F288897

General Info

Members Datasets Scaffolds Average Seq Length
188 137 183 650

Family's Representative Sequence

Representative Sequence 3300005434|Ga0070709_10001262|Ga0070709_100012623
Length 690
Sequence MRSLWDDAEAGRYRGELGLRVYTSRLLGRDRSLVLHGGGNTSVKLRRRNLFGEEEEVLYVKGSGWDLERIEESGFTPVRLDAARRLAELEELGDPEMVEQLAIHTLRAGAPPASVEALLHAILPRRFVDHTHADAVVTVTDTPDGAERVREIYGDSVIVIPYVMPGFQLARAVFERISAGDGGTALPESVLGMVLLKHGIFSFADQARESYERMIHLVGLAEDHLRARNAWVLDPADGPAGEADGTGGQRVAGGHPGSVSLASAVAAPLSPGEAAAVAALRRELSAAAGRPLVLTSRRDPRAFRFVRRPDLAALALQGPITPDHVLRTRPLPLLGRDVAAYAAAYRRHFEEHAPAAREPKTMLDPAPRIVLDPELGMLAAGRTAAEAAIAAEIYGHTMDVVERADRLGGYRVPSAAELFEMEYWDLEQAKLRRAGEPPPLAGEVALVTGAASGIGKACVEVLLARGAAVAALDVDSRIEDLFPRPAALGLRCDVTAEEQVSGALAAAVAAYGGLDVLILNAGVFPAGRDIAALELEEWRRVMAVNLDANLVLMRRCHALLRQAPRGGRVAVIGSKNVPAPGPGVAAYSASKAALQQLARVAALEWGRDGIRVNIVHPNAVFDTALWTEERIAARAAAYHLDVEAYRRSNVLGLEVRSRDVAEAAVELCGPRFSRTTGAQVPVDGGNDRVI

Samples

Sample ID Description Type Environment
1 2643221649 Leifsonia sp. Root4 Isolate Unclassified
2 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
3 2887443736 Ruania rhizosphaerae LNNU 22110 Isolate Rhizosphere
4 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
5 2946033335 Microbacterium sp. W4I4 Isolate Rhizosphere
6 3300000545 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNX_Illumina_Assembled Metagenome Rhizosphere
7 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
8 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
9 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
10 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
11 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
12 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
13 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
14 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
15 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
19 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
20 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
23 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
24 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
25 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
26 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
27 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
28 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
29 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
30 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
31 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
32 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
33 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
34 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
35 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
36 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
37 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
38 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
39 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
40 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
41 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
43 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
45 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
46 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
47 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
51 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
58 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
59 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
60 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
61 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
62 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
63 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
64 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
65 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
66 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
67 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
68 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
69 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
70 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
71 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
72 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
73 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
74 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
75 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
76 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
77 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
78 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
79 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
80 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
81 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
82 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
83 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
84 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
85 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
86 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
87 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
88 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
89 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
90 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
91 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
92 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
93 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
94 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
95 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
96 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
97 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
98 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
99 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
100 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
101 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
102 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
103 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
104 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
105 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
106 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
107 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
108 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
109 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
111 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
116 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
117 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
118 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
119 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
120 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
121 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
122 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
123 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
125 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
126 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
127 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
128 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
129 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
130 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
131 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
132 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
133 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
134 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
135 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
136 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
137 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.28
Metatranscriptomes 1.06
Isolates 2.66

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.32
Nodule 0
Rhizoplane 2.13
Rhizosphere 87.77
Stem 0
Stem Tuber 0
Unclassified 4.79

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 CNXas_1000078 3300000545 Bacteria 18215
2 rootH2_10041875 3300003320 Bacteria 3852
3 Ga0006562J51391_1116027 3300003578 Bacteria 8280
4 Ga0055539_1000103 3300003752 Bacteria 96081
5 Ga0055533_1000020 3300003756 Bacteria 353998
6 Ga0055525_1000235 3300003759 Bacteria 57710
7 Ga0055541_1004751 3300003841 Bacteria 2438
8 Ga0070658_10004310 3300005327 Bacteria 11625
9 Ga0070683_100000029 3300005329 Bacteria 158913
10 Ga0070670_100035532 3300005331 Bacteria 4290
11 Ga0070670_100098481 3300005331 Bacteria 2516
12 Ga0070675_100003897 3300005354 Bacteria 11306
13 Ga0070667_100024077 3300005367 Bacteria 5056
14 Ga0070709_10001262 3300005434 Bacteria 13847
15 Ga0070705_100027628 3300005440 Bacteria 3100
16 Ga0070694_100000731 3300005444 Bacteria 18339
17 Ga0070681_10007592 3300005458 Bacteria 10603
18 Ga0070699_100017626 3300005518 Bacteria 6130
19 Ga0070684_100000314 3300005535 Bacteria 33499
20 Ga0070697_100017590 3300005536 Bacteria 5628
21 Ga0070695_100016099 3300005545 Bacteria 4521
22 Ga0070696_100008613 3300005546 Bacteria 6824
23 Ga0070696_100043527 3300005546 Bacteria 3106
24 Ga0070704_100093497 3300005549 Bacteria 2247
25 Ga0081455_10002187 3300005937 Bacteria 23297
26 Ga0081540_1014787 3300005983 Bacteria 4975
27 Ga0081539_10000556 3300005985 Bacteria 77121
28 Ga0075432_10004509 3300006058 Bacteria 4747
29 Ga0070716_100010517 3300006173 Bacteria 4641
30 Ga0075428_100000855 3300006844 Bacteria 32010
31 Ga0075428_100002645 3300006844 Bacteria 19460
32 Ga0075428_100007114 3300006844 Bacteria 12391
33 Ga0075428_100131876 3300006844 Bacteria 2717
34 Ga0075430_100003147 3300006846 Bacteria 13806
35 Ga0075430_100006367 3300006846 Bacteria 9954
36 Ga0075430_100011126 3300006846 Bacteria 7628
37 Ga0075430_100065785 3300006846 Bacteria 3045
38 Ga0075431_100016987 3300006847 Bacteria 7389
39 Ga0075431_100018234 3300006847 Bacteria 7141
40 Ga0075431_100095227 3300006847 Bacteria 3073
41 Ga0075433_10011285 3300006852 Bacteria 7191
42 Ga0075433_10027088 3300006852 Bacteria 4859
43 Ga0075434_100000004 3300006871 Bacteria 112839
44 Ga0075434_100006061 3300006871 Bacteria 11057
45 Ga0075429_100000432 3300006880 Bacteria 31238
46 Ga0075429_100003721 3300006880 Bacteria 13005
47 Ga0075429_100015285 3300006880 Bacteria 6652
48 Ga0075436_100000072 3300006914 Bacteria 61965
49 Ga0075436_100000500 3300006914 Bacteria 25332
50 Ga0075436_100001948 3300006914 Bacteria 14216
51 Ga0075436_100018734 3300006914 Bacteria 4740
52 Ga0075435_100003086 3300007076 Bacteria 11243
53 Ga0075435_100032977 3300007076 Bacteria 4092
54 Ga0111539_10028376 3300009094 Bacteria 6829
55 Ga0105245_10000021 3300009098 Bacteria 181628
56 Ga0114129_10002979 3300009147 Bacteria 23727
57 Ga0114129_10005669 3300009147 Bacteria 17678
58 Ga0114129_10013122 3300009147 Bacteria 11802
59 Ga0105242_10006182 3300009176 Bacteria 9225
60 Ga0157378_10000240 3300013297 Bacteria 53471
61 Ga0157375_10000015 3300013308 Bacteria 308254
62 Ga0209566_100043 3300025225 Bacteria 266609
63 Ga0209674_100001 3300025226 Bacteria 4013750
64 Ga0209563_100001 3300025230 Bacteria 4013775
65 Ga0209677_100001 3300025253 Bacteria 4013787
66 Ga0207699_10000952 3300025906 Bacteria 13807
67 Ga0207707_10011165 3300025912 Bacteria 7813
68 Ga0207687_10000002 3300025927 Bacteria 975489
69 Ga0207687_10010080 3300025927 Bacteria 6179
70 Ga0207665_10018163 3300025939 Bacteria 4621
71 Ga0207661_10000001 3300025944 Bacteria 937688
72 Ga0207676_10019224 3300026095 Bacteria 4980
73 Ga0207428_10000787 3300027907 Bacteria 35931
74 Ga0207428_10002169 3300027907 Bacteria 19691
75 Ga0207428_10020560 3300027907 Bacteria 5606
76 Ga0265334_10003793 3300028573 Bacteria 6832
77 Ga0265318_10003074 3300028577 Bacteria 8576
78 Ga0265330_10002982 3300031235 Bacteria 9006
79 Ga0265328_10004319 3300031239 Bacteria 6181
80 Ga0265320_10007020 3300031240 Bacteria 7020
81 Ga0265329_10008809 3300031242 Bacteria 3803
82 Ga0265331_10001016 3300031250 Bacteria 21942
83 Ga0265331_10023186 3300031250 Bacteria 3157
84 Ga0265313_10013326 3300031595 Bacteria 4941
85 Ga0316575_10018632 3300031665 Bacteria 2649
86 Ga0316579_10001320 3300031691 Bacteria 8962
87 Ga0316579_10016458 3300031691 Bacteria 3230
88 Ga0265314_10000944 3300031711 Bacteria 34198
89 Ga0265314_10005790 3300031711 Bacteria 11085
90 Ga0316576_10052494 3300031727 Bacteria 2968
91 Ga0316578_10008954 3300031728 Bacteria 5120
92 Ga0316578_10037519 3300031728 Bacteria 2792
93 Ga0316577_10002364 3300031733 Bacteria 9313
94 Ga0307409_100069023 3300031995 Bacteria 2798
95 Ga0316583_10003955 3300032133 Bacteria 5264
96 Ga0316588_1007038 3300033528 Bacteria 2271
97 Ga0373929_0000001 3300035085 Bacteria 956023
98 Ga0373936_0001812 3300035113 Bacteria 7861
99 Ga0373936_0015607 3300035113 Unclassified 2911
100 Ga0373954_0000030 3300035118 Bacteria 55716
101 Ga0373946_0010595 3300035171 Bacteria 3417
102 Ga0373961_0001662 3300035241 Bacteria 6209
103 Ga0316574_0003009 3300035398 Bacteria 8592
104 Ga0316574_0037857 3300035398 Bacteria 2960
105 Ga0373924_0029984 3300035410 Bacteria 2178
106 Ga0373933_0019424 3300035724 Bacteria 3839
107 Ga0373937_0025516 3300036401 Bacteria 5335
108 Ga0373937_0075457 3300036401 Bacteria 3113
109 Ga0316582_0013629 3300036647 Bacteria 4583
110 Ga0316584_0035328 3300036712 Bacteria 3708
111 Ga0373925_0005824 3300037068 Bacteria 9145
112 Ga0395900_0000769 3300037418 Bacteria 42670
113 Ga0400488_60469 3300038741 Bacteria 14866
114 Ga0400483_044591 3300039062 Bacteria 3699
115 Ga0400483_106552 3300039062 Bacteria 33444
116 Ga0400483_130056 3300039062 Bacteria 6127
117 Ga0400487_62913 3300039110 Bacteria 6146
118 Ga0436365_1795306 3300039437 Bacteria 15863
119 Ga0436362_0349680 3300039453 Bacteria 2924
120 Ga0436362_0981399 3300039453 Bacteria 2367
121 Ga0439434_0000787 3300042435 Bacteria 9139
122 Ga0439435_0006033 3300042436 Bacteria 2703
123 Ga0451577_0054696 3300042876 Bacteria 3563
124 Ga0466963_0089912 3300044694 Bacteria 2090
125 Ga0451576_0002848 3300045051 Bacteria 24854
126 Ga0451576_0056812 3300045051 Bacteria 4092
127 Ga0466967_0018812 3300045976 Bacteria 5535
128 Ga0495580_0002396 3300046472 Bacteria 16381
129 Ga0495582_0008932 3300046473 Bacteria 5531
130 Ga0495662_0025958 3300046476 Bacteria 2830
131 Ga0495586_0012433 3300046535 Bacteria 4515
132 Ga0495647_0000305 3300046681 Bacteria 13804
133 Ga0495658_0001115 3300046683 Bacteria 14207
134 Ga0495669_0003443 3300046684 Bacteria 6520
135 Ga0496101_0049115 3300048904 Bacteria 3034
136 Ga0496114_0000001 3300048917 Bacteria 893286
137 Ga0496114_0017627 3300048917 Bacteria 5767
138 Ga0496115_0004743 3300048918 Bacteria 9860
139 Ga0501031_0038858 3300049568 Bacteria 3105
140 Ga0501038_0002390 3300049574 Bacteria 17485
141 Ga0501038_0048672 3300049574 Bacteria 3667
142 Ga0501040_0024295 3300049576 Bacteria 4066
143 Ga0501040_0029863 3300049576 Bacteria 3679
144 Ga0501041_0003452 3300049577 Bacteria 9096
145 Ga0501041_0018324 3300049577 Bacteria 4171
146 Ga0501043_0011470 3300049579 Bacteria 6938
147 Ga0501048_0000534 3300049582 Bacteria 26788
148 Ga0501068_0031675 3300049584 Bacteria 3141
149 Ga0501072_0048163 3300049588 Bacteria 3356
150 Ga0501073_0003699 3300049589 Bacteria 11488
151 Ga0501073_0040509 3300049589 Bacteria 3296
152 Ga0501075_0000221 3300049591 Bacteria 30230
153 Ga0501076_0002254 3300049592 Bacteria 13201
154 Ga0501079_0002190 3300049741 Bacteria 14086
155 Ga0501079_0035708 3300049741 Bacteria 3827
156 Ga0501080_0013001 3300049742 Bacteria 7642
157 Ga0501080_0025067 3300049742 Bacteria 5534
158 Ga0501080_0076427 3300049742 Bacteria 3114
159 Ga0501081_0000368 3300049743 Bacteria 24573
160 Ga0501035_0010939 3300049822 Bacteria 8403
161 Ga0501045_0016672 3300049824 Bacteria 5219
162 nmdc:mga05p37_14144_c2 3300050507 Bacteria 8409
163 nmdc:mga05p37_1999_c1 3300050507 Bacteria 23807
164 nmdc:mga05p37_4368_c1 3300050507 Bacteria 16507
165 nmdc:mga09592_38287_c1 3300050508 Bacteria 4025
166 nmdc:mga09592_954_c1 3300050508 Bacteria 22755
167 nmdc:mga0qj67_10185_c1 3300050509 Bacteria 7019
168 nmdc:mga06r32_12053_c1 3300050510 Bacteria 7791
169 nmdc:mga06r32_14493_c1 3300050510 Bacteria 7155
170 nmdc:mga06r32_8445_c1 3300050510 Bacteria 9281
171 nmdc:mga08y16_22851_c1 3300050511 Bacteria 6601
172 nmdc:mga08y16_42866_c1 3300050511 Bacteria 4740
173 nmdc:mga08y16_4573_c1 3300050511 Bacteria 14419
174 nmdc:mga0n895_25145_c1 3300050512 Bacteria 5623
175 nmdc:mga0rr50_11580_c1 3300050513 Bacteria 5655
176 nmdc:mga08x19_127_c1 3300050514 Bacteria 67058
177 nmdc:mga08x19_633_c1 3300050514 Bacteria 22726
178 nmdc:mga0a205_30997_c1 3300050515 Bacteria 5122
179 Ga0500588_0001254 3300053146 Bacteria 4732
180 Ga0500622_0006578 3300053156 Bacteria 6711
181 Ga0501084_0030557 3300054114 Bacteria 4504
182 Ga0501082_0019192 3300060353 Bacteria 5891
183 Ga0501082_0040669 3300060353 Bacteria 4009

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300050511 nmdc:mga08y16_42866_c1 nmdc:mga08y16_42866_c1_3078_4718 542
2 3300035113 Ga0373936_0015607 Ga0373936_0015607_73_1821 575
3 3300009098 Ga0105245_10000021 Ga0105245_10000021148 606
4 3300025927 Ga0207687_10000002 Ga0207687_10000002864 606
5 3300028577 Ga0265318_10003074 Ga0265318_100030743 611
6 3300013297 Ga0157378_10000240 Ga0157378_1000024035 616
7 3300003578 Ga0006562J51391_1116027 Ga0006562J51391_11160276 623
8 3300003752 Ga0055539_1000103 Ga0055539_100010378 625
9 3300003756 Ga0055533_1000020 Ga0055533_1000020324 625
10 3300003759 Ga0055525_1000235 Ga0055525_100023512 625
11 3300003841 Ga0055541_1004751 Ga0055541_10047512 625
12 3300005329 Ga0070683_100000029 Ga0070683_10000002912 625
13 3300005535 Ga0070684_100000314 Ga0070684_1000003144 625
14 3300025225 Ga0209566_100043 Ga0209566_100043233 625
15 3300025226 Ga0209674_100001 Ga0209674_1000013577 625
16 3300025230 Ga0209563_100001 Ga0209563_1000013577 625
17 3300025253 Ga0209677_100001 Ga0209677_1000013577 625
18 3300025944 Ga0207661_10000001 Ga0207661_10000001663 625
19 3300005983 Ga0081540_1014787 Ga0081540_10147874 630
20 3300032133 Ga0316583_10003955 Ga0316583_100039553 630
21 3300005546 Ga0070696_100008613 Ga0070696_1000086138 632
22 3300046476 Ga0495662_0025958 Ga0495662_0025958_673_2646 633
23 3300039062 Ga0400483_130056 Ga0400483_130056_3037_5004 635
24 3300049574 Ga0501038_0048672 Ga0501038_0048672_926_2854 635
25 3300049576 Ga0501040_0029863 Ga0501040_0029863_208_2136 635
26 3300049584 Ga0501068_0031675 Ga0501068_0031675_175_2103 635
27 3300049588 Ga0501072_0048163 Ga0501072_0048163_980_2908 635
28 3300049591 Ga0501075_0000221 Ga0501075_0000221_7661_9589 635
29 3300049741 Ga0501079_0002190 Ga0501079_0002190_526_2454 635
30 3300049742 Ga0501080_0025067 Ga0501080_0025067_3443_5371 635
31 3300049824 Ga0501045_0016672 Ga0501045_0016672_2580_4508 635
32 3300054114 Ga0501084_0030557 Ga0501084_0030557_738_2666 635
33 3300060353 Ga0501082_0019192 Ga0501082_0019192_2510_4438 635
34 iso_pu_bacteria 2887443736 2887445319 635
35 3300048917 Ga0496114_0000001 Ga0496114_0000001_201511_203505 636
36 3300025927 Ga0207687_10010080 Ga0207687_100100803 637
37 3300042876 Ga0451577_0054696 Ga0451577_0054696_287_2257 637
38 3300045051 Ga0451576_0002848 Ga0451576_0002848_8748_10718 637
39 iso_pu_bacteria 2643221649 2644278080 637
40 3300005327 Ga0070658_10004310 Ga0070658_100043103 638
41 3300005331 Ga0070670_100098481 Ga0070670_1000984811 638
42 3300005354 Ga0070675_100003897 Ga0070675_1000038978 638
43 3300006852 Ga0075433_10027088 Ga0075433_100270882 638
44 3300044694 Ga0466963_0089912 Ga0466963_0089912_46_2013 640
45 3300039110 Ga0400487_62913 Ga0400487_62913_4135_6105 641
46 iso_pu_bacteria 2844841374 2844844031 641
47 iso_pu_bacteria 2919055335 2919055952 641
48 3300049574 Ga0501038_0002390 Ga0501038_0002390_14141_16108 642
49 3300049582 Ga0501048_0000534 Ga0501048_0000534_4086_6053 642
50 3300035241 Ga0373961_0001662 Ga0373961_0001662_865_2862 643
51 3300005440 Ga0070705_100027628 Ga0070705_1000276282 645
52 3300005444 Ga0070694_100000731 Ga0070694_10000073120 645
53 3300028573 Ga0265334_10003793 Ga0265334_100037932 645
54 3300031235 Ga0265330_10002982 Ga0265330_100029826 645
55 3300031240 Ga0265320_10007020 Ga0265320_100070203 645
56 3300031595 Ga0265313_10013326 Ga0265313_100133264 645
57 3300031711 Ga0265314_10005790 Ga0265314_100057902 645
58 3300033528 Ga0316588_1007038 Ga0316588_10070381 645
59 3300005937 Ga0081455_10002187 Ga0081455_1000218721 646
60 3300006058 Ga0075432_10004509 Ga0075432_100045094 646
61 3300006173 Ga0070716_100010517 Ga0070716_1000105172 646
62 3300006844 Ga0075428_100007114 Ga0075428_1000071143 646
63 3300006852 Ga0075433_10011285 Ga0075433_100112854 646
64 3300006871 Ga0075434_100006061 Ga0075434_1000060615 646
65 3300006914 Ga0075436_100018734 Ga0075436_1000187343 646
66 3300007076 Ga0075435_100003086 Ga0075435_1000030866 646
67 3300025939 Ga0207665_10018163 Ga0207665_100181631 646
68 3300027907 Ga0207428_10000787 Ga0207428_1000078722 646
69 iso_pu_bacteria 2946033335 2946035077 646
70 3300005331 Ga0070670_100035532 Ga0070670_1000355322 647
71 3300035398 Ga0316574_0037857 Ga0316574_0037857_874_2847 647
72 3300036712 Ga0316584_0035328 Ga0316584_0035328_535_2508 647
73 3300042436 Ga0439435_0006033 Ga0439435_0006033_318_2288 647
74 3300013308 Ga0157375_10000015 Ga0157375_10000015133 648
75 3300031665 Ga0316575_10018632 Ga0316575_100186322 648
76 3300036401 Ga0373937_0075457 Ga0373937_0075457_124_2106 648
77 3300031250 Ga0265331_10023186 Ga0265331_100231862 649
78 3300003320 rootH2_10041875 rootH2_100418752 650
79 3300006846 Ga0075430_100006367 Ga0075430_1000063672 650
80 3300006847 Ga0075431_100016987 Ga0075431_1000169872 650
81 3300048904 Ga0496101_0049115 Ga0496101_0049115_863_2833 650
82 3300048917 Ga0496114_0017627 Ga0496114_0017627_2922_4892 650
83 3300048918 Ga0496115_0004743 Ga0496115_0004743_628_2598 650
84 3300050510 nmdc:mga06r32_8445_c1 nmdc:mga06r32_8445_c1_3227_5254 650
85 3300027907 Ga0207428_10020560 Ga0207428_100205604 651
86 3300049592 Ga0501076_0002254 Ga0501076_0002254_4838_6814 651
87 3300049743 Ga0501081_0000368 Ga0501081_0000368_18231_20207 651
88 3300039453 Ga0436362_0349680 Ga0436362_0349680_532_2490 652
89 3300037418 Ga0395900_0000769 Ga0395900_0000769_4991_6952 653
90 3300039453 Ga0436362_0981399 Ga0436362_0981399_250_2211 653
91 3300031995 Ga0307409_100069023 Ga0307409_1000690232 654
92 3300039437 Ga0436365_1795306 Ga0436365_1795306_13622_15586 654
93 3300049577 Ga0501041_0018324 Ga0501041_0018324_812_2776 654
94 3300053156 Ga0500622_0006578 Ga0500622_0006578_1367_3331 654
95 3300009094 Ga0111539_10028376 Ga0111539_100283763 655
96 3300009147 Ga0114129_10013122 Ga0114129_100131227 655
97 3300038741 Ga0400488_60469 Ga0400488_60469_9414_11381 655
98 3300039062 Ga0400483_106552 Ga0400483_106552_20390_22357 655
99 3300050507 nmdc:mga05p37_14144_c2 nmdc:mga05p37_14144_c2_3764_5746 655
100 3300050510 nmdc:mga06r32_12053_c1 nmdc:mga06r32_12053_c1_2235_4217 655
101 3300050511 nmdc:mga08y16_22851_c1 nmdc:mga08y16_22851_c1_1377_3359 655
102 3300050512 nmdc:mga0n895_25145_c1 nmdc:mga0n895_25145_c1_3566_5548 655
103 3300050513 nmdc:mga0rr50_11580_c1 nmdc:mga0rr50_11580_c1_149_2131 655
104 3300050515 nmdc:mga0a205_30997_c1 nmdc:mga0a205_30997_c1_2992_4974 655
105 3300053146 Ga0500588_0001254 Ga0500588_0001254_288_2255 655
106 3300005434 Ga0070709_10001262 Ga0070709_100012623 656
107 3300005458 Ga0070681_10007592 Ga0070681_100075928 656
108 3300005518 Ga0070699_100017626 Ga0070699_1000176265 656
109 3300005536 Ga0070697_100017590 Ga0070697_1000175906 656
110 3300005545 Ga0070695_100016099 Ga0070695_1000160996 656
111 3300005546 Ga0070696_100043527 Ga0070696_1000435273 656
112 3300005549 Ga0070704_100093497 Ga0070704_1000934972 656
113 3300005985 Ga0081539_10000556 Ga0081539_1000055614 656
114 3300006844 Ga0075428_100000855 Ga0075428_10000085519 656
115 3300006844 Ga0075428_100131876 Ga0075428_1001318762 656
116 3300006846 Ga0075430_100003147 Ga0075430_10000314714 656
117 3300006846 Ga0075430_100011126 Ga0075430_1000111264 656
118 3300006846 Ga0075430_100065785 Ga0075430_1000657852 656
119 3300006847 Ga0075431_100018234 Ga0075431_1000182348 656
120 3300006847 Ga0075431_100095227 Ga0075431_1000952272 656
121 3300006871 Ga0075434_100000004 Ga0075434_10000000483 656
122 3300006880 Ga0075429_100000432 Ga0075429_10000043220 656
123 3300006880 Ga0075429_100015285 Ga0075429_1000152858 656
124 3300006914 Ga0075436_100000500 Ga0075436_10000050018 656
125 3300006914 Ga0075436_100001948 Ga0075436_10000194817 656
126 3300007076 Ga0075435_100032977 Ga0075435_1000329774 656
127 3300009147 Ga0114129_10002979 Ga0114129_1000297926 656
128 3300009147 Ga0114129_10005669 Ga0114129_1000566913 656
129 3300009176 Ga0105242_10006182 Ga0105242_100061828 656
130 3300025906 Ga0207699_10000952 Ga0207699_100009523 656
131 3300025912 Ga0207707_10011165 Ga0207707_100111658 656
132 3300026095 Ga0207676_10019224 Ga0207676_100192244 656
133 3300027907 Ga0207428_10002169 Ga0207428_1000216918 656
134 3300031239 Ga0265328_10004319 Ga0265328_100043195 656
135 3300031242 Ga0265329_10008809 Ga0265329_100088092 656
136 3300031250 Ga0265331_10001016 Ga0265331_1000101621 656
137 3300031711 Ga0265314_10000944 Ga0265314_1000094431 656
138 3300031727 Ga0316576_10052494 Ga0316576_100524942 656
139 3300031728 Ga0316578_10008954 Ga0316578_100089544 656
140 3300031733 Ga0316577_10002364 Ga0316577_100023644 656
141 3300035085 Ga0373929_0000001 Ga0373929_0000001_675546_677516 656
142 3300035113 Ga0373936_0001812 Ga0373936_0001812_441_2423 656
143 3300035118 Ga0373954_0000030 Ga0373954_0000030_52606_54576 656
144 3300035171 Ga0373946_0010595 Ga0373946_0010595_1316_3298 656
145 3300035398 Ga0316574_0003009 Ga0316574_0003009_101_2071 656
146 3300035410 Ga0373924_0029984 Ga0373924_0029984_59_2041 656
147 3300035724 Ga0373933_0019424 Ga0373933_0019424_843_2813 656
148 3300036401 Ga0373937_0025516 Ga0373937_0025516_2193_4163 656
149 3300036647 Ga0316582_0013629 Ga0316582_0013629_1372_3342 656
150 3300037068 Ga0373925_0005824 Ga0373925_0005824_6585_8567 656
151 3300039062 Ga0400483_044591 Ga0400483_044591_1590_3560 656
152 3300042435 Ga0439434_0000787 Ga0439434_0000787_4914_6884 656
153 3300045051 Ga0451576_0056812 Ga0451576_0056812_1817_3787 656
154 3300045976 Ga0466967_0018812 Ga0466967_0018812_2599_4569 656
155 3300046472 Ga0495580_0002396 Ga0495580_0002396_4876_6858 656
156 3300046473 Ga0495582_0008932 Ga0495582_0008932_1470_3452 656
157 3300046535 Ga0495586_0012433 Ga0495586_0012433_389_2371 656
158 3300046681 Ga0495647_0000305 Ga0495647_0000305_11764_13746 656
159 3300046683 Ga0495658_0001115 Ga0495658_0001115_1489_3471 656
160 3300046684 Ga0495669_0003443 Ga0495669_0003443_162_2132 656
161 3300049568 Ga0501031_0038858 Ga0501031_0038858_65_2041 656
162 3300049576 Ga0501040_0024295 Ga0501040_0024295_641_2611 656
163 3300049577 Ga0501041_0003452 Ga0501041_0003452_1544_3514 656
164 3300049589 Ga0501073_0040509 Ga0501073_0040509_1228_3198 656
165 3300049741 Ga0501079_0035708 Ga0501079_0035708_1440_3410 656
166 3300049742 Ga0501080_0076427 Ga0501080_0076427_227_2197 656
167 3300050507 nmdc:mga05p37_1999_c1 nmdc:mga05p37_1999_c1_18534_20513 656
168 3300050507 nmdc:mga05p37_4368_c1 nmdc:mga05p37_4368_c1_13540_15510 656
169 3300050508 nmdc:mga09592_38287_c1 nmdc:mga09592_38287_c1_1845_3824 656
170 3300050508 nmdc:mga09592_954_c1 nmdc:mga09592_954_c1_17825_19795 656
171 3300050509 nmdc:mga0qj67_10185_c1 nmdc:mga0qj67_10185_c1_2031_4010 656
172 3300050510 nmdc:mga06r32_14493_c1 nmdc:mga06r32_14493_c1_4456_6426 656
173 3300050511 nmdc:mga08y16_4573_c1 nmdc:mga08y16_4573_c1_6707_8686 656
174 3300050514 nmdc:mga08x19_633_c1 nmdc:mga08x19_633_c1_8022_9992 656
175 3300005367 Ga0070667_100024077 Ga0070667_1000240774 657
176 3300006844 Ga0075428_100002645 Ga0075428_10000264515 657
177 3300006880 Ga0075429_100003721 Ga0075429_10000372111 657
178 3300006914 Ga0075436_100000072 Ga0075436_10000007238 657
179 3300031691 Ga0316579_10001320 Ga0316579_100013209 657
180 3300031691 Ga0316579_10016458 Ga0316579_100164581 657
181 3300031728 Ga0316578_10037519 Ga0316578_100375192 657
182 3300049579 Ga0501043_0011470 Ga0501043_0011470_2489_4465 657
183 3300049589 Ga0501073_0003699 Ga0501073_0003699_4943_6919 657
184 3300049742 Ga0501080_0013001 Ga0501080_0013001_5373_7349 657
185 3300049822 Ga0501035_0010939 Ga0501035_0010939_6268_8244 657
186 3300050514 nmdc:mga08x19_127_c1 nmdc:mga08x19_127_c1_36353_38356 657
187 3300060353 Ga0501082_0040669 Ga0501082_0040669_1176_3152 657
188 3300000545 CNXas_1000078 CNXas_10000784 658

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

443

633

0.92

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

449

687

0.88

PF00596

Aldolase_II

Class II Aldolase and Adducin N-terminal domain

19

225

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
3m4r-assembly1.cif.gz_A structure of the n-terminal class ii aldolase domain of a conserved protein from thermoplasma acidophilum 0.9544 1 220
3m4r-assembly1.cif.gz_A structure of the n-terminal class ii aldolase domain of a conserved protein from thermoplasma acidophilum 0.9415 1 220
4bmn-assembly1.cif.gz_D apo structure of short-chain alcohol dehydrogenase from ralstonia sp. dsm 6428 0.9248 410 652
5k9z-assembly2.cif.gz_D crystal structure of putative short-chain dehydrogenase/reductase from burkholderia xenovorans lb400 0.9245 410 652
2d1y-assembly1.cif.gz_B crystal structure of tt0321 from thermus thermophilus hb8 0.9228 406 653
ID Description Score Start End Superfamily
3m4rA01 Alpha Beta;3-Layer(aba) Sandwich;L-fuculose-1-phosphate Aldolase;Class II aldolase/adducin N-terminal domain 0.9468 15 220 3.40.225.10
3m4rA01 Alpha Beta;3-Layer(aba) Sandwich;L-fuculose-1-phosphate Aldolase;Class II aldolase/adducin N-terminal domain 0.9375 15 220 3.40.225.10
5k9zA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9261 410 652 3.40.50.720
4bmnA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9178 403 652 3.40.50.720
af_Q2QLP7_18_222_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9178 411 586 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A0F9KLV3-F1-model_v4 Class II aldolase/adducin N-terminal domain-containing protein 0.9761 1 149
AF-A0A381VRL7-F1-model_v4 Class II aldolase/adducin N-terminal domain-containing protein 0.9694 44 226
AF-A0A3D3QD44-F1-model_v4 deleted 0.969 436 658
AF-A0A536SEM4-F1-model_v4 Bifunctional aldolase/short-chain dehydrogenase 0.9682 1 334
AF-A0A536SEM4-F1-model_v4 Bifunctional aldolase/short-chain dehydrogenase 0.9654 1 334

Feature Viewer

pLDDT pTM Quality
91.4 0.9 High
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Predicted Structure (AlphaFold2)

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