F292245

General Info

Members Datasets Scaffolds Average Seq Length
190 116 380 473

Family's Representative Sequence

Representative Sequence 3300005937|Ga0081455_10032602|Ga0081455_100326023
Length 520
Sequence MSSSPVEPADLIDLKLLPAWVKEPVEPSSYEHYTGEEGEAPRDGRRPPRDKRDRNFKRSTFKAQRPFQARKTDADEPRKVGRGSERVRERGRPPRRTSSKAEVGGARRRMDHGENRHSRDRRSPVSRKPLEITIRFLPSSRIFENVAAQIKSGSVAYSVFALARLFLEKPERYEVRLTTKAESPLYQLGENGAVSLNREFLEGNAFRLAHEDFYKIDITQSDPIKGNFSNVARCRLSGTLLGPTNHHNYQPQLRTLYEQRFSRRMSFADYQRQIEIVNDPALIERWKEQARTVTTFKTRNDERSSTFPSAAEAERHFRSNYLPGLVRTVEAVTVSGVLSRRLPDRMLNRALEDAWTHETRSPSNMMQELAGRLRQAGLNVFRHRRGMLFVSPIRVRLFIHAQAEVSPSVNAILQILAGTPRTNRKELFEKLITDVATKEVESRKLALASDLRWLINEGYLIEFNDGSLDLPRGKAKPQEGAAAAEPAPTLSNGSTAEPTEQALATMGEAPIPSELEIGGS

Samples

Sample ID Description Type Environment
1 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
2 3300000545 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNX_Illumina_Assembled Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
6 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
8 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
12 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
19 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
20 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
21 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
22 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
25 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
26 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
27 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
28 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
29 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
30 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
31 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
32 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
33 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
34 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
35 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
36 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
37 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
38 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
39 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
40 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
41 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
42 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
43 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
44 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
45 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
48 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
50 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
51 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
52 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
53 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
54 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
55 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
56 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
57 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
58 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
59 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
60 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
61 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
86 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
87 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
88 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
89 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
90 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
91 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
92 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
93 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
94 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
95 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
96 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
97 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
98 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
99 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
100 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
101 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
102 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
103 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
104 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
105 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
106 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
107 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
108 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
109 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
110 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
111 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
112 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
113 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
114 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
115 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
116 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 7.37
Rhizosphere 92.11
Stem 0
Stem Tuber 0
Unclassified 7.37

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0081455_10032602 3300005937 Bacteria 4692
2 CNXas_1000097 3300000545 Bacteria 16032
3 JGI25406J46586_10000976 3300003203 Bacteria 13434
4 Ga0065704_10079762 3300005289 Bacteria 4083
5 Ga0065712_10004344 3300005290 Bacteria 3727
6 Ga0065715_10000511 3300005293 Bacteria 10778
7 Ga0065715_10100767 3300005293 Bacteria 3271
8 Ga0070676_10002928 3300005328 Bacteria 8815
9 Ga0070690_100034283 3300005330 Bacteria 3180
10 Ga0068868_100037116 3300005338 Bacteria 3775
11 Ga0070660_100044045 3300005339 Bacteria 3411
12 Ga0070660_100051082 3300005339 Bacteria 3183
13 Ga0070687_100012288 3300005343 Bacteria 3776
14 Ga0070661_100018988 3300005344 Bacteria 4895
15 Ga0070669_100016990 3300005353 Bacteria 5195
16 Ga0070675_100001509 3300005354 Bacteria 17186
17 Ga0070675_100012173 3300005354 Bacteria 6745
18 Ga0070675_100042482 3300005354 Bacteria 3714
19 Ga0070688_100008995 3300005365 Bacteria 5443
20 Ga0070688_100014902 3300005365 Bacteria 4412
21 Ga0070688_100051469 3300005365 Bacteria 2569
22 Ga0070659_100020238 3300005366 Bacteria 5052
23 Ga0070667_100011546 3300005367 Bacteria 7302
24 Ga0070714_100200554 3300005435 Bacteria 1825
25 Ga0070713_100058358 3300005436 Bacteria 3218
26 Ga0070713_100127332 3300005436 Bacteria 2242
27 Ga0070701_10009498 3300005438 Bacteria 4262
28 Ga0070705_100078493 3300005440 Unclassified 2019
29 Ga0070708_100003720 3300005445 Bacteria 11964
30 Ga0070708_100011419 3300005445 Bacteria 7229
31 Ga0070662_100001580 3300005457 Bacteria 14070
32 Ga0070681_10057225 3300005458 Bacteria 3879
33 Ga0070685_10043123 3300005466 Bacteria 2578
34 Ga0070685_10099986 3300005466 Bacteria 1770
35 Ga0070706_100030253 3300005467 Unclassified 4988
36 Ga0070706_100030575 3300005467 Bacteria 4963
37 Ga0070706_100225811 3300005467 Bacteria 1748
38 Ga0070707_100018908 3300005468 Bacteria 6488
39 Ga0070707_100025166 3300005468 Bacteria 5644
40 Ga0070707_100038062 3300005468 Unclassified 4593
41 Ga0070707_100087284 3300005468 Unclassified 3017
42 Ga0070698_100023371 3300005471 Bacteria 6463
43 Ga0070698_100036499 3300005471 Bacteria 5076
44 Ga0070679_100077538 3300005530 Bacteria 3312
45 Ga0070684_100007280 3300005535 Bacteria 8602
46 Ga0070684_100086281 3300005535 Bacteria 2785
47 Ga0070697_100000699 3300005536 Bacteria 25148
48 Ga0070697_100009771 3300005536 Bacteria 7484
49 Ga0070697_100019645 3300005536 Bacteria 5337
50 Ga0070697_100021093 3300005536 Bacteria 5159
51 Ga0070697_100034246 3300005536 Unclassified 4094
52 Ga0070697_100034859 3300005536 Bacteria 4059
53 Ga0070697_100094268 3300005536 Bacteria 2480
54 Ga0070686_100007629 3300005544 Bacteria 6044
55 Ga0070695_100034045 3300005545 Unclassified 3191
56 Ga0070665_100020293 3300005548 Bacteria 6673
57 Ga0070665_100023029 3300005548 Bacteria 6273
58 Ga0070704_100007857 3300005549 Bacteria 6365
59 Ga0068856_100041874 3300005614 Bacteria 4503
60 Ga0068859_100022627 3300005617 Bacteria 6302
61 Ga0068863_100041792 3300005841 Bacteria 4358
62 Ga0068858_100018605 3300005842 Bacteria 6504
63 Ga0068860_100011763 3300005843 Bacteria 8625
64 Ga0068862_100011084 3300005844 Bacteria 7448
65 Ga0068862_100241389 3300005844 Bacteria 1643
66 Ga0081455_10001899 3300005937 Bacteria 25143
67 Ga0081455_10003063 3300005937 Bacteria 19478
68 Ga0081455_10003193 3300005937 Bacteria 19003
69 Ga0081455_10023526 3300005937 Bacteria 5731
70 Ga0081455_10035518 3300005937 Bacteria 4452
71 Ga0081455_10041741 3300005937 Bacteria 4031
72 Ga0081455_10085610 3300005937 Bacteria 2570
73 Ga0081540_1000057 3300005983 Bacteria 121566
74 Ga0081540_1023742 3300005983 Bacteria 3576
75 Ga0081539_10000139 3300005985 Bacteria 170623
76 Ga0081539_10031541 3300005985 Bacteria 3264
77 Ga0070717_10006113 3300006028 Bacteria 8843
78 Ga0097621_100141517 3300006237 Bacteria 2056
79 Ga0097620_100022627 3300006931 Bacteria 6302
80 Ga0105245_10072314 3300009098 Bacteria 3132
81 Ga0105245_10089560 3300009098 Bacteria 2829
82 Ga0114129_10002693 3300009147 Bacteria 24721
83 Ga0105241_10127630 3300009174 Bacteria 2055
84 Ga0105249_10005644 3300009553 Bacteria 10828
85 Ga0105249_10050643 3300009553 Bacteria 3786
86 Ga0105239_10020017 3300010375 Bacteria 7384
87 Ga0105239_10080069 3300010375 Bacteria 3594
88 Ga0157369_10098833 3300013105 Bacteria 3111
89 Ga0157374_10056139 3300013296 Bacteria 3676
90 Ga0157374_10074319 3300013296 Bacteria 3210
91 Ga0157374_10094141 3300013296 Bacteria 2862
92 Ga0157374_10165397 3300013296 Bacteria 2156
93 Ga0157374_10230152 3300013296 Bacteria 1820
94 Ga0157378_10004018 3300013297 Bacteria 12987
95 Ga0157378_10027051 3300013297 Bacteria 5060
96 Ga0157378_10049588 3300013297 Bacteria 3735
97 Ga0157378_10124846 3300013297 Bacteria 2377
98 Ga0163162_10012601 3300013306 Bacteria 8258
99 Ga0163162_10047319 3300013306 Bacteria 4311
100 Ga0157372_10115643 3300013307 Bacteria 3075
101 Ga0157375_10010785 3300013308 Bacteria 8050
102 Ga0157375_10088016 3300013308 Bacteria 3160
103 Ga0157375_10103089 3300013308 Bacteria 2940
104 Ga0163163_10103428 3300014325 Bacteria 2873
105 Ga0163163_10108274 3300014325 Bacteria 2806
106 Ga0157379_10004631 3300014968 Bacteria 11804
107 Ga0157376_10041051 3300014969 Bacteria 3786
108 Ga0207697_10001975 3300025315 Bacteria 10866
109 Ga0207697_10003616 3300025315 Bacteria 7578
110 Ga0207697_10006253 3300025315 Bacteria 5412
111 Ga0207697_10008102 3300025315 Bacteria 4631
112 Ga0207647_10121087 3300025904 Bacteria 1543
113 Ga0207645_10001061 3300025907 Bacteria 22746
114 Ga0207684_10015933 3300025910 Bacteria 6459
115 Ga0207684_10017705 3300025910 Bacteria 6113
116 Ga0207684_10027724 3300025910 Unclassified 4824
117 Ga0207684_10046508 3300025910 Unclassified 3682
118 Ga0207693_10005851 3300025915 Bacteria 10204
119 Ga0207693_10008150 3300025915 Bacteria 8587
120 Ga0207693_10079292 3300025915 Bacteria 2569
121 Ga0207662_10002029 3300025918 Bacteria 10020
122 Ga0207657_10022414 3300025919 Bacteria 5909
123 Ga0207657_10076450 3300025919 Bacteria 2824
124 Ga0207649_10009962 3300025920 Bacteria 5208
125 Ga0207652_10046754 3300025921 Bacteria 3694
126 Ga0207646_10001506 3300025922 Bacteria 28666
127 Ga0207646_10024830 3300025922 Bacteria 5485
128 Ga0207646_10036446 3300025922 Unclassified 4440
129 Ga0207646_10037463 3300025922 Bacteria 4372
130 Ga0207646_10043842 3300025922 Unclassified 4015
131 Ga0207646_10051531 3300025922 Unclassified 3683
132 Ga0207646_10051643 3300025922 Bacteria 3678
133 Ga0207646_10125996 3300025922 Bacteria 2303
134 Ga0207646_10136757 3300025922 Bacteria 2206
135 Ga0207659_10012375 3300025926 Bacteria 5426
136 Ga0207659_10013549 3300025926 Bacteria 5227
137 Ga0207659_10044527 3300025926 Bacteria 3123
138 Ga0207706_10000683 3300025933 Bacteria 35576
139 Ga0207670_10015302 3300025936 Bacteria 4581
140 Ga0207704_10049497 3300025938 Bacteria 2529
141 Ga0207691_10019193 3300025940 Bacteria 6472
142 Ga0207661_10023175 3300025944 Bacteria 4688
143 Ga0207679_10043113 3300025945 Bacteria 3246
144 Ga0207712_10003519 3300025961 Bacteria 9888
145 Ga0207668_10008111 3300025972 Bacteria 6252
146 Ga0207703_10026488 3300026035 Bacteria 4564
147 Ga0207702_10049604 3300026078 Bacteria 3542
148 Ga0207641_10032948 3300026088 Bacteria 4304
149 Ga0268265_10053033 3300028380 Bacteria 3071
150 Ga0268265_10091166 3300028380 Bacteria 2437
151 Ga0268264_10040759 3300028381 Bacteria 3837
152 Ga0268264_10067350 3300028381 Bacteria 3022
153 Ga0307513_10024894 3300031456 Bacteria 6954
154 Ga0373943_0028093 3300035170 Bacteria 2649
155 Ga0373955_0075748 3300035172 Bacteria 1891
156 Ga0373931_0076938 3300035691 Bacteria 1834
157 Ga0373935_0012815 3300035692 Bacteria 5050
158 Ga0373935_0048087 3300035692 Bacteria 2700
159 Ga0373935_0059618 3300035692 Unclassified 2440
160 Ga0373947_0045704 3300035725 Unclassified 2621
161 Ga0395900_0135893 3300037418 Bacteria 2519
162 Ga0395901_0035274 3300038443 Bacteria 5168
163 Ga0439448_0008572 3300042005 Bacteria 2996
164 Ga0439455_0005705 3300042012 Bacteria 2543
165 Ga0466967_0089765 3300045976 Bacteria 2791
166 Ga0495592_0096201 3300046454 Bacteria 2116
167 Ga0495629_0090223 3300046459 Bacteria 2138
168 Ga0495628_0100521 3300046516 Bacteria 2232
169 Ga0495630_0143082 3300046517 Bacteria 1818
170 Ga0495599_0011787 3300046678 Bacteria 5374
171 Ga0495623_0009480 3300046679 Bacteria 6322
172 Ga0495646_0006335 3300046680 Bacteria 7505
173 Ga0495658_0049801 3300046683 Bacteria 2367
174 Ga0495602_0101536 3300048088 Bacteria 2359
175 Ga0496102_0086480 3300048905 Bacteria 2895
176 Ga0496102_0127536 3300048905 Bacteria 2379
177 Ga0496103_0075308 3300048906 Bacteria 2117
178 Ga0496104_0031019 3300048907 Bacteria 4969
179 Ga0496105_0039455 3300048908 Bacteria 3892
180 Ga0496108_0167299 3300048911 Bacteria 1901
181 Ga0496109_0114848 3300048912 Bacteria 2505
182 Ga0496110_0103344 3300048913 Bacteria 2556
183 Ga0496112_0152097 3300048915 Bacteria 2281
184 Ga0496114_0018469 3300048917 Bacteria 5638
185 Ga0496114_0028770 3300048917 Bacteria 4563
186 Ga0496115_0002505 3300048918 Bacteria 13201
187 Ga0496115_0035388 3300048918 Unclassified 3950
188 Ga0496115_0053697 3300048918 Bacteria 3234
189 Ga0495601_0014686 3300053077 Bacteria 4723
190 Ga0495595_0052073 3300053084 Bacteria 1899
191 Ga0081455_10032602
192 CNXas_1000097
193 JGI25406J46586_10000976
194 Ga0065704_10079762
195 Ga0065712_10004344
196 Ga0065715_10000511
197 Ga0065715_10100767
198 Ga0070676_10002928
199 Ga0070690_100034283
200 Ga0068868_100037116
201 Ga0070660_100044045
202 Ga0070660_100051082
203 Ga0070687_100012288
204 Ga0070661_100018988
205 Ga0070669_100016990
206 Ga0070675_100001509
207 Ga0070675_100012173
208 Ga0070675_100042482
209 Ga0070688_100008995
210 Ga0070688_100014902
211 Ga0070688_100051469
212 Ga0070659_100020238
213 Ga0070667_100011546
214 Ga0070714_100200554
215 Ga0070713_100058358
216 Ga0070713_100127332
217 Ga0070701_10009498
218 Ga0070705_100078493
219 Ga0070708_100003720
220 Ga0070708_100011419
221 Ga0070662_100001580
222 Ga0070681_10057225
223 Ga0070685_10043123
224 Ga0070685_10099986
225 Ga0070706_100030253
226 Ga0070706_100030575
227 Ga0070706_100225811
228 Ga0070707_100018908
229 Ga0070707_100025166
230 Ga0070707_100038062
231 Ga0070707_100087284
232 Ga0070698_100023371
233 Ga0070698_100036499
234 Ga0070679_100077538
235 Ga0070684_100007280
236 Ga0070684_100086281
237 Ga0070697_100000699
238 Ga0070697_100009771
239 Ga0070697_100019645
240 Ga0070697_100021093
241 Ga0070697_100034246
242 Ga0070697_100034859
243 Ga0070697_100094268
244 Ga0070686_100007629
245 Ga0070695_100034045
246 Ga0070665_100020293
247 Ga0070665_100023029
248 Ga0070704_100007857
249 Ga0068856_100041874
250 Ga0068859_100022627
251 Ga0068863_100041792
252 Ga0068858_100018605
253 Ga0068860_100011763
254 Ga0068862_100011084
255 Ga0068862_100241389
256 Ga0081455_10001899
257 Ga0081455_10003063
258 Ga0081455_10003193
259 Ga0081455_10023526
260 Ga0081455_10035518
261 Ga0081455_10041741
262 Ga0081455_10085610
263 Ga0081540_1000057
264 Ga0081540_1023742
265 Ga0081539_10000139
266 Ga0081539_10031541
267 Ga0070717_10006113
268 Ga0097621_100141517
269 Ga0097620_100022627
270 Ga0105245_10072314
271 Ga0105245_10089560
272 Ga0114129_10002693
273 Ga0105241_10127630
274 Ga0105249_10005644
275 Ga0105249_10050643
276 Ga0105239_10020017
277 Ga0105239_10080069
278 Ga0157369_10098833
279 Ga0157374_10056139
280 Ga0157374_10074319
281 Ga0157374_10094141
282 Ga0157374_10165397
283 Ga0157374_10230152
284 Ga0157378_10004018
285 Ga0157378_10027051
286 Ga0157378_10049588
287 Ga0157378_10124846
288 Ga0163162_10012601
289 Ga0163162_10047319
290 Ga0157372_10115643
291 Ga0157375_10010785
292 Ga0157375_10088016
293 Ga0157375_10103089
294 Ga0163163_10103428
295 Ga0163163_10108274
296 Ga0157379_10004631
297 Ga0157376_10041051
298 Ga0207697_10001975
299 Ga0207697_10003616
300 Ga0207697_10006253
301 Ga0207697_10008102
302 Ga0207647_10121087
303 Ga0207645_10001061
304 Ga0207684_10015933
305 Ga0207684_10017705
306 Ga0207684_10027724
307 Ga0207684_10046508
308 Ga0207693_10005851
309 Ga0207693_10008150
310 Ga0207693_10079292
311 Ga0207662_10002029
312 Ga0207657_10022414
313 Ga0207657_10076450
314 Ga0207649_10009962
315 Ga0207652_10046754
316 Ga0207646_10001506
317 Ga0207646_10024830
318 Ga0207646_10036446
319 Ga0207646_10037463
320 Ga0207646_10043842
321 Ga0207646_10051531
322 Ga0207646_10051643
323 Ga0207646_10125996
324 Ga0207646_10136757
325 Ga0207659_10012375
326 Ga0207659_10013549
327 Ga0207659_10044527
328 Ga0207706_10000683
329 Ga0207670_10015302
330 Ga0207704_10049497
331 Ga0207691_10019193
332 Ga0207661_10023175
333 Ga0207679_10043113
334 Ga0207712_10003519
335 Ga0207668_10008111
336 Ga0207703_10026488
337 Ga0207702_10049604
338 Ga0207641_10032948
339 Ga0268265_10053033
340 Ga0268265_10091166
341 Ga0268264_10040759
342 Ga0268264_10067350
343 Ga0307513_10024894
344 Ga0373943_0028093
345 Ga0373955_0075748
346 Ga0373931_0076938
347 Ga0373935_0012815
348 Ga0373935_0048087
349 Ga0373935_0059618
350 Ga0373947_0045704
351 Ga0395900_0135893
352 Ga0395901_0035274
353 Ga0439448_0008572
354 Ga0439455_0005705
355 Ga0466967_0089765
356 Ga0495592_0096201
357 Ga0495629_0090223
358 Ga0495628_0100521
359 Ga0495630_0143082
360 Ga0495599_0011787
361 Ga0495623_0009480
362 Ga0495646_0006335
363 Ga0495658_0049801
364 Ga0495602_0101536
365 Ga0496102_0086480
366 Ga0496102_0127536
367 Ga0496103_0075308
368 Ga0496104_0031019
369 Ga0496105_0039455
370 Ga0496108_0167299
371 Ga0496109_0114848
372 Ga0496110_0103344
373 Ga0496112_0152097
374 Ga0496114_0018469
375 Ga0496114_0028770
376 Ga0496115_0002505
377 Ga0496115_0035388
378 Ga0496115_0053697
379 Ga0495601_0014686
380 Ga0495595_0052073

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
3mq0-assembly1.cif.gz_A crystal structure of agobacterium tumefaciens repressor blcr 0.846 325 385
2quf-assembly1.cif.gz_A crystal structure of transcription factor axxa-pf0095 from pyrococcus furiosus 0.8403 319 384
2qww-assembly2.cif.gz_C crystal structure of multiple antibiotic-resistance repressor (marr) (yp_013417.1) from listeria monocytogenes 4b f2365 at 2.07 a resolution 0.8222 317 384
7bzh-assembly1.cif.gz_A solution structure of a dna binding protein from sulfolobus islandicus 0.8089 318 387
1lnw-assembly3.cif.gz_F crystal structure of the mexr repressor of the mexab-oprm multidrug efflux operon of pseudomonas aeruginosa 0.8068 314 385
ID Description Score Start End Superfamily
1bjaA00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8414 317 385 1.10.10.10
af_Q58651_380_469_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.7969 317 386 1.10.10.10
af_P77732_3_78_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.7907 315 385 1.10.10.10
2va8B03 Mainly Alpha;Orthogonal Bundle;Sec63 N-terminal domain-like fold; 0.7772 320 384 1.10.3380.30
2g9wB01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.7739 316 384 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A2V6JJS2-F1-model_v4 Uncharacterized protein 0.9256 22 384
AF-A0A2V6GI73-F1-model_v4 Uncharacterized protein 0.8813 22 396
AF-A0A7T8YJA2-F1-model_v4 deleted 0.8691 317 384
AF-A0A2V5SA12-F1-model_v4 Uncharacterized protein 0.8616 46 408
AF-A0A7W1MUH7-F1-model_v4 Uncharacterized protein 0.8608 33 430

Map