F289410

General Info

Members Datasets Scaffolds Average Seq Length
188 149 376 229

Family's Representative Sequence

Representative Sequence 3300014326|Ga0157380_10074373|Ga0157380_100743732
Length 250
Sequence VIPAVLAALMDHAMHITPDSRSRPRVRETGADTRHALRCRRKFLRFFPGGFDDPTYLEWERDYKWQTHERWQQTLGKREFRSLLRQNDHREIAVRAIRVEQQSRHSMIFSFEKMALRDATKSSSGCKAFAEGLYDFLHGSRSLESRFIQWVEVVGGLPRRQTRVLTWPLVTVFGFIAQPETHLFLKPVVTRAAARAYDFDFQYSSRPNWNTYANLLDWGDRIARDQRGLKPRDMIDIQSFIWVQGSDEYS

Samples

Sample ID Description Type Environment
1 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
18 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
19 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
20 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
21 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
22 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
23 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
24 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
25 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
26 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
27 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
32 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
33 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
34 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
35 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
36 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
37 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
39 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
40 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
41 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
44 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
45 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
46 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
47 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
48 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
49 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
50 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
51 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
52 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
53 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
54 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
55 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
56 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
57 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300027360 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 PM (SPAdes) (version 2) Metagenome Rhizosphere
83 3300027462 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes) (version 2) Metagenome Rhizosphere
84 3300027471 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes) (version 2) Metagenome Rhizosphere
85 3300027526 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes) (version 2) Metagenome Rhizosphere
86 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
87 3300027614 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) Metagenome Rhizosphere
88 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
89 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
92 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
93 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
94 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
95 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
96 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
97 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
98 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
99 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
100 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
101 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
102 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
103 3300042011 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z062817_5204 Metagenome Rhizosphere
104 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
105 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
106 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
107 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
108 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
109 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
110 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
111 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
112 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
113 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
114 3300049520 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_B_7_drought Metagenome Rhizosphere
115 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
118 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
122 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
123 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
124 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
125 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
126 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
127 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
128 3300049656 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_B_0_drought Metagenome Rhizosphere
129 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
130 3300049666 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A4_B_2_control Metagenome Rhizosphere
131 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
132 3300049673 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I13_A_3_drought Metagenome Rhizosphere
133 3300049674 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_A_3_drought Metagenome Rhizosphere
134 3300049682 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_B_3_drought Metagenome Rhizosphere
135 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
136 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
137 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
138 3300049706 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_B_2_control Metagenome Rhizosphere
139 3300049708 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D14_A_3_control Metagenome Rhizosphere
140 3300049757 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_B_2_control Metagenome Rhizosphere
141 3300049759 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_A_4_drought Metagenome Rhizosphere
142 3300049762 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E11_A_4_control Metagenome Rhizosphere
143 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
144 3300049765 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_B_4_drought Metagenome Rhizosphere
145 3300049767 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A15_B_4_drought Metagenome Rhizosphere
146 3300049769 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_B_4_drought Metagenome Rhizosphere
147 3300049771 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_B_4_control Metagenome Rhizosphere
148 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.06
Nodule 0
Rhizoplane 2.13
Rhizosphere 93.09
Stem 0
Stem Tuber 0
Unclassified 22.34

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157380_10074373 3300014326 Bacteria 2758
2 LJQas_1000005 3300000549 Bacteria 31908
3 JGI25406J46586_10003474 3300003203 Bacteria 7409
4 Ga0065712_10101528 3300005290 Bacteria 2031
5 Ga0070683_100011438 3300005329 Bacteria 7672
6 Ga0070683_100021736 3300005329 Bacteria 5729
7 Ga0070683_100289865 3300005329 Bacteria 1557
8 Ga0070670_100338869 3300005331 Bacteria 1319
9 Ga0070677_10065666 3300005333 Bacteria 1511
10 Ga0070689_100077228 3300005340 Unclassified 2610
11 Ga0070668_100413200 3300005347 Bacteria 1154
12 Ga0070669_100211954 3300005353 Bacteria 1529
13 Ga0070675_100014637 3300005354 Bacteria 6186
14 Ga0070675_100080137 3300005354 Bacteria 2721
15 Ga0070675_100095550 3300005354 Bacteria 2495
16 Ga0070671_100068853 3300005355 Bacteria 2952
17 Ga0070671_100357918 3300005355 Bacteria 1246
18 Ga0070674_100027099 3300005356 Bacteria 3752
19 Ga0070674_100113845 3300005356 Bacteria 1991
20 Ga0070673_100045178 3300005364 Bacteria 3415
21 Ga0070673_100053791 3300005364 Bacteria 3164
22 Ga0070688_100302193 3300005365 Bacteria 1157
23 Ga0070659_100119032 3300005366 Bacteria 2137
24 Ga0070713_100000354 3300005436 Bacteria 29691
25 Ga0070701_10251493 3300005438 Unclassified 1067
26 Ga0070700_100017275 3300005441 Bacteria 4121
27 Ga0070663_100177268 3300005455 Bacteria 1651
28 Ga0070678_100013132 3300005456 Bacteria 5179
29 Ga0070678_100025822 3300005456 Unclassified 3960
30 Ga0070678_100496029 3300005456 Bacteria 1077
31 Ga0070662_100248736 3300005457 Bacteria 1428
32 Ga0068867_100146352 3300005459 Bacteria 1852
33 Ga0070685_10018552 3300005466 Bacteria 3743
34 Ga0070684_100077919 3300005535 Bacteria 2928
35 Ga0070684_100192419 3300005535 Bacteria 1857
36 Ga0068853_100008984 3300005539 Bacteria 8050
37 Ga0070672_100086779 3300005543 Bacteria 2517
38 Ga0068855_100438704 3300005563 Bacteria 1426
39 Ga0068856_100157998 3300005614 Bacteria 2277
40 Ga0068859_100016374 3300005617 Bacteria 7448
41 Ga0068861_100110946 3300005719 Bacteria 2197
42 Ga0068861_100161419 3300005719 Bacteria 1849
43 Ga0068861_100518347 3300005719 Bacteria 1081
44 Ga0068870_10010341 3300005840 Bacteria 4285
45 Ga0068858_100380272 3300005842 Bacteria 1355
46 Ga0068862_100050668 3300005844 Bacteria 3549
47 Ga0068862_100086194 3300005844 Bacteria 2730
48 Ga0068862_100415618 3300005844 Bacteria 1261
49 Ga0081539_10000117 3300005985 Bacteria 185868
50 Ga0075365_10153418 3300006038 Unclassified 1603
51 Ga0097621_100194036 3300006237 Bacteria 1760
52 Ga0068871_100219076 3300006358 Bacteria 1648
53 Ga0075431_100124001 3300006847 Bacteria 2665
54 Ga0075433_10238858 3300006852 Bacteria 1613
55 Ga0097620_100016373 3300006931 Bacteria 7448
56 Ga0105240_10158626 3300009093 Bacteria 2689
57 Ga0105240_10371643 3300009093 Bacteria 1616
58 Ga0105245_10028506 3300009098 Bacteria 4927
59 Ga0105249_10028309 3300009553 Bacteria 5058
60 Ga0105249_10068731 3300009553 Bacteria 3268
61 Ga0105249_10163105 3300009553 Bacteria 2155
62 Ga0105239_10000944 3300010375 Bacteria 40963
63 Ga0105239_10052973 3300010375 Bacteria 4451
64 Ga0105239_10208383 3300010375 Unclassified 2191
65 Ga0105246_10011481 3300011119 Bacteria 5496
66 Ga0163162_10222148 3300013306 Bacteria 2019
67 Ga0157372_10045638 3300013307 Bacteria 4862
68 Ga0157372_11216460 3300013307 Bacteria 870
69 Ga0157375_11035240 3300013308 Bacteria 959
70 Ga0163163_10035169 3300014325 Bacteria 4858
71 Ga0163163_10348896 3300014325 Bacteria 1536
72 Ga0157380_10305574 3300014326 Bacteria 1467
73 Ga0157377_10059554 3300014745 Unclassified 2177
74 Ga0163161_10234694 3300017792 Bacteria 1424
75 Ga0213874_10002871 3300021377 Bacteria 3758
76 Ga0213876_10002116 3300021384 Bacteria 11748
77 Ga0213876_10091855 3300021384 Bacteria 1608
78 Ga0213875_10033316 3300021388 Bacteria 2433
79 Ga0209233_1003371 3300025261 Bacteria 5642
80 Ga0207682_10004656 3300025893 Bacteria 5700
81 Ga0207682_10031827 3300025893 Bacteria 2119
82 Ga0207682_10077156 3300025893 Bacteria 1421
83 Ga0207680_10171405 3300025903 Unclassified 1462
84 Ga0207645_10064723 3300025907 Bacteria 2336
85 Ga0207695_10255521 3300025913 Bacteria 1651
86 Ga0207695_10291166 3300025913 Bacteria 1525
87 Ga0207695_10518140 3300025913 Bacteria 1074
88 Ga0207671_10167186 3300025914 Bacteria 1706
89 Ga0207649_10511349 3300025920 Bacteria 914
90 Ga0207681_10064308 3300025923 Bacteria 2533
91 Ga0207659_10025093 3300025926 Unclassified 4000
92 Ga0207687_10030583 3300025927 Bacteria 3631
93 Ga0207700_10000042 3300025928 Bacteria 95374
94 Ga0207706_10450225 3300025933 Bacteria 1114
95 Ga0207704_10558467 3300025938 Bacteria 931
96 Ga0207691_10006675 3300025940 Bacteria 11133
97 Ga0207691_10043973 3300025940 Bacteria 4113
98 Ga0207689_10525126 3300025942 Bacteria 993
99 Ga0207661_10136133 3300025944 Unclassified 2110
100 Ga0207651_10072442 3300025960 Unclassified 2446
101 Ga0207651_10088943 3300025960 Bacteria 2253
102 Ga0207712_10030156 3300025961 Unclassified 3644
103 Ga0207668_10399018 3300025972 Bacteria 1162
104 Ga0207703_10309713 3300026035 Bacteria 1443
105 Ga0207639_10009320 3300026041 Bacteria 6768
106 Ga0207708_10026154 3300026075 Bacteria 4415
107 Ga0207648_10706953 3300026089 Bacteria 934
108 Ga0207675_100188064 3300026118 Bacteria 1980
109 Ga0207683_10006218 3300026121 Bacteria 10235
110 Ga0207683_10006907 3300026121 Bacteria 9716
111 Ga0207683_10817532 3300026121 Bacteria 865
112 Ga0207698_10077993 3300026142 Bacteria 2658
113 Ga0209969_1000530 3300027360 Bacteria 5174
114 Ga0210000_1005231 3300027462 Bacteria 1881
115 Ga0209995_1000495 3300027471 Bacteria 6031
116 Ga0209968_1006676 3300027526 Bacteria 1740
117 Ga0209999_1001175 3300027543 Bacteria 4473
118 Ga0209970_1005720 3300027614 Bacteria 2047
119 Ga0209966_1000786 3300027695 Bacteria 6377
120 Ga0209998_10000026 3300027717 Bacteria 60645
121 Ga0209998_10018100 3300027717 Bacteria 1494
122 Ga0268265_10072820 3300028380 Bacteria 2681
123 Ga0268265_10150068 3300028380 Bacteria 1965
124 Ga0307413_10058027 3300031824 Unclassified 2370
125 Ga0307410_10244858 3300031852 Unclassified 1391
126 Ga0307407_10436591 3300031903 Unclassified 947
127 Ga0307409_100011841 3300031995 Bacteria 5524
128 Ga0307409_100174012 3300031995 Unclassified 1898
129 Ga0307409_100814803 3300031995 Bacteria 942
130 Ga0307409_100967763 3300031995 Bacteria 868
131 Ga0307416_100095606 3300032002 Unclassified 2566
132 Ga0307414_10063392 3300032004 Unclassified 2627
133 Ga0307415_100057999 3300032126 Bacteria 2664
134 Ga0373961_0049384 3300035241 Unclassified 1243
135 Ga0373947_0055015 3300035725 Unclassified 2403
136 Ga0436365_0220588 3300039437 Bacteria 103839
137 Ga0436365_1291335 3300039437 Bacteria 3265
138 Ga0436363_0073272 3300039450 Bacteria 11903
139 Ga0436362_0969138 3300039453 Bacteria 3273
140 Ga0439454_029151 3300042011 Bacteria 857
141 Ga0466972_0176327 3300044658 Bacteria 1003
142 Ga0466961_0093273 3300044693 Unclassified 1900
143 Ga0466970_0012797 3300044765 Bacteria 4295
144 Ga0451576_0440060 3300045051 Bacteria 1368
145 Ga0495645_0436887 3300046543 Bacteria 828
146 Ga0496109_0032090 3300048912 Bacteria 4718
147 Ga0496110_0528537 3300048913 Unclassified 1073
148 Ga0496112_0005678 3300048915 Bacteria 10839
149 Ga0496113_0081087 3300048916 Bacteria 2486
150 Ga0501292_009363 3300049515 Unclassified 1453
151 Ga0501297_007592 3300049520 Bacteria 1182
152 Ga0501033_0035549 3300049570 Bacteria 3735
153 Ga0501033_0295851 3300049570 Unclassified 1141
154 Ga0501034_0005275 3300049571 Bacteria 14174
155 Ga0501036_0073442 3300049572 Bacteria 2892
156 Ga0501042_0025713 3300049578 Bacteria 4137
157 Ga0501046_0064272 3300049580 Archaea 2865
158 Ga0501047_0472418 3300049581 Unclassified 1082
159 Ga0501047_0558090 3300049581 Unclassified 969
160 Ga0501069_0184722 3300049585 Unclassified 1206
161 Ga0501071_0171224 3300049587 Unclassified 1625
162 Ga0501072_0069859 3300049588 Bacteria 2773
163 Ga0501073_0015255 3300049589 Bacteria 5574
164 Ga0501074_0067831 3300049590 Bacteria 2565
165 Ga0501075_0024348 3300049591 Bacteria 4438
166 Ga0501076_0163972 3300049592 Bacteria 1811
167 Ga0501209_028623 3300049656 Unclassified 1395
168 Ga0501224_001000 3300049664 Unclassified 3664
169 Ga0501228_009312 3300049666 Bacteria 957
170 Ga0501235_001533 3300049669 Unclassified 4954
171 Ga0501240_001661 3300049673 Bacteria 2219
172 Ga0501242_004565 3300049674 Unclassified 1538
173 Ga0501252_000323 3300049682 Unclassified 3435
174 Ga0501257_005147 3300049686 Unclassified 2877
175 Ga0501221_000328 3300049704 Bacteria 7218
176 Ga0501225_0000517 3300049705 Bacteria 12043
177 Ga0501229_004631 3300049706 Unclassified 1673
178 Ga0501245_002014 3300049708 Unclassified 2688
179 Ga0501232_003342 3300049757 Unclassified 1460
180 Ga0501262_008491 3300049759 Unclassified 1258
181 Ga0501265_007615 3300049762 Unclassified 1278
182 Ga0501266_004740 3300049763 Unclassified 1690
183 Ga0501268_000411 3300049765 Bacteria 4591
184 Ga0501270_001851 3300049767 Unclassified 2096
185 Ga0501272_014854 3300049769 Bacteria 902
186 Ga0501274_001079 3300049771 Unclassified 2042
187 Ga0501035_0249786 3300049822 Unclassified 1506
188 Ga0501044_0230605 3300049823 Bacteria 1799
189 Ga0157380_10074373
190 LJQas_1000005
191 JGI25406J46586_10003474
192 Ga0065712_10101528
193 Ga0070683_100011438
194 Ga0070683_100021736
195 Ga0070683_100289865
196 Ga0070670_100338869
197 Ga0070677_10065666
198 Ga0070689_100077228
199 Ga0070668_100413200
200 Ga0070669_100211954
201 Ga0070675_100014637
202 Ga0070675_100080137
203 Ga0070675_100095550
204 Ga0070671_100068853
205 Ga0070671_100357918
206 Ga0070674_100027099
207 Ga0070674_100113845
208 Ga0070673_100045178
209 Ga0070673_100053791
210 Ga0070688_100302193
211 Ga0070659_100119032
212 Ga0070713_100000354
213 Ga0070701_10251493
214 Ga0070700_100017275
215 Ga0070663_100177268
216 Ga0070678_100013132
217 Ga0070678_100025822
218 Ga0070678_100496029
219 Ga0070662_100248736
220 Ga0068867_100146352
221 Ga0070685_10018552
222 Ga0070684_100077919
223 Ga0070684_100192419
224 Ga0068853_100008984
225 Ga0070672_100086779
226 Ga0068855_100438704
227 Ga0068856_100157998
228 Ga0068859_100016374
229 Ga0068861_100110946
230 Ga0068861_100161419
231 Ga0068861_100518347
232 Ga0068870_10010341
233 Ga0068858_100380272
234 Ga0068862_100050668
235 Ga0068862_100086194
236 Ga0068862_100415618
237 Ga0081539_10000117
238 Ga0075365_10153418
239 Ga0097621_100194036
240 Ga0068871_100219076
241 Ga0075431_100124001
242 Ga0075433_10238858
243 Ga0097620_100016373
244 Ga0105240_10158626
245 Ga0105240_10371643
246 Ga0105245_10028506
247 Ga0105249_10028309
248 Ga0105249_10068731
249 Ga0105249_10163105
250 Ga0105239_10000944
251 Ga0105239_10052973
252 Ga0105239_10208383
253 Ga0105246_10011481
254 Ga0163162_10222148
255 Ga0157372_10045638
256 Ga0157372_11216460
257 Ga0157375_11035240
258 Ga0163163_10035169
259 Ga0163163_10348896
260 Ga0157380_10305574
261 Ga0157377_10059554
262 Ga0163161_10234694
263 Ga0213874_10002871
264 Ga0213876_10002116
265 Ga0213876_10091855
266 Ga0213875_10033316
267 Ga0209233_1003371
268 Ga0207682_10004656
269 Ga0207682_10031827
270 Ga0207682_10077156
271 Ga0207680_10171405
272 Ga0207645_10064723
273 Ga0207695_10255521
274 Ga0207695_10291166
275 Ga0207695_10518140
276 Ga0207671_10167186
277 Ga0207649_10511349
278 Ga0207681_10064308
279 Ga0207659_10025093
280 Ga0207687_10030583
281 Ga0207700_10000042
282 Ga0207706_10450225
283 Ga0207704_10558467
284 Ga0207691_10006675
285 Ga0207691_10043973
286 Ga0207689_10525126
287 Ga0207661_10136133
288 Ga0207651_10072442
289 Ga0207651_10088943
290 Ga0207712_10030156
291 Ga0207668_10399018
292 Ga0207703_10309713
293 Ga0207639_10009320
294 Ga0207708_10026154
295 Ga0207648_10706953
296 Ga0207675_100188064
297 Ga0207683_10006218
298 Ga0207683_10006907
299 Ga0207683_10817532
300 Ga0207698_10077993
301 Ga0209969_1000530
302 Ga0210000_1005231
303 Ga0209995_1000495
304 Ga0209968_1006676
305 Ga0209999_1001175
306 Ga0209970_1005720
307 Ga0209966_1000786
308 Ga0209998_10000026
309 Ga0209998_10018100
310 Ga0268265_10072820
311 Ga0268265_10150068
312 Ga0307413_10058027
313 Ga0307410_10244858
314 Ga0307407_10436591
315 Ga0307409_100011841
316 Ga0307409_100174012
317 Ga0307409_100814803
318 Ga0307409_100967763
319 Ga0307416_100095606
320 Ga0307414_10063392
321 Ga0307415_100057999
322 Ga0373961_0049384
323 Ga0373947_0055015
324 Ga0436365_0220588
325 Ga0436365_1291335
326 Ga0436363_0073272
327 Ga0436362_0969138
328 Ga0439454_029151
329 Ga0466972_0176327
330 Ga0466961_0093273
331 Ga0466970_0012797
332 Ga0451576_0440060
333 Ga0495645_0436887
334 Ga0496109_0032090
335 Ga0496110_0528537
336 Ga0496112_0005678
337 Ga0496113_0081087
338 Ga0501292_009363
339 Ga0501297_007592
340 Ga0501033_0035549
341 Ga0501033_0295851
342 Ga0501034_0005275
343 Ga0501036_0073442
344 Ga0501042_0025713
345 Ga0501046_0064272
346 Ga0501047_0472418
347 Ga0501047_0558090
348 Ga0501069_0184722
349 Ga0501071_0171224
350 Ga0501072_0069859
351 Ga0501073_0015255
352 Ga0501074_0067831
353 Ga0501075_0024348
354 Ga0501076_0163972
355 Ga0501209_028623
356 Ga0501224_001000
357 Ga0501228_009312
358 Ga0501235_001533
359 Ga0501240_001661
360 Ga0501242_004565
361 Ga0501252_000323
362 Ga0501257_005147
363 Ga0501221_000328
364 Ga0501225_0000517
365 Ga0501229_004631
366 Ga0501245_002014
367 Ga0501232_003342
368 Ga0501262_008491
369 Ga0501265_007615
370 Ga0501266_004740
371 Ga0501268_000411
372 Ga0501270_001851
373 Ga0501272_014854
374 Ga0501274_001079
375 Ga0501035_0249786
376 Ga0501044_0230605

MSA Aligner

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Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
3knt-assembly1.cif.gz_A crystal structure of methanocaldococcus jannaschii 8-oxoguanine glycosylase/lyase in complex with 15mer dna containing 8-oxoguanine 0.499 41 220
3knt-assembly1.cif.gz_A crystal structure of methanocaldococcus jannaschii 8-oxoguanine glycosylase/lyase in complex with 15mer dna containing 8-oxoguanine 0.4458 41 220
7az0-assembly1.cif.gz_CCC structure of the mouse 8-oxoguanine dna glycosylase mogg1 in complex with th12161 0.4455 85 220
7z5b-assembly2.cif.gz_B structure of the mouse 8-oxoguanine dna glycosylase mogg1 in complex with ligand th013546 0.4197 85 215
7ayz-assembly1.cif.gz_CCC structure of the mouse 8-oxoguanine dna glycosylase mogg1 in complex with activator th10785 0.4139 68 215
ID Description Score Start End Superfamily
3kntA01 Mainly Alpha;Orthogonal Bundle;Endonuclease Iii, domain 2;Helix-hairpin-Helix base-excision DNA repair enzymes (C-terminal) 0.6844 156 220 1.10.1670.10
2nozA02 Mainly Alpha;Orthogonal Bundle;Endonuclease Iii, domain 2;Helix-hairpin-Helix base-excision DNA repair enzymes (C-terminal) 0.4977 156 201 1.10.1670.10
3kntA01 Mainly Alpha;Orthogonal Bundle;Endonuclease Iii, domain 2;Helix-hairpin-Helix base-excision DNA repair enzymes (C-terminal) 0.4699 156 220 1.10.1670.10
af_Q4CZU5_374_476_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.3493 8 126 1.25.40.10
2nozA02 Mainly Alpha;Orthogonal Bundle;Endonuclease Iii, domain 2;Helix-hairpin-Helix base-excision DNA repair enzymes (C-terminal) 0.3449 156 201 1.10.1670.10
ID Description Score Start End GO Terms
AF-A0A7V9NLD1-F1-model_v4 Uncharacterized protein 0.999 8 222
AF-A0A2V7RGD0-F1-model_v4 Uncharacterized protein 0.9977 5 222
AF-A0A7V9UQP9-F1-model_v4 Uncharacterized protein 0.9969 6 222
AF-A0A838TD79-F1-model_v4 Uncharacterized protein 0.9944 162 222
AF-A0A849K8G9-F1-model_v4 Uncharacterized protein 0.9932 17 222

Map