F290898

General Info

Members Datasets Scaffolds Average Seq Length
189 118 189 433

Family's Representative Sequence

Representative Sequence 3300009551|Ga0105238_10120646|Ga0105238_101206462
Length 511
Sequence MFVIVAQVYQAHHPKHNHQRQKVPGFNVAKKPPNMMQVPLIHLAYDYTSLSNARLNCFGRTDLPKLQQLRAASVWEILGVMHIFFSGIGGAGIGPLAMIAKQAGYEVSGSDKQDSQYIAHLKKQGIDHIVIGQTIEQIAAEHDRSPIDWYVYSSAVSKEQPDAPEFVFCREQNIHMSKRDELLNKILEDKKLKLIAIAGTHGKTTTTAMAIWLLKQLNIPLSYLLPAKSSFADMGSYDPASEYFVYECDEYDKNFLSYTPYLALIAGIDWDHPDVFPTREIYNATFREFLEQCERSVLWQGDVERLEIEPTETQRVLNEDDPAIQTALTLPGLVNRQNAWLVAQSLQPIINKPLDELLAHLNRFPGVGRRFEEIMPGLYTDYAHTPPKIRGALQLAHEVAGENVVVVYEGLHNTRQHFIKDDLVHLFDSVKHLYIVPSYLAREDQSLKLLSQDDLKLMLSAEAQTVADVADLDDKLRQTILTHLQTGDTVLCISGGGGKSLDEWLRKEFGN

Samples

Sample ID Description Type Environment
1 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
2 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
6 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
7 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
8 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
9 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
10 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
11 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
12 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
13 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
14 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
15 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
16 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
17 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
18 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
19 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
20 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
21 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
22 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
23 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
24 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
25 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
26 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
27 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
28 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
29 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
30 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
31 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
32 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
33 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
34 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
35 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
36 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
37 3300009986 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_92 metaG Metagenome Rhizosphere
38 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
39 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
40 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
41 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
42 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
43 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
44 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
65 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
68 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
69 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
70 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
71 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
72 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
73 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
74 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
75 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
76 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
77 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
78 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
79 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
80 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
81 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
82 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
83 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
84 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
85 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
86 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
87 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
88 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
89 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
90 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
91 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
92 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
93 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
94 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
95 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
96 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
97 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
98 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
99 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
100 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
101 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
102 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
103 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
104 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
105 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
106 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
107 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
108 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
109 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
110 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
111 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
112 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
113 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
114 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
115 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
116 3300053143 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 endosphere Metagenome Endosphere
117 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
118 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 20.63
Nodule 0
Rhizoplane 1.06
Rhizosphere 77.78
Stem 0
Stem Tuber 0
Unclassified 0.53

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24737J22298_10000032 3300001990 Bacteria 41558
2 JGI24735J21928_10000106 3300002067 Bacteria 30883
3 Ga0070658_10000051 3300005327 Bacteria 118657
4 Ga0070658_10004932 3300005327 Bacteria 10877
5 Ga0070658_10008384 3300005327 Bacteria 8309
6 Ga0070683_100001099 3300005329 Bacteria 20378
7 Ga0070683_100126984 3300005329 Bacteria 2411
8 Ga0070683_100209812 3300005329 Bacteria 1850
9 Ga0070671_100000001 3300005355 Bacteria 1228151
10 Ga0070671_100045362 3300005355 Bacteria 3654
11 Ga0070674_100006252 3300005356 Bacteria 6932
12 Ga0070667_100000001 3300005367 Bacteria 1108638
13 Ga0070667_100004243 3300005367 Bacteria 12104
14 Ga0070678_100041243 3300005456 Bacteria 3271
15 Ga0070681_10057261 3300005458 Bacteria 3878
16 Ga0070681_10208555 3300005458 Bacteria 1870
17 Ga0068867_100020679 3300005459 Unclassified 4690
18 Ga0070685_10000637 3300005466 Bacteria 19172
19 Ga0070684_100000284 3300005535 Bacteria 35219
20 Ga0070684_100095320 3300005535 Bacteria 2651
21 Ga0070693_100009992 3300005547 Bacteria 4736
22 Ga0068855_100000001 3300005563 Bacteria 818777
23 Ga0068855_100042320 3300005563 Bacteria 5397
24 Ga0068855_100143460 3300005563 Bacteria 2720
25 Ga0068857_100001356 3300005577 Bacteria 19284
26 Ga0068856_100007205 3300005614 Bacteria 10848
27 Ga0068863_100033994 3300005841 Bacteria 4857
28 Ga0068860_100048079 3300005843 Bacteria 4066
29 Ga0068860_100097724 3300005843 Bacteria 2800
30 Ga0081455_10000008 3300005937 Bacteria 256558
31 Ga0075368_10000558 3300006042 Bacteria 11156
32 Ga0075363_100000211 3300006048 Bacteria 16042
33 Ga0075367_10009269 3300006178 Bacteria 5137
34 Ga0075369_10000006 3300006186 Bacteria 132271
35 Ga0075366_10000146 3300006195 Bacteria 29802
36 Ga0097621_100000031 3300006237 Bacteria 70439
37 Ga0075370_10004062 3300006353 Bacteria 7038
38 Ga0068871_100000011 3300006358 Bacteria 105600
39 Ga0075428_100006982 3300006844 Bacteria 12526
40 Ga0075430_100019591 3300006846 Bacteria 5756
41 Ga0105240_10000003 3300009093 Bacteria 1183681
42 Ga0105240_10000048 3300009093 Bacteria 237451
43 Ga0105240_10065081 3300009093 Bacteria 4526
44 Ga0105245_10000007 3300009098 Bacteria 312285
45 Ga0105245_10000094 3300009098 Bacteria 85857
46 Ga0105243_10000001 3300009148 Bacteria 1156578
47 Ga0105241_10000009 3300009174 Bacteria 258876
48 Ga0105241_10099946 3300009174 Bacteria 2304
49 Ga0105241_10113139 3300009174 Bacteria 2175
50 Ga0105241_10176117 3300009174 Unclassified 1770
51 Ga0105242_10000001 3300009176 Bacteria 574039
52 Ga0105242_10005812 3300009176 Bacteria 9502
53 Ga0105237_10014336 3300009545 Bacteria 8297
54 Ga0105237_10374915 3300009545 Bacteria 1428
55 Ga0105238_10120646 3300009551 Bacteria 2601
56 Ga0105033_100235 3300009986 Bacteria 4351
57 Ga0105239_10013266 3300010375 Bacteria 9156
58 Ga0157369_10000054 3300013105 Bacteria 162631
59 Ga0157369_10012582 3300013105 Bacteria 9599
60 Ga0157374_10000014 3300013296 Bacteria 396846
61 Ga0157374_10000056 3300013296 Bacteria 117163
62 Ga0157374_10000811 3300013296 Bacteria 27394
63 Ga0157374_10090787 3300013296 Unclassified 2912
64 Ga0163162_10106095 3300013306 Bacteria 2904
65 Ga0157372_10173655 3300013307 Bacteria 2494
66 Ga0163163_10012972 3300014325 Bacteria 7612
67 Ga0207647_10000167 3300025904 Bacteria 52189
68 Ga0207705_10000019 3300025909 Bacteria 317770
69 Ga0207705_10004206 3300025909 Bacteria 10919
70 Ga0207654_10000002 3300025911 Bacteria 1460142
71 Ga0207707_10002359 3300025912 Bacteria 17010
72 Ga0207707_10007229 3300025912 Bacteria 9663
73 Ga0207695_10000005 3300025913 Bacteria 1196715
74 Ga0207695_10002353 3300025913 Bacteria 28100
75 Ga0207695_10103535 3300025913 Unclassified 2837
76 Ga0207660_10071264 3300025917 Bacteria 2528
77 Ga0207652_10006817 3300025921 Bacteria 9207
78 Ga0207687_10000008 3300025927 Bacteria 497738
79 Ga0207687_10000060 3300025927 Bacteria 84771
80 Ga0207644_10000001 3300025931 Bacteria 1243214
81 Ga0207644_10030888 3300025931 Bacteria 3729
82 Ga0207686_10000001 3300025934 Bacteria 1169580
83 Ga0207686_10002757 3300025934 Bacteria 9521
84 Ga0207709_10000002 3300025935 Bacteria 1171536
85 Ga0207669_10003223 3300025937 Bacteria 7052
86 Ga0207661_10000047 3300025944 Bacteria 100535
87 Ga0207667_10000003 3300025949 Bacteria 822935
88 Ga0207667_10000554 3300025949 Bacteria 48989
89 Ga0207667_10033548 3300025949 Bacteria 5518
90 Ga0207658_10000003 3300025986 Bacteria 1151934
91 Ga0207658_10040418 3300025986 Bacteria 3371
92 Ga0207639_10174521 3300026041 Bacteria 1823
93 Ga0207702_10002725 3300026078 Bacteria 16555
94 Ga0207641_10105338 3300026088 Bacteria 2491
95 Ga0207674_10000636 3300026116 Bacteria 45638
96 Ga0207683_10073843 3300026121 Bacteria 3017
97 Ga0209813_10000003 3300027866 Bacteria 207060
98 Ga0268266_10000942 3300028379 Bacteria 37115
99 Ga0268264_10043793 3300028381 Bacteria 3711
100 Ga0265337_1000382 3300028556 Bacteria 23795
101 Ga0265337_1000604 3300028556 Bacteria 18901
102 Ga0265337_1004987 3300028556 Bacteria 5389
103 Ga0265326_10000037 3300028558 Bacteria 89044
104 Ga0265326_10000414 3300028558 Bacteria 17056
105 Ga0265326_10001291 3300028558 Bacteria 8893
106 Ga0265326_10002405 3300028558 Bacteria 6306
107 Ga0265319_1001770 3300028563 Bacteria 12386
108 Ga0265319_1021515 3300028563 Unclassified 2366
109 Ga0265334_10000013 3300028573 Bacteria 155968
110 Ga0265334_10000689 3300028573 Bacteria 16909
111 Ga0265334_10002696 3300028573 Bacteria 8200
112 Ga0265334_10004397 3300028573 Bacteria 6258
113 Ga0265334_10004575 3300028573 Bacteria 6127
114 Ga0265334_10004831 3300028573 Bacteria 5924
115 Ga0265334_10024149 3300028573 Unclassified 2468
116 Ga0265318_10008552 3300028577 Unclassified 4548
117 Ga0265318_10029392 3300028577 Bacteria 2143
118 Ga0265323_10004651 3300028653 Bacteria 5895
119 Ga0265322_10002445 3300028654 Bacteria 5732
120 Ga0265322_10004826 3300028654 Unclassified 3997
121 Ga0265322_10006031 3300028654 Bacteria 3572
122 Ga0265322_10009325 3300028654 Unclassified 2849
123 Ga0265336_10000020 3300028666 Bacteria 213480
124 Ga0265336_10000760 3300028666 Bacteria 17103
125 Ga0265336_10000969 3300028666 Bacteria 14311
126 Ga0265336_10012749 3300028666 Unclassified 2819
127 Ga0265338_10000060 3300028800 Bacteria 197991
128 Ga0265338_10000074 3300028800 Bacteria 181183
129 Ga0265338_10000093 3300028800 Bacteria 168444
130 Ga0265338_10000758 3300028800 Bacteria 55090
131 Ga0265338_10001694 3300028800 Bacteria 35016
132 Ga0265338_10006928 3300028800 Bacteria 14258
133 Ga0265338_10009517 3300028800 Bacteria 11571
134 Ga0265338_10018548 3300028800 Bacteria 7442
135 Ga0265338_10178988 3300028800 Unclassified 1618
136 Ga0265338_10178990 3300028800 Bacteria 1618
137 Ga0265332_10004508 3300031238 Bacteria 6528
138 Ga0265328_10008676 3300031239 Unclassified 4175
139 Ga0265325_10018360 3300031241 Unclassified 3877
140 Ga0265329_10004450 3300031242 Bacteria 5821
141 Ga0265340_10000138 3300031247 Bacteria 36616
142 Ga0265340_10026377 3300031247 Unclassified 2938
143 Ga0265339_10024182 3300031249 Bacteria 3504
144 Ga0265331_10006425 3300031250 Bacteria 6947
145 Ga0265327_10000025 3300031251 Bacteria 380054
146 Ga0265327_10006222 3300031251 Bacteria 9622
147 Ga0265313_10008610 3300031595 Bacteria 6750
148 Ga0265314_10011514 3300031711 Bacteria 7293
149 Ga0265314_10085496 3300031711 Unclassified 2068
150 Ga0265342_10005169 3300031712 Bacteria 10045
151 Ga0395905_0001808 3300037471 Bacteria 24746
152 Ga0395901_0002373 3300038443 Bacteria 19147
153 Ga0495672_0000010 3300047320 Bacteria 545038
154 Ga0496100_0046415 3300048903 Bacteria 2793
155 Ga0496112_0007409 3300048915 Bacteria 9741
156 Ga0496126_0118759 3300048929 Bacteria 2295
157 nmdc:mga03n38_42_c2 3300050490 Bacteria 23810
158 nmdc:mga0k408_4921_c1 3300050493 Bacteria 7079
159 nmdc:mga06z11_21_c1 3300050494 Bacteria 69936
160 nmdc:mga06z11_2_c1 3300050494 Bacteria 169056
161 nmdc:mga04h51_3_c1 3300050495 Bacteria 207078
162 nmdc:mga07m45_2284_c1 3300050496 Bacteria 8961
163 nmdc:mga0qj67_15227_c1 3300050509 Bacteria 5820
164 nmdc:mga0sz30_2_c1 3300050516 Bacteria 626403
165 Ga0500610_0000027 3300053079 Bacteria 53458
166 Ga0500643_000034 3300053087 Bacteria 185705
167 Ga0500643_004947 3300053087 Bacteria 5859
168 Ga0500644_0000052 3300053088 Bacteria 69890
169 Ga0500646_0000188 3300053090 Bacteria 18682
170 Ga0500583_0000105 3300053092 Bacteria 44085
171 Ga0500583_0013743 3300053092 Bacteria 3143
172 Ga0500651_0000011 3300053093 Bacteria 246573
173 Ga0500651_0012382 3300053093 Bacteria 5172
174 Ga0500650_0000014 3300053098 Bacteria 74133
175 Ga0500555_000001 3300053103 Bacteria 1353713
176 Ga0500555_000002 3300053103 Bacteria 1314346
177 Ga0500562_000002 3300053108 Bacteria 977234
178 Ga0500594_0000001 3300053118 Bacteria 1178472
179 Ga0500594_0000070 3300053118 Bacteria 32225
180 Ga0500614_000356 3300053123 Bacteria 11943
181 Ga0500628_000018 3300053129 Bacteria 85560
182 Ga0500642_0102501 3300053130 Unclassified 1332
183 Ga0500652_000009 3300053131 Bacteria 163737
184 Ga0500561_0000002 3300053137 Bacteria 394147
185 Ga0500577_0000490 3300053142 Bacteria 10156
186 Ga0500579_003327 3300053143 Bacteria 9651
187 Ga0500589_000003 3300053147 Bacteria 220717
188 Ga0500589_036462 3300053147 Bacteria 2298
189 Ga0500633_0010924 3300053160 Bacteria 2449

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005367 Ga0070667_100004243 Ga0070667_10000424312 408
2 3300005456 Ga0070678_100041243 Ga0070678_1000412432 408
3 3300025986 Ga0207658_10040418 Ga0207658_100404182 408
4 3300026121 Ga0207683_10073843 Ga0207683_100738432 408
5 3300028558 Ga0265326_10000037 Ga0265326_1000003778 410
6 3300028573 Ga0265334_10004831 Ga0265334_100048316 410
7 3300028666 Ga0265336_10000020 Ga0265336_1000002099 410
8 3300028800 Ga0265338_10000093 Ga0265338_10000093156 410
9 3300053129 Ga0500628_000018 Ga0500628_000018_68351_69652 411
10 3300006178 Ga0075367_10009269 Ga0075367_100092696 416
11 3300006195 Ga0075366_10000146 Ga0075366_1000014631 416
12 3300009545 Ga0105237_10374915 Ga0105237_103749151 416
13 3300010375 Ga0105239_10013266 Ga0105239_100132668 416
14 3300050493 nmdc:mga0k408_4921_c1 nmdc:mga0k408_4921_c1_2525_3820 416
15 3300050494 nmdc:mga06z11_21_c1 nmdc:mga06z11_21_c1_43881_45176 416
16 3300053118 Ga0500594_0000070 Ga0500594_0000070_28983_30284 417
17 3300005355 Ga0070671_100000001 Ga0070671_1000000011066 419
18 3300028653 Ga0265323_10004651 Ga0265323_100046516 421
19 3300005458 Ga0070681_10057261 Ga0070681_100572614 423
20 3300025912 Ga0207707_10002359 Ga0207707_1000235922 423
21 3300005327 Ga0070658_10000051 Ga0070658_1000005182 426
22 3300025909 Ga0207705_10000019 Ga0207705_10000019120 426
23 3300005547 Ga0070693_100009992 Ga0070693_1000099926 427
24 3300005937 Ga0081455_10000008 Ga0081455_10000008289 427
25 3300013105 Ga0157369_10012582 Ga0157369_100125824 427
26 3300031251 Ga0265327_10000025 Ga0265327_10000025175 427
27 3300037471 Ga0395905_0001808 Ga0395905_0001808_19219_20508 427
28 3300038443 Ga0395901_0002373 Ga0395901_0002373_16785_18074 427
29 3300048903 Ga0496100_0046415 Ga0496100_0046415_1266_2555 427
30 3300005327 Ga0070658_10004932 Ga0070658_100049323 428
31 3300005329 Ga0070683_100001099 Ga0070683_10000109916 428
32 3300005535 Ga0070684_100000284 Ga0070684_10000028433 428
33 3300009093 Ga0105240_10000048 Ga0105240_1000004884 428
34 3300025909 Ga0207705_10004206 Ga0207705_100042063 428
35 3300025913 Ga0207695_10002353 Ga0207695_1000235314 428
36 3300025944 Ga0207661_10000047 Ga0207661_1000004726 428
37 3300053108 Ga0500562_000002 Ga0500562_000002_463415_464704 428
38 3300005459 Ga0068867_100020679 Ga0068867_1000206793 429
39 3300005535 Ga0070684_100095320 Ga0070684_1000953203 429
40 3300009093 Ga0105240_10000003 Ga0105240_10000003233 429
41 3300009098 Ga0105245_10000094 Ga0105245_1000009436 429
42 3300009148 Ga0105243_10000001 Ga0105243_100000011017 429
43 3300009174 Ga0105241_10176117 Ga0105241_101761172 429
44 3300009176 Ga0105242_10000001 Ga0105242_10000001241 429
45 3300009545 Ga0105237_10014336 Ga0105237_100143365 429
46 3300013296 Ga0157374_10000056 Ga0157374_100000568 429
47 3300013296 Ga0157374_10090787 Ga0157374_100907872 429
48 3300013306 Ga0163162_10106095 Ga0163162_101060953 429
49 3300013307 Ga0157372_10173655 Ga0157372_101736553 429
50 3300025913 Ga0207695_10000005 Ga0207695_10000005240 429
51 3300025927 Ga0207687_10000060 Ga0207687_1000006048 429
52 3300025934 Ga0207686_10000001 Ga0207686_10000001123 429
53 3300025935 Ga0207709_10000002 Ga0207709_10000002240 429
54 3300028563 Ga0265319_1001770 Ga0265319_10017708 429
55 3300028573 Ga0265334_10024149 Ga0265334_100241493 429
56 3300028654 Ga0265322_10009325 Ga0265322_100093253 429
57 3300028800 Ga0265338_10009517 Ga0265338_100095177 429
58 3300028800 Ga0265338_10018548 Ga0265338_100185483 429
59 3300031711 Ga0265314_10085496 Ga0265314_100854963 429
60 3300048929 Ga0496126_0118759 Ga0496126_0118759_949_2241 429
61 3300053093 Ga0500651_0000011 Ga0500651_0000011_114428_115720 429
62 3300053093 Ga0500651_0012382 Ga0500651_0012382_1440_2732 429
63 3300053123 Ga0500614_000356 Ga0500614_000356_6840_8132 429
64 3300005327 Ga0070658_10008384 Ga0070658_100083842 430
65 3300005355 Ga0070671_100045362 Ga0070671_1000453622 430
66 3300005458 Ga0070681_10208555 Ga0070681_102085551 430
67 3300005563 Ga0068855_100143460 Ga0068855_1001434602 430
68 3300005577 Ga0068857_100001356 Ga0068857_1000013569 430
69 3300005841 Ga0068863_100033994 Ga0068863_1000339942 430
70 3300005843 Ga0068860_100097724 Ga0068860_1000977242 430
71 3300006042 Ga0075368_10000558 Ga0075368_100005587 430
72 3300006048 Ga0075363_100000211 Ga0075363_10000021115 430
73 3300006186 Ga0075369_10000006 Ga0075369_1000000625 430
74 3300006353 Ga0075370_10004062 Ga0075370_100040627 430
75 3300006844 Ga0075428_100006982 Ga0075428_1000069822 430
76 3300006846 Ga0075430_100019591 Ga0075430_1000195915 430
77 3300009093 Ga0105240_10065081 Ga0105240_100650815 430
78 3300009174 Ga0105241_10099946 Ga0105241_100999462 430
79 3300009174 Ga0105241_10113139 Ga0105241_101131392 430
80 3300009176 Ga0105242_10005812 Ga0105242_100058126 430
81 3300009551 Ga0105238_10120646 Ga0105238_101206462 430
82 3300013296 Ga0157374_10000811 Ga0157374_1000081128 430
83 3300014325 Ga0163163_10012972 Ga0163163_100129729 430
84 3300025904 Ga0207647_10000167 Ga0207647_1000016740 430
85 3300025912 Ga0207707_10007229 Ga0207707_100072297 430
86 3300025913 Ga0207695_10103535 Ga0207695_101035353 430
87 3300025917 Ga0207660_10071264 Ga0207660_100712644 430
88 3300025921 Ga0207652_10006817 Ga0207652_100068172 430
89 3300025931 Ga0207644_10030888 Ga0207644_100308884 430
90 3300025934 Ga0207686_10002757 Ga0207686_100027576 430
91 3300025949 Ga0207667_10033548 Ga0207667_100335485 430
92 3300026041 Ga0207639_10174521 Ga0207639_101745211 430
93 3300026088 Ga0207641_10105338 Ga0207641_101053381 430
94 3300026116 Ga0207674_10000636 Ga0207674_1000063630 430
95 3300027866 Ga0209813_10000003 Ga0209813_1000000338 430
96 3300028556 Ga0265337_1000382 Ga0265337_10003829 430
97 3300028556 Ga0265337_1000604 Ga0265337_100060424 430
98 3300028556 Ga0265337_1004987 Ga0265337_10049876 430
99 3300028558 Ga0265326_10000414 Ga0265326_1000041414 430
100 3300028558 Ga0265326_10001291 Ga0265326_100012919 430
101 3300028558 Ga0265326_10002405 Ga0265326_100024054 430
102 3300028563 Ga0265319_1021515 Ga0265319_10215153 430
103 3300028573 Ga0265334_10000689 Ga0265334_100006899 430
104 3300028573 Ga0265334_10002696 Ga0265334_100026961 430
105 3300028573 Ga0265334_10004397 Ga0265334_100043973 430
106 3300028573 Ga0265334_10004575 Ga0265334_100045756 430
107 3300028577 Ga0265318_10008552 Ga0265318_100085525 430
108 3300028577 Ga0265318_10029392 Ga0265318_100293922 430
109 3300028654 Ga0265322_10002445 Ga0265322_100024455 430
110 3300028654 Ga0265322_10004826 Ga0265322_100048264 430
111 3300028654 Ga0265322_10006031 Ga0265322_100060315 430
112 3300028666 Ga0265336_10000760 Ga0265336_100007606 430
113 3300028666 Ga0265336_10000969 Ga0265336_100009693 430
114 3300028666 Ga0265336_10012749 Ga0265336_100127493 430
115 3300028800 Ga0265338_10000074 Ga0265338_1000007480 430
116 3300028800 Ga0265338_10000758 Ga0265338_1000075830 430
117 3300028800 Ga0265338_10001694 Ga0265338_100016949 430
118 3300028800 Ga0265338_10006928 Ga0265338_100069283 430
119 3300028800 Ga0265338_10178988 Ga0265338_101789882 430
120 3300028800 Ga0265338_10178990 Ga0265338_101789902 430
121 3300031238 Ga0265332_10004508 Ga0265332_100045083 430
122 3300031239 Ga0265328_10008676 Ga0265328_100086763 430
123 3300031241 Ga0265325_10018360 Ga0265325_100183603 430
124 3300031242 Ga0265329_10004450 Ga0265329_100044504 430
125 3300031247 Ga0265340_10026377 Ga0265340_100263773 430
126 3300031249 Ga0265339_10024182 Ga0265339_100241825 430
127 3300031250 Ga0265331_10006425 Ga0265331_100064256 430
128 3300031251 Ga0265327_10006222 Ga0265327_100062229 430
129 3300031595 Ga0265313_10008610 Ga0265313_100086106 430
130 3300031711 Ga0265314_10011514 Ga0265314_100115146 430
131 3300031712 Ga0265342_10005169 Ga0265342_100051699 430
132 3300048915 Ga0496112_0007409 Ga0496112_0007409_2615_3910 430
133 3300050490 nmdc:mga03n38_42_c2 nmdc:mga03n38_42_c2_13620_14918 430
134 3300050494 nmdc:mga06z11_2_c1 nmdc:mga06z11_2_c1_138778_140076 430
135 3300050495 nmdc:mga04h51_3_c1 nmdc:mga04h51_3_c1_176798_178096 430
136 3300050496 nmdc:mga07m45_2284_c1 nmdc:mga07m45_2284_c1_6514_7812 430
137 3300050509 nmdc:mga0qj67_15227_c1 nmdc:mga0qj67_15227_c1_2341_3636 430
138 3300050516 nmdc:mga0sz30_2_c1 nmdc:mga0sz30_2_c1_294473_295768 430
139 3300053087 Ga0500643_000034 Ga0500643_000034_125923_127218 430
140 3300053090 Ga0500646_0000188 Ga0500646_0000188_5109_6407 430
141 3300053092 Ga0500583_0000105 Ga0500583_0000105_33360_34655 430
142 3300053092 Ga0500583_0013743 Ga0500583_0013743_1090_2388 430
143 3300053098 Ga0500650_0000014 Ga0500650_0000014_33699_34997 430
144 3300053103 Ga0500555_000001 Ga0500555_000001_217824_219119 430
145 3300053118 Ga0500594_0000001 Ga0500594_0000001_639121_640419 430
146 3300053130 Ga0500642_0102501 Ga0500642_0102501_16_1311 430
147 3300053142 Ga0500577_0000490 Ga0500577_0000490_3097_4395 430
148 3300053143 Ga0500579_003327 Ga0500579_003327_243_1541 430
149 3300053147 Ga0500589_000003 Ga0500589_000003_209975_211270 430
150 3300053160 Ga0500633_0010924 Ga0500633_0010924_742_2040 430
151 3300001990 JGI24737J22298_10000032 JGI24737J22298_1000003211 431
152 3300002067 JGI24735J21928_10000106 JGI24735J21928_1000010615 431
153 3300005329 Ga0070683_100126984 Ga0070683_1001269841 431
154 3300005329 Ga0070683_100209812 Ga0070683_1002098122 431
155 3300005356 Ga0070674_100006252 Ga0070674_1000062522 431
156 3300005367 Ga0070667_100000001 Ga0070667_100000001233 431
157 3300005466 Ga0070685_10000637 Ga0070685_1000063723 431
158 3300005563 Ga0068855_100000001 Ga0068855_100000001637 431
159 3300005563 Ga0068855_100042320 Ga0068855_1000423202 431
160 3300005614 Ga0068856_100007205 Ga0068856_1000072053 431
161 3300005843 Ga0068860_100048079 Ga0068860_1000480792 431
162 3300006237 Ga0097621_100000031 Ga0097621_10000003141 431
163 3300006358 Ga0068871_100000011 Ga0068871_10000001128 431
164 3300009098 Ga0105245_10000007 Ga0105245_1000000746 431
165 3300009174 Ga0105241_10000009 Ga0105241_1000000926 431
166 3300009986 Ga0105033_100235 Ga0105033_1002356 431
167 3300013105 Ga0157369_10000054 Ga0157369_10000054163 431
168 3300013296 Ga0157374_10000014 Ga0157374_1000001446 431
169 3300025911 Ga0207654_10000002 Ga0207654_10000002250 431
170 3300025927 Ga0207687_10000008 Ga0207687_1000000846 431
171 3300025931 Ga0207644_10000001 Ga0207644_10000001371 431
172 3300025937 Ga0207669_10003223 Ga0207669_100032238 431
173 3300025949 Ga0207667_10000003 Ga0207667_10000003625 431
174 3300025949 Ga0207667_10000554 Ga0207667_1000055415 431
175 3300025986 Ga0207658_10000003 Ga0207658_100000031143 431
176 3300026078 Ga0207702_10002725 Ga0207702_100027252 431
177 3300028379 Ga0268266_10000942 Ga0268266_1000094231 431
178 3300028381 Ga0268264_10043793 Ga0268264_100437935 431
179 3300028573 Ga0265334_10000013 Ga0265334_10000013143 431
180 3300028800 Ga0265338_10000060 Ga0265338_10000060151 431
181 3300031247 Ga0265340_10000138 Ga0265340_100001387 431
182 3300047320 Ga0495672_0000010 Ga0495672_0000010_108820_110121 431
183 3300053079 Ga0500610_0000027 Ga0500610_0000027_17927_19243 431
184 3300053087 Ga0500643_004947 Ga0500643_004947_4421_5719 431
185 3300053088 Ga0500644_0000052 Ga0500644_0000052_4418_5734 431
186 3300053103 Ga0500555_000002 Ga0500555_000002_1069005_1070312 431
187 3300053131 Ga0500652_000009 Ga0500652_000009_72250_73557 431
188 3300053137 Ga0500561_0000002 Ga0500561_0000002_166215_167516 431
189 3300053147 Ga0500589_036462 Ga0500589_036462_183_1481 431

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01225

Mur_ligase

Mur ligase family, catalytic domain

82

191

0.92

PF08245

Mur_ligase_M

Mur ligase middle domain

197

330

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
2f00-assembly1.cif.gz_A escherichia coli murc 0.8361 2 412
3eag-assembly1.cif.gz_B the crystal structure of udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl-meso-diaminopimelate ligase (mpl) from neisseria meningitides 0.8337 2 288
2f00-assembly1.cif.gz_B escherichia coli murc 0.8271 2 417
6cau-assembly1.cif.gz_A udp-n-acetylmuramate--alanine ligase from acinetobacter baumannii ab5075-uw with amppnp 0.8271 2 287
1p3d-assembly2.cif.gz_B crystal structure of udp-n-acetylmuramic acid:l-alanine ligase (murc) in complex with uma and anp. 0.8246 1 426
ID Description Score Start End Superfamily
af_P9WJL7_8_102_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8971 2 97 3.40.50.720
af_Q54HR9_1_452_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.8969 3 35 3.50.50.60
af_P17952_10_107_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8968 2 99 3.40.50.720
af_A4HWA7_1_176_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.8948 2 35 3.50.50.60
af_Q4DRR6_1_276_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.8755 1 35 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A202DUG3-F1-model_v4 UDP-N-acetylmuramate--L-alanine ligase 0.9863 1 428 GO:0005524
GO:0008360
GO:0009252
GO:0016881
GO:0051301
GO:0071555
AF-A0A202DUG3-F1-model_v4 UDP-N-acetylmuramate--L-alanine ligase 0.9817 1 428 GO:0005524
GO:0008360
GO:0009252
GO:0016881
GO:0051301
GO:0071555
AF-A0A817BMS7-F1-model_v4 UDP-N-acetylmuramate--L-alanine ligase 0.975 1 430 GO:0005524
GO:0009058
GO:0016881
AF-A0A817BMS7-F1-model_v4 UDP-N-acetylmuramate--L-alanine ligase 0.9705 1 430 GO:0005524
GO:0009058
GO:0016881
AF-A0A7T9EZQ4-F1-model_v4 deleted 0.9612 1 180

Feature Viewer

pLDDT pTM Quality
91.43 0.89 High
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Predicted Structure (AlphaFold2)

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