F290659

General Info

Members Datasets Scaffolds Average Seq Length
189 125 378 993

Family's Representative Sequence

Representative Sequence 3300005616|Ga0068852_100000505|Ga0068852_1000005059
Length 1026
Sequence MKENALPALSSIMQKLILSVILLSATHFVRAQALQYSDCPGCWNADSLGNHRIVVRCNATGNVARVDIPWRRRDVHPENKKIILNKTTGMINRETGEVLFEPVSGKGLYYIYYMPYRNEGRSNYPKGVYWKPDTTAAAGWLSRAKEAMGKTVKSAATRAVNCKALVEQSIDAFNSFYPMEVIATSKETEAVVNANKGKAFCVFVEDREHSIRMRNDLPYRWIQTGAGLAPQRPERAGGSLSEGPSLDLSEKRSIFPGRTVFRTFGLIMVAKKGEYFAYQLGIYALKDLQDVRVSFSDLTRAAGGKIGTDRISCINTGGIRYDGTPFVKRVDVPAKQVQALWCGVDVPSDAATGDYNGTATVEANGQRQVIHLKVHVESGASTDQPEKMTRLKWLNSTLAQSNDVIAPYTPLVVQGDSLINLLGRQIQVNKQGFPEQIRTFFTPEMTDITTTPNNLLAENIHFHFIRDGKEIRLTPQGVHFTRKEAGTVQWNATSTSEELQMQVSATLEFDGYLDYKVKVTALQDLDLKDITMHIPFQPEKAKYMMGLGLKGGYRPDSTYQWKWDVAHKNQDGAWIGTVNAGLQYSLRDERYVRPLNTNFYLQKPLLLPASWGNEGKGGITVGIKGKSMLVNNFSGARHMKKGDTLYYNFHLLITPFHVLNTDFQWATRFYHRYNNLDTIKATGATVINIHHATPINPWINYPFIEWRKMKSYIDSAHALGLKVKIYNTVRELSDRAYELWALRSLGDEIYSHGPGGGFSWLQEHVGDDYIPAWFVPEIKDAAIINSGMSRWHNYYVEGIYLDDVAFDRVTMKRIKRVLTQDGHPGIIDLHSANQYNPRDGYNNSANLYMEHFPYLNRLWFGEYFDYEKNNPDFFLTEVSGIPFGLMGEMLEGGGNPWRGMVYGMTNRMPWTANADPRPIWKAWDEFGMQGTKMIGYWSPNCPVTTGRADVPVTVWLKKGKALLSLASWAKEDTTVRLQIDWQRLGIDAAHATIKAPEISGFQPGKSFRADEDILVARGKGWLLVVE

Samples

Sample ID Description Type Environment
1 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
5 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
6 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
7 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
8 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
9 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
10 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
11 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
12 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
13 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
22 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
23 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
24 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
25 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
26 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
27 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
28 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
29 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
30 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
31 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
32 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
33 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
34 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
35 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
36 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
37 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
38 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
39 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
40 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
41 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
42 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
43 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
60 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
61 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
62 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
63 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
64 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
65 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
66 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
67 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
68 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
69 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
70 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
71 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
72 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
73 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
74 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
75 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
76 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
77 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
78 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
79 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
80 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
81 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
82 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
83 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
84 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
85 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
86 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
87 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
88 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
89 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
92 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
93 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
94 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
95 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
96 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
97 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
98 2519899754 Flavobacterium sp. F52 Isolate Rhizosphere
99 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
100 2643221725 Flavobacterium sp. Root935 Isolate Unclassified
101 2738541279 Flavobacterium sp. GV069 Isolate Unclassified
102 2738541284 Pedobacter sp. YR016 Isolate Unclassified
103 2738541285 Flavobacterium sp. GV030 Isolate Unclassified
104 2738541302 Pedobacter sp. CF074 Isolate Unclassified
105 2738543007 Flavobacterium sp. GV063 Isolate Unclassified
106 2739367874 Chryseobacterium sp. T16E-39 Isolate Unclassified
107 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
108 2802428842 Flavobacterium sp. S87F.05.LMB.W.Kidney.N Isolate Unclassified
109 2816332280 Flavobacterium johnsoniae GSE09 Isolate Unclassified
110 2818991437 Pedobacter terrae 518 Isolate Unclassified
111 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
112 2884791551 Chitinophaga oryzae 1310 Isolate Unclassified
113 2903895155 Flavobacterium sp. HBTb2-11-1 Isolate Rhizosphere
114 2914759650 Rhizosphaericola mali Isolate Rhizosphere
115 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
116 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
117 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
118 2929150217 Flavobacterium sp. R-74510 Hybrid assembly Isolate Unclassified
119 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
120 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
121 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
122 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere
123 2958458903 Flavobacterium anhuiense RCM74 Isolate Rhizosphere
124 2977268062 Flavobacterium sp. SORGH_AS 622 Isolate Unclassified
125 8055419101 Flavobacterium tyrosinilyticum KCTC 42726 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 85.19
Metatranscriptomes 0
Isolates 14.81

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.94
Nodule 1.06
Rhizoplane 0.53
Rhizosphere 74.6
Stem 0
Stem Tuber 0
Unclassified 1.06

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068852_100000505 3300005616 Bacteria 25668
2 SwRhRL2b_contig_1588780 2162886007 Bacteria 9036
3 JGI24737J22298_10000241 3300001990 Bacteria 18262
4 JGI24735J21928_10000001 3300002067 Bacteria 650042
5 JGI25162J39368_1000130 3300002737 Bacteria 83005
6 rootH1_10040547 3300003316 Bacteria 21914
7 rootH2_10004342 3300003320 Bacteria 44547
8 rootH2_10004521 3300003320 Bacteria 39563
9 rootH2_10014049 3300003320 Bacteria 28938
10 rootH1_10078757 3300003323 Bacteria 3956
11 rootH1_10204589 3300003323 Bacteria 8264
12 JGI25160J50197_1000964 3300003354 Bacteria 15026
13 Ga0065714_10003161 3300005288 Bacteria 18452
14 Ga0065714_10003739 3300005288 Bacteria 7629
15 Ga0065714_10004003 3300005288 Bacteria 10948
16 Ga0065704_10000196 3300005289 Bacteria 186428
17 Ga0070658_10000019 3300005327 Bacteria 194742
18 Ga0070683_100007593 3300005329 Bacteria 9169
19 Ga0070683_100014336 3300005329 Bacteria 6932
20 Ga0070659_100003169 3300005366 Bacteria 11715
21 Ga0070662_100000138 3300005457 Bacteria 41256
22 Ga0070681_10018659 3300005458 Bacteria 6937
23 Ga0070681_10044594 3300005458 Bacteria 4439
24 Ga0070679_100000485 3300005530 Bacteria 34087
25 Ga0070684_100006938 3300005535 Bacteria 8794
26 Ga0070665_100000006 3300005548 Bacteria 718034
27 Ga0070665_100000104 3300005548 Bacteria 158048
28 Ga0068855_100001991 3300005563 Bacteria 25375
29 Ga0068855_100010322 3300005563 Bacteria 11262
30 Ga0068855_100022282 3300005563 Bacteria 7591
31 Ga0068855_100044060 3300005563 Bacteria 5282
32 Ga0068860_100002988 3300005843 Bacteria 17462
33 Ga0075366_10000197 3300006195 Bacteria 26552
34 Ga0075366_10000769 3300006195 Bacteria 15276
35 Ga0099824_1008454 3300006942 Bacteria 13153
36 Ga0099826_10000506 3300006948 Bacteria 19092
37 Ga0105240_10000193 3300009093 Bacteria 124087
38 Ga0105240_10005053 3300009093 Bacteria 19784
39 Ga0105240_10006234 3300009093 Bacteria 17544
40 Ga0105240_10019904 3300009093 Bacteria 8962
41 Ga0105241_10000266 3300009174 Bacteria 38895
42 Ga0105241_10009371 3300009174 Bacteria 7195
43 Ga0105237_10000417 3300009545 Bacteria 60658
44 Ga0105237_10002435 3300009545 Bacteria 23110
45 Ga0105237_10008283 3300009545 Bacteria 11288
46 Ga0105238_10012981 3300009551 Bacteria 8408
47 Ga0105239_10000016 3300010375 Bacteria 293142
48 Ga0105239_10000414 3300010375 Bacteria 62261
49 Ga0105239_10000482 3300010375 Bacteria 58131
50 Ga0105239_10000690 3300010375 Bacteria 48107
51 Ga0105239_10002054 3300010375 Bacteria 26101
52 Ga0105239_10002682 3300010375 Bacteria 22405
53 Ga0157373_10000012 3300013100 Bacteria 188666
54 Ga0157373_10000021 3300013100 Bacteria 165522
55 Ga0157373_10015447 3300013100 Bacteria 5581
56 Ga0157371_10000407 3300013102 Bacteria 53632
57 Ga0157371_10001709 3300013102 Bacteria 22345
58 Ga0157371_10002515 3300013102 Bacteria 17420
59 Ga0157371_10013287 3300013102 Bacteria 6262
60 Ga0157370_10000173 3300013104 Bacteria 80263
61 Ga0157370_10000333 3300013104 Bacteria 59235
62 Ga0157370_10003402 3300013104 Bacteria 18690
63 Ga0157370_10004668 3300013104 Bacteria 15638
64 Ga0157370_10025235 3300013104 Bacteria 5884
65 Ga0157369_10074199 3300013105 Bacteria 3648
66 Ga0157374_10000103 3300013296 Bacteria 78532
67 Ga0157378_10014049 3300013297 Bacteria 7010
68 Ga0163162_10000034 3300013306 Bacteria 149611
69 Ga0163162_10003487 3300013306 Bacteria 15041
70 Ga0157372_10000052 3300013307 Bacteria 135497
71 Ga0157372_10001741 3300013307 Bacteria 23610
72 Ga0157372_10018494 3300013307 Bacteria 7491
73 Ga0157372_10028193 3300013307 Bacteria 6127
74 Ga0157372_10033216 3300013307 Bacteria 5665
75 Ga0182008_10000017 3300014497 Bacteria 235130
76 Ga0182006_1000248 3300015261 Bacteria 50539
77 Ga0182006_1001023 3300015261 Bacteria 18275
78 Ga0182006_1002580 3300015261 Bacteria 9807
79 Ga0209437_100089 3300025233 Bacteria 250476
80 Ga0209026_1001223 3300025250 Bacteria 11808
81 Ga0207426_1000033 3300025302 Bacteria 455976
82 Ga0207426_1000089 3300025302 Bacteria 281224
83 Ga0207647_10010482 3300025904 Bacteria 6545
84 Ga0207705_10000069 3300025909 Bacteria 133094
85 Ga0207705_10009765 3300025909 Bacteria 6984
86 Ga0207654_10000537 3300025911 Bacteria 21711
87 Ga0207654_10012786 3300025911 Bacteria 4307
88 Ga0207707_10021785 3300025912 Bacteria 5601
89 Ga0207695_10000013 3300025913 Bacteria 821265
90 Ga0207695_10000608 3300025913 Bacteria 71944
91 Ga0207671_10001615 3300025914 Bacteria 25649
92 Ga0207671_10004694 3300025914 Bacteria 12914
93 Ga0207671_10006594 3300025914 Bacteria 10304
94 Ga0207671_10011628 3300025914 Bacteria 7143
95 Ga0207660_10011620 3300025917 Bacteria 5740
96 Ga0207657_10042835 3300025919 Bacteria 3991
97 Ga0207652_10001559 3300025921 Bacteria 20159
98 Ga0207652_10015279 3300025921 Bacteria 6232
99 Ga0207690_10007748 3300025932 Bacteria 6374
100 Ga0207706_10000147 3300025933 Bacteria 76792
101 Ga0207661_10006442 3300025944 Bacteria 8300
102 Ga0207667_10004113 3300025949 Bacteria 17874
103 Ga0207667_10015874 3300025949 Bacteria 8530
104 Ga0207667_10079338 3300025949 Unclassified 3403
105 Ga0207667_10081050 3300025949 Bacteria 3362
106 Ga0207698_10023256 3300026142 Bacteria 4326
107 Ga0268266_10000010 3300028379 Bacteria 1030233
108 Ga0268266_10000108 3300028379 Bacteria 171915
109 Ga0268264_10005523 3300028381 Bacteria 10725
110 Ga0307515_10000114 3300028794 Bacteria 194024
111 Ga0307515_10010404 3300028794 Bacteria 17822
112 Ga0307515_10041639 3300028794 Bacteria 7213
113 Ga0265327_10000385 3300031251 Bacteria 83048
114 Ga0307412_10000004 3300031911 Bacteria 544053
115 Ga0307416_100006392 3300032002 Bacteria 7373
116 Ga0307507_10001367 3300033179 Bacteria 54639
117 Ga0307510_10000766 3300033180 Bacteria 33227
118 Ga0395899_0000002 3300037312 Bacteria 1324310
119 Ga0395899_0001694 3300037312 Bacteria 18386
120 Ga0395900_0000226 3300037418 Bacteria 88588
121 Ga0395900_0048637 3300037418 Unclassified 4368
122 Ga0395898_0005714 3300037466 Bacteria 13403
123 Ga0395905_0000068 3300037471 Bacteria 177163
124 Ga0395901_0000271 3300038443 Bacteria 64591
125 Ga0436361_0494231 3300039447 Bacteria 13127
126 Ga0466972_0000245 3300044658 Bacteria 36884
127 Ga0466959_0020731 3300045049 Bacteria 4843
128 Ga0495650_0000216 3300046471 Bacteria 121086
129 Ga0495585_0000103 3300046492 Bacteria 90447
130 Ga0495585_0000156 3300046492 Bacteria 72941
131 Ga0495606_0000263 3300046507 Bacteria 92794
132 Ga0495610_0001350 3300046512 Bacteria 21772
133 Ga0495616_0022358 3300046513 Bacteria 3415
134 Ga0495648_0005521 3300046524 Bacteria 10494
135 Ga0495648_0009558 3300046524 Bacteria 7485
136 Ga0495648_0024047 3300046524 Bacteria 4158
137 Ga0495633_0000044 3300046558 Bacteria 171185
138 Ga0495668_0000012 3300046616 Bacteria 458817
139 Ga0495625_0000125 3300046660 Bacteria 120726
140 Ga0495625_0001792 3300046660 Bacteria 24676
141 Ga0495625_0002398 3300046660 Bacteria 20329
142 Ga0495661_0002107 3300046665 Bacteria 15615
143 Ga0495649_0000044 3300046694 Bacteria 120721
144 Ga0495683_0003512 3300047323 Bacteria 9123
145 Ga0495687_000026 3300047443 Bacteria 301190
146 Ga0495687_003367 3300047443 Bacteria 11667
147 Ga0495686_0000058 3300047472 Bacteria 240089
148 Ga0495686_0000443 3300047472 Bacteria 62754
149 Ga0501032_0000947 3300049569 Bacteria 23434
150 Ga0501036_0009892 3300049572 Bacteria 7852
151 Ga0501046_0005083 3300049580 Bacteria 11795
152 Ga0501047_0005479 3300049581 Bacteria 11944
153 Ga0501044_0003613 3300049823 Bacteria 17398
154 nmdc:mga0k408_11671_c1 3300050493 Bacteria 4788
155 nmdc:mga0k408_152_c1 3300050493 Bacteria 35351
156 nmdc:mga0k408_55_c2 3300050493 Bacteria 31438
157 Ga0500651_0000110 3300053093 Bacteria 50069
158 Ga0500608_000933 3300053122 Bacteria 10489
159 Ga0500618_000001 3300053125 Bacteria 538477
160 Ga0500622_0004614 3300053156 Bacteria 8552
161 Ga0500624_000163 3300053157 Bacteria 27034
162 2520878397 2519899754 Bacteria 5336938
163 2599477216 2599185184 Bacteria 6430550
164 2644685630 2643221725 Bacteria 5087956
165 2738736110 2738541279 Bacteria 6149495
166 2738763649 2738541284 Bacteria 5199923
167 2738768553 2738541285 Bacteria 6150075
168 2738854418 2738541302 Bacteria 5944758
169 2739217692 2738543007 Bacteria 6149845
170 2740057034 2739367874 Bacteria 4872888
171 2776614789 2775506987 Bacteria 5373360
172 2802653340 2802428842 Bacteria 4926114
173 2817415427 2816332280 Bacteria 5109718
174 2819545845 2818991437 Bacteria 5805520
175 2819676756 2818991460 Bacteria 7595395
176 2884796610 2884791551 Bacteria 8511252
177 2903898206 2903895155 Bacteria 5258610
178 2914763558 2914759650 Bacteria 4701441
179 2919438370 2919437846 Bacteria 6199444
180 2928079131 2928078545 Bacteria 6534839
181 2928148500 2928147474 Bacteria 6512076
182 2929152664 2929150217 Bacteria 5462483
183 2929177866 2929177148 Bacteria 7883697
184 2932085796 2932082852 Bacteria 6563563
185 2945980216 2945977869 Bacteria 7777518
186 2946013920 2946013367 Bacteria 7766675
187 2958462563 2958458903 Bacteria 5301041
188 2977269369 2977268062 Bacteria 5243061
189 8055421060 8055419101 Bacteria 5289643
190 Ga0068852_100000505
191 SwRhRL2b_contig_1588780
192 JGI24737J22298_10000241
193 JGI24735J21928_10000001
194 JGI25162J39368_1000130
195 rootH1_10040547
196 rootH2_10004342
197 rootH2_10004521
198 rootH2_10014049
199 rootH1_10078757
200 rootH1_10204589
201 JGI25160J50197_1000964
202 Ga0065714_10003161
203 Ga0065714_10003739
204 Ga0065714_10004003
205 Ga0065704_10000196
206 Ga0070658_10000019
207 Ga0070683_100007593
208 Ga0070683_100014336
209 Ga0070659_100003169
210 Ga0070662_100000138
211 Ga0070681_10018659
212 Ga0070681_10044594
213 Ga0070679_100000485
214 Ga0070684_100006938
215 Ga0070665_100000006
216 Ga0070665_100000104
217 Ga0068855_100001991
218 Ga0068855_100010322
219 Ga0068855_100022282
220 Ga0068855_100044060
221 Ga0068860_100002988
222 Ga0075366_10000197
223 Ga0075366_10000769
224 Ga0099824_1008454
225 Ga0099826_10000506
226 Ga0105240_10000193
227 Ga0105240_10005053
228 Ga0105240_10006234
229 Ga0105240_10019904
230 Ga0105241_10000266
231 Ga0105241_10009371
232 Ga0105237_10000417
233 Ga0105237_10002435
234 Ga0105237_10008283
235 Ga0105238_10012981
236 Ga0105239_10000016
237 Ga0105239_10000414
238 Ga0105239_10000482
239 Ga0105239_10000690
240 Ga0105239_10002054
241 Ga0105239_10002682
242 Ga0157373_10000012
243 Ga0157373_10000021
244 Ga0157373_10015447
245 Ga0157371_10000407
246 Ga0157371_10001709
247 Ga0157371_10002515
248 Ga0157371_10013287
249 Ga0157370_10000173
250 Ga0157370_10000333
251 Ga0157370_10003402
252 Ga0157370_10004668
253 Ga0157370_10025235
254 Ga0157369_10074199
255 Ga0157374_10000103
256 Ga0157378_10014049
257 Ga0163162_10000034
258 Ga0163162_10003487
259 Ga0157372_10000052
260 Ga0157372_10001741
261 Ga0157372_10018494
262 Ga0157372_10028193
263 Ga0157372_10033216
264 Ga0182008_10000017
265 Ga0182006_1000248
266 Ga0182006_1001023
267 Ga0182006_1002580
268 Ga0209437_100089
269 Ga0209026_1001223
270 Ga0207426_1000033
271 Ga0207426_1000089
272 Ga0207647_10010482
273 Ga0207705_10000069
274 Ga0207705_10009765
275 Ga0207654_10000537
276 Ga0207654_10012786
277 Ga0207707_10021785
278 Ga0207695_10000013
279 Ga0207695_10000608
280 Ga0207671_10001615
281 Ga0207671_10004694
282 Ga0207671_10006594
283 Ga0207671_10011628
284 Ga0207660_10011620
285 Ga0207657_10042835
286 Ga0207652_10001559
287 Ga0207652_10015279
288 Ga0207690_10007748
289 Ga0207706_10000147
290 Ga0207661_10006442
291 Ga0207667_10004113
292 Ga0207667_10015874
293 Ga0207667_10079338
294 Ga0207667_10081050
295 Ga0207698_10023256
296 Ga0268266_10000010
297 Ga0268266_10000108
298 Ga0268264_10005523
299 Ga0307515_10000114
300 Ga0307515_10010404
301 Ga0307515_10041639
302 Ga0265327_10000385
303 Ga0307412_10000004
304 Ga0307416_100006392
305 Ga0307507_10001367
306 Ga0307510_10000766
307 Ga0395899_0000002
308 Ga0395899_0001694
309 Ga0395900_0000226
310 Ga0395900_0048637
311 Ga0395898_0005714
312 Ga0395905_0000068
313 Ga0395901_0000271
314 Ga0436361_0494231
315 Ga0466972_0000245
316 Ga0466959_0020731
317 Ga0495650_0000216
318 Ga0495585_0000103
319 Ga0495585_0000156
320 Ga0495606_0000263
321 Ga0495610_0001350
322 Ga0495616_0022358
323 Ga0495648_0005521
324 Ga0495648_0009558
325 Ga0495648_0024047
326 Ga0495633_0000044
327 Ga0495668_0000012
328 Ga0495625_0000125
329 Ga0495625_0001792
330 Ga0495625_0002398
331 Ga0495661_0002107
332 Ga0495649_0000044
333 Ga0495683_0003512
334 Ga0495687_000026
335 Ga0495687_003367
336 Ga0495686_0000058
337 Ga0495686_0000443
338 Ga0501032_0000947
339 Ga0501036_0009892
340 Ga0501046_0005083
341 Ga0501047_0005479
342 Ga0501044_0003613
343 nmdc:mga0k408_11671_c1
344 nmdc:mga0k408_152_c1
345 nmdc:mga0k408_55_c2
346 Ga0500651_0000110
347 Ga0500608_000933
348 Ga0500618_000001
349 Ga0500622_0004614
350 Ga0500624_000163
351 2520878397
352 2599477216
353 2644685630
354 2738736110
355 2738763649
356 2738768553
357 2738854418
358 2739217692
359 2740057034
360 2776614789
361 2802653340
362 2817415427
363 2819545845
364 2819676756
365 2884796610
366 2903898206
367 2914763558
368 2919438370
369 2928079131
370 2928148500
371 2929152664
372 2929177866
373 2932085796
374 2945980216
375 2946013920
376 2958462563
377 2977269369
378 8055421060

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF19543

GH123_N

Glycoside hydrolase 123, N-terminal domain

41

1026

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
4az1-assembly1.cif.gz_A error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.7851 304 327
5fqh-assembly1.cif.gz_A the details of glycolipid glycan hydrolysis by the structural analysis of a family 123 glycoside hydrolase from clostridium perfringens 0.7726 184 333
1x7d-assembly1.cif.gz_B crystal structure analysis of ornithine cyclodeaminase complexed with nad and ornithine to 1.6 angstroms 0.7717 428 477
5fqe-assembly2.cif.gz_B the details of glycolipid glycan hydrolysis by the structural analysis of a family 123 glycoside hydrolase from clostridium perfringens 0.7676 184 333
5fr0-assembly1.cif.gz_A the details of glycolipid glycan hydrolysis by the structural analysis of a family 123 glycoside hydrolase from clostridium perfringens 0.7557 185 333
ID Description Score Start End Superfamily
af_A0A0R4IEX1_1690_1790_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.8133 213 328 2.60.40.10
af_Q3U3D7_90_190_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.7913 213 329 2.60.40.10
af_M9PCI1_695_787_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.7818 218 328 2.40.50.140
af_Q4DIC6_1053_1162_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.7577 212 330 2.60.40.10
af_A0A0R4IEX1_1690_1790_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.7557 213 328 2.60.40.10
ID Description Score Start End GO Terms
AF-A0A2E4DQ27-F1-model_v4 Glycoside hydrolase 123-like N-terminal domain-containing protein 0.9548 886 994
AF-J9CUF0-F1-model_v4 Glycoside hydrolase 123-like N-terminal domain-containing protein 0.9532 918 992
AF-A0A522RCG1-F1-model_v4 Glycoside hydrolase 123-like N-terminal domain-containing protein 0.9459 18 340
AF-A0A519XSV9-F1-model_v4 Glycoside hydrolase 123-like N-terminal domain-containing protein 0.9441 17 297
AF-A0A7C3YKT3-F1-model_v4 Glycoside hydrolase 123-like N-terminal domain-containing protein 0.9413 22 359

Map