F291628

General Info

Members Datasets Scaffolds Average Seq Length
189 137 111 512

Family's Representative Sequence

Representative Sequence 3300050507|nmdc:mga05p37_20201_c1|nmdc:mga05p37_20201_c1_2842_4452
Length 536
Sequence MDAYNYIITYLKTIHHYMASENKINQLFDKREQAKLGGGTKRIEAQHKKGKLTARERIDLLLDENSFEEFDMFVSHRCTDFGIGNEKYMSDGVITGYGTIDGRLVYVFSQDFTVFGGSLGEMYAKKICKVMDQAMKMGAPVIGINDSGGARIQEGVQSLAGYAEIFERNILASGVIPQLSAIFGPCAGGAVYSPALTDFIVMSKTNSYMFVTGPKVVQTVTGENVTDEQLGGGLIHGTKSGVAHFVAEDEQEGILLLRKLLSYLPQNNMEEAPLVPCTDSIDRLEDSLNDIIPDNPNKPYDVKDIIYAIADNREFMEVARDFAPNMITGYARFDGRSVGIVANQPNYLAGVLDINASRKAARFVRFCDAFNIPILTLVDVPGFLPGTAQEYGGIILHGAKLLYAYGEATVPKVTIILRKAYGGAYDVMSSKHLRGDFNYAWPSAEIAVMGAKGAIEVLYNKKLAGIEDAAEREKAFRNYEEEYKTKFANPYDAASYGYIDDVISPRMTRFRIIRALQVLASKKDTNPPKKHGNIPL

Samples

Sample ID Description Type Environment
1 2510917027 Brevibacillus sp. CF112 Isolate Rhizosphere
2 2512564013 Brevibacillus sp. BC25 Isolate Rhizosphere
3 2585427633 Neorhizobium galegae bv. officinalis HAMBI 1141 Isolate Nodule
4 2585427634 Neorhizobium galegae bv. orientalis HAMBI 540 Isolate Nodule
5 2593339131 Bacillus sp. UNCCL81 Isolate Unclassified
6 2643221731 Bacillus sp. Root147 Isolate Unclassified
7 2643221732 Bacillus sp. Root239 Isolate Unclassified
8 2671180330 Peribacillus simplex SH-B26 Isolate Unclassified
9 2738541295 Bacillus sp. OK085 Isolate Unclassified
10 2738541299 Paenisporosarcina sp. OV554 Isolate Unclassified
11 2738543010 Bacillus sp. YR335 Isolate Unclassified
12 2738543017 Bacillus sp. OV186 Isolate Unclassified
13 2757320391 Bacillus sp. NFR08 Isolate Rhizoplane
14 2775507177 Bacillus sp. AFS055030 Isolate Unclassified
15 2775507192 Bacillus sp. AFS041924 Isolate Unclassified
16 2788500588 Lysinibacillus sp. YS11 Isolate Unclassified
17 2808606364 Bacillus sp. SLBN-3 Isolate Unclassified
18 2816332186 Peribacillus frigoritolerans 3612 Isolate Unclassified
19 2818991451 Lysinibacillus fusiformis 3193 Isolate Unclassified
20 2818991465 Priestia megaterium 3291 Isolate Rhizosphere
21 2842682962 Bacillus sp. R-72492 Isolate Unclassified
22 2842882022 Bacillus sp. R-71893 Isolate Unclassified
23 2849139964 Bacillus sp. R-71875 Isolate Unclassified
24 2852673933 Sporosarcina sp. JAI121 Isolate Rhizosphere
25 2857465823 Brevibacillus sp. R-74266 Isolate Unclassified
26 2857581216 Bacillus sp. R-71922 Isolate Unclassified
27 2857586860 Bacillus sp. R-71935 Isolate Unclassified
28 2857591370 Brevibacillus sp. R-71934 Isolate Unclassified
29 2857604169 Domibacillus sp. R-71921 Isolate Unclassified
30 2857609550 Domibacillus sp. R-71929 Isolate Unclassified
31 2881644220 Siminovitchia terrae LMG 29736 Isolate Rhizosphere
32 2898907183 Brevibacillus sp. SYP-B805 Isolate Rhizosphere
33 2904524088 Priestia megaterium 1428 Isolate Rhizosphere
34 2904606771 Lysinibacillus macroides 1284 Isolate Rhizosphere
35 2915597211 Brevibacillus brevis Ag35 Isolate Nodule
36 2915606848 Brevibacillus sp. HD1.4A Isolate Rhizosphere
37 2919143609 Priestia megaterium 1751 Isolate Rhizosphere
38 2919414237 Neobacillus niacini 3240 Isolate Rhizosphere
39 2919517244 Priestia aryabhattai 3820 Isolate Unclassified
40 2919720352 Priestia megaterium 4340 Isolate Unclassified
41 2928093941 Priestia aryabhattai 1389 Isolate Rhizosphere
42 2928510474 Sporosarcina psychrophila 1288 Isolate Rhizosphere
43 2929004312 Priestia megaterium 1104 Isolate Unclassified
44 2929183550 Brevibacillus sp. R-71971 Hybrid assembly Isolate Unclassified
45 2936340661 Gottfriedia acidiceleris 1-17 Isolate Rhizosphere
46 2936361878 Neobacillus endophyticus BRMEA1 Isolate Unclassified
47 2939593269 Lysinibacillus parviboronicapiens 736 Isolate Rhizosphere
48 2956897341 Ectobacillus funiculus W18-2 Isolate Rhizosphere
49 2960319331 Priestia megaterium AFS057444 Isolate Unclassified
50 2960375949 Priestia megaterium AFS067084 Isolate Unclassified
51 2964375228 Anaerobacillus alkaliphilus B16-10 Isolate Rhizosphere
52 2977254563 Bacillus sp. SORGH_AS 510 Isolate Unclassified
53 2990275345 Bacillus sp. SLBN-46 Isolate Unclassified
54 3001267043 Bacillus sp. FJAT-49870 Isolate Rhizosphere
55 3001272096 Lederbergia citrisecunda FJAT-49732 Isolate Rhizosphere
56 3001892409 Neobacillus rhizophilus FJAT-49825 Isolate Rhizosphere
57 3006826541 Bacillus haikouensis CrR16 Isolate Unclassified
58 3006973921 Bacillus sp. FJAT-49736 Isolate Rhizosphere
59 3006978542 Bacillus sp. FJAT-49705 Isolate Rhizosphere
60 3006984091 Lederbergia citrea FJAT-49754 Isolate Rhizosphere
61 3006988479 Bacillus sp. FJAT-49711 Isolate Rhizosphere
62 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
63 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
64 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
65 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
66 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
67 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
68 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
69 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
70 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
71 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
72 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
73 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
74 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
75 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
76 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
77 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
79 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
80 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
82 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
88 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
89 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
90 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
91 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
92 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
93 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
94 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
95 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
96 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
97 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
98 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
99 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
100 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
101 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
102 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
103 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
104 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
105 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
106 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
107 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
108 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
109 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
110 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
111 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
112 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
113 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
114 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
115 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
116 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
117 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
118 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
119 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
120 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
121 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
122 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
123 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
124 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
125 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
126 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
127 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
128 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
129 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
130 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
131 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
132 8005658619 Rhizobium terrae CC-HIH110 Isolate Unclassified
133 8022893055 Bacillus aryabhattai AFS007213 Isolate Unclassified
134 8022914991 Bacillus aryabhattai SQU-R12 Isolate Unclassified
135 8054280661 Metabacillus kandeliae GX 13764 Isolate Rhizosphere
136 8055531788 Lysinibacillus pakistanensis LY1 Isolate Rhizosphere
137 8057632132 Cytobacillus kochii RZ2 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 58.2
Metatranscriptomes 0.53
Isolates 41.27

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.7
Nodule 2.65
Rhizoplane 9.52
Rhizosphere 46.03
Stem 0
Stem Tuber 0
Unclassified 29.1

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25151J46595_10000158 3300003187 Bacteria 87889
2 JGI25151J46595_10000767 3300003187 Bacteria 26102
3 JGI25151J46595_10029212 3300003187 Bacteria 2186
4 rootH1_10003056 3300003316 Bacteria 31355
5 rootL2_10003046 3300003322 Bacteria 40497
6 Ga0006562J51391_1003696 3300003578 Bacteria 3134
7 Ga0055538_1000272 3300003751 Bacteria 26908
8 Ga0055532_1000046 3300003758 Bacteria 182389
9 Ga0055532_1000233 3300003758 Bacteria 41111
10 Ga0055532_1000781 3300003758 Bacteria 11107
11 Ga0055528_1003688 3300003790 Bacteria 7593
12 Ga0079104_1000029 3300006946 Bacteria 207648
13 Ga0114129_10025081 3300009147 Bacteria 8450
14 Ga0105242_10042101 3300009176 Bacteria 3686
15 Ga0157373_10006927 3300013100 Bacteria 8438
16 Ga0157371_10013846 3300013102 Bacteria 6109
17 Ga0157378_10005417 3300013297 Bacteria 11192
18 Ga0157372_10191616 3300013307 Bacteria 2368
19 Ga0163163_10037242 3300014325 Bacteria 4731
20 Ga0209784_100146 3300025224 Bacteria 64806
21 Ga0209147_100014 3300025229 Bacteria 597841
22 Ga0209147_100042 3300025229 Bacteria 301263
23 Ga0209147_100088 3300025229 Bacteria 179728
24 Ga0209147_100421 3300025229 Bacteria 27840
25 Ga0209673_1001544 3300025273 Bacteria 20804
26 Ga0209676_1000489 3300025292 Bacteria 63909
27 Ga0209676_1003483 3300025292 Bacteria 9648
28 Ga0209025_1000041 3300025294 Bacteria 373694
29 Ga0209025_1000368 3300025294 Bacteria 95103
30 Ga0209025_1001371 3300025294 Bacteria 32702
31 Ga0209025_1002897 3300025294 Bacteria 17128
32 Ga0209025_1006355 3300025294 Bacteria 9206
33 Ga0209025_1011284 3300025294 Bacteria 5910
34 Ga0209025_1048571 3300025294 Bacteria 1719
35 Ga0207655_1004809 3300025728 Bacteria 9406
36 Ga0207713_1005591 3300025735 Bacteria 7826
37 Ga0207710_10092427 3300025900 Bacteria 1418
38 Ga0207686_10016116 3300025934 Bacteria 4189
39 Ga0207709_10010077 3300025935 Bacteria 5206
40 Ga0209281_1000118 3300027111 Bacteria 208448
41 Ga0265330_10010903 3300031235 Bacteria 4271
42 Ga0265332_10002946 3300031238 Bacteria 8375
43 Ga0265320_10009133 3300031240 Bacteria 6004
44 Ga0265339_10004410 3300031249 Bacteria 9604
45 Ga0265331_10001006 3300031250 Bacteria 22094
46 Ga0265316_10001840 3300031344 Bacteria 22311
47 Ga0307408_100043466 3300031548 Bacteria 3197
48 Ga0307408_100130405 3300031548 Bacteria 1960
49 Ga0316575_10003775 3300031665 Bacteria 5268
50 Ga0265314_10007027 3300031711 Bacteria 9834
51 Ga0265342_10003053 3300031712 Bacteria 13999
52 Ga0316576_10043071 3300031727 Bacteria 3256
53 Ga0316576_10081263 3300031727 Bacteria 2405
54 Ga0307406_10016523 3300031901 Bacteria 4291
55 Ga0307416_100056364 3300032002 Bacteria 3171
56 Ga0307415_100039020 3300032126 Bacteria 3134
57 Ga0316574_0018259 3300035398 Bacteria 4119
58 Ga0400483_282256 3300039062 Bacteria 3700
59 Ga0451577_0000173 3300042876 Bacteria 142333
60 Ga0451577_0001190 3300042876 Bacteria 36491
61 Ga0451577_0042522 3300042876 Bacteria 4075
62 Ga0451577_0111825 3300042876 Bacteria 2444
63 Ga0451577_0126314 3300042876 Bacteria 2292
64 Ga0451577_0137970 3300042876 Bacteria 2190
65 Ga0453683_0000005 3300044673 Bacteria 741657
66 Ga0453683_0000263 3300044673 Bacteria 68710
67 Ga0453683_0079038 3300044673 Bacteria 2059
68 Ga0453683_0083420 3300044673 Bacteria 2002
69 Ga0453684_0000170 3300044712 Bacteria 289718
70 Ga0453684_0000542 3300044712 Bacteria 143132
71 Ga0453684_0000818 3300044712 Bacteria 105450
72 Ga0453684_0001007 3300044712 Bacteria 91242
73 Ga0453684_0004000 3300044712 Bacteria 32155
74 Ga0453684_0008984 3300044712 Bacteria 17657
75 Ga0453684_0009192 3300044712 Bacteria 17369
76 Ga0453684_0044150 3300044712 Bacteria 5972
77 Ga0453684_0069697 3300044712 Bacteria 4458
78 Ga0453684_0294760 3300044712 Bacteria 1845
79 Ga0453684_0366726 3300044712 Bacteria 1620
80 Ga0451576_0000216 3300045051 Bacteria 142333
81 Ga0451576_0000472 3300045051 Bacteria 91251
82 Ga0451576_0001619 3300045051 Bacteria 37784
83 Ga0451576_0010251 3300045051 Bacteria 10774
84 Ga0495603_0096453 3300046455 Bacteria 1727
85 Ga0495585_0037588 3300046492 Bacteria 2726
86 Ga0495622_0070660 3300046557 Bacteria 1611
87 Ga0496100_0026270 3300048903 Bacteria 3568
88 Ga0496102_0003430 3300048905 Bacteria 13431
89 Ga0496102_0043295 3300048905 Bacteria 4081
90 Ga0496103_0025771 3300048906 Bacteria 3556
91 Ga0496103_0041397 3300048906 Bacteria 2832
92 Ga0496104_0008076 3300048907 Bacteria 9336
93 Ga0496105_0000730 3300048908 Bacteria 22282
94 Ga0496106_0000104 3300048909 Bacteria 64967
95 Ga0496107_0008464 3300048910 Bacteria 7120
96 Ga0496108_0031881 3300048911 Bacteria 4374
97 Ga0496109_0303273 3300048912 Bacteria 1506
98 Ga0496110_0000084 3300048913 Bacteria 49140
99 Ga0496110_0009809 3300048913 Bacteria 7756
100 Ga0496111_0002898 3300048914 Bacteria 10474
101 Ga0496111_0007636 3300048914 Bacteria 7107
102 Ga0496113_0022398 3300048916 Bacteria 4468
103 Ga0496116_0006145 3300048919 Bacteria 10981
104 Ga0496119_0002859 3300048922 Bacteria 18413
105 Ga0496122_0045837 3300048925 Bacteria 3392
106 Ga0496123_0045480 3300048926 Bacteria 2990
107 Ga0496124_0052125 3300048927 Bacteria 3478
108 Ga0496125_0030976 3300048928 Bacteria 4776
109 Ga0496126_0024728 3300048929 Bacteria 5793
110 nmdc:mga05p37_20201_c1 3300050507 Bacteria 8061
111 Ga0500616_0000232 3300053153 Bacteria 87382

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025900 Ga0207710_10092427 Ga0207710_100924272 425
2 3300048912 Ga0496109_0303273 Ga0496109_0303273_168_1490 428
3 3300014325 Ga0163163_10037242 Ga0163163_100372426 450
4 3300042876 Ga0451577_0111825 Ga0451577_0111825_998_2395 461
5 3300044712 Ga0453684_0000818 Ga0453684_0000818_101072_102631 481
6 3300044712 Ga0453684_0366726 Ga0453684_0366726_26_1585 481
7 3300035398 Ga0316574_0018259 Ga0316574_0018259_2349_3884 489
8 3300048913 Ga0496110_0009809 Ga0496110_0009809_2662_4203 490
9 3300025292 Ga0209676_1000489 Ga0209676_10004895 494
10 3300031665 Ga0316575_10003775 Ga0316575_100037754 495
11 3300048906 Ga0496103_0041397 Ga0496103_0041397_39_1580 497
12 3300003758 Ga0055532_1000233 Ga0055532_100023327 498
13 3300025229 Ga0209147_100088 Ga0209147_10008830 498
14 3300048905 Ga0496102_0003430 Ga0496102_0003430_7193_8743 498
15 3300003758 Ga0055532_1000046 Ga0055532_1000046183 500
16 3300025229 Ga0209147_100014 Ga0209147_100014243 500
17 3300025294 Ga0209025_1002897 Ga0209025_10028976 500
18 3300042876 Ga0451577_0000173 Ga0451577_0000173_108232_109791 504
19 3300044673 Ga0453683_0000263 Ga0453683_0000263_8356_9915 504
20 3300044712 Ga0453684_0000542 Ga0453684_0000542_109031_110590 504
21 3300045051 Ga0451576_0000216 Ga0451576_0000216_108232_109791 504
22 iso_pu_bacteria 2585427633 2585998199 505
23 iso_pu_bacteria 2585427634 2586002776 505
24 iso_pu_bacteria 8005658619 8005662533 505
25 3300006946 Ga0079104_1000029 Ga0079104_100002914 509
26 3300027111 Ga0209281_1000118 Ga0209281_100011814 509
27 3300053153 Ga0500616_0000232 Ga0500616_0000232_37517_39049 509
28 iso_pu_bacteria 2593339131 2595091548 509
29 iso_pu_bacteria 2671180330 2672335620 509
30 iso_pu_bacteria 2738543017 2739270265 509
31 iso_pu_bacteria 2757320391 2757568083 509
32 iso_pu_bacteria 2775507177 2777763395 509
33 iso_pu_bacteria 2775507192 2777838554 509
34 iso_pu_bacteria 2816332186 2816865134 509
35 iso_pu_bacteria 2842682962 2842684003 509
36 iso_pu_bacteria 2857586860 2857590460 509
37 iso_pu_bacteria 2738541299 2738839856 511
38 iso_pu_bacteria 2788500588 2791214205 511
39 iso_pu_bacteria 2808606364 2808869329 511
40 iso_pu_bacteria 2818991451 2819626208 511
41 iso_pu_bacteria 2852673933 2852675433 511
42 iso_pu_bacteria 2904606771 2904608013 511
43 iso_pu_bacteria 2919414237 2919415864 511
44 iso_pu_bacteria 2928510474 2928512516 511
45 iso_pu_bacteria 2936361878 2936367282 511
46 iso_pu_bacteria 2939593269 2939596930 511
47 iso_pu_bacteria 2964375228 2964379137 511
48 iso_pu_bacteria 3001892409 3001897898 511
49 iso_pu_bacteria 3006826541 3006831357 511
50 iso_pu_bacteria 3006973921 3006975773 511
51 iso_pu_bacteria 8055531788 8055535135 511
52 iso_pu_bacteria 2510917027 2511180532 512
53 iso_pu_bacteria 2593339131 2595088037 512
54 iso_pu_bacteria 2643221731 2644715888 512
55 iso_pu_bacteria 2643221732 2644724241 512
56 iso_pu_bacteria 2671180330 2672336858 512
57 iso_pu_bacteria 2738541295 2738813336 512
58 iso_pu_bacteria 2738541295 2738814384 512
59 iso_pu_bacteria 2757320391 2757566024 512
60 iso_pu_bacteria 2775507177 2777762211 512
61 iso_pu_bacteria 2775507192 2777838158 512
62 iso_pu_bacteria 2816332186 2816862683 512
63 iso_pu_bacteria 2818991465 2819709360 512
64 iso_pu_bacteria 2842682962 2842684394 512
65 iso_pu_bacteria 2842882022 2842884392 512
66 iso_pu_bacteria 2849139964 2849144361 512
67 iso_pu_bacteria 2857465823 2857467226 512
68 iso_pu_bacteria 2857581216 2857581721 512
69 iso_pu_bacteria 2857581216 2857582418 512
70 iso_pu_bacteria 2857591370 2857592018 512
71 iso_pu_bacteria 2857604169 2857604216 512
72 iso_pu_bacteria 2857609550 2857610872 512
73 iso_pu_bacteria 2881644220 2881644306 512
74 iso_pu_bacteria 2904524088 2904524578 512
75 iso_pu_bacteria 2915606848 2915607586 512
76 iso_pu_bacteria 2919143609 2919146826 512
77 iso_pu_bacteria 2919414237 2919415039 512
78 iso_pu_bacteria 2919414237 2919415338 512
79 iso_pu_bacteria 2919517244 2919518749 512
80 iso_pu_bacteria 2919720352 2919723116 512
81 iso_pu_bacteria 2928093941 2928096357 512
82 iso_pu_bacteria 2929004312 2929006267 512
83 iso_pu_bacteria 2956897341 2956901925 512
84 iso_pu_bacteria 2960319331 2960319978 512
85 iso_pu_bacteria 2960375949 2960380810 512
86 iso_pu_bacteria 2990275345 2990277582 512
87 iso_pu_bacteria 3001267043 3001268285 512
88 iso_pu_bacteria 3001272096 3001273781 512
89 iso_pu_bacteria 3006978542 3006981678 512
90 iso_pu_bacteria 3006984091 3006984641 512
91 iso_pu_bacteria 3006988479 3006989047 512
92 iso_pu_bacteria 8022893055 8022898064 512
93 iso_pu_bacteria 8022914991 8022917246 512
94 iso_pu_bacteria 8057632132 8057635291 512
95 3300003187 JGI25151J46595_10000767 JGI25151J46595_1000076718 513
96 3300025294 Ga0209025_1000041 Ga0209025_1000041148 513
97 3300025294 Ga0209025_1001371 Ga0209025_100137131 513
98 iso_pu_bacteria 2512564013 2512639902 513
99 iso_pu_bacteria 2738543010 2739230400 513
100 iso_pu_bacteria 2898907183 2898909913 513
101 iso_pu_bacteria 2915597211 2915601325 513
102 iso_pu_bacteria 2929183550 2929186481 513
103 iso_pu_bacteria 8054280661 8054281343 513
104 3300003187 JGI25151J46595_10029212 JGI25151J46595_100292121 515
105 3300003751 Ga0055538_1000272 Ga0055538_10002726 515
106 3300009147 Ga0114129_10025081 Ga0114129_100250817 515
107 3300013100 Ga0157373_10006927 Ga0157373_100069275 515
108 3300013102 Ga0157371_10013846 Ga0157371_100138466 515
109 3300025224 Ga0209784_100146 Ga0209784_10014665 515
110 3300025292 Ga0209676_1003483 Ga0209676_10034838 515
111 3300025294 Ga0209025_1006355 Ga0209025_10063556 515
112 3300025294 Ga0209025_1011284 Ga0209025_10112842 515
113 3300031235 Ga0265330_10010903 Ga0265330_100109033 515
114 3300031238 Ga0265332_10002946 Ga0265332_100029464 515
115 3300031240 Ga0265320_10009133 Ga0265320_100091335 515
116 3300031249 Ga0265339_10004410 Ga0265339_100044104 515
117 3300031250 Ga0265331_10001006 Ga0265331_1000100613 515
118 3300031344 Ga0265316_10001840 Ga0265316_1000184013 515
119 3300031548 Ga0307408_100043466 Ga0307408_1000434662 515
120 3300031711 Ga0265314_10007027 Ga0265314_100070274 515
121 3300031712 Ga0265342_10003053 Ga0265342_100030533 515
122 3300031727 Ga0316576_10043071 Ga0316576_100430712 515
123 3300031727 Ga0316576_10081263 Ga0316576_100812633 515
124 3300031901 Ga0307406_10016523 Ga0307406_100165234 515
125 3300032126 Ga0307415_100039020 Ga0307415_1000390203 515
126 3300039062 Ga0400483_282256 Ga0400483_282256_1959_3518 515
127 3300042876 Ga0451577_0001190 Ga0451577_0001190_13165_14724 515
128 3300042876 Ga0451577_0042522 Ga0451577_0042522_2230_3789 515
129 3300042876 Ga0451577_0126314 Ga0451577_0126314_517_2076 515
130 3300042876 Ga0451577_0137970 Ga0451577_0137970_72_1631 515
131 3300044673 Ga0453683_0000005 Ga0453683_0000005_422640_424199 515
132 3300044673 Ga0453683_0079038 Ga0453683_0079038_73_1632 515
133 3300044673 Ga0453683_0083420 Ga0453683_0083420_25_1584 515
134 3300044712 Ga0453684_0000170 Ga0453684_0000170_188172_189731 515
135 3300044712 Ga0453684_0001007 Ga0453684_0001007_16386_17945 515
136 3300044712 Ga0453684_0004000 Ga0453684_0004000_4537_6096 515
137 3300044712 Ga0453684_0008984 Ga0453684_0008984_8458_10017 515
138 3300044712 Ga0453684_0009192 Ga0453684_0009192_3874_5433 515
139 3300044712 Ga0453684_0044150 Ga0453684_0044150_2475_4034 515
140 3300044712 Ga0453684_0069697 Ga0453684_0069697_357_1916 515
141 3300044712 Ga0453684_0294760 Ga0453684_0294760_84_1643 515
142 3300045051 Ga0451576_0000472 Ga0451576_0000472_16386_17945 515
143 3300045051 Ga0451576_0001619 Ga0451576_0001619_1019_2578 515
144 3300045051 Ga0451576_0010251 Ga0451576_0010251_2269_3828 515
145 iso_pu_bacteria 2977254563 2977256708 515
146 3300003187 JGI25151J46595_10000158 JGI25151J46595_1000015851 516
147 3300003316 rootH1_10003056 rootH1_1000305623 516
148 3300003322 rootL2_10003046 rootL2_1000304611 516
149 3300003578 Ga0006562J51391_1003696 Ga0006562J51391_10036962 516
150 3300003758 Ga0055532_1000781 Ga0055532_10007817 516
151 3300003790 Ga0055528_1003688 Ga0055528_10036883 516
152 3300009176 Ga0105242_10042101 Ga0105242_100421013 516
153 3300013297 Ga0157378_10005417 Ga0157378_100054174 516
154 3300013307 Ga0157372_10191616 Ga0157372_101916162 516
155 3300025229 Ga0209147_100042 Ga0209147_10004249 516
156 3300025229 Ga0209147_100421 Ga0209147_1004213 516
157 3300025273 Ga0209673_1001544 Ga0209673_100154413 516
158 3300025294 Ga0209025_1000368 Ga0209025_100036825 516
159 3300025294 Ga0209025_1048571 Ga0209025_10485712 516
160 3300025728 Ga0207655_1004809 Ga0207655_10048095 516
161 3300025735 Ga0207713_1005591 Ga0207713_10055914 516
162 3300025934 Ga0207686_10016116 Ga0207686_100161163 516
163 3300025935 Ga0207709_10010077 Ga0207709_100100772 516
164 3300031548 Ga0307408_100130405 Ga0307408_1001304051 516
165 3300032002 Ga0307416_100056364 Ga0307416_1000563643 516
166 3300046455 Ga0495603_0096453 Ga0495603_0096453_32_1582 516
167 3300046492 Ga0495585_0037588 Ga0495585_0037588_721_2271 516
168 3300046557 Ga0495622_0070660 Ga0495622_0070660_17_1567 516
169 3300048903 Ga0496100_0026270 Ga0496100_0026270_670_2220 516
170 3300048905 Ga0496102_0043295 Ga0496102_0043295_1350_2900 516
171 3300048906 Ga0496103_0025771 Ga0496103_0025771_825_2375 516
172 3300048907 Ga0496104_0008076 Ga0496104_0008076_2525_4075 516
173 3300048908 Ga0496105_0000730 Ga0496105_0000730_13128_14678 516
174 3300048909 Ga0496106_0000104 Ga0496106_0000104_58699_60249 516
175 3300048910 Ga0496107_0008464 Ga0496107_0008464_560_2110 516
176 3300048911 Ga0496108_0031881 Ga0496108_0031881_378_1928 516
177 3300048913 Ga0496110_0000084 Ga0496110_0000084_17472_19022 516
178 3300048914 Ga0496111_0002898 Ga0496111_0002898_426_1976 516
179 3300048914 Ga0496111_0007636 Ga0496111_0007636_2580_4130 516
180 3300048916 Ga0496113_0022398 Ga0496113_0022398_235_1785 516
181 3300048919 Ga0496116_0006145 Ga0496116_0006145_2320_3870 516
182 3300048922 Ga0496119_0002859 Ga0496119_0002859_10182_11732 516
183 3300048925 Ga0496122_0045837 Ga0496122_0045837_1614_3164 516
184 3300048926 Ga0496123_0045480 Ga0496123_0045480_540_2090 516
185 3300048927 Ga0496124_0052125 Ga0496124_0052125_217_1767 516
186 3300048928 Ga0496125_0030976 Ga0496125_0030976_1959_3509 516
187 3300048929 Ga0496126_0024728 Ga0496126_0024728_2310_3860 516
188 3300050507 nmdc:mga05p37_20201_c1 nmdc:mga05p37_20201_c1_2842_4452 516
189 iso_pu_bacteria 2936340661 2936341883 516

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01039

Carboxyl_trans

Carboxyl transferase domain

45

534

0.98

PF03255

ACCA

Acetyl co-enzyme A carboxylase carboxyltransferase-like

281

474

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
1vrg-assembly1.cif.gz_F crystal structure of propionyl-coa carboxylase, beta subunit (tm0716) from thermotoga maritima at 2.30 a resolution 0.962 2 516
1on9-assembly1.cif.gz_C transcarboxylase 12s crystal structure: hexamer assembly and substrate binding to a multienzyme core (with hydrolyzed methylmalonyl-coenzyme a bound) 0.9609 1 516
1on3-assembly1.cif.gz_E transcarboxylase 12s crystal structure: hexamer assembly and substrate binding to a multienzyme core (with methylmalonyl-coenzyme a and methylmalonic acid bound) 0.9608 1 516
1vrg-assembly1.cif.gz_F crystal structure of propionyl-coa carboxylase, beta subunit (tm0716) from thermotoga maritima at 2.30 a resolution 0.9602 2 516
8pn8-assembly1.cif.gz_F engineered glycolyl-coa carboxylase (l100n variant) with bound coa 0.96 9 516
ID Description Score Start End Superfamily
af_Q20676_22_285_3.90.226.10 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 0.9655 5 257 3.90.226.10
4l6wA02 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 0.9612 268 497 3.90.226.10
af_O53578_4_260_3.90.226.10 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 0.955 1 259 3.90.226.10
af_O53578_4_260_3.90.226.10 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 0.937 1 259 3.90.226.10
4g2rA02 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 0.929 270 497 3.90.226.10
ID Description Score Start End GO Terms
AF-H1QFV4-F1-model_v4 deleted 0.9942 278 365
AF-H1QFV4-F1-model_v4 deleted 0.9831 278 365
AF-U3I3T4-F1-model_v4 Propionyl-CoA carboxylase beta chain, mitochondrial (EC 6.4.1.3) (Propanoyl-CoA:carbon dioxide ligase subunit beta) 0.98 116 369 GO:0004658
GO:0005759
GO:1902494
AF-T1WP72-F1-model_v4 Acetyl-CoA/propionyl-CoA carboxylase 0.9768 136 339 GO:0004658
GO:0009317
AF-A0A7K2JXV7-F1-model_v4 Methylmalonyl-CoA carboxyltransferase 0.9765 1 347 GO:0004658
GO:0009317
GO:0016740

Feature Viewer

pLDDT pTM Quality
88.11 0.89 High
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Predicted Structure (AlphaFold2)

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