F292321

General Info

Members Datasets Scaffolds Average Seq Length
190 112 380 358

Family's Representative Sequence

Representative Sequence 3300006847|Ga0075431_100011229|Ga0075431_10001122911
Length 417
Sequence MGQDRQGGMRGQKDSLPSPIVGRGRSPDFPFSPYGEKVPGGADEGHFDRPMQHRAMTEAAVALRDVTLSYGDYVAVDRVSLDFPKGAFVTLLGPSGCGKTTILRSIAGLVQPSSGDIHVAGRRVNDIPIHKRNIGLVFQNYALFPHKTVFDNIAFGLKYRNVERSVAAAKVKRALDMVRLPGVERKLPSELSGGQQQRIALARAIVIEPDVLLLDEPLSALDANLREEMRTELKIIQREVGITTIFVTHDQEEALAMSDRIVVMNHGKVEQTGTPESVYRAPASRFVASFLGQSNLLPGRVASIDDGIALVTIDRGPELAVAAPAGLKEGSAVTVVVRAQRVHVGPPEAAQPNHLPGTIANTSFLGGTASYLIDVAGLTMIANTMIADRVWREGDRVSVTVMPADCVLLDENGYRIA

Samples

Sample ID Description Type Environment
1 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
4 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
5 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
6 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
7 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
8 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
9 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
10 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
11 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
12 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
13 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
14 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
15 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
16 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
17 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
18 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
19 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
20 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
26 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
28 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
29 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
30 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
31 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
32 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
33 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
34 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
35 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
36 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
37 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
38 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
39 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
40 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
41 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
42 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
43 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
44 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
45 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
46 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
47 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
48 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
49 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
50 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
51 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
52 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
53 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
54 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
55 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
56 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
57 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
58 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
59 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
60 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
61 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
62 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
63 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
64 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
65 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
66 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
67 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
68 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
69 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
70 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
71 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
72 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
73 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
74 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
75 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
76 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
77 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
78 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
79 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
80 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
81 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
82 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
83 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
84 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
85 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
86 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
87 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
88 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
89 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
90 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
91 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
92 2597490356 Azospirillum brasilense sp7 Isolate Unclassified
93 2643221618 Ensifer sp. Root231 Isolate Unclassified
94 2643221626 Ensifer sp. Root31 Isolate Unclassified
95 2643221655 Ensifer sp. Root1252 Isolate Unclassified
96 2643221659 Ensifer sp. Root127 Isolate Unclassified
97 2643221698 Ensifer sp. Root142 Isolate Unclassified
98 2643221712 Ensifer sp. Root258 Isolate Unclassified
99 2740891818 Desulfofaba hansenii DSM 12642 Isolate Unclassified
100 2751185800 Brucella pituitosa AA2 Isolate Unclassified
101 2758568016 [Ochrobactrum] quorumnocens A44 Isolate Rhizosphere
102 2837651117 Pseudohoeflea suaedae YC6898 Isolate Unclassified
103 2844163670 Ensifer sp. 1H6 Isolate Unclassified
104 2846952575 Azospirillum brasilense sp7 Isolate Unclassified
105 2848858292 Azospirillum brasilense Az39 Isolate Unclassified
106 2883291878 Hypericibacter terrae R5913 Isolate Rhizosphere
107 2883354860 Hypericibacter adhaerens R5959 Isolate Rhizosphere
108 2909042592 Labrys sp. LIt4 Isolate Nodule
109 2915650412 Ochrobactrum sp. CM-21-5 Isolate Rhizosphere
110 2935703347 Bradyrhizobium sp. LA6.10 Isolate Nodule
111 2941499720 Ensifer sp. 4252 Isolate Rhizosphere
112 2989771324 Rhizobium rhizolycopersici DBTS2 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 87.89
Metatranscriptomes 0.53
Isolates 11.58

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.74
Nodule 1.05
Rhizoplane 1.05
Rhizosphere 77.89
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075431_100011229 3300006847 Bacteria 9021
2 JGI24740J21852_10029903 3300001979 Bacteria 1782
3 JGI25153J46596_10000225 3300003215 Bacteria 48544
4 Ga0070713_100003237 3300005436 Bacteria 10732
5 Ga0070681_10249453 3300005458 Bacteria 1688
6 Ga0070707_100019884 3300005468 Bacteria 6329
7 Ga0070698_100183735 3300005471 Bacteria 2029
8 Ga0070699_100195795 3300005518 Bacteria 1796
9 Ga0070684_100137110 3300005535 Bacteria 2211
10 Ga0070697_100090414 3300005536 Bacteria 2530
11 Ga0070696_100115362 3300005546 Bacteria 1938
12 Ga0068861_100177969 3300005719 Bacteria 1768
13 Ga0070712_100064493 3300006175 Bacteria 2598
14 Ga0075428_100367013 3300006844 Bacteria 1544
15 Ga0075433_10240039 3300006852 Bacteria 1609
16 Ga0114129_10202912 3300009147 Bacteria 2684
17 Ga0105237_10242671 3300009545 Bacteria 1803
18 Ga0209758_1000648 3300025297 Bacteria 52785
19 Ga0209758_1022096 3300025297 Bacteria 2935
20 Ga0209257_1002026 3300025304 Bacteria 21652
21 Ga0207684_10067535 3300025910 Bacteria 3039
22 Ga0207684_10147315 3300025910 Bacteria 2025
23 Ga0207693_10072321 3300025915 Bacteria 2700
24 Ga0207646_10013993 3300025922 Bacteria 7638
25 Ga0207694_10060774 3300025924 Bacteria 2941
26 Ga0207700_10024123 3300025928 Bacteria 4205
27 Ga0207428_10066943 3300027907 Bacteria 2829
28 Ga0268266_10003641 3300028379 Bacteria 15245
29 Ga0268265_10029370 3300028380 Bacteria 3945
30 Ga0265338_10007601 3300028800 Bacteria 13386
31 Ga0265327_10044926 3300031251 Bacteria 2351
32 Ga0307508_10049388 3300031616 Bacteria 3747
33 Ga0307508_10066646 3300031616 Bacteria 3169
34 Ga0307508_10092334 3300031616 Bacteria 2616
35 Ga0316575_10004104 3300031665 Bacteria 5105
36 Ga0316575_10005073 3300031665 Bacteria 4668
37 Ga0316575_10008643 3300031665 Bacteria 3712
38 Ga0316579_10007087 3300031691 Bacteria 4612
39 Ga0316579_10035150 3300031691 Bacteria 2309
40 Ga0316576_10001470 3300031727 Bacteria 12670
41 Ga0316576_10022754 3300031727 Bacteria 4357
42 Ga0316576_10031000 3300031727 Bacteria 3791
43 Ga0316576_10032315 3300031727 Bacteria 3718
44 Ga0316576_10037943 3300031727 Bacteria 3452
45 Ga0316576_10068088 3300031727 Bacteria 2622
46 Ga0316576_10070109 3300031727 Bacteria 2585
47 Ga0316578_10000488 3300031728 Bacteria 13378
48 Ga0316578_10006225 3300031728 Bacteria 5867
49 Ga0316578_10006645 3300031728 Bacteria 5727
50 Ga0316578_10007216 3300031728 Bacteria 5551
51 Ga0316578_10034619 3300031728 Bacteria 2900
52 Ga0316578_10039987 3300031728 Bacteria 2709
53 Ga0307516_10208283 3300031730 Bacteria 1671
54 Ga0316577_10038440 3300031733 Bacteria 2677
55 Ga0316577_10041877 3300031733 Bacteria 2563
56 Ga0307410_10076203 3300031852 Bacteria 2341
57 Ga0307416_100233355 3300032002 Bacteria 1776
58 Ga0316583_10003205 3300032133 Bacteria 5753
59 Ga0316583_10033298 3300032133 Bacteria 1831
60 Ga0316583_10033394 3300032133 Bacteria 1827
61 Ga0316585_10003107 3300032137 Bacteria 4533
62 Ga0316585_10006881 3300032137 Bacteria 3263
63 Ga0316580_10003108 3300032139 Bacteria 4684
64 Ga0316580_10004125 3300032139 Bacteria 4187
65 Ga0316596_1006894 3300033541 Bacteria 2661
66 Ga0316574_0104136 3300035398 Bacteria 1816
67 Ga0316582_0000160 3300036647 Bacteria 20485
68 Ga0316582_0004615 3300036647 Bacteria 6987
69 Ga0316582_0013835 3300036647 Bacteria 4556
70 Ga0316582_0019337 3300036647 Bacteria 3984
71 Ga0316582_0021821 3300036647 Bacteria 3791
72 Ga0316582_0022148 3300036647 Bacteria 3768
73 Ga0316582_0059278 3300036647 Bacteria 2451
74 Ga0316584_0004495 3300036712 Bacteria 9232
75 Ga0316584_0012340 3300036712 Bacteria 6024
76 Ga0316584_0013557 3300036712 Bacteria 5774
77 Ga0316584_0064814 3300036712 Bacteria 2736
78 Ga0316584_0292618 3300036712 Bacteria 1181
79 Ga0316581_0020036 3300037588 Bacteria 1956
80 Ga0400488_17725 3300038741 Bacteria 2652
81 Ga0400488_23683 3300038741 Bacteria 10178
82 Ga0400483_106860 3300039062 Bacteria 4411
83 Ga0400483_195572 3300039062 Bacteria 4830
84 Ga0400483_203521 3300039062 Bacteria 1363
85 Ga0400483_215986 3300039062 Bacteria 2077
86 Ga0400489_52247 3300039093 Bacteria 37995
87 Ga0400489_76974 3300039093 Bacteria 25095
88 Ga0439453_0001402 3300041408 Bacteria 3081
89 Ga0439435_0039689 3300042436 Bacteria 1312
90 Ga0466960_0081067 3300044901 Bacteria 1635
91 Ga0495613_0150674 3300046689 Bacteria 1659
92 Ga0496101_0060194 3300048904 Bacteria 2755
93 Ga0496104_0038578 3300048907 Bacteria 4471
94 Ga0496122_0016068 3300048925 Bacteria 7114
95 Ga0496125_0000171 3300048928 Bacteria 145308
96 Ga0496125_0008415 3300048928 Bacteria 10805
97 Ga0501031_0038495 3300049568 Bacteria 3121
98 Ga0501032_0018798 3300049569 Bacteria 4836
99 Ga0501032_0025350 3300049569 Bacteria 4088
100 Ga0501032_0188100 3300049569 Bacteria 1350
101 Ga0501033_0000441 3300049570 Bacteria 39704
102 Ga0501033_0036866 3300049570 Bacteria 3662
103 Ga0501034_0023936 3300049571 Bacteria 6214
104 Ga0501034_0039227 3300049571 Bacteria 4797
105 Ga0501036_0003225 3300049572 Bacteria 13014
106 Ga0501036_0055398 3300049572 Bacteria 3359
107 Ga0501036_0211655 3300049572 Bacteria 1629
108 Ga0501037_0001257 3300049573 Bacteria 18660
109 Ga0501037_0002257 3300049573 Bacteria 13928
110 Ga0501037_0212373 3300049573 Bacteria 1364
111 Ga0501038_0004551 3300049574 Bacteria 12903
112 Ga0501039_0041067 3300049575 Bacteria 3571
113 Ga0501043_0000084 3300049579 Bacteria 84010
114 Ga0501043_0007632 3300049579 Bacteria 8571
115 Ga0501043_0051399 3300049579 Bacteria 3238
116 Ga0501043_0092550 3300049579 Bacteria 2377
117 Ga0501046_0019073 3300049580 Bacteria 5692
118 Ga0501046_0044492 3300049580 Bacteria 3531
119 Ga0501046_0266972 3300049580 Bacteria 1256
120 Ga0501047_0019075 3300049581 Bacteria 6580
121 Ga0501048_0020645 3300049582 Bacteria 4829
122 Ga0501048_0029334 3300049582 Bacteria 3990
123 Ga0501048_0111382 3300049582 Bacteria 1932
124 Ga0501067_0052020 3300049583 Bacteria 2269
125 Ga0501068_0033262 3300049584 Bacteria 3070
126 Ga0501069_0000026 3300049585 Bacteria 109293
127 Ga0501069_0025749 3300049585 Bacteria 3216
128 Ga0501070_0000043 3300049586 Bacteria 109293
129 Ga0501070_0010983 3300049586 Bacteria 7644
130 Ga0501070_0023038 3300049586 Bacteria 5214
131 Ga0501070_0225468 3300049586 Bacteria 1536
132 Ga0501070_0311119 3300049586 Bacteria 1282
133 Ga0501071_0030195 3300049587 Bacteria 3832
134 Ga0501073_0014156 3300049589 Bacteria 5792
135 Ga0501073_0023113 3300049589 Bacteria 4469
136 Ga0501073_0039187 3300049589 Bacteria 3358
137 Ga0501073_0041825 3300049589 Bacteria 3237
138 Ga0501074_0000132 3300049590 Bacteria 38468
139 Ga0501074_0014136 3300049590 Bacteria 5804
140 Ga0501076_0183168 3300049592 Bacteria 1708
141 Ga0501080_0000798 3300049742 Bacteria 25770
142 Ga0501080_0007947 3300049742 Bacteria 9610
143 Ga0501080_0028648 3300049742 Bacteria 5184
144 Ga0501080_0384382 3300049742 Bacteria 1264
145 Ga0501081_0210212 3300049743 Bacteria 1413
146 Ga0501083_0000216 3300049744 Bacteria 37354
147 Ga0501083_0005387 3300049744 Bacteria 9056
148 Ga0501083_0009742 3300049744 Bacteria 6785
149 Ga0501083_0009922 3300049744 Bacteria 6722
150 Ga0501083_0134951 3300049744 Bacteria 1617
151 Ga0501035_0000092 3300049822 Bacteria 111685
152 Ga0501035_0004989 3300049822 Bacteria 12571
153 Ga0501044_0000254 3300049823 Bacteria 67556
154 Ga0501044_0005963 3300049823 Bacteria 13484
155 Ga0501044_0044821 3300049823 Bacteria 4587
156 Ga0501044_0152083 3300049823 Bacteria 2296
157 Ga0501044_0303775 3300049823 Bacteria 1524
158 Ga0501044_0431237 3300049823 Bacteria 1227
159 nmdc:mga05p37_124698_c1 3300050507 Bacteria 3163
160 nmdc:mga06r32_244739_c1 3300050510 Bacteria 1781
161 Ga0500578_0015459 3300053086 Bacteria 4904
162 Ga0500651_0006935 3300053093 Bacteria 6571
163 Ga0500555_001749 3300053103 Bacteria 6496
164 Ga0500568_0024945 3300053139 Bacteria 2526
165 Ga0500616_0002299 3300053153 Bacteria 16156
166 Ga0501084_0030996 3300054114 Bacteria 4472
167 Ga0501082_0009762 3300060353 Bacteria 8268
168 Ga0501082_0135455 3300060353 Bacteria 2137
169 2599101001 2597490356 Bacteria 7030811
170 2599104130 2597490356 Bacteria 7030811
171 2644108259 2643221618 Bacteria 7717186
172 2644145813 2643221626 Bacteria 8069654
173 2644307292 2643221655 Bacteria 7722067
174 2644331308 2643221659 Bacteria 7890716
175 2644541324 2643221698 Bacteria 7756764
176 2644613381 2643221712 Bacteria 7729434
177 2740993872 2740891818 Bacteria 6711283
178 2753357870 2751185800 Bacteria 5467370
179 2758640468 2758568016 Bacteria 5645291
180 2837652215 2837651117 Bacteria 3772164
181 2844167034 2844163670 Bacteria 7266046
182 2846957171 2846952575 Bacteria 6587527
183 2848863698 2848858292 Bacteria 7391279
184 2883293857 2883291878 Bacteria 5894118
185 2883357628 2883354860 Bacteria 5865246
186 2909044420 2909042592 Bacteria 6499737
187 2915652240 2915650412 Bacteria 4288180
188 2935711282 2935703347 Bacteria 10242284
189 2941502798 2941499720 Bacteria 7599444
190 2989776152 2989771324 Bacteria 5605128
191 Ga0075431_100011229
192 JGI24740J21852_10029903
193 JGI25153J46596_10000225
194 Ga0070713_100003237
195 Ga0070681_10249453
196 Ga0070707_100019884
197 Ga0070698_100183735
198 Ga0070699_100195795
199 Ga0070684_100137110
200 Ga0070697_100090414
201 Ga0070696_100115362
202 Ga0068861_100177969
203 Ga0070712_100064493
204 Ga0075428_100367013
205 Ga0075433_10240039
206 Ga0114129_10202912
207 Ga0105237_10242671
208 Ga0209758_1000648
209 Ga0209758_1022096
210 Ga0209257_1002026
211 Ga0207684_10067535
212 Ga0207684_10147315
213 Ga0207693_10072321
214 Ga0207646_10013993
215 Ga0207694_10060774
216 Ga0207700_10024123
217 Ga0207428_10066943
218 Ga0268266_10003641
219 Ga0268265_10029370
220 Ga0265338_10007601
221 Ga0265327_10044926
222 Ga0307508_10049388
223 Ga0307508_10066646
224 Ga0307508_10092334
225 Ga0316575_10004104
226 Ga0316575_10005073
227 Ga0316575_10008643
228 Ga0316579_10007087
229 Ga0316579_10035150
230 Ga0316576_10001470
231 Ga0316576_10022754
232 Ga0316576_10031000
233 Ga0316576_10032315
234 Ga0316576_10037943
235 Ga0316576_10068088
236 Ga0316576_10070109
237 Ga0316578_10000488
238 Ga0316578_10006225
239 Ga0316578_10006645
240 Ga0316578_10007216
241 Ga0316578_10034619
242 Ga0316578_10039987
243 Ga0307516_10208283
244 Ga0316577_10038440
245 Ga0316577_10041877
246 Ga0307410_10076203
247 Ga0307416_100233355
248 Ga0316583_10003205
249 Ga0316583_10033298
250 Ga0316583_10033394
251 Ga0316585_10003107
252 Ga0316585_10006881
253 Ga0316580_10003108
254 Ga0316580_10004125
255 Ga0316596_1006894
256 Ga0316574_0104136
257 Ga0316582_0000160
258 Ga0316582_0004615
259 Ga0316582_0013835
260 Ga0316582_0019337
261 Ga0316582_0021821
262 Ga0316582_0022148
263 Ga0316582_0059278
264 Ga0316584_0004495
265 Ga0316584_0012340
266 Ga0316584_0013557
267 Ga0316584_0064814
268 Ga0316584_0292618
269 Ga0316581_0020036
270 Ga0400488_17725
271 Ga0400488_23683
272 Ga0400483_106860
273 Ga0400483_195572
274 Ga0400483_203521
275 Ga0400483_215986
276 Ga0400489_52247
277 Ga0400489_76974
278 Ga0439453_0001402
279 Ga0439435_0039689
280 Ga0466960_0081067
281 Ga0495613_0150674
282 Ga0496101_0060194
283 Ga0496104_0038578
284 Ga0496122_0016068
285 Ga0496125_0000171
286 Ga0496125_0008415
287 Ga0501031_0038495
288 Ga0501032_0018798
289 Ga0501032_0025350
290 Ga0501032_0188100
291 Ga0501033_0000441
292 Ga0501033_0036866
293 Ga0501034_0023936
294 Ga0501034_0039227
295 Ga0501036_0003225
296 Ga0501036_0055398
297 Ga0501036_0211655
298 Ga0501037_0001257
299 Ga0501037_0002257
300 Ga0501037_0212373
301 Ga0501038_0004551
302 Ga0501039_0041067
303 Ga0501043_0000084
304 Ga0501043_0007632
305 Ga0501043_0051399
306 Ga0501043_0092550
307 Ga0501046_0019073
308 Ga0501046_0044492
309 Ga0501046_0266972
310 Ga0501047_0019075
311 Ga0501048_0020645
312 Ga0501048_0029334
313 Ga0501048_0111382
314 Ga0501067_0052020
315 Ga0501068_0033262
316 Ga0501069_0000026
317 Ga0501069_0025749
318 Ga0501070_0000043
319 Ga0501070_0010983
320 Ga0501070_0023038
321 Ga0501070_0225468
322 Ga0501070_0311119
323 Ga0501071_0030195
324 Ga0501073_0014156
325 Ga0501073_0023113
326 Ga0501073_0039187
327 Ga0501073_0041825
328 Ga0501074_0000132
329 Ga0501074_0014136
330 Ga0501076_0183168
331 Ga0501080_0000798
332 Ga0501080_0007947
333 Ga0501080_0028648
334 Ga0501080_0384382
335 Ga0501081_0210212
336 Ga0501083_0000216
337 Ga0501083_0005387
338 Ga0501083_0009742
339 Ga0501083_0009922
340 Ga0501083_0134951
341 Ga0501035_0000092
342 Ga0501035_0004989
343 Ga0501044_0000254
344 Ga0501044_0005963
345 Ga0501044_0044821
346 Ga0501044_0152083
347 Ga0501044_0303775
348 Ga0501044_0431237
349 nmdc:mga05p37_124698_c1
350 nmdc:mga06r32_244739_c1
351 Ga0500578_0015459
352 Ga0500651_0006935
353 Ga0500555_001749
354 Ga0500568_0024945
355 Ga0500616_0002299
356 Ga0501084_0030996
357 Ga0501082_0009762
358 Ga0501082_0135455
359 2599101001
360 2599104130
361 2644108259
362 2644145813
363 2644307292
364 2644331308
365 2644541324
366 2644613381
367 2740993872
368 2753357870
369 2758640468
370 2837652215
371 2844167034
372 2846957171
373 2848863698
374 2883293857
375 2883357628
376 2909044420
377 2915652240
378 2935711282
379 2941502798
380 2989776152

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

76

219

0.96

PF08402

TOBE_2

TOBE domain

335

409

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
7ahe-assembly1.cif.gz_C opua inhibited inward facing 0.922 28 220
4tqu-assembly1.cif.gz_T crystal structure of a bacterial abc transporter involved in the import of the acidic polysaccharide alginate 0.9151 7 346
7ahc-assembly1.cif.gz_C opua apo inward-facing 0.9058 25 217
4jbw-assembly1.cif.gz_A crystal structure of e. coli maltose transporter malfgk2 in complex with its regulatory protein eiiaglc 0.9055 5 345
6z67-assembly2.cif.gz_B ftse structure of streptococcus pneumoniae in complex with amppnp at 2.4 a resolution 0.9053 5 205
ID Description Score Start End Superfamily
2awnC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9595 24 222 3.40.50.300
af_P77795_1_218_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9549 6 204 3.40.50.300
af_Q2G089_1_236_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9294 7 221 3.40.50.300
af_P33360_1_239_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9255 7 220 3.40.50.300
af_P77481_300_342_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9153 286 324 2.40.50.140
ID Description Score Start End GO Terms
AF-A0A371MRW7-F1-model_v4 ABC transporter ATP-binding protein 0.9543 49 136 GO:0005524
GO:0016887
GO:0055052
AF-A0A382FBJ4-F1-model_v4 ABC transporter domain-containing protein 0.9474 62 202 GO:0005524
GO:0005886
GO:0016887
GO:0022857
AF-A0A7X9BG07-F1-model_v4 ABC transporter ATP-binding protein 0.9418 5 173 GO:0005524
GO:0005886
GO:0015408
GO:0016887
AF-A0A371MRW7-F1-model_v4 ABC transporter ATP-binding protein 0.934 49 136 GO:0005524
GO:0016887
GO:0055052
AF-A0A524B8W3-F1-model_v4 ABC transporter 0.9338 5 188 GO:0005524
GO:0016887

Map