F291738
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 189 | 176 | 378 | 1061 |
Family's Representative Sequence
| Representative Sequence | iso_pu_bacteria|2858902515|2858903126 |
| Length | 1267 |
| Sequence | RLVRRPVEAARGDRRSGGAARGDGRPEGATGRERRAGGPGGDDAQAGEGSGGDGTHADQPAGPLTYAEQPPAEEPPAEEPPAEEPPAGRAPAEEPPAGRGEGAEPAEVAEPAEESGRAEEPDQAGEPGRAGEAGRAGEAGRAERAGQGQRWRDDPVQAEVVAHTGGPMLVVGGPGTGKTSTLVEAVSARVAEGVDPERVLVLTFGRRQATDLRRRIEARVAGDGHRVLREPLVRTFPAYAYGLLRRAAAERGEPSPRLLTGPEQDLIIRELLDVVGEEPDDDPVGWPEDLRPALRTRAFAAQLRDLLMRAAERGVGPVELARLGERLGRADWPAAARFLREYVAVLALRDVSNRGSIAYDPAELVRAATGLLLDDPELLEAERRRLAHVYVDELADTDPAQLDLLAVVAGGGKSLVAFADPDSATYAFRGTDPAGVSAFPHRFRTVSGAPAAQVVLSTSYRAGAGLLAATRRLTGRLRGPAAHRRLHPQPAAPAGAVEVRTFRSATSEAAWLAQALRAAHLLGGVPWSAMAVLVRSTARQLPVLRRALHTAGVPTVVHGEDLPLHLQPAVAPLLLLLRCALEPERLDEEAAVALLHSPLGGADPLAERRLRQGLRALALAGGDRRPSGELIVDALRDPEELAAIDRRWAEPAQAVAGLLAIAREAAERPGATAEDVLWAAWDASGLAERWAGAITRGQAATGEHETARRWRAEAADRDLDAVLVLFDAAARFADRLPGARTEVFLDHVLGQDLPADTLAATADRGEAVRLLTAHAAKGLEWDLVAVAGVQEGVWPDLRLRGSLLGSERLVDVLAGRDQGDGGRAVLIGQTSALLDEERRLFHVAVTRARRRLLVSAVASAAVGGDDHEEQPSRFLYELDPTESPGPDEGGPGPADPTADPTDDPTDGPAGGPGGSEAGGPGGGGEHRPVTLPVAGPPRALTLPALVAELRTAVADPAAPHHRRRAAAAELARLAAAGVPGAHPDDWWGLRGLSDDRPLVDEGQPVKVTPSAMESALRCSLRWLLERHGGSGPASAAQGVGNLVHAAAMLAEDASADRSALLEYVAARFDAIELAARWMVGPERERAEAMVDKLLRWLAGNPRRLLAIEHEFAVRLDDPHRPVELTGRVDRLEVDDAGRLVVVDLKTGKSTAVTEHEIGEHPQLGAYQAAVEAGAFPEFGDESGGAALVQLGTGAKDAREQSQPAAGQGPEAGWATALVRRTADTMAAATFAAVANSKCRVCPVRTSCPVSGQGRQVVEPQSGTEKVP |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 2 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 3 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 4 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 7 | 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Metagenome | Rhizosphere |
| 8 | 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 10 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 11 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005547 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 15 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 16 | 3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 18 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 19 | 3300005840 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 | Metagenome | Rhizosphere |
| 20 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 21 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 22 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300006058 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 | Metagenome | Rhizosphere |
| 24 | 3300006163 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG | Metagenome | Rhizosphere |
| 25 | 3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Metagenome | Rhizosphere |
| 26 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 27 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 28 | 3300006914 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 | Metagenome | Rhizosphere |
| 29 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 30 | 3300007076 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Metagenome | Rhizosphere |
| 31 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 32 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 33 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 34 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 35 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 36 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 37 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 38 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 39 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 40 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 41 | 3300025908 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 67 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 70 | 3300030522 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM | Metagenome | Unclassified |
| 71 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 72 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 73 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 74 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 75 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 76 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 77 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 78 | 3300035091 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 | Metagenome | Rhizosphere |
| 79 | 3300035207 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 | Metagenome | Rhizosphere |
| 80 | 3300035242 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 | Metagenome | Rhizosphere |
| 81 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 82 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 83 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 84 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 85 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 86 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 87 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 88 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 89 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 90 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 91 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 92 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 93 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 94 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 95 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 96 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 97 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 98 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 99 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 100 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 101 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 102 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 103 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 104 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 105 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 106 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 107 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 108 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 109 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 110 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 111 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 112 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 113 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 114 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 115 | 3300049593 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 | Metagenome | Rhizosphere |
| 116 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 117 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 118 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 119 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 120 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 121 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 122 | 3300050514 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation | Metagenome | Rhizosphere |
| 123 | 3300053090 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere | Metagenome | Endosphere |
| 124 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 125 | 2858902515 | Micromonospora sp. MW-13 | Isolate | Rhizosphere |
| 126 | 2501939600 | Micromonospora sp. L5 | Isolate | Unclassified |
| 127 | 2515154088 | Salinispora arenicola CNT800 | Isolate | Rhizosphere |
| 128 | 2515154129 | Salinispora pacifica CNS103 | Isolate | Rhizosphere |
| 129 | 2515154137 | Salinispora arenicola CNX482 | Isolate | Rhizosphere |
| 130 | 2515154155 | Actinopolymorpha alba DSM 45243 | Isolate | Rhizosphere |
| 131 | 2515154202 | Salinispora pacifica CNT084 | Isolate | Rhizosphere |
| 132 | 2515154203 | Salinispora arenicola CNR921 | Isolate | Rhizosphere |
| 133 | 2643221679 | Angustibacter sp. Root456 | Isolate | Unclassified |
| 134 | 2675903058 | Actinopolymorpha cephalotaxi CPCC 202808 | Isolate | Rhizosphere |
| 135 | 2675903059 | Asanoa hainanensis CGMCC 4.5593 | Isolate | Rhizosphere |
| 136 | 2675903060 | Nonomuraea wenchangensis CGMCC 4.5598 | Isolate | Rhizosphere |
| 137 | 2751185782 | Actinoplanes subtropicus NRRL B-24665 | Isolate | Rhizosphere |
| 138 | 2772190715 | Micromonospora chokoriensis NRRL B-24750 | Isolate | Unclassified |
| 139 | 2791354901 | Actinophytocola xanthii 11-183 | Isolate | Rhizosphere |
| 140 | 2808606365 | Phycicoccus sp. SLBN-51 | Isolate | Unclassified |
| 141 | 2827628540 | Actinopolymorpha cephalotaxi DSM 45117 | Isolate | Rhizosphere |
| 142 | 2831935698 | Jishengella sp. AZ1-13 | Isolate | Unclassified |
| 143 | 2832004796 | Micromonospora endophytica JCM 18317 | Isolate | Unclassified |
| 144 | 2855683550 | Micromonospora sp. RP3T | Isolate | Unclassified |
| 145 | 2856858025 | Micromonospora aurantiaca 110B(2018) | Isolate | Unclassified |
| 146 | 2857288857 | Micromonospora noduli ONO23 | Isolate | Unclassified |
| 147 | 2858848962 | Micromonospora saelicesensis GAR06 | Isolate | Unclassified |
| 148 | 2858882152 | Micromonospora noduli MED15 | Isolate | Nodule |
| 149 | 2858888857 | Micromonospora saelicesensis Lupac 06 | Isolate | Unclassified |
| 150 | 2858895516 | Micromonospora saelicesensis PSN13 | Isolate | Unclassified |
| 151 | 2863067949 | Saccharopolyspora phatthalungensis DSM 45584 (Annotation) (version 2) | Isolate | Rhizosphere |
| 152 | 2866065130 | Micromonospora endophytica DSM 45430 | Isolate | Unclassified |
| 153 | 2866552031 | Saccharopolyspora rhizosphaerae H219 | Isolate | Unclassified |
| 154 | 2867302475 | Micromonospora globbae WPS1-2 | Isolate | Unclassified |
| 155 | 2867312974 | Micromonospora musae NGC1-4 | Isolate | Unclassified |
| 156 | 2867319477 | Micromonospora musae MS1-9 | Isolate | Unclassified |
| 157 | 2867507094 | Micromonospora zingiberis PLAI 1-1 | Isolate | Unclassified |
| 158 | 2880489317 | Micromonospora ureilytica DSM 101692 | Isolate | Unclassified |
| 159 | 2880495981 | Micromonospora vinacea DSM 101695 | Isolate | Unclassified |
| 160 | 2884693830 | Nonomuraea phyllanthi WYY166 | Isolate | Unclassified |
| 161 | 2887478801 | Catellatospora paridis NEAU-CL2 | Isolate | Rhizosphere |
| 162 | 2891554331 | Microbispora sp. CL1-1 | Isolate | Unclassified |
| 163 | 2895427314 | Nonomuraea sp. PA05 | Isolate | Unclassified |
| 164 | 2895442618 | Nonomuraea phyllanthi PA1-10 | Isolate | Unclassified |
| 165 | 2902582711 | Micromonospora sp. AP08 | Isolate | Unclassified |
| 166 | 2919446982 | Phycicoccus sp. 3266 | Isolate | Rhizosphere |
| 167 | 2929219909 | Micromonospora sp. R-75348 Hybrid assembly | Isolate | Unclassified |
| 168 | 2996221748 | Micromonospora veneta CAP181 | Isolate | Unclassified |
| 169 | 3001889506 | Janibacter sp. YIM B02568 | Isolate | Unclassified |
| 170 | 649633069 | Micromonospora sp. L5 | Isolate | Unclassified |
| 171 | 8001781756 | Catellatospora tritici NEAU-YM18 | Isolate | Rhizosphere |
| 172 | 8054704163 | Micromonospora trifolii NIE79 | Isolate | Nodule |
| 173 | 8054727385 | Micromonospora alfalfae MED01 | Isolate | Nodule |
| 174 | 8054734606 | Micromonospora hortensis NIE111 | Isolate | Nodule |
| 175 | 8056060235 | Nocardiopsis endophytica RSe5-2 | Isolate | Unclassified |
| 176 | 8056207758 | Saccharopolyspora indica KCTC 29208 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 72.49 |
| Metatranscriptomes | 0 |
| Isolates | 27.51 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 1.06 |
| Nodule | 2.12 |
| Rhizoplane | 5.82 |
| Rhizosphere | 65.61 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0070670_100004007 | 3300005331 | Bacteria | 12291 |
| 2 | Ga0068869_100000969 | 3300005334 | Bacteria | 16688 |
| 3 | Ga0070668_100000772 | 3300005347 | Bacteria | 22052 |
| 4 | Ga0070671_100001223 | 3300005355 | Bacteria | 19238 |
| 5 | Ga0070671_100021717 | 3300005355 | Bacteria | 5243 |
| 6 | Ga0070714_100008578 | 3300005435 | Bacteria | 7994 |
| 7 | Ga0070713_100004803 | 3300005436 | Bacteria | 9153 |
| 8 | Ga0070710_10002011 | 3300005437 | Bacteria | 9621 |
| 9 | Ga0070711_100005795 | 3300005439 | Bacteria | 7417 |
| 10 | Ga0070681_10007623 | 3300005458 | Bacteria | 10580 |
| 11 | Ga0070698_100006400 | 3300005471 | Bacteria | 12781 |
| 12 | Ga0070699_100001099 | 3300005518 | Bacteria | 25182 |
| 13 | Ga0070693_100004019 | 3300005547 | Bacteria | 6915 |
| 14 | Ga0070665_100013864 | 3300005548 | Bacteria | 8107 |
| 15 | Ga0068857_100034927 | 3300005577 | Bacteria | 4449 |
| 16 | Ga0068854_100006803 | 3300005578 | Bacteria | 7288 |
| 17 | Ga0070702_100000604 | 3300005615 | Bacteria | 13188 |
| 18 | Ga0068859_100013206 | 3300005617 | Bacteria | 8291 |
| 19 | Ga0068859_100028642 | 3300005617 | Bacteria | 5585 |
| 20 | Ga0068864_100019823 | 3300005618 | Bacteria | 5623 |
| 21 | Ga0068870_10000494 | 3300005840 | Bacteria | 14926 |
| 22 | Ga0068863_100004648 | 3300005841 | Bacteria | 13532 |
| 23 | Ga0081539_10000132 | 3300005985 | Bacteria | 175454 |
| 24 | Ga0081539_10000938 | 3300005985 | Bacteria | 54684 |
| 25 | Ga0081539_10001138 | 3300005985 | Bacteria | 48256 |
| 26 | Ga0081539_10007280 | 3300005985 | Bacteria | 10157 |
| 27 | Ga0070717_10009648 | 3300006028 | Bacteria | 7265 |
| 28 | Ga0075432_10001902 | 3300006058 | Bacteria | 6920 |
| 29 | Ga0070715_10007508 | 3300006163 | Bacteria | 3757 |
| 30 | Ga0070716_100002565 | 3300006173 | Bacteria | 8404 |
| 31 | Ga0070712_100008373 | 3300006175 | Bacteria | 6503 |
| 32 | Ga0075430_100002190 | 3300006846 | Bacteria | 16179 |
| 33 | Ga0075436_100011671 | 3300006914 | Bacteria | 6028 |
| 34 | Ga0097620_100013206 | 3300006931 | Bacteria | 8291 |
| 35 | Ga0097620_100028642 | 3300006931 | Bacteria | 5585 |
| 36 | Ga0075435_100001727 | 3300007076 | Bacteria | 14199 |
| 37 | Ga0111539_10008294 | 3300009094 | Bacteria | 13226 |
| 38 | Ga0114129_10000525 | 3300009147 | Bacteria | 46845 |
| 39 | Ga0114129_10031646 | 3300009147 | Bacteria | 7478 |
| 40 | Ga0105243_10017342 | 3300009148 | Bacteria | 5443 |
| 41 | Ga0105241_10002679 | 3300009174 | Bacteria | 13347 |
| 42 | Ga0105246_10000743 | 3300011119 | Bacteria | 18528 |
| 43 | Ga0157372_10020892 | 3300013307 | Bacteria | 7067 |
| 44 | Ga0157375_10031530 | 3300013308 | Bacteria | 5012 |
| 45 | Ga0163163_10011380 | 3300014325 | Bacteria | 8065 |
| 46 | Ga0157379_10002772 | 3300014968 | Bacteria | 14767 |
| 47 | Ga0213875_10004037 | 3300021388 | Bacteria | 8170 |
| 48 | Ga0213875_10013906 | 3300021388 | Bacteria | 3937 |
| 49 | Ga0207643_10000443 | 3300025908 | Bacteria | 27022 |
| 50 | Ga0207684_10012656 | 3300025910 | Bacteria | 7327 |
| 51 | Ga0207693_10000311 | 3300025915 | Bacteria | 45316 |
| 52 | Ga0207663_10003628 | 3300025916 | Bacteria | 7575 |
| 53 | Ga0207649_10002268 | 3300025920 | Bacteria | 10819 |
| 54 | Ga0207652_10013255 | 3300025921 | Bacteria | 6678 |
| 55 | Ga0207650_10001732 | 3300025925 | Bacteria | 15512 |
| 56 | Ga0207687_10006085 | 3300025927 | Bacteria | 7988 |
| 57 | Ga0207700_10002549 | 3300025928 | Bacteria | 10459 |
| 58 | Ga0207664_10004958 | 3300025929 | Bacteria | 9055 |
| 59 | Ga0207644_10003961 | 3300025931 | Bacteria | 9613 |
| 60 | Ga0207690_10008178 | 3300025932 | Bacteria | 6205 |
| 61 | Ga0207665_10000506 | 3300025939 | Bacteria | 26419 |
| 62 | Ga0207689_10001802 | 3300025942 | Bacteria | 20226 |
| 63 | Ga0207679_10001328 | 3300025945 | Bacteria | 15634 |
| 64 | Ga0207668_10001417 | 3300025972 | Bacteria | 14105 |
| 65 | Ga0207677_10002172 | 3300026023 | Bacteria | 10306 |
| 66 | Ga0207678_10003145 | 3300026067 | Bacteria | 14934 |
| 67 | Ga0207702_10001472 | 3300026078 | Bacteria | 23350 |
| 68 | Ga0207641_10001871 | 3300026088 | Bacteria | 20210 |
| 69 | Ga0207641_10004452 | 3300026088 | Bacteria | 12135 |
| 70 | Ga0207648_10048541 | 3300026089 | Bacteria | 3716 |
| 71 | Ga0207676_10001142 | 3300026095 | Bacteria | 20012 |
| 72 | Ga0207674_10076310 | 3300026116 | Bacteria | 3359 |
| 73 | Ga0207683_10004887 | 3300026121 | Bacteria | 11538 |
| 74 | Ga0207698_10004082 | 3300026142 | Bacteria | 8864 |
| 75 | Ga0207428_10001258 | 3300027907 | Bacteria | 27141 |
| 76 | Ga0268266_10021257 | 3300028379 | Bacteria | 5528 |
| 77 | Ga0268264_10009910 | 3300028381 | Bacteria | 7887 |
| 78 | Ga0307515_10000065 | 3300028794 | Bacteria | 244497 |
| 79 | Ga0307515_10025555 | 3300028794 | Bacteria | 10210 |
| 80 | Ga0307512_10004293 | 3300030522 | Bacteria | 15725 |
| 81 | Ga0307512_10006989 | 3300030522 | Bacteria | 11266 |
| 82 | Ga0307512_10007541 | 3300030522 | Bacteria | 10765 |
| 83 | Ga0307513_10012765 | 3300031456 | Bacteria | 10348 |
| 84 | Ga0307516_10042640 | 3300031730 | Bacteria | 4500 |
| 85 | Ga0307405_10003479 | 3300031731 | Bacteria | 7237 |
| 86 | Ga0307410_10001292 | 3300031852 | Bacteria | 11157 |
| 87 | Ga0307409_100000088 | 3300031995 | Bacteria | 32733 |
| 88 | Ga0307416_100005707 | 3300032002 | Bacteria | 7697 |
| 89 | Ga0307415_100000033 | 3300032126 | Bacteria | 59342 |
| 90 | Ga0373951_0000179 | 3300035091 | Bacteria | 22781 |
| 91 | Ga0373942_0000033 | 3300035207 | Bacteria | 26057 |
| 92 | Ga0373962_0000656 | 3300035242 | Bacteria | 7882 |
| 93 | Ga0436364_0331925 | 3300037853 | Bacteria | 12146 |
| 94 | Ga0436365_0918029 | 3300039437 | Bacteria | 8300 |
| 95 | Ga0466965_0002318 | 3300044683 | Bacteria | 8043 |
| 96 | Ga0466960_0000234 | 3300044901 | Bacteria | 19300 |
| 97 | Ga0466967_0015694 | 3300045976 | Bacteria | 5948 |
| 98 | Ga0496102_0000015 | 3300048905 | Bacteria | 304524 |
| 99 | Ga0496103_0000020 | 3300048906 | Bacteria | 234050 |
| 100 | Ga0496104_0008632 | 3300048907 | Bacteria | 9065 |
| 101 | Ga0496104_0022149 | 3300048907 | Bacteria | 5838 |
| 102 | Ga0496105_0007068 | 3300048908 | Bacteria | 8653 |
| 103 | Ga0496106_0001577 | 3300048909 | Bacteria | 17141 |
| 104 | Ga0496108_0000010 | 3300048911 | Bacteria | 273269 |
| 105 | Ga0496109_0003843 | 3300048912 | Bacteria | 12544 |
| 106 | Ga0496110_0007063 | 3300048913 | Bacteria | 8935 |
| 107 | Ga0496111_0001371 | 3300048914 | Bacteria | 13808 |
| 108 | Ga0496113_0000658 | 3300048916 | Bacteria | 17466 |
| 109 | Ga0496117_0000047 | 3300048920 | Bacteria | 299632 |
| 110 | Ga0496118_0000050 | 3300048921 | Bacteria | 244124 |
| 111 | Ga0496119_0001261 | 3300048922 | Bacteria | 31464 |
| 112 | Ga0496120_0010001 | 3300048923 | Bacteria | 6664 |
| 113 | Ga0496121_0005595 | 3300048924 | Bacteria | 16038 |
| 114 | Ga0496125_0033913 | 3300048928 | Bacteria | 4508 |
| 115 | Ga0496126_0000049 | 3300048929 | Bacteria | 317568 |
| 116 | Ga0501032_0006236 | 3300049569 | Bacteria | 8776 |
| 117 | Ga0501033_0012890 | 3300049570 | Bacteria | 6377 |
| 118 | Ga0501036_0009576 | 3300049572 | Bacteria | 7969 |
| 119 | Ga0501037_0011467 | 3300049573 | Bacteria | 6526 |
| 120 | Ga0501039_0009502 | 3300049575 | Bacteria | 7413 |
| 121 | Ga0501042_0000472 | 3300049578 | Bacteria | 20838 |
| 122 | Ga0501043_0006409 | 3300049579 | Bacteria | 9455 |
| 123 | Ga0501071_0003813 | 3300049587 | Bacteria | 9479 |
| 124 | Ga0501072_0008145 | 3300049588 | Bacteria | 7954 |
| 125 | Ga0501074_0010624 | 3300049590 | Bacteria | 6684 |
| 126 | Ga0501075_0006752 | 3300049591 | Bacteria | 7919 |
| 127 | Ga0501076_0000943 | 3300049592 | Bacteria | 18981 |
| 128 | Ga0501077_0006166 | 3300049593 | Bacteria | 7322 |
| 129 | Ga0501079_0002489 | 3300049741 | Bacteria | 13380 |
| 130 | Ga0501045_0002946 | 3300049824 | Bacteria | 11644 |
| 131 | nmdc:mga05p37_7494_c1 | 3300050507 | Bacteria | 12864 |
| 132 | nmdc:mga0qj67_696_c1 | 3300050509 | Bacteria | 22898 |
| 133 | nmdc:mga08y16_11185_c1 | 3300050511 | Bacteria | 9427 |
| 134 | nmdc:mga0n895_3626_c1 | 3300050512 | Bacteria | 12479 |
| 135 | nmdc:mga08x19_30375_c1 | 3300050514 | Bacteria | 3394 |
| 136 | Ga0500646_0001780 | 3300053090 | Bacteria | 5672 |
| 137 | Ga0500616_0001643 | 3300053153 | Bacteria | 20695 |
| 138 | 2858903126 | 2858902515 | Bacteria | 7086037 |
| 139 | 2501940408 | 2501939600 | Bacteria | 6907073 |
| 140 | 2515496356 | 2515154088 | Bacteria | 5526283 |
| 141 | 2515718474 | 2515154129 | Bacteria | 5584369 |
| 142 | 2515756485 | 2515154137 | Bacteria | 5711575 |
| 143 | 2515854431 | 2515154155 | Bacteria | 7985436 |
| 144 | 2516082857 | 2515154202 | Bacteria | 5471270 |
| 145 | 2516089289 | 2515154203 | Bacteria | 5458536 |
| 146 | 2644444307 | 2643221679 | Bacteria | 3839507 |
| 147 | 2676477866 | 2675903058 | Bacteria | 6822861 |
| 148 | 2676481316 | 2675903059 | Bacteria | 8644972 |
| 149 | 2676493114 | 2675903060 | Bacteria | 10051191 |
| 150 | 2753271484 | 2751185782 | Bacteria | 11227053 |
| 151 | 2772645817 | 2772190715 | Bacteria | 6959372 |
| 152 | 2791913054 | 2791354901 | Bacteria | 8322202 |
| 153 | 2808873163 | 2808606365 | Bacteria | 4301966 |
| 154 | 2827629190 | 2827628540 | Bacteria | 6858585 |
| 155 | 2831939300 | 2831935698 | Bacteria | 5963223 |
| 156 | 2832007112 | 2832004796 | Bacteria | 6538017 |
| 157 | 2855688067 | 2855683550 | Bacteria | 7134265 |
| 158 | 2856858670 | 2856858025 | Bacteria | 7255264 |
| 159 | 2857289222 | 2857288857 | Bacteria | 7189066 |
| 160 | 2858854746 | 2858848962 | Bacteria | 6963058 |
| 161 | 2858887297 | 2858882152 | Bacteria | 7230291 |
| 162 | 2858892992 | 2858888857 | Bacteria | 7060307 |
| 163 | 2858902160 | 2858895516 | Bacteria | 7378898 |
| 164 | 2863068874 | 2863067949 | Bacteria | 8541735 |
| 165 | 2866069206 | 2866065130 | Bacteria | 6518152 |
| 166 | 2866553104 | 2866552031 | Bacteria | 5824618 |
| 167 | 2867305409 | 2867302475 | Bacteria | 7087181 |
| 168 | 2867316639 | 2867312974 | Bacteria | 7058875 |
| 169 | 2867321832 | 2867319477 | Bacteria | 7069771 |
| 170 | 2867512178 | 2867507094 | Bacteria | 6506033 |
| 171 | 2880495469 | 2880489317 | Bacteria | 7096270 |
| 172 | 2880496887 | 2880495981 | Bacteria | 7340502 |
| 173 | 2884702829 | 2884693830 | Bacteria | 11273186 |
| 174 | 2887484746 | 2887478801 | Bacteria | 8972725 |
| 175 | 2891558894 | 2891554331 | Bacteria | 8812224 |
| 176 | 2895433917 | 2895427314 | Bacteria | 13147766 |
| 177 | 2895449245 | 2895442618 | Bacteria | 11027144 |
| 178 | 2902583796 | 2902582711 | Bacteria | 6187705 |
| 179 | 2919449472 | 2919446982 | Bacteria | 3994487 |
| 180 | 2929225506 | 2929219909 | Bacteria | 6984360 |
| 181 | 2996223917 | 2996221748 | Bacteria | 6799777 |
| 182 | 3001890739 | 3001889506 | Bacteria | 2975194 |
| 183 | 649813148 | 649633069 | Bacteria | 6962533 |
| 184 | 8001782301 | 8001781756 | Bacteria | 9586736 |
| 185 | 8054704427 | 8054704163 | Bacteria | 7247792 |
| 186 | 8054734468 | 8054727385 | Bacteria | 7558670 |
| 187 | 8054738876 | 8054734606 | Bacteria | 6947278 |
| 188 | 8056061306 | 8056060235 | Bacteria | 7259403 |
| 189 | 8056215413 | 8056207758 | Bacteria | 8639239 |
| 190 | Ga0070670_100004007 | |||
| 191 | Ga0068869_100000969 | |||
| 192 | Ga0070668_100000772 | |||
| 193 | Ga0070671_100001223 | |||
| 194 | Ga0070671_100021717 | |||
| 195 | Ga0070714_100008578 | |||
| 196 | Ga0070713_100004803 | |||
| 197 | Ga0070710_10002011 | |||
| 198 | Ga0070711_100005795 | |||
| 199 | Ga0070681_10007623 | |||
| 200 | Ga0070698_100006400 | |||
| 201 | Ga0070699_100001099 | |||
| 202 | Ga0070693_100004019 | |||
| 203 | Ga0070665_100013864 | |||
| 204 | Ga0068857_100034927 | |||
| 205 | Ga0068854_100006803 | |||
| 206 | Ga0070702_100000604 | |||
| 207 | Ga0068859_100013206 | |||
| 208 | Ga0068859_100028642 | |||
| 209 | Ga0068864_100019823 | |||
| 210 | Ga0068870_10000494 | |||
| 211 | Ga0068863_100004648 | |||
| 212 | Ga0081539_10000132 | |||
| 213 | Ga0081539_10000938 | |||
| 214 | Ga0081539_10001138 | |||
| 215 | Ga0081539_10007280 | |||
| 216 | Ga0070717_10009648 | |||
| 217 | Ga0075432_10001902 | |||
| 218 | Ga0070715_10007508 | |||
| 219 | Ga0070716_100002565 | |||
| 220 | Ga0070712_100008373 | |||
| 221 | Ga0075430_100002190 | |||
| 222 | Ga0075436_100011671 | |||
| 223 | Ga0097620_100013206 | |||
| 224 | Ga0097620_100028642 | |||
| 225 | Ga0075435_100001727 | |||
| 226 | Ga0111539_10008294 | |||
| 227 | Ga0114129_10000525 | |||
| 228 | Ga0114129_10031646 | |||
| 229 | Ga0105243_10017342 | |||
| 230 | Ga0105241_10002679 | |||
| 231 | Ga0105246_10000743 | |||
| 232 | Ga0157372_10020892 | |||
| 233 | Ga0157375_10031530 | |||
| 234 | Ga0163163_10011380 | |||
| 235 | Ga0157379_10002772 | |||
| 236 | Ga0213875_10004037 | |||
| 237 | Ga0213875_10013906 | |||
| 238 | Ga0207643_10000443 | |||
| 239 | Ga0207684_10012656 | |||
| 240 | Ga0207693_10000311 | |||
| 241 | Ga0207663_10003628 | |||
| 242 | Ga0207649_10002268 | |||
| 243 | Ga0207652_10013255 | |||
| 244 | Ga0207650_10001732 | |||
| 245 | Ga0207687_10006085 | |||
| 246 | Ga0207700_10002549 | |||
| 247 | Ga0207664_10004958 | |||
| 248 | Ga0207644_10003961 | |||
| 249 | Ga0207690_10008178 | |||
| 250 | Ga0207665_10000506 | |||
| 251 | Ga0207689_10001802 | |||
| 252 | Ga0207679_10001328 | |||
| 253 | Ga0207668_10001417 | |||
| 254 | Ga0207677_10002172 | |||
| 255 | Ga0207678_10003145 | |||
| 256 | Ga0207702_10001472 | |||
| 257 | Ga0207641_10001871 | |||
| 258 | Ga0207641_10004452 | |||
| 259 | Ga0207648_10048541 | |||
| 260 | Ga0207676_10001142 | |||
| 261 | Ga0207674_10076310 | |||
| 262 | Ga0207683_10004887 | |||
| 263 | Ga0207698_10004082 | |||
| 264 | Ga0207428_10001258 | |||
| 265 | Ga0268266_10021257 | |||
| 266 | Ga0268264_10009910 | |||
| 267 | Ga0307515_10000065 | |||
| 268 | Ga0307515_10025555 | |||
| 269 | Ga0307512_10004293 | |||
| 270 | Ga0307512_10006989 | |||
| 271 | Ga0307512_10007541 | |||
| 272 | Ga0307513_10012765 | |||
| 273 | Ga0307516_10042640 | |||
| 274 | Ga0307405_10003479 | |||
| 275 | Ga0307410_10001292 | |||
| 276 | Ga0307409_100000088 | |||
| 277 | Ga0307416_100005707 | |||
| 278 | Ga0307415_100000033 | |||
| 279 | Ga0373951_0000179 | |||
| 280 | Ga0373942_0000033 | |||
| 281 | Ga0373962_0000656 | |||
| 282 | Ga0436364_0331925 | |||
| 283 | Ga0436365_0918029 | |||
| 284 | Ga0466965_0002318 | |||
| 285 | Ga0466960_0000234 | |||
| 286 | Ga0466967_0015694 | |||
| 287 | Ga0496102_0000015 | |||
| 288 | Ga0496103_0000020 | |||
| 289 | Ga0496104_0008632 | |||
| 290 | Ga0496104_0022149 | |||
| 291 | Ga0496105_0007068 | |||
| 292 | Ga0496106_0001577 | |||
| 293 | Ga0496108_0000010 | |||
| 294 | Ga0496109_0003843 | |||
| 295 | Ga0496110_0007063 | |||
| 296 | Ga0496111_0001371 | |||
| 297 | Ga0496113_0000658 | |||
| 298 | Ga0496117_0000047 | |||
| 299 | Ga0496118_0000050 | |||
| 300 | Ga0496119_0001261 | |||
| 301 | Ga0496120_0010001 | |||
| 302 | Ga0496121_0005595 | |||
| 303 | Ga0496125_0033913 | |||
| 304 | Ga0496126_0000049 | |||
| 305 | Ga0501032_0006236 | |||
| 306 | Ga0501033_0012890 | |||
| 307 | Ga0501036_0009576 | |||
| 308 | Ga0501037_0011467 | |||
| 309 | Ga0501039_0009502 | |||
| 310 | Ga0501042_0000472 | |||
| 311 | Ga0501043_0006409 | |||
| 312 | Ga0501071_0003813 | |||
| 313 | Ga0501072_0008145 | |||
| 314 | Ga0501074_0010624 | |||
| 315 | Ga0501075_0006752 | |||
| 316 | Ga0501076_0000943 | |||
| 317 | Ga0501077_0006166 | |||
| 318 | Ga0501079_0002489 | |||
| 319 | Ga0501045_0002946 | |||
| 320 | nmdc:mga05p37_7494_c1 | |||
| 321 | nmdc:mga0qj67_696_c1 | |||
| 322 | nmdc:mga08y16_11185_c1 | |||
| 323 | nmdc:mga0n895_3626_c1 | |||
| 324 | nmdc:mga08x19_30375_c1 | |||
| 325 | Ga0500646_0001780 | |||
| 326 | Ga0500616_0001643 | |||
| 327 | 2858903126 | |||
| 328 | 2501940408 | |||
| 329 | 2515496356 | |||
| 330 | 2515718474 | |||
| 331 | 2515756485 | |||
| 332 | 2515854431 | |||
| 333 | 2516082857 | |||
| 334 | 2516089289 | |||
| 335 | 2644444307 | |||
| 336 | 2676477866 | |||
| 337 | 2676481316 | |||
| 338 | 2676493114 | |||
| 339 | 2753271484 | |||
| 340 | 2772645817 | |||
| 341 | 2791913054 | |||
| 342 | 2808873163 | |||
| 343 | 2827629190 | |||
| 344 | 2831939300 | |||
| 345 | 2832007112 | |||
| 346 | 2855688067 | |||
| 347 | 2856858670 | |||
| 348 | 2857289222 | |||
| 349 | 2858854746 | |||
| 350 | 2858887297 | |||
| 351 | 2858892992 | |||
| 352 | 2858902160 | |||
| 353 | 2863068874 | |||
| 354 | 2866069206 | |||
| 355 | 2866553104 | |||
| 356 | 2867305409 | |||
| 357 | 2867316639 | |||
| 358 | 2867321832 | |||
| 359 | 2867512178 | |||
| 360 | 2880495469 | |||
| 361 | 2880496887 | |||
| 362 | 2884702829 | |||
| 363 | 2887484746 | |||
| 364 | 2891558894 | |||
| 365 | 2895433917 | |||
| 366 | 2895449245 | |||
| 367 | 2902583796 | |||
| 368 | 2919449472 | |||
| 369 | 2929225506 | |||
| 370 | 2996223917 | |||
| 371 | 3001890739 | |||
| 372 | 649813148 | |||
| 373 | 8001782301 | |||
| 374 | 8054704427 | |||
| 375 | 8054734468 | |||
| 376 | 8054738876 | |||
| 377 | 8056061306 | |||
| 378 | 8056215413 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1qhh-assembly1.cif.gz_B | structure of dna helicase with adpnp | 0.7905 | 158 | 431 |
| 1qhh-assembly1.cif.gz_A | structure of dna helicase with adpnp | 0.7858 | 1 | 99 |
| 6vsx-assembly1.cif.gz_A | x-ray crystal structure of the c-terminal domain of bacillus subtilis rna polymerase binding helicase held | 0.7786 | 600 | 704 |
| 3dmn-assembly1.cif.gz_A | the crystal structure of the c-terminal domain of a possilbe dna helicase from lactobacillus plantarun wcfs1 | 0.7758 | 593 | 703 |
| 1qhh-assembly1.cif.gz_B | structure of dna helicase with adpnp | 0.7359 | 158 | 431 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 2is1A01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.8787 | 11 | 264 | 3.40.50.300 |
| 1uaaB01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.8592 | 1 | 263 | 3.40.50.300 |
| 2is1B03 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.8235 | 278 | 701 | 3.40.50.300 |
| 2pjrA01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.798 | 2 | 263 | 3.40.50.300 |
| 4c2tA03 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.7955 | 278 | 703 | 3.40.50.300 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A399NZA1-F1-model_v4 | ATP-dependent helicase | 0.9116 | 11 | 276 |
GO:0005524
GO:0009378 GO:0016787 GO:0036121 GO:0061749 GO:1990518 |
| AF-A0A3C1P3T5-F1-model_v4 | DNA helicase UvrD | 0.9079 | 11 | 251 |
GO:0000725
GO:0003677 GO:0005524 GO:0005829 GO:0009378 GO:0016787 GO:0033202 GO:0036121 GO:0061749 GO:1990518 |
| AF-A0A7K0N819-F1-model_v4 | AAA family ATPase | 0.9049 | 1 | 274 |
GO:0000725
GO:0003677 GO:0005524 GO:0005829 GO:0009378 GO:0016787 GO:0033202 GO:0036121 GO:0061749 GO:1990518 |
| AF-A0A3M1X6R2-F1-model_v4 | DNA 3'-5' helicase (EC 5.6.2.4) | 0.8997 | 11 | 372 |
GO:0000725
GO:0003677 GO:0005524 GO:0005829 GO:0009378 GO:0016787 GO:0016853 GO:0033202 GO:0036121 GO:0061749 GO:1990518 |
| AF-A0A7X6TY70-F1-model_v4 | DNA 3'-5' helicase (EC 5.6.2.4) | 0.8995 | 11 | 368 |
GO:0000725
GO:0003677 GO:0005524 GO:0005829 GO:0016787 GO:0016853 GO:0033202 GO:0043138 |