F289166

General Info

Members Datasets Scaffolds Average Seq Length
188 142 182 352

Family's Representative Sequence

Representative Sequence 3300006847|Ga0075431_100010439|Ga0075431_1000104394
Length 376
Sequence MESLSSRDAHRIAHASERMLRAMAPPWLLYGANGYTGELIARRAVAAGERPVLGGRSAASVGRLAGELGLEQRVFALDDPAAVDRGLEGMKAVLHCAGPFSRTAGPMAEGCLRARAHYLDITGEIEVFEGMAARGAAALRAGVTLLPGVGFDVVPSDGLAAHLHGRLPSATHLALGFQGSGRLSRGTATTMVENLHRGGAVRREGRIVRVPAAWRTRVIDFGAGPVAAITIPWGDVATAYHTTGIPNIEVYTVVPRTTRLLFKAARPLAPLLATGPVQSLLKRRIQSGPPGPSAAHRARARSLLWGEARDTSQVVVSRLDTLEGYELTSRTALLALQCVVAGGVGAGFQTPSRAFGADFVLAVESTVRRDDPPRPV

Samples

Sample ID Description Type Environment
1 2508501009 Bradyrhizobium sp. WSM471 Isolate Nodule
2 2643221695 Lysobacter sp. Root494 Isolate Unclassified
3 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
4 2881714928 Pseudidiomarina mangrovi ZQ330 Isolate Rhizosphere
5 2913844669 Nostocales cyanobacterium LEGE 12452 Isolate Unclassified
6 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
7 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
13 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
16 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
17 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
18 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
23 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
24 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
25 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
26 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
27 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
28 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
31 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
32 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
33 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
34 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
35 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
36 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
37 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
38 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
39 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
40 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
42 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
43 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
44 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
45 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
46 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
47 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
49 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
50 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
52 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
54 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
55 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
56 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
57 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
58 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
59 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
60 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
61 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
62 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
63 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
64 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
91 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
94 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
95 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
96 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
97 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
98 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
99 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
100 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
101 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
102 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
103 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
104 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
105 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
106 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
107 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
108 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
109 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
110 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
111 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
112 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
113 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
114 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
115 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
116 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
117 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
118 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
119 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
120 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
121 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
122 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
123 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
124 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
125 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
126 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
127 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
128 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
129 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
130 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
131 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
132 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
133 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
134 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
135 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
136 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
137 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
138 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
139 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
140 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
141 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
142 8054357960 Idiomarina rhizosphaerae M1R2S28 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.81
Metatranscriptomes 0
Isolates 3.19

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0.53
Rhizoplane 1.6
Rhizosphere 95.74
Stem 0
Stem Tuber 0
Unclassified 2.13

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25404J52841_10001350 3300003659 Bacteria 4280
2 Ga0070676_10003527 3300005328 Bacteria 8178
3 Ga0068868_100024346 3300005338 Bacteria 4594
4 Ga0070689_100018060 3300005340 Bacteria 5189
5 Ga0070689_100054105 3300005340 Bacteria 3107
6 Ga0070687_100001445 3300005343 Bacteria 8357
7 Ga0070687_100133340 3300005343 Bacteria 1437
8 Ga0070668_100016565 3300005347 Bacteria 5509
9 Ga0070668_100300763 3300005347 Archaea 1345
10 Ga0070669_100021076 3300005353 Bacteria 4657
11 Ga0070674_100000909 3300005356 Bacteria 15450
12 Ga0070674_100006770 3300005356 Bacteria 6711
13 Ga0070673_100035705 3300005364 Bacteria 3771
14 Ga0070701_10002691 3300005438 Bacteria 6891
15 Ga0070700_100006978 3300005441 Bacteria 6065
16 Ga0070700_100025534 3300005441 Bacteria 3479
17 Ga0070708_100077069 3300005445 Bacteria 3012
18 Ga0070663_100015954 3300005455 Unclassified 4864
19 Ga0070678_100014610 3300005456 Bacteria 4962
20 Ga0070662_100000427 3300005457 Bacteria 24940
21 Ga0070681_10230292 3300005458 Unclassified 1767
22 Ga0068867_100041519 3300005459 Bacteria 3361
23 Ga0070706_100022554 3300005467 Bacteria 5796
24 Ga0070699_100000085 3300005518 Bacteria 88765
25 Ga0070699_100110641 3300005518 Bacteria 2411
26 Ga0070684_100269975 3300005535 Bacteria 1557
27 Ga0068853_100142281 3300005539 Unclassified 2154
28 Ga0070672_100009789 3300005543 Bacteria 6622
29 Ga0070672_100031091 3300005543 Bacteria 4016
30 Ga0070672_100051397 3300005543 Bacteria 3214
31 Ga0070686_100000038 3300005544 Bacteria 105132
32 Ga0070686_100037946 3300005544 Bacteria 2992
33 Ga0070665_100232156 3300005548 Archaea 1845
34 Ga0070665_100340618 3300005548 Bacteria 1504
35 Ga0070702_100038278 3300005615 Archaea 2670
36 Ga0068859_100055344 3300005617 Bacteria 3992
37 Ga0068864_100122064 3300005618 Archaea 2331
38 Ga0068864_100156404 3300005618 Bacteria 2069
39 Ga0068866_10051448 3300005718 Unclassified 2097
40 Ga0068861_100017664 3300005719 Bacteria 5069
41 Ga0068870_10066358 3300005840 Unclassified 1954
42 Ga0068870_10102644 3300005840 Archaea 1619
43 Ga0068858_100033401 3300005842 Bacteria 4775
44 Ga0068860_100024586 3300005843 Bacteria 5818
45 Ga0068860_100045427 3300005843 Unclassified 4188
46 Ga0068862_100297772 3300005844 Bacteria 1483
47 Ga0081539_10010038 3300005985 Bacteria 7789
48 Ga0081539_10021903 3300005985 Bacteria 4248
49 Ga0097621_100251620 3300006237 Bacteria 1547
50 Ga0075428_100158730 3300006844 Bacteria 2455
51 Ga0075431_100010439 3300006847 Bacteria 9337
52 Ga0075431_100056581 3300006847 Bacteria 4044
53 Ga0075433_10020196 3300006852 Bacteria 5565
54 Ga0075434_100141110 3300006871 Bacteria 2429
55 Ga0075429_100353336 3300006880 Bacteria 1287
56 Ga0068865_100003278 3300006881 Bacteria 9689
57 Ga0068865_100004510 3300006881 Bacteria 8402
58 Ga0097620_100055347 3300006931 Bacteria 3992
59 Ga0075435_100134575 3300007076 Bacteria 2069
60 Ga0105240_10058720 3300009093 Bacteria 4802
61 Ga0111539_10007847 3300009094 Bacteria 13632
62 Ga0111539_10056869 3300009094 Bacteria 4648
63 Ga0111539_10390028 3300009094 Bacteria 1622
64 Ga0105245_10005100 3300009098 Bacteria 11549
65 Ga0114129_10176757 3300009147 Bacteria 2908
66 Ga0105243_10044301 3300009148 Bacteria 3491
67 Ga0105243_10085082 3300009148 Archaea 2591
68 Ga0105248_10017761 3300009177 Bacteria 7848
69 Ga0105237_10024294 3300009545 Bacteria 6201
70 Ga0105249_10018362 3300009553 Bacteria 6220
71 Ga0099796_10034666 3300010159 Unclassified 1669
72 Ga0105239_10008488 3300010375 Bacteria 11680
73 Ga0157378_10044470 3300013297 Bacteria 3944
74 Ga0163162_10147697 3300013306 Bacteria 2468
75 Ga0157372_10476555 3300013307 Bacteria 1455
76 Ga0157380_10185056 3300014326 Archaea 1834
77 Ga0157376_10336046 3300014969 Bacteria 1441
78 Ga0207682_10056624 3300025893 Bacteria 1633
79 Ga0207680_10155687 3300025903 Bacteria 1528
80 Ga0207643_10031826 3300025908 Bacteria 2942
81 Ga0207707_10008904 3300025912 Bacteria 8716
82 Ga0207693_10091661 3300025915 Bacteria 2383
83 Ga0207693_10190065 3300025915 Bacteria 1616
84 Ga0207662_10009857 3300025918 Archaea 5270
85 Ga0207652_10266881 3300025921 Bacteria 1544
86 Ga0207681_10000891 3300025923 Bacteria 19510
87 Ga0207681_10291085 3300025923 Unclassified 1289
88 Ga0207650_10036725 3300025925 Bacteria 3566
89 Ga0207659_10020631 3300025926 Bacteria 4359
90 Ga0207659_10301708 3300025926 Archaea 1316
91 Ga0207687_10005873 3300025927 Bacteria 8117
92 Ga0207706_10000241 3300025933 Bacteria 60341
93 Ga0207709_10025851 3300025935 Bacteria 3365
94 Ga0207709_10062055 3300025935 Archaea 2338
95 Ga0207704_10003634 3300025938 Bacteria 7003
96 Ga0207704_10006500 3300025938 Bacteria 5455
97 Ga0207691_10068504 3300025940 Bacteria 3206
98 Ga0207651_10221330 3300025960 Archaea 1530
99 Ga0207712_10041986 3300025961 Archaea 3147
100 Ga0207712_10082789 3300025961 Bacteria 2340
101 Ga0207668_10065874 3300025972 Bacteria 2565
102 Ga0207658_10007913 3300025986 Bacteria 7241
103 Ga0207678_10014202 3300026067 Bacteria 7001
104 Ga0207708_10001140 3300026075 Bacteria 19958
105 Ga0207708_10012120 3300026075 Bacteria 6428
106 Ga0207648_10001392 3300026089 Bacteria 26624
107 Ga0207648_10005717 3300026089 Bacteria 12458
108 Ga0207676_10075270 3300026095 Archaea 2723
109 Ga0207675_100004957 3300026118 Bacteria 12832
110 Ga0207675_100011611 3300026118 Bacteria 8235
111 Ga0207683_10002272 3300026121 Bacteria 16843
112 Ga0207698_10050012 3300026142 Bacteria 3186
113 Ga0207698_10400866 3300026142 Archaea 1311
114 Ga0207428_10015529 3300027907 Bacteria 6584
115 Ga0207428_10053663 3300027907 Bacteria 3213
116 Ga0207428_10057521 3300027907 Bacteria 3087
117 Ga0268265_10279181 3300028380 Bacteria 1494
118 Ga0268264_10025545 3300028381 Bacteria 4826
119 Ga0268264_10131231 3300028381 Archaea 2221
120 Ga0265337_1000707 3300028556 Bacteria 17564
121 Ga0265320_10000101 3300031240 Bacteria 73166
122 Ga0316575_10056598 3300031665 Unclassified 1562
123 Ga0265314_10007945 3300031711 Bacteria 9152
124 Ga0316576_10003755 3300031727 Bacteria 8968
125 Ga0316576_10076235 3300031727 Bacteria 2481
126 Ga0307405_10189792 3300031731 Bacteria 1483
127 Ga0307416_100062479 3300032002 Bacteria 3046
128 Ga0307415_100254339 3300032126 Bacteria 1429
129 Ga0373943_0050033 3300035170 Bacteria 2053
130 Ga0373943_0157613 3300035170 Unclassified 1234
131 Ga0316574_0102155 3300035398 Bacteria 1835
132 Ga0373931_0097835 3300035691 Bacteria 1646
133 Ga0373927_0022337 3300035695 Bacteria 4145
134 Ga0373925_0021405 3300037068 Bacteria 4711
135 Ga0395898_0284936 3300037466 Bacteria 1576
136 Ga0395905_0001853 3300037471 Bacteria 24358
137 Ga0395905_0284140 3300037471 Bacteria 1541
138 Ga0436364_1216541 3300037853 Bacteria 3109
139 Ga0436360_1037159 3300039438 Bacteria 5323
140 Ga0436361_0616304 3300039447 Bacteria 4398
141 Ga0436361_1180737 3300039447 Unclassified 1261
142 Ga0439432_016270 3300042006 Bacteria 2505
143 Ga0451577_0003423 3300042876 Bacteria 17680
144 Ga0451577_0013584 3300042876 Bacteria 7615
145 Ga0451577_0013856 3300042876 Bacteria 7531
146 Ga0451577_0034111 3300042876 Bacteria 4589
147 Ga0451577_0209837 3300042876 Bacteria 1759
148 Ga0451577_0355731 3300042876 Bacteria 1328
149 Ga0466963_0195007 3300044694 Bacteria 1416
150 Ga0453684_0000368 3300044712 Bacteria 185018
151 Ga0453684_0048326 3300044712 Bacteria 5629
152 Ga0466967_0018484 3300045976 Bacteria 5573
153 Ga0495608_0000989 3300046511 Bacteria 20058
154 Ga0495587_0154744 3300046536 Bacteria 1306
155 Ga0495667_0172018 3300046559 Unclassified 1392
156 Ga0495634_0045090 3300046642 Bacteria 2982
157 Ga0495669_0108345 3300046684 Bacteria 1295
158 Ga0495604_0027231 3300047317 Bacteria 4548
159 Ga0495636_0010819 3300047318 Bacteria 3607
160 Ga0495680_0127607 3300047322 Unclassified 1872
161 Ga0495675_0062707 3300047444 Bacteria 2353
162 Ga0495684_0080367 3300047471 Bacteria 2475
163 Ga0496109_0134089 3300048912 Unclassified 2313
164 Ga0496110_0014114 3300048913 Bacteria 6623
165 Ga0496115_0000002 3300048918 Bacteria 365286
166 Ga0496126_0000052 3300048929 Bacteria 312383
167 Ga0501073_0091846 3300049589 Bacteria 2110
168 Ga0501075_0286860 3300049591 Unclassified 1254
169 Ga0501257_009187 3300049686 Bacteria 2230
170 nmdc:mga05p37_81709_c1 3300050507 Unclassified 3981
171 nmdc:mga06r32_328223_c1 3300050510 Bacteria 1515
172 nmdc:mga08y16_22927_c1 3300050511 Bacteria 6590
173 nmdc:mga08y16_2483_c1 3300050511 Bacteria 10678
174 nmdc:mga08y16_2704_c1 3300050511 Bacteria 18199
175 nmdc:mga0n895_99662_c1 3300050512 Bacteria 2914
176 nmdc:mga0rr50_508447_c1 3300050513 Bacteria 1025
177 nmdc:mga0a205_36109_c1 3300050515 Bacteria 4748
178 Ga0495601_0000909 3300053077 Bacteria 16110
179 Ga0495601_0043524 3300053077 Bacteria 2820
180 Ga0495601_0081287 3300053077 Unclassified 2079
181 Ga0495595_0045600 3300053084 Bacteria 2017
182 Ga0495619_0164072 3300053085 Bacteria 1535

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300039447 Ga0436361_1180737 Ga0436361_1180737_261_1244 315
2 3300042006 Ga0439432_016270 Ga0439432_016270_870_1919 317
3 3300035170 Ga0373943_0050033 Ga0373943_0050033_413_1471 321
4 3300050513 nmdc:mga0rr50_508447_c1 nmdc:mga0rr50_508447_c1_28_1002 321
5 3300005543 Ga0070672_100051397 Ga0070672_1000513972 323
6 3300005548 Ga0070665_100340618 Ga0070665_1003406183 323
7 3300025926 Ga0207659_10020631 Ga0207659_100206313 323
8 3300025940 Ga0207691_10068504 Ga0207691_100685043 323
9 3300009147 Ga0114129_10176757 Ga0114129_101767573 324
10 3300006847 Ga0075431_100056581 Ga0075431_1000565812 325
11 3300050510 nmdc:mga06r32_328223_c1 nmdc:mga06r32_328223_c1_213_1283 325
12 3300014969 Ga0157376_10336046 Ga0157376_103360462 328
13 3300050515 nmdc:mga0a205_36109_c1 nmdc:mga0a205_36109_c1_3284_4378 331
14 3300025925 Ga0207650_10036725 Ga0207650_100367253 332
15 3300053077 Ga0495601_0081287 Ga0495601_0081287_1038_2048 333
16 3300005985 Ga0081539_10010038 Ga0081539_100100389 338
17 3300037466 Ga0395898_0284936 Ga0395898_0284936_422_1438 338
18 3300037471 Ga0395905_0284140 Ga0395905_0284140_122_1138 338
19 3300045976 Ga0466967_0018484 Ga0466967_0018484_1508_2524 338
20 3300031727 Ga0316576_10003755 Ga0316576_100037557 339
21 iso_pu_bacteria 2881714928 2881717192 339
22 3300005985 Ga0081539_10021903 Ga0081539_100219035 340
23 3300031665 Ga0316575_10056598 Ga0316575_100565982 341
24 3300035398 Ga0316574_0102155 Ga0316574_0102155_119_1177 341
25 3300047322 Ga0495680_0127607 Ga0495680_0127607_621_1700 341
26 3300053077 Ga0495601_0043524 Ga0495601_0043524_52_1131 341
27 3300053084 Ga0495595_0045600 Ga0495595_0045600_564_1643 341
28 iso_pu_bacteria 8054357960 8054360300 341
29 3300005445 Ga0070708_100077069 Ga0070708_1000770693 342
30 3300005618 Ga0068864_100156404 Ga0068864_1001564042 342
31 3300032002 Ga0307416_100062479 Ga0307416_1000624792 342
32 3300032126 Ga0307415_100254339 Ga0307415_1002543391 342
33 3300049686 Ga0501257_009187 Ga0501257_009187_929_1978 342
34 3300005328 Ga0070676_10003527 Ga0070676_100035275 343
35 3300005343 Ga0070687_100133340 Ga0070687_1001333402 343
36 3300005347 Ga0070668_100016565 Ga0070668_1000165653 343
37 3300005353 Ga0070669_100021076 Ga0070669_1000210762 343
38 3300005356 Ga0070674_100000909 Ga0070674_10000090914 343
39 3300005441 Ga0070700_100006978 Ga0070700_1000069783 343
40 3300005543 Ga0070672_100009789 Ga0070672_1000097894 343
41 3300005544 Ga0070686_100037946 Ga0070686_1000379462 343
42 3300005719 Ga0068861_100017664 Ga0068861_1000176645 343
43 3300006881 Ga0068865_100004510 Ga0068865_1000045107 343
44 3300009148 Ga0105243_10044301 Ga0105243_100443014 343
45 3300010159 Ga0099796_10034666 Ga0099796_100346661 343
46 3300013297 Ga0157378_10044470 Ga0157378_100444705 343
47 3300025893 Ga0207682_10056624 Ga0207682_100566242 343
48 3300025903 Ga0207680_10155687 Ga0207680_101556872 343
49 3300025923 Ga0207681_10000891 Ga0207681_1000089120 343
50 3300025935 Ga0207709_10025851 Ga0207709_100258512 343
51 3300025938 Ga0207704_10006500 Ga0207704_100065004 343
52 3300025961 Ga0207712_10082789 Ga0207712_100827893 343
53 3300025972 Ga0207668_10065874 Ga0207668_100658744 343
54 3300026075 Ga0207708_10001140 Ga0207708_1000114014 343
55 3300026089 Ga0207648_10005717 Ga0207648_100057175 343
56 3300026118 Ga0207675_100011611 Ga0207675_1000116113 343
57 3300042876 Ga0451577_0355731 Ga0451577_0355731_69_1103 343
58 3300025915 Ga0207693_10091661 Ga0207693_100916611 344
59 3300042876 Ga0451577_0003423 Ga0451577_0003423_11389_12438 344
60 3300044712 Ga0453684_0000368 Ga0453684_0000368_98545_99594 344
61 iso_pu_bacteria 2643221695 2644527995 344
62 3300005844 Ga0068862_100297772 Ga0068862_1002977722 345
63 3300035695 Ga0373927_0022337 Ga0373927_0022337_2915_3961 345
64 3300042876 Ga0451577_0034111 Ga0451577_0034111_663_1703 345
65 3300044712 Ga0453684_0048326 Ga0453684_0048326_1346_2383 345
66 3300050507 nmdc:mga05p37_81709_c1 nmdc:mga05p37_81709_c1_2618_3664 345
67 3300050512 nmdc:mga0n895_99662_c1 nmdc:mga0n895_99662_c1_63_1109 345
68 iso_pu_bacteria 2913844669 2913846417 345
69 3300009098 Ga0105245_10005100 Ga0105245_100051009 346
70 3300025927 Ga0207687_10005873 Ga0207687_100058732 346
71 3300042876 Ga0451577_0209837 Ga0451577_0209837_636_1676 346
72 3300042876 Ga0451577_0013584 Ga0451577_0013584_329_1372 347
73 3300042876 Ga0451577_0013856 Ga0451577_0013856_4033_5076 347
74 3300005458 Ga0070681_10230292 Ga0070681_102302922 348
75 3300005539 Ga0068853_100142281 Ga0068853_1001422811 348
76 3300006880 Ga0075429_100353336 Ga0075429_1003533362 348
77 3300009093 Ga0105240_10058720 Ga0105240_100587202 348
78 3300009094 Ga0111539_10056869 Ga0111539_100568695 348
79 3300009545 Ga0105237_10024294 Ga0105237_100242943 348
80 3300010375 Ga0105239_10008488 Ga0105239_1000848810 348
81 3300013307 Ga0157372_10476555 Ga0157372_104765551 348
82 3300025912 Ga0207707_10008904 Ga0207707_100089044 348
83 3300025921 Ga0207652_10266881 Ga0207652_102668811 348
84 3300026142 Ga0207698_10050012 Ga0207698_100500121 348
85 3300027907 Ga0207428_10057521 Ga0207428_100575212 348
86 3300031731 Ga0307405_10189792 Ga0307405_101897921 348
87 3300048918 Ga0496115_0000002 Ga0496115_0000002_234565_235617 348
88 3300048929 Ga0496126_0000052 Ga0496126_0000052_181736_182788 348
89 3300050511 nmdc:mga08y16_2704_c1 nmdc:mga08y16_2704_c1_8638_9687 348
90 iso_pu_bacteria 2791354901 2791911836 348
91 3300005843 Ga0068860_100024586 Ga0068860_1000245862 349
92 3300028380 Ga0268265_10279181 Ga0268265_102791812 349
93 3300028381 Ga0268264_10025545 Ga0268264_100255452 349
94 3300037471 Ga0395905_0001853 Ga0395905_0001853_20270_21319 349
95 3300046511 Ga0495608_0000989 Ga0495608_0000989_769_1818 349
96 3300046536 Ga0495587_0154744 Ga0495587_0154744_218_1267 349
97 3300046559 Ga0495667_0172018 Ga0495667_0172018_286_1335 349
98 3300047317 Ga0495604_0027231 Ga0495604_0027231_2803_3852 349
99 3300047444 Ga0495675_0062707 Ga0495675_0062707_95_1144 349
100 3300048912 Ga0496109_0134089 Ga0496109_0134089_490_1539 349
101 3300048913 Ga0496110_0014114 Ga0496110_0014114_1867_2916 349
102 3300049589 Ga0501073_0091846 Ga0501073_0091846_1024_2079 349
103 3300053077 Ga0495601_0000909 Ga0495601_0000909_10273_11322 349
104 3300053085 Ga0495619_0164072 Ga0495619_0164072_341_1390 349
105 3300005467 Ga0070706_100022554 Ga0070706_1000225542 350
106 3300005518 Ga0070699_100000085 Ga0070699_10000008573 350
107 3300005518 Ga0070699_100110641 Ga0070699_1001106412 350
108 3300006844 Ga0075428_100158730 Ga0075428_1001587302 350
109 3300006852 Ga0075433_10020196 Ga0075433_100201965 350
110 3300006871 Ga0075434_100141110 Ga0075434_1001411102 350
111 3300007076 Ga0075435_100134575 Ga0075435_1001345753 350
112 3300009094 Ga0111539_10390028 Ga0111539_103900282 350
113 3300025915 Ga0207693_10190065 Ga0207693_101900652 350
114 3300027907 Ga0207428_10053663 Ga0207428_100536632 350
115 3300035170 Ga0373943_0157613 Ga0373943_0157613_57_1130 350
116 3300046642 Ga0495634_0045090 Ga0495634_0045090_1727_2794 350
117 3300047471 Ga0495684_0080367 Ga0495684_0080367_292_1359 350
118 3300049591 Ga0501075_0286860 Ga0501075_0286860_70_1137 350
119 3300050511 nmdc:mga08y16_2483_c1 nmdc:mga08y16_2483_c1_9480_10535 350
120 3300005338 Ga0068868_100024346 Ga0068868_1000243462 351
121 3300005340 Ga0070689_100018060 Ga0070689_1000180602 351
122 3300005340 Ga0070689_100054105 Ga0070689_1000541052 351
123 3300005343 Ga0070687_100001445 Ga0070687_1000014458 351
124 3300005347 Ga0070668_100300763 Ga0070668_1003007631 351
125 3300005356 Ga0070674_100006770 Ga0070674_1000067703 351
126 3300005364 Ga0070673_100035705 Ga0070673_1000357053 351
127 3300005438 Ga0070701_10002691 Ga0070701_100026912 351
128 3300005441 Ga0070700_100025534 Ga0070700_1000255342 351
129 3300005455 Ga0070663_100015954 Ga0070663_1000159542 351
130 3300005456 Ga0070678_100014610 Ga0070678_1000146102 351
131 3300005457 Ga0070662_100000427 Ga0070662_10000042716 351
132 3300005459 Ga0068867_100041519 Ga0068867_1000415192 351
133 3300005543 Ga0070672_100031091 Ga0070672_1000310913 351
134 3300005544 Ga0070686_100000038 Ga0070686_10000003875 351
135 3300005548 Ga0070665_100232156 Ga0070665_1002321562 351
136 3300005615 Ga0070702_100038278 Ga0070702_1000382782 351
137 3300005617 Ga0068859_100055344 Ga0068859_1000553444 351
138 3300005618 Ga0068864_100122064 Ga0068864_1001220642 351
139 3300005840 Ga0068870_10102644 Ga0068870_101026442 351
140 3300005842 Ga0068858_100033401 Ga0068858_1000334014 351
141 3300005843 Ga0068860_100045427 Ga0068860_1000454272 351
142 3300006847 Ga0075431_100010439 Ga0075431_1000104394 351
143 3300006931 Ga0097620_100055347 Ga0097620_1000553474 351
144 3300009148 Ga0105243_10085082 Ga0105243_100850822 351
145 3300009177 Ga0105248_10017761 Ga0105248_100177612 351
146 3300009553 Ga0105249_10018362 Ga0105249_100183622 351
147 3300013306 Ga0163162_10147697 Ga0163162_101476971 351
148 3300014326 Ga0157380_10185056 Ga0157380_101850562 351
149 3300025908 Ga0207643_10031826 Ga0207643_100318262 351
150 3300025918 Ga0207662_10009857 Ga0207662_100098576 351
151 3300025933 Ga0207706_10000241 Ga0207706_1000024153 351
152 3300025935 Ga0207709_10062055 Ga0207709_100620552 351
153 3300025960 Ga0207651_10221330 Ga0207651_102213302 351
154 3300025961 Ga0207712_10041986 Ga0207712_100419862 351
155 3300025986 Ga0207658_10007913 Ga0207658_100079132 351
156 3300026067 Ga0207678_10014202 Ga0207678_100142024 351
157 3300026075 Ga0207708_10012120 Ga0207708_100121203 351
158 3300026089 Ga0207648_10001392 Ga0207648_1000139219 351
159 3300026095 Ga0207676_10075270 Ga0207676_100752702 351
160 3300026118 Ga0207675_100004957 Ga0207675_1000049578 351
161 3300026121 Ga0207683_10002272 Ga0207683_1000227216 351
162 3300026142 Ga0207698_10400866 Ga0207698_104008662 351
163 3300028381 Ga0268264_10131231 Ga0268264_101312311 351
164 3300039438 Ga0436360_1037159 Ga0436360_1037159_1790_2845 351
165 3300039447 Ga0436361_0616304 Ga0436361_0616304_695_1777 351
166 3300046684 Ga0495669_0108345 Ga0495669_0108345_143_1201 351
167 3300005535 Ga0070684_100269975 Ga0070684_1002699752 352
168 3300005718 Ga0068866_10051448 Ga0068866_100514482 352
169 3300005840 Ga0068870_10066358 Ga0068870_100663582 352
170 3300006881 Ga0068865_100003278 Ga0068865_1000032785 352
171 3300009094 Ga0111539_10007847 Ga0111539_100078473 352
172 3300025923 Ga0207681_10291085 Ga0207681_102910852 352
173 3300025938 Ga0207704_10003634 Ga0207704_100036345 352
174 3300027907 Ga0207428_10015529 Ga0207428_100155294 352
175 3300050511 nmdc:mga08y16_22927_c1 nmdc:mga08y16_22927_c1_732_1790 352
176 3300006237 Ga0097621_100251620 Ga0097621_1002516201 353
177 3300031727 Ga0316576_10076235 Ga0316576_100762352 353
178 3300025926 Ga0207659_10301708 Ga0207659_103017081 354
179 3300028556 Ga0265337_1000707 Ga0265337_10007072 354
180 3300031240 Ga0265320_10000101 Ga0265320_1000010131 354
181 3300047318 Ga0495636_0010819 Ga0495636_0010819_701_1777 354
182 3300037068 Ga0373925_0021405 Ga0373925_0021405_2682_3755 355
183 3300031711 Ga0265314_10007945 Ga0265314_100079453 356
184 iso_pu_bacteria 2508501009 2508539723 356
185 3300035691 Ga0373931_0097835 Ga0373931_0097835_539_1612 357
186 3300003659 JGI25404J52841_10001350 JGI25404J52841_100013503 360
187 3300037853 Ga0436364_1216541 Ga0436364_1216541_1559_2683 360
188 3300044694 Ga0466963_0195007 Ga0466963_0195007_95_1189 360

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03435

Sacchrp_dh_NADP

Saccharopine dehydrogenase NADP binding domain

27

146

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ic5-assembly2.cif.gz_B n-terminal domain of putative saccharopine dehydrogenase from ruegeria pomeroyi. 0.8959 1 100
6kwt-assembly1.cif.gz_A crystal structure of gre2 in complex with nadph complex from candida albicans 0.849 4 101
7zp9-assembly1.cif.gz_L ktrab complex - ktra8 ring with a ktrb dimer on each side 0.8337 4 107
3svt-assembly1.cif.gz_B structure of a short-chain type dehydrogenase/reductase from mycobacterium ulcerans 0.8138 4 125
7xwu-assembly2.cif.gz_B ketoreductase cpkr mutant - m1 0.8135 4 102
ID Description Score Start End Superfamily
af_A4I3C3_4_163_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9255 4 135 3.40.50.720
af_Q9VG81_6_173_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9244 4 135 3.40.50.720
af_A0A0P0Y6T5_38_191_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9176 4 130 3.40.50.720
af_I1LWP4_7_171_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9149 2 125 3.40.50.720
af_Q5RHQ4_13_183_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9134 5 135 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A250BH59-F1-model_v4 deleted 0.98 4 121
AF-A0A6A9SZM7-F1-model_v4 NAD(P)H-binding protein 0.9786 4 350
AF-A0A3B0W4A8-F1-model_v4 Saccharopine dehydrogenase NADP binding domain-containing protein 0.9779 3 350
AF-A0A7T9CGN1-F1-model_v4 deleted 0.9771 1 350
AF-A0A4D6HGJ1-F1-model_v4 Saccharopine dehydrogenase 0.9766 3 350

Feature Viewer

pLDDT pTM Quality
89.36 0.89 High
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Predicted Structure (AlphaFold2)

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