ga0207698_10138351
322 Ga0207428_10256117
323 Ga0268264_10197886
324 Ga0268264_10279407
325 Ga0307413_10138675
326 Ga0307412_10047508
327 Ga0373944_0003104
328 Ga0373957_0025181
329 Ga0373955_0003174
330 Ga0373933_0002819
331 Ga0373937_0001226
332 Ga0373937_0161777
333 Ga0451576_0156614
334 Ga0495592_0052404
335 Ga0495651_0077095
336 Ga0495653_0070441
337 Ga0495645_0003051
338 Ga0495635_0043561
339 Ga0495613_0029065
340 Ga0495684_0162662
341 Ga0496104_0149559
342 Ga0496106_0097191
343 Ga0496112_0052251
344 Ga0496112_0148689
345 Ga0496112_0235688
346 Ga0496113_0141501
347 Ga0496114_0104168
348 Ga0496115_0061506
349 Ga0501034_0010966
350 Ga0501034_0031791
351 Ga0501040_0052571
352 Ga0501047_0033908
353 Ga0501073_0004814
354 Ga0501074_0089754
355 Ga0501075_0054067
356 Ga0501075_0111183
357 Ga0501079_0287639
358 Ga0501081_0105616
359 nmdc:mga00v17_256707_c1
360 nmdc:mga00v17_45029_c1
361 nmdc:mga0yw44_13294_c1
362 nmdc:mga0k408_125415_c1
363 nmdc:mga0k408_4519_c1
364 nmdc:mga06z11_64598_c1
365 nmdc:mga05p37_1_c1
366 nmdc:mga05p37_364290_c1
367 nmdc:mga05p37_408_c1
368 nmdc:mga09592_379102_c1
369 nmdc:mga06r32_18938_c1
370 nmdc:mga08y16_129260_c1
371 nmdc:mga08y16_5538_c2
372 nmdc:mga0n895_116673_c1
373 nmdc:mga0rr50_22463_c1
374 nmdc:mga0rr50_262698_c1
375 nmdc:mga0a205_285156_c1
376 nmdc:mga0a205_62677_c1
377 Ga0495619_0043615
378 Ga0495619_0190806
379 Ga0500555_042622
380 Ga0501084_0090650

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
5nie-assembly1.cif.gz_A crystal structure of human lta4h mutant r563a in open conformation 0.6622 48 210
6enb-assembly1.cif.gz_A lta4 hydrolase (e297q) mutant in complex with pro-gly-pro peptide 0.662 45 208
5ni4-assembly1.cif.gz_C crystal structure of human lta4h mutant e271a in complex with lta4 (crystal form ii) 0.6609 45 209
4gaa-assembly1.cif.gz_B structure of leukotriene a4 hydrolase from xenopus laevis complexed with inhibitor bestatin 0.6587 48 206
5ni6-assembly1.cif.gz_A crystal structure of human lta4h mutant d375n in complex with lta4 0.6507 48 209
ID Description Score Start End Superfamily
af_Q10176_213_421_2.60.40.1730 Mainly Beta;Sandwich;Immunoglobulin-like;tricorn interacting facor f3 domain 0.7487 47 209 2.60.40.1730
af_O77351_47_262_1.10.1070.11 Mainly Alpha;Orthogonal Bundle;Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5;Phosphatidylinositol 3-/4-kinase, catalytic domain 0.6682 48 209 1.10.1070.11
af_B9FDT1_35_224_2.60.40.1730 Mainly Beta;Sandwich;Immunoglobulin-like;tricorn interacting facor f3 domain 0.6661 48 206 2.60.40.1730
af_Q6DGD8_25_216_2.60.40.1730 Mainly Beta;Sandwich;Immunoglobulin-like;tricorn interacting facor f3 domain 0.6648 48 208 2.60.40.1730
1gw6A01 Mainly Beta;Sandwich;Immunoglobulin-like;tricorn interacting facor f3 domain 0.6489 45 208 2.60.40.1730
ID Description Score Start End GO Terms
AF-A0A1G0PHL3-F1-model_v4 Uncharacterized protein 0.9585 154 211
AF-A0A7Y2HI24-F1-model_v4 Uncharacterized protein 0.9514 316 384
AF-A0A2V7Y007-F1-model_v4 Uncharacterized protein 0.9421 48 211
AF-A0A352FPQ7-F1-model_v4 Uncharacterized protein 0.9406 317 384
AF-A0A2U3LYJ5-F1-model_v4 Uncharacterized protein 0.9384 209 384

Map