F291742

General Info

Members Datasets Scaffolds Average Seq Length
189 176 378 672

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2891562705|2891567479
Length 740
Sequence GPPGTPGSRGVHPAWLPDEAFRPIGSRRTLLCGGGPLAGTVHEEVASACARYGGSVRRRAAGPDEAPEAGADDGAGDGADEGGPYDLVLALTTAGPLPAVTETALAGFRRGPAPGDGPAVGPDIGPVIGTAGGDERIGDEGYVVARHEGVTVVLADSATGLLYGLFHLVRLGEEAFGAARPAEHHRPAARLRMLDHWDNVDVHPVMGQVERGYAGGSIFWRDGALRDDLTRVRAYGRLLAACGVNAVTVNNVNVHATETLLLTDRLRDVAAIADRLRPYGVRVHLSVNFAAPVALGGTATADPLDEDVRAWWAAVTARVYEAIPDFGGYVVKADSEGQPGPHAYGRDHADGANLLAEALAPFGGVVHWRAFVYNHRQDWRDRSTDRARAAYDHFTPLDGRFRDNVILQVKHGPIDFQVREPVSPVIAAMPRTRVAVELQVTQEYTGQQRHVCYLAPMWSEVLGFRPWGPAGPGVAHVVAGDVADGAAGGGLVGVSNVGDDPYWTGHPLAQANLYAFGRLAWAPSSDPAAILDEWIGLTFPAAAGGNDATGGDDGRLREALHEIMDDSCGTYERYTVPLGVGFMVRPGHHYGPDVDGYEYTPWGTYHFADRDGVGVDRTRATGTGFTGQYPPPWSEVYESLARCPDELLLFFHHVPYGHVLHDGTTVIQHIYDTHFAGVEEVERARLRWAELAGLVPDAPHARVRELFAEQLRCAEEWRDQVNAYFLRKSGVPDARGRRIP

Samples

Sample ID Description Type Environment
1 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
11 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
12 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
13 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
14 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
15 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
16 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
17 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
18 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
19 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
20 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
21 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
22 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
23 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
24 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
25 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
26 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
38 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
39 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
40 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
41 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
42 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
43 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
44 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
45 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
46 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
47 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
48 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
49 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
50 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
51 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
52 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
53 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
54 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
55 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
56 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
57 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
58 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
59 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
60 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
61 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
62 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
63 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
64 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
65 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
66 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
67 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
68 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
69 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
70 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
71 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
72 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
73 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
74 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
75 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
76 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
77 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
78 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
79 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
80 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
81 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
82 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
83 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
84 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
85 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
86 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
87 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
88 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
89 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
90 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
91 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
92 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
93 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
94 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
95 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
96 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
97 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
98 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
99 2891562705 Microbispora tritici MT50 Isolate Unclassified
100 2501939600 Micromonospora sp. L5 Isolate Unclassified
101 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
102 2585428059 Paenibacillus chondroitinus OK414 Isolate Rhizosphere
103 2643221647 Streptomyces sp. Root369 Isolate Unclassified
104 2643221676 Paenibacillus sp. Root444D2 Isolate Unclassified
105 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
106 2643221690 Cellulomonas sp. Root485 Isolate Unclassified
107 2643221714 Streptomyces sp. Root264 Isolate Unclassified
108 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
109 2675903060 Nonomuraea wenchangensis CGMCC 4.5598 Isolate Rhizosphere
110 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
111 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
112 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
113 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
114 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
115 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
116 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
117 2811994880 Cellulomonas sp. SLBN-39 Isolate Unclassified
118 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
119 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
120 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
121 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
122 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
123 2855683550 Micromonospora sp. RP3T Isolate Unclassified
124 2856741275 Microbispora triticiradicis NEAU-HRDPA2-9 Isolate Unclassified
125 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
126 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
127 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
128 2858882152 Micromonospora noduli MED15 Isolate Nodule
129 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
130 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
131 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
132 2862574272 Streptomyces sp. AcE210 Isolate Nodule
133 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
134 2867428634 Streptomyces sp. RP5T Isolate Unclassified
135 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
136 2868088558 Phytoactinopolyspora endophytica EGI 60009 Isolate Unclassified
137 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
138 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
139 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
140 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
141 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
142 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
143 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
144 2884693830 Nonomuraea phyllanthi WYY166 Isolate Unclassified
145 2884994152 Cellulomonas sp. H30R-01 Isolate Rhizosphere
146 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
147 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
148 2891554331 Microbispora sp. CL1-1 Isolate Unclassified
149 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
150 2895442618 Nonomuraea phyllanthi PA1-10 Isolate Unclassified
151 2902582711 Micromonospora sp. AP08 Isolate Unclassified
152 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
153 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
154 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
155 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
156 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
157 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
158 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
159 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
160 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
161 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
162 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
163 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
164 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
165 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
166 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
167 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
168 2978975091 Pantoea anthophila SORGH_AS 797 Isolate Unclassified
169 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
170 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
171 649633069 Micromonospora sp. L5 Isolate Unclassified
172 8003870546 Micromonospora tarensis STR1s_6 Isolate Rhizosphere
173 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
174 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
175 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
176 8054734606 Micromonospora hortensis NIE111 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 57.67
Metatranscriptomes 1.06
Isolates 41.27

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.12
Nodule 3.17
Rhizoplane 1.06
Rhizosphere 59.26
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0006562J51391_1030195 3300003578 Bacteria 6580
2 Ga0070683_100019001 3300005329 Bacteria 6097
3 Ga0070683_100135554 3300005329 Bacteria 2331
4 Ga0068869_100011202 3300005334 Bacteria 5875
5 Ga0070680_100065984 3300005336 Bacteria 2967
6 Ga0068868_100016550 3300005338 Bacteria 5480
7 Ga0070660_100009481 3300005339 Bacteria 6849
8 Ga0070675_100001184 3300005354 Bacteria 18944
9 Ga0070714_100003951 3300005435 Bacteria 11143
10 Ga0070713_100073458 3300005436 Bacteria 2895
11 Ga0070663_100008374 3300005455 Bacteria 6355
12 Ga0070679_100003557 3300005530 Bacteria 14278
13 Ga0070684_100100824 3300005535 Bacteria 2579
14 Ga0068855_100037175 3300005563 Bacteria 5792
15 Ga0070664_100027926 3300005564 Bacteria 4693
16 Ga0068857_100023269 3300005577 Bacteria 5452
17 Ga0068852_100061626 3300005616 Bacteria 3261
18 Ga0081540_1013544 3300005983 Bacteria 5294
19 Ga0081539_10000456 3300005985 Bacteria 86722
20 Ga0075367_10000057 3300006178 Bacteria 26977
21 Ga0111539_10026446 3300009094 Bacteria 7094
22 Ga0105241_10013782 3300009174 Bacteria 5922
23 Ga0171462_1001 3300013250 Bacteria 1135406
24 Ga0157377_10010345 3300014745 Bacteria 4612
25 Ga0183367_1001 3300015688 Bacteria 1225545
26 Ga0206353_11684857 3300020082 Bacteria 12484
27 Ga0207695_10042457 3300025913 Bacteria 4857
28 Ga0207671_10002360 3300025914 Bacteria 20315
29 Ga0207659_10007430 3300025926 Bacteria 6736
30 Ga0207700_10038737 3300025928 Bacteria 3463
31 Ga0207706_10003950 3300025933 Bacteria 14048
32 Ga0207689_10053098 3300025942 Bacteria 3339
33 Ga0207661_10002341 3300025944 Bacteria 13050
34 Ga0207679_10012155 3300025945 Bacteria 5605
35 Ga0207678_10016575 3300026067 Bacteria 6471
36 Ga0207674_10005811 3300026116 Bacteria 14636
37 Ga0207698_10015852 3300026142 Bacteria 5063
38 Ga0207428_10023479 3300027907 Bacteria 5187
39 Ga0307515_10000739 3300028794 Bacteria 75653
40 Ga0307515_10009596 3300028794 Bacteria 18692
41 Ga0307515_10083752 3300028794 Bacteria 4107
42 Ga0307512_10005212 3300030522 Bacteria 13701
43 Ga0307512_10060487 3300030522 Bacteria 2927
44 Ga0307513_10003586 3300031456 Bacteria 20986
45 Ga0307513_10095250 3300031456 Bacteria 3019
46 Ga0307508_10010407 3300031616 Bacteria 8512
47 Ga0307508_10011384 3300031616 Bacteria 8133
48 Ga0307514_10032429 3300031649 Bacteria 4181
49 Ga0307516_10004284 3300031730 Bacteria 17714
50 Ga0307516_10060879 3300031730 Bacteria 3666
51 Ga0307516_10091746 3300031730 Bacteria 2865
52 Ga0307516_10137188 3300031730 Bacteria 2219
53 Ga0307405_10013574 3300031731 Bacteria 4350
54 Ga0307406_10006878 3300031901 Bacteria 6297
55 Ga0307415_100000011 3300032126 Bacteria 84750
56 Ga0307415_100007281 3300032126 Bacteria 6043
57 Ga0307507_10000004 3300033179 Bacteria 289641
58 Ga0373951_0000022 3300035091 Bacteria 61753
59 Ga0373942_0000095 3300035207 Bacteria 19665
60 Ga0373962_0000599 3300035242 Bacteria 8143
61 Ga0395899_0014292 3300037312 Bacteria 6059
62 Ga0451843_1537445 3300041509 Bacteria 1845
63 Ga0439449_0003997 3300042007 Bacteria 5703
64 Ga0439457_001181 3300042014 Bacteria 7847
65 Ga0466961_0003723 3300044693 Bacteria 9523
66 Ga0466963_0096078 3300044694 Bacteria 2024
67 Ga0495638_0034550 3300046460 Bacteria 3228
68 Ga0495585_0003900 3300046492 Bacteria 9902
69 Ga0495606_0013927 3300046507 Bacteria 6311
70 Ga0495632_0045632 3300046519 Bacteria 2182
71 Ga0495668_0001059 3300046616 Bacteria 29132
72 Ga0495611_0017602 3300046648 Bacteria 3058
73 Ga0495625_0000446 3300046660 Bacteria 62028
74 Ga0495604_0002245 3300047317 Bacteria 15475
75 Ga0495626_0000163 3300048091 Bacteria 81615
76 Ga0496108_0000064 3300048911 Bacteria 118022
77 Ga0496112_0030175 3300048915 Bacteria 5246
78 Ga0496122_0001594 3300048925 Bacteria 35529
79 Ga0496125_0000066 3300048928 Bacteria 249043
80 Ga0501032_0001869 3300049569 Bacteria 16653
81 Ga0501033_0016365 3300049570 Bacteria 5615
82 Ga0501034_0003558 3300049571 Bacteria 17705
83 Ga0501036_0014402 3300049572 Bacteria 6584
84 Ga0501037_0003166 3300049573 Bacteria 11949
85 Ga0501038_0022296 3300049574 Bacteria 5676
86 Ga0501039_0010280 3300049575 Bacteria 7136
87 Ga0501040_0016105 3300049576 Bacteria 4944
88 Ga0501041_0003395 3300049577 Bacteria 9164
89 Ga0501043_0004495 3300049579 Bacteria 11329
90 Ga0501047_0002219 3300049581 Bacteria 18598
91 Ga0501047_0008216 3300049581 Bacteria 9851
92 Ga0501048_0004798 3300049582 Bacteria 10301
93 Ga0501067_0007574 3300049583 Bacteria 6035
94 Ga0501069_0021297 3300049585 Bacteria 3517
95 Ga0501070_0017394 3300049586 Bacteria 6035
96 Ga0501072_0017662 3300049588 Bacteria 5486
97 Ga0501073_0028626 3300049589 Bacteria 3980
98 Ga0501074_0009863 3300049590 Bacteria 6936
99 Ga0501076_0010269 3300049592 Bacteria 6941
100 Ga0501077_0012837 3300049593 Bacteria 5251
101 Ga0501079_0004106 3300049741 Bacteria 10773
102 Ga0501083_0002699 3300049744 Bacteria 12235
103 Ga0501035_0005975 3300049822 Bacteria 11461
104 Ga0501035_0006688 3300049822 Bacteria 10772
105 Ga0501044_0001425 3300049823 Bacteria 28056
106 Ga0501044_0052470 3300049823 Bacteria 4202
107 nmdc:mga08y16_6515_c1 3300050511 Bacteria 12244
108 Ga0500641_0014519 3300053096 Bacteria 2908
109 Ga0500573_0034602 3300053140 Bacteria 2915
110 Ga0500616_0002803 3300053153 Bacteria 14038
111 Ga0501082_0005118 3300060353 Bacteria 11417
112 2891567479 2891562705 Bacteria 8039471
113 2501943807 2501939600 Bacteria 6907073
114 2585307365 2582581313 Bacteria 10042643
115 2587739505 2585428059 Bacteria 8696589
116 2644264903 2643221647 Bacteria 10741251
117 2644422229 2643221676 Bacteria 8119172
118 2644442470 2643221678 Bacteria 9540101
119 2644505355 2643221690 Bacteria 4654705
120 2644626629 2643221714 Bacteria 9015452
121 2676483065 2675903059 Bacteria 8644972
122 2676492589 2675903060 Bacteria 10051191
123 2753073680 2751185734 Bacteria 8863695
124 2772646128 2772190715 Bacteria 6959372
125 2785372193 2784746768 Bacteria 10036182
126 2786673272 2786546132 Bacteria 10419719
127 2808844645 2808606359 Bacteria 9866990
128 2808914209 2808606375 Bacteria 9466072
129 2812355308 2811994879 Bacteria 9313447
130 2812363968 2811994880 Bacteria 4147780
131 2831935735 2831935698 Bacteria 5963223
132 2832008988 2832004796 Bacteria 6538017
133 2852638795 2852635781 Bacteria 8251373
134 2855670737 2855670206 Bacteria 7120389
135 2855677834 2855676851 Bacteria 7063653
136 2855683753 2855683550 Bacteria 7134265
137 2856742531 2856741275 Bacteria 8096094
138 2856863603 2856858025 Bacteria 7255264
139 2857289667 2857288857 Bacteria 7189066
140 2858849366 2858848962 Bacteria 6963058
141 2858882477 2858882152 Bacteria 7230291
142 2858894652 2858888857 Bacteria 7060307
143 2858895584 2858895516 Bacteria 7378898
144 2862284028 2862281513 Bacteria 9621493
145 2862583897 2862574272 Bacteria 10567477
146 2866066702 2866065130 Bacteria 6518152
147 2867429263 2867428634 Bacteria 9590268
148 2867511461 2867507094 Bacteria 6506033
149 2868093427 2868088558 Bacteria 7609351
150 2869051147 2869048445 Bacteria 6875584
151 2869066791 2869061728 Bacteria 7112407
152 2869069636 2869068681 Bacteria 7205615
153 2870723995 2870721527 Bacteria 9689237
154 2877678447 2877676314 Bacteria 9512378
155 2880490874 2880489317 Bacteria 7096270
156 2880501637 2880495981 Bacteria 7340502
157 2884698062 2884693830 Bacteria 11273186
158 2884996901 2884994152 Bacteria 4492978
159 2887481534 2887478801 Bacteria 8972725
160 2891402171 2891395885 Bacteria 9251614
161 2891557314 2891554331 Bacteria 8812224
162 2895430113 2895427314 Bacteria 13147766
163 2895445122 2895442618 Bacteria 11027144
164 2902584520 2902582711 Bacteria 6187705
165 2929223754 2929219909 Bacteria 6984360
166 2929230145 2929226422 Bacteria 7248583
167 2946070584 2946064051 Bacteria 8957905
168 2946078323 2946072368 Bacteria 8999607
169 2947226257 2947224130 Bacteria 9938529
170 2954383398 2954380949 Bacteria 10050426
171 2954679573 2954673503 Bacteria 9685905
172 2954684580 2954682443 Bacteria 9862841
173 2954694109 2954691527 Bacteria 10720516
174 2954709217 2954701450 Bacteria 10834262
175 2954713714 2954711539 Bacteria 10867210
176 2954723677 2954721474 Bacteria 10456478
177 2954738156 2954731030 Bacteria 10243860
178 2954742580 2954740390 Bacteria 10229294
179 2954757014 2954749733 Bacteria 10366972
180 2954761544 2954759201 Bacteria 9358192
181 2978978795 2978975091 Bacteria 4704313
182 3006326842 3006321560 Bacteria 8247479
183 3006499585 3006493962 Bacteria 8825450
184 649814633 649633069 Bacteria 6962533
185 8003872459 8003870546 Bacteria 7396674
186 8047714536 8047710418 Bacteria 11023148
187 8054705894 8054704163 Bacteria 7247792
188 8054728873 8054727385 Bacteria 7558670
189 8054734740 8054734606 Bacteria 6947278
190 Ga0006562J51391_1030195
191 Ga0070683_100019001
192 Ga0070683_100135554
193 Ga0068869_100011202
194 Ga0070680_100065984
195 Ga0068868_100016550
196 Ga0070660_100009481
197 Ga0070675_100001184
198 Ga0070714_100003951
199 Ga0070713_100073458
200 Ga0070663_100008374
201 Ga0070679_100003557
202 Ga0070684_100100824
203 Ga0068855_100037175
204 Ga0070664_100027926
205 Ga0068857_100023269
206 Ga0068852_100061626
207 Ga0081540_1013544
208 Ga0081539_10000456
209 Ga0075367_10000057
210 Ga0111539_10026446
211 Ga0105241_10013782
212 Ga0171462_1001
213 Ga0157377_10010345
214 Ga0183367_1001
215 Ga0206353_11684857
216 Ga0207695_10042457
217 Ga0207671_10002360
218 Ga0207659_10007430
219 Ga0207700_10038737
220 Ga0207706_10003950
221 Ga0207689_10053098
222 Ga0207661_10002341
223 Ga0207679_10012155
224 Ga0207678_10016575
225 Ga0207674_10005811
226 Ga0207698_10015852
227 Ga0207428_10023479
228 Ga0307515_10000739
229 Ga0307515_10009596
230 Ga0307515_10083752
231 Ga0307512_10005212
232 Ga0307512_10060487
233 Ga0307513_10003586
234 Ga0307513_10095250
235 Ga0307508_10010407
236 Ga0307508_10011384
237 Ga0307514_10032429
238 Ga0307516_10004284
239 Ga0307516_10060879
240 Ga0307516_10091746
241 Ga0307516_10137188
242 Ga0307405_10013574
243 Ga0307406_10006878
244 Ga0307415_100000011
245 Ga0307415_100007281
246 Ga0307507_10000004
247 Ga0373951_0000022
248 Ga0373942_0000095
249 Ga0373962_0000599
250 Ga0395899_0014292
251 Ga0451843_1537445
252 Ga0439449_0003997
253 Ga0439457_001181
254 Ga0466961_0003723
255 Ga0466963_0096078
256 Ga0495638_0034550
257 Ga0495585_0003900
258 Ga0495606_0013927
259 Ga0495632_0045632
260 Ga0495668_0001059
261 Ga0495611_0017602
262 Ga0495625_0000446
263 Ga0495604_0002245
264 Ga0495626_0000163
265 Ga0496108_0000064
266 Ga0496112_0030175
267 Ga0496122_0001594
268 Ga0496125_0000066
269 Ga0501032_0001869
270 Ga0501033_0016365
271 Ga0501034_0003558
272 Ga0501036_0014402
273 Ga0501037_0003166
274 Ga0501038_0022296
275 Ga0501039_0010280
276 Ga0501040_0016105
277 Ga0501041_0003395
278 Ga0501043_0004495
279 Ga0501047_0002219
280 Ga0501047_0008216
281 Ga0501048_0004798
282 Ga0501067_0007574
283 Ga0501069_0021297
284 Ga0501070_0017394
285 Ga0501072_0017662
286 Ga0501073_0028626
287 Ga0501074_0009863
288 Ga0501076_0010269
289 Ga0501077_0012837
290 Ga0501079_0004106
291 Ga0501083_0002699
292 Ga0501035_0005975
293 Ga0501035_0006688
294 Ga0501044_0001425
295 Ga0501044_0052470
296 nmdc:mga08y16_6515_c1
297 Ga0500641_0014519
298 Ga0500573_0034602
299 Ga0500616_0002803
300 Ga0501082_0005118
301 2891567479
302 2501943807
303 2585307365
304 2587739505
305 2644264903
306 2644422229
307 2644442470
308 2644505355
309 2644626629
310 2676483065
311 2676492589
312 2753073680
313 2772646128
314 2785372193
315 2786673272
316 2808844645
317 2808914209
318 2812355308
319 2812363968
320 2831935735
321 2832008988
322 2852638795
323 2855670737
324 2855677834
325 2855683753
326 2856742531
327 2856863603
328 2857289667
329 2858849366
330 2858882477
331 2858894652
332 2858895584
333 2862284028
334 2862583897
335 2866066702
336 2867429263
337 2867511461
338 2868093427
339 2869051147
340 2869066791
341 2869069636
342 2870723995
343 2877678447
344 2880490874
345 2880501637
346 2884698062
347 2884996901
348 2887481534
349 2891402171
350 2891557314
351 2895430113
352 2895445122
353 2902584520
354 2929223754
355 2929230145
356 2946070584
357 2946078323
358 2947226257
359 2954383398
360 2954679573
361 2954684580
362 2954694109
363 2954709217
364 2954713714
365 2954723677
366 2954738156
367 2954742580
368 2954757014
369 2954761544
370 2978978795
371 3006326842
372 3006499585
373 649814633
374 8003872459
375 8047714536
376 8054705894
377 8054728873
378 8054734740

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07488

Glyco_hydro_67M

Glycosyl hydrolase family 67 middle domain

177

503

0.97

PF07477

Glyco_hydro_67C

Glycosyl hydrolase family 67 C-terminus

504

738

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
1k9d-assembly1.cif.gz_A the 1.7 a crystal structure of alpha-d-glucuronidase, a family-67 glycoside hydrolase from bacillus stearothermophilus t-1 0.9299 13 658
1mqq-assembly1.cif.gz_A-2 the crystal structure of alpha-d-glucuronidase from bacillus stearothermophilus t-1 complexed with glucuronic acid 0.9293 11 658
1k9e-assembly1.cif.gz_A crystal structure of a mutated family-67 alpha-d-glucuronidase (e285n) from bacillus stearothermophilus t-6, complexed with 4-o-methyl-glucuronic acid 0.9256 12 658
1l8n-assembly1.cif.gz_A-2 the 1.5a crystal structure of alpha-d-glucuronidase from bacillus stearothermophilus t-1, complexed with 4-o-methyl-glucuronic acid and xylotriose 0.9238 12 658
1mqp-assembly1.cif.gz_A-2 the crystal structure of alpha-d-glucuronidase from bacillus stearothermophilus t-6 0.9222 11 658
ID Description Score Start End Superfamily
1l8nA03 Alpha Beta;Alpha-Beta Complex;Alpha-d-glucuronidase, C-terminal Domain;Alpha-glucuronidase, C-terminal domain 0.9523 460 658 3.90.1330.10
1mqqA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9441 129 451 3.20.20.80
1l8nA03 Alpha Beta;Alpha-Beta Complex;Alpha-d-glucuronidase, C-terminal Domain;Alpha-glucuronidase, C-terminal domain 0.9165 460 658 3.90.1330.10
1mqqA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9136 129 451 3.20.20.80
1gqkA03 Alpha Beta;Alpha-Beta Complex;Alpha-d-glucuronidase, C-terminal Domain;Alpha-glucuronidase, C-terminal domain 0.8937 460 657 3.90.1330.10
ID Description Score Start End GO Terms
AF-A0A0H1RN83-F1-model_v4 deleted 1.002 585 658
AF-A0A537JTH5-F1-model_v4 Alpha-glucuronidase 0.998 214 287 GO:0005576
GO:0033939
GO:0045493
GO:0046559
AF-A0A4R2BLF3-F1-model_v4 Glycosyl hydrolase family 67 0.9969 569 658 GO:0005576
GO:0033939
GO:0045493
GO:0046559
AF-A0A353M357-F1-model_v4 Alpha-glucuronidase 0.9945 576 658 GO:0005576
GO:0033939
GO:0045493
GO:0046559
AF-A0A357M785-F1-model_v4 Alpha-glucuronidase 0.9913 524 658 GO:0005576
GO:0033939
GO:0045493
GO:0046559

Map