F288875

General Info

Members Datasets Scaffolds Average Seq Length
188 136 181 535

Family's Representative Sequence

Representative Sequence 3300005355|Ga0070671_100093649|Ga0070671_1000936492
Length 573
Sequence MREREHLSSAIFGRIMQQHGDDPSTAARLSAMTRASMAGSMQPYALTLDRFIDHAAKWHGSAEVVTGRADGVSARTTYSALRDRSRRLSGALRSLGLELGDHFAVLAWNSQAHMECWYGAMGIGIVCHTLNPRASHTHLAGMIRQAGDRVLAVSPDLTSLAEQLMPLCPTIEHVVVLDQPGPDTPLPGCHRVRAWRYEDLLTERGQAVPWGGFDENTPAGLCFTSGTTGAAKGVTYTHRSNYLHTVHQLQADSCGLTSRDSVLVAVPMFHANAWGFPFAGPAAGAKLVLPGRQQDGLSLARLINAEGVTLGAGVATVWLGLVDHLDRTGAEVPSLERIMIGGASVPQALLDRLEERLGVRVQTSWGMTELSPLGTATPPTASVRRASSAGRPAIGVDLLLTDADGVPLPDQRGHEGRLRVRGASVIARYFGEDEPAVDRDGWLDTGDLAVIDGDGHVSITGRAKDLIKSGGEWINPAEIEAIVGALPDVALVAVIGRPHAKWGERPVLIVELRAGAQITDDALLDALRSRVASWWLPDAVVRVAAMPLALTGKIDKKRLRADHGASEESRQCS

Samples

Sample ID Description Type Environment
1 2643221545 Caulobacter sp. Root1455 Isolate Unclassified
2 2643221562 Rhodanobacter sp. Root561 Isolate Unclassified
3 2643221691 Caulobacter sp. Root487D2Y Isolate Unclassified
4 2643221699 Brevundimonas sp. Root1423 Isolate Unclassified
5 2830075706 Sphingomonas jinjuensis DSM 21457 Isolate Rhizosphere
6 2852653556 Sphingopyxis sp. JAI108 Isolate Rhizosphere
7 2885429604 Sphingomonas sp. WZY 27 Isolate Rhizosphere
8 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
9 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
10 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
11 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
12 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
13 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
14 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
15 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
16 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
17 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
18 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
19 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
20 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
21 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
22 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
23 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
24 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
25 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
26 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
32 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
36 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
37 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
38 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
39 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
40 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
41 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
42 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
43 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
44 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
45 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
46 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
47 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
48 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
49 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
50 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
51 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
52 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
53 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
54 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028016 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 Metagenome Rhizosphere
76 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
79 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
80 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
81 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
82 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
83 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
84 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
85 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
86 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
87 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
88 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
89 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
90 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
91 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
92 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
93 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
94 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
95 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
96 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
97 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
98 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
99 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
100 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
101 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
102 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
103 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
104 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
105 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
106 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
107 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
108 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
109 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
110 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
111 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
112 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
113 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
114 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
115 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
116 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
117 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
118 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
119 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
120 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
121 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
122 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
123 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
124 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
125 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
126 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
127 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
128 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
129 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
130 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
131 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
132 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
133 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
134 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
135 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
136 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.68
Metatranscriptomes 1.6
Isolates 3.72

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 25
Nodule 0
Rhizoplane 7.98
Rhizosphere 54.26
Stem 0
Stem Tuber 0
Unclassified 12.77

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25150J39212_1000140 3300002774 Bacteria 40705
2 JGI25165J46597_1000021 3300003214 Bacteria 359288
3 JGI25153J46596_10000109 3300003215 Bacteria 93661
4 rootH1_10297360 3300003323 Bacteria 3417
5 Ga0006562J51391_1090197 3300003578 Bacteria 3030
6 Ga0055526_1005309 3300003771 Bacteria 7462
7 Ga0055537_1000429 3300003773 Bacteria 27333
8 Ga0055537_1003181 3300003773 Bacteria 5133
9 Ga0055536_1000238 3300003781 Bacteria 44092
10 Ga0055536_1009419 3300003781 Bacteria 4038
11 Ga0055531_10000260 3300003794 Bacteria 55686
12 Ga0055531_10014709 3300003794 Bacteria 3505
13 Ga0065165_1001104 3300005262 Bacteria 32057
14 Ga0065165_1001128 3300005262 Bacteria 31425
15 Ga0065165_1001716 3300005262 Bacteria 21980
16 Ga0065165_1003700 3300005262 Bacteria 10366
17 Ga0065165_1024154 3300005262 Bacteria 2047
18 Ga0070666_10086430 3300005335 Bacteria 2149
19 Ga0070661_100044182 3300005344 Bacteria 3255
20 Ga0070671_100093649 3300005355 Bacteria 2518
21 Ga0070674_100000119 3300005356 Bacteria 35850
22 Ga0070673_100006085 3300005364 Bacteria 7817
23 Ga0070667_100008680 3300005367 Bacteria 8422
24 Ga0070678_100004448 3300005456 Bacteria 7956
25 Ga0070681_10029392 3300005458 Bacteria 5519
26 Ga0070681_10034776 3300005458 Bacteria 5060
27 Ga0070679_100126837 3300005530 Bacteria 2534
28 Ga0070665_100002763 3300005548 Bacteria 19025
29 Ga0068855_100004138 3300005563 Bacteria 17698
30 Ga0068854_100098380 3300005578 Bacteria 2189
31 Ga0068859_100012839 3300005617 Bacteria 8413
32 Ga0068863_100018852 3300005841 Bacteria 6603
33 Ga0068858_100000170 3300005842 Bacteria 69171
34 Ga0068860_100000734 3300005843 Bacteria 37310
35 Ga0097620_100012839 3300006931 Bacteria 8413
36 Ga0105240_10000305 3300009093 Bacteria 94979
37 Ga0105240_10015534 3300009093 Bacteria 10350
38 Ga0105240_10030085 3300009093 Bacteria 7062
39 Ga0105245_10001857 3300009098 Bacteria 19231
40 Ga0105243_10000082 3300009148 Bacteria 108252
41 Ga0105243_10020674 3300009148 Bacteria 4992
42 Ga0105243_10058694 3300009148 Bacteria 3067
43 Ga0105243_10120676 3300009148 Bacteria 2209
44 Ga0105237_10000580 3300009545 Bacteria 51217
45 Ga0105237_10010236 3300009545 Bacteria 9993
46 Ga0105238_10003147 3300009551 Bacteria 16467
47 Ga0105238_10166175 3300009551 Bacteria 2182
48 Ga0105249_10024945 3300009553 Bacteria 5379
49 Ga0105239_10000037 3300010375 Bacteria 206779
50 Ga0157370_10001411 3300013104 Bacteria 29804
51 Ga0157369_10013132 3300013105 Bacteria 9373
52 Ga0163162_10033310 3300013306 Bacteria 5119
53 Ga0207425_1000073 3300025245 Bacteria 113233
54 Ga0209129_1000435 3300025258 Bacteria 31097
55 Ga0209233_1000065 3300025261 Bacteria 387195
56 Ga0209565_1000049 3300025263 Bacteria 224447
57 Ga0209565_1000062 3300025263 Bacteria 184007
58 Ga0209673_1000458 3300025273 Bacteria 68889
59 Ga0209676_1000252 3300025292 Bacteria 113425
60 Ga0209676_1000588 3300025292 Bacteria 54210
61 Ga0209676_1000678 3300025292 Bacteria 48300
62 Ga0209676_1001102 3300025292 Bacteria 29980
63 Ga0209676_1003069 3300025292 Bacteria 10771
64 Ga0209025_1007271 3300025294 Bacteria 8318
65 Ga0209564_1002021 3300025295 Bacteria 17638
66 Ga0209564_1020111 3300025295 Bacteria 2462
67 Ga0209758_1000242 3300025297 Bacteria 113233
68 Ga0209758_1000956 3300025297 Bacteria 38990
69 Ga0209050_1000619 3300025298 Bacteria 55726
70 Ga0209257_1000060 3300025304 Bacteria 372267
71 Ga0209257_1000551 3300025304 Bacteria 64327
72 Ga0209257_1015955 3300025304 Bacteria 3076
73 Ga0207688_10036585 3300025901 Bacteria 2721
74 Ga0207707_10026799 3300025912 Bacteria 5037
75 Ga0207695_10000657 3300025913 Bacteria 68406
76 Ga0207671_10002351 3300025914 Bacteria 20357
77 Ga0207671_10127649 3300025914 Bacteria 1950
78 Ga0207649_10063582 3300025920 Bacteria 2331
79 Ga0207652_10118722 3300025921 Bacteria 2351
80 Ga0207694_10011121 3300025924 Bacteria 6796
81 Ga0207694_10046692 3300025924 Bacteria 3347
82 Ga0207709_10000507 3300025935 Bacteria 34401
83 Ga0207709_10024231 3300025935 Bacteria 3463
84 Ga0207669_10000227 3300025937 Bacteria 25670
85 Ga0207691_10107097 3300025940 Bacteria 2489
86 Ga0207661_10065339 3300025944 Bacteria 2953
87 Ga0207661_10173218 3300025944 Bacteria 1880
88 Ga0207651_10003360 3300025960 Bacteria 7849
89 Ga0207712_10020956 3300025961 Bacteria 4287
90 Ga0207640_10120160 3300025981 Bacteria 1881
91 Ga0207703_10000897 3300026035 Bacteria 29134
92 Ga0207639_10024093 3300026041 Bacteria 4401
93 Ga0207641_10001109 3300026088 Bacteria 27065
94 Ga0207648_10043443 3300026089 Bacteria 3945
95 Ga0207683_10000510 3300026121 Bacteria 35816
96 Ga0207683_10108737 3300026121 Bacteria 2481
97 Ga0265354_1000397 3300028016 Bacteria 7660
98 Ga0268266_10001249 3300028379 Bacteria 31063
99 Ga0268264_10000047 3300028381 Bacteria 349944
100 Ga0268264_10000140 3300028381 Bacteria 171592
101 Ga0265334_10010588 3300028573 Bacteria 3893
102 Ga0265338_10058546 3300028800 Bacteria 3400
103 Ga0265770_1000680 3300030878 Unclassified 4739
104 Ga0265760_10001188 3300031090 Bacteria 7619
105 Ga0265331_10002432 3300031250 Bacteria 12613
106 Ga0265331_10037552 3300031250 Bacteria 2371
107 Ga0307509_10000019 3300031507 Bacteria 256151
108 Ga0316579_10004261 3300031691 Bacteria 5666
109 Ga0316579_10005313 3300031691 Bacteria 5189
110 Ga0316576_10025906 3300031727 Bacteria 4109
111 Ga0316577_10021759 3300031733 Bacteria 3558
112 Ga0307406_10003435 3300031901 Bacteria 8621
113 Ga0307414_10013288 3300032004 Bacteria 4898
114 Ga0307414_10015131 3300032004 Bacteria 4650
115 Ga0307411_10006849 3300032005 Bacteria 5742
116 Ga0307510_10000103 3300033180 Bacteria 66493
117 Ga0316582_0013093 3300036647 Bacteria 4657
118 Ga0316584_0018674 3300036712 Bacteria 5004
119 Ga0316584_0151094 3300036712 Bacteria 1728
120 Ga0466963_0001993 3300044694 Bacteria 11204
121 Ga0466970_0000092 3300044765 Bacteria 38213
122 Ga0466959_0003213 3300045049 Bacteria 10629
123 Ga0466958_0006273 3300045836 Bacteria 6459
124 Ga0466967_0008125 3300045976 Bacteria 7658
125 Ga0495627_001210 3300046453 Bacteria 16166
126 Ga0495638_0004902 3300046460 Bacteria 10060
127 Ga0495650_0001187 3300046471 Bacteria 27632
128 Ga0495610_0000451 3300046512 Bacteria 42520
129 Ga0495620_0001931 3300046515 Bacteria 12147
130 Ga0495654_0034816 3300046530 Bacteria 2539
131 Ga0495625_0000060 3300046660 Bacteria 179425
132 Ga0495625_0065528 3300046660 Bacteria 2560
133 Ga0495649_0000092 3300046694 Bacteria 77734
134 Ga0495649_0000608 3300046694 Bacteria 29843
135 Ga0495681_0001722 3300047470 Bacteria 16166
136 Ga0495686_0000088 3300047472 Bacteria 195862
137 Ga0495686_0000476 3300047472 Bacteria 59699
138 Ga0496104_0082292 3300048907 Bacteria 3070
139 Ga0496104_0140382 3300048907 Bacteria 2321
140 Ga0496105_0047120 3300048908 Bacteria 3557
141 Ga0496105_0163115 3300048908 Bacteria 1829
142 Ga0496107_0000233 3300048910 Bacteria 29403
143 Ga0496108_0082974 3300048911 Bacteria 2718
144 Ga0496109_0027498 3300048912 Bacteria 5079
145 Ga0496109_0053163 3300048912 Bacteria 3693
146 Ga0496109_0232821 3300048912 Bacteria 1733
147 Ga0496110_0018561 3300048913 Bacteria 5833
148 Ga0496110_0098619 3300048913 Bacteria 2619
149 Ga0496114_0006421 3300048917 Bacteria 9258
150 Ga0496115_0000231 3300048918 Bacteria 50772
151 Ga0496115_0000654 3300048918 Bacteria 25844
152 Ga0496115_0004194 3300048918 Bacteria 10419
153 Ga0496116_0016470 3300048919 Bacteria 5781
154 Ga0496117_0000125 3300048920 Bacteria 168885
155 Ga0496118_0000016 3300048921 Bacteria 549586
156 Ga0496119_0019938 3300048922 Bacteria 4912
157 Ga0496120_0020600 3300048923 Bacteria 4184
158 Ga0496121_0000066 3300048924 Bacteria 267065
159 Ga0496121_0001240 3300048924 Bacteria 44324
160 Ga0496121_0002687 3300048924 Bacteria 26590
161 Ga0496121_0003128 3300048924 Bacteria 23902
162 Ga0496121_0006647 3300048924 Bacteria 14236
163 Ga0496121_0086314 3300048924 Bacteria 2466
164 Ga0496122_0013053 3300048925 Bacteria 8181
165 Ga0496123_0003619 3300048926 Bacteria 17115
166 Ga0496125_0004555 3300048928 Bacteria 15900
167 Ga0496126_0064646 3300048929 Bacteria 3276
168 Ga0496126_0090703 3300048929 Bacteria 2688
169 Ga0501047_0019271 3300049581 Bacteria 6546
170 Ga0500583_0000207 3300053092 Bacteria 22404
171 Ga0500658_0001272 3300053134 Bacteria 10229
172 Ga0500658_0007873 3300053134 Bacteria 3938
173 Ga0500559_0000007 3300053136 Bacteria 226236
174 Ga0500559_0003791 3300053136 Bacteria 7326
175 Ga0500568_0012265 3300053139 Bacteria 3948
176 Ga0500616_0000016 3300053153 Bacteria 627087
177 Ga0500622_0003348 3300053156 Bacteria 10800
178 Ga0500627_0000002 3300053158 Bacteria 235747
179 Ga0500637_0038930 3300053178 Bacteria 2680
180 Ga0500645_001194 3300053730 Bacteria 13805
181 Ga0500596_000455 3300053735 Bacteria 7604

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048912 Ga0496109_0232821 Ga0496109_0232821_22_1488 465
2 3300048929 Ga0496126_0090703 Ga0496126_0090703_39_1484 481
3 3300046694 Ga0495649_0000608 Ga0495649_0000608_16474_18024 514
4 3300013105 Ga0157369_10013132 Ga0157369_100131324 515
5 3300053136 Ga0500559_0003791 Ga0500559_0003791_28_1581 516
6 iso_pu_bacteria 2885429604 2885431038 518
7 3300005262 Ga0065165_1024154 Ga0065165_10241542 519
8 3300033180 Ga0307510_10000103 Ga0307510_100001035 520
9 3300048919 Ga0496116_0016470 Ga0496116_0016470_1521_3086 520
10 3300048920 Ga0496117_0000125 Ga0496117_0000125_60386_61951 520
11 3300048921 Ga0496118_0000016 Ga0496118_0000016_133755_135320 520
12 3300048922 Ga0496119_0019938 Ga0496119_0019938_1237_2802 520
13 3300048923 Ga0496120_0020600 Ga0496120_0020600_1510_3075 520
14 3300048924 Ga0496121_0086314 Ga0496121_0086314_106_1671 520
15 3300048928 Ga0496125_0004555 Ga0496125_0004555_191_1756 520
16 3300048929 Ga0496126_0064646 Ga0496126_0064646_681_2246 520
17 3300025292 Ga0209676_1003069 Ga0209676_100306910 521
18 iso_pu_bacteria 2852653556 2852653754 521
19 3300046530 Ga0495654_0034816 Ga0495654_0034816_41_1612 522
20 3300053134 Ga0500658_0007873 Ga0500658_0007873_889_2460 522
21 3300053158 Ga0500627_0000002 Ga0500627_0000002_8709_10280 522
22 3300009093 Ga0105240_10000305 Ga0105240_1000030510 523
23 3300009093 Ga0105240_10030085 Ga0105240_100300853 523
24 3300010375 Ga0105239_10000037 Ga0105239_1000003795 523
25 3300025913 Ga0207695_10000657 Ga0207695_1000065710 523
26 3300032004 Ga0307414_10013288 Ga0307414_100132883 523
27 3300046453 Ga0495627_001210 Ga0495627_001210_7417_9009 523
28 3300046471 Ga0495650_0001187 Ga0495650_0001187_7417_9009 523
29 3300046512 Ga0495610_0000451 Ga0495610_0000451_7157_8749 523
30 3300046515 Ga0495620_0001931 Ga0495620_0001931_10002_11594 523
31 3300047470 Ga0495681_0001722 Ga0495681_0001722_7158_8750 523
32 3300048924 Ga0496121_0000066 Ga0496121_0000066_100455_102035 523
33 3300053136 Ga0500559_0000007 Ga0500559_0000007_215002_216573 523
34 iso_pu_bacteria 2830075706 2830077579 523
35 3300032004 Ga0307414_10015131 Ga0307414_100151312 524
36 3300032005 Ga0307411_10006849 Ga0307411_100068494 524
37 3300046694 Ga0495649_0000092 Ga0495649_0000092_60371_61945 524
38 3300053156 Ga0500622_0003348 Ga0500622_0003348_7196_8773 524
39 3300003781 Ga0055536_1009419 Ga0055536_10094192 525
40 3300005262 Ga0065165_1001716 Ga0065165_100171613 525
41 3300005841 Ga0068863_100018852 Ga0068863_1000188522 525
42 3300005843 Ga0068860_100000734 Ga0068860_10000073414 525
43 3300013306 Ga0163162_10033310 Ga0163162_100333103 525
44 3300025292 Ga0209676_1000678 Ga0209676_100067824 525
45 3300025914 Ga0207671_10127649 Ga0207671_101276491 525
46 3300025924 Ga0207694_10046692 Ga0207694_100466922 525
47 3300026088 Ga0207641_10001109 Ga0207641_1000110911 525
48 3300028381 Ga0268264_10000047 Ga0268264_10000047124 525
49 3300028381 Ga0268264_10000140 Ga0268264_10000140123 525
50 3300046660 Ga0495625_0000060 Ga0495625_0000060_61567_63147 525
51 3300048908 Ga0496105_0163115 Ga0496105_0163115_15_1661 525
52 3300005335 Ga0070666_10086430 Ga0070666_100864302 526
53 3300005617 Ga0068859_100012839 Ga0068859_1000128392 526
54 3300006931 Ga0097620_100012839 Ga0097620_1000128395 526
55 iso_pu_bacteria 2643221699 2644548466 526
56 3300005262 Ga0065165_1003700 Ga0065165_10037005 527
57 3300009553 Ga0105249_10024945 Ga0105249_100249453 527
58 3300025292 Ga0209676_1001102 Ga0209676_100110210 527
59 3300025961 Ga0207712_10020956 Ga0207712_100209563 527
60 3300028800 Ga0265338_10058546 Ga0265338_100585462 527
61 3300031250 Ga0265331_10037552 Ga0265331_100375522 527
62 3300046460 Ga0495638_0004902 Ga0495638_0004902_5843_7435 527
63 3300005262 Ga0065165_1001128 Ga0065165_10011286 528
64 3300048918 Ga0496115_0000654 Ga0496115_0000654_4537_6138 528
65 3300053730 Ga0500645_001194 Ga0500645_001194_7236_8825 528
66 3300003578 Ga0006562J51391_1090197 Ga0006562J51391_10901973 529
67 3300003781 Ga0055536_1000238 Ga0055536_100023812 529
68 3300003794 Ga0055531_10014709 Ga0055531_100147092 529
69 3300025292 Ga0209676_1000252 Ga0209676_100025261 529
70 3300025304 Ga0209257_1000060 Ga0209257_1000060279 529
71 3300025944 Ga0207661_10173218 Ga0207661_101732181 529
72 3300031691 Ga0316579_10004261 Ga0316579_100042615 529
73 3300031691 Ga0316579_10005313 Ga0316579_100053133 529
74 3300031727 Ga0316576_10025906 Ga0316576_100259063 529
75 3300031733 Ga0316577_10021759 Ga0316577_100217595 529
76 3300031901 Ga0307406_10003435 Ga0307406_100034355 529
77 3300036712 Ga0316584_0018674 Ga0316584_0018674_2068_3726 529
78 3300044694 Ga0466963_0001993 Ga0466963_0001993_2081_3673 529
79 3300044765 Ga0466970_0000092 Ga0466970_0000092_24267_25859 529
80 3300045836 Ga0466958_0006273 Ga0466958_0006273_2678_4270 529
81 3300045976 Ga0466967_0008125 Ga0466967_0008125_2014_3606 529
82 3300048908 Ga0496105_0047120 Ga0496105_0047120_1565_3223 529
83 3300048912 Ga0496109_0027498 Ga0496109_0027498_1832_3490 529
84 3300048925 Ga0496122_0013053 Ga0496122_0013053_1716_3305 529
85 3300048926 Ga0496123_0003619 Ga0496123_0003619_5284_6873 529
86 iso_pu_bacteria 2643221562 2643831090 529
87 3300003323 rootH1_10297360 rootH1_102973602 530
88 3300005458 Ga0070681_10034776 Ga0070681_100347763 530
89 3300025944 Ga0207661_10065339 Ga0207661_100653392 530
90 3300028016 Ga0265354_1000397 Ga0265354_10003974 530
91 3300028573 Ga0265334_10010588 Ga0265334_100105883 530
92 3300030878 Ga0265770_1000680 Ga0265770_10006802 530
93 3300031090 Ga0265760_10001188 Ga0265760_100011882 530
94 3300031250 Ga0265331_10002432 Ga0265331_100024326 530
95 3300048924 Ga0496121_0002687 Ga0496121_0002687_9383_10978 530
96 3300005458 Ga0070681_10029392 Ga0070681_100293923 531
97 3300005530 Ga0070679_100126837 Ga0070679_1001268372 531
98 3300009551 Ga0105238_10166175 Ga0105238_101661751 531
99 3300025912 Ga0207707_10026799 Ga0207707_100267993 531
100 iso_pu_bacteria 2643221545 2643747779 531
101 iso_pu_bacteria 2643221691 2644510403 531
102 3300005548 Ga0070665_100002763 Ga0070665_10000276314 532
103 3300005563 Ga0068855_100004138 Ga0068855_1000041385 532
104 3300009093 Ga0105240_10015534 Ga0105240_100155342 532
105 3300009545 Ga0105237_10010236 Ga0105237_100102362 532
106 3300028379 Ga0268266_10001249 Ga0268266_100012493 532
107 3300053139 Ga0500568_0012265 Ga0500568_0012265_792_2414 532
108 3300053153 Ga0500616_0000016 Ga0500616_0000016_360725_362326 532
109 3300053735 Ga0500596_000455 Ga0500596_000455_1217_2884 532
110 3300009148 Ga0105243_10120676 Ga0105243_101206761 533
111 3300009551 Ga0105238_10003147 Ga0105238_100031479 533
112 3300013104 Ga0157370_10001411 Ga0157370_100014117 533
113 3300025924 Ga0207694_10011121 Ga0207694_100111212 533
114 3300036647 Ga0316582_0013093 Ga0316582_0013093_909_2579 533
115 3300036712 Ga0316584_0151094 Ga0316584_0151094_33_1703 533
116 3300045049 Ga0466959_0003213 Ga0466959_0003213_2837_4441 533
117 3300048911 Ga0496108_0082974 Ga0496108_0082974_660_2330 533
118 3300048913 Ga0496110_0018561 Ga0496110_0018561_1042_2712 533
119 3300049581 Ga0501047_0019271 Ga0501047_0019271_1186_2787 533
120 3300005356 Ga0070674_100000119 Ga0070674_10000011920 534
121 3300005364 Ga0070673_100006085 Ga0070673_1000060852 534
122 3300005456 Ga0070678_100004448 Ga0070678_1000044483 534
123 3300009148 Ga0105243_10000082 Ga0105243_1000008212 534
124 3300025935 Ga0207709_10000507 Ga0207709_1000050712 534
125 3300025937 Ga0207669_10000227 Ga0207669_100002277 534
126 3300025960 Ga0207651_10003360 Ga0207651_100033602 534
127 3300026089 Ga0207648_10043443 Ga0207648_100434432 534
128 3300026121 Ga0207683_10000510 Ga0207683_1000051019 534
129 3300047472 Ga0495686_0000088 Ga0495686_0000088_58849_60453 534
130 3300048907 Ga0496104_0140382 Ga0496104_0140382_252_1925 534
131 3300048912 Ga0496109_0053163 Ga0496109_0053163_912_2585 534
132 3300003214 JGI25165J46597_1000021 JGI25165J46597_100002198 535
133 3300003771 Ga0055526_1005309 Ga0055526_10053094 535
134 3300003773 Ga0055537_1000429 Ga0055537_100042926 535
135 3300003773 Ga0055537_1003181 Ga0055537_10031812 535
136 3300005262 Ga0065165_1001104 Ga0065165_100110415 535
137 3300005344 Ga0070661_100044182 Ga0070661_1000441822 535
138 3300005842 Ga0068858_100000170 Ga0068858_1000001705 535
139 3300009098 Ga0105245_10001857 Ga0105245_1000185711 535
140 3300009148 Ga0105243_10020674 Ga0105243_100206743 535
141 3300025261 Ga0209233_1000065 Ga0209233_100006599 535
142 3300025263 Ga0209565_1000049 Ga0209565_100004912 535
143 3300025263 Ga0209565_1000062 Ga0209565_100006296 535
144 3300025273 Ga0209673_1000458 Ga0209673_100045826 535
145 3300025295 Ga0209564_1002021 Ga0209564_100202113 535
146 3300025295 Ga0209564_1020111 Ga0209564_10201112 535
147 3300025297 Ga0209758_1000956 Ga0209758_100095621 535
148 3300025304 Ga0209257_1015955 Ga0209257_10159552 535
149 3300025920 Ga0207649_10063582 Ga0207649_100635823 535
150 3300025921 Ga0207652_10118722 Ga0207652_101187222 535
151 3300025935 Ga0207709_10024231 Ga0207709_100242312 535
152 3300026035 Ga0207703_10000897 Ga0207703_100008975 535
153 3300026041 Ga0207639_10024093 Ga0207639_100240932 535
154 3300046660 Ga0495625_0065528 Ga0495625_0065528_889_2496 535
155 3300047472 Ga0495686_0000476 Ga0495686_0000476_46058_47665 535
156 3300048910 Ga0496107_0000233 Ga0496107_0000233_26235_27842 535
157 3300048918 Ga0496115_0000231 Ga0496115_0000231_28590_30200 535
158 3300048918 Ga0496115_0004194 Ga0496115_0004194_7899_9506 535
159 3300048924 Ga0496121_0003128 Ga0496121_0003128_5887_7494 535
160 3300048924 Ga0496121_0006647 Ga0496121_0006647_7395_9002 535
161 3300053134 Ga0500658_0001272 Ga0500658_0001272_1835_3442 535
162 3300048917 Ga0496114_0006421 Ga0496114_0006421_1910_3613 536
163 3300053092 Ga0500583_0000207 Ga0500583_0000207_19266_20879 536
164 3300031507 Ga0307509_10000019 Ga0307509_10000019134 538
165 3300053178 Ga0500637_0038930 Ga0500637_0038930_134_1753 538
166 3300005578 Ga0068854_100098380 Ga0068854_1000983802 540
167 3300009545 Ga0105237_10000580 Ga0105237_1000058011 540
168 3300025914 Ga0207671_10002351 Ga0207671_100023514 540
169 3300025981 Ga0207640_10120160 Ga0207640_101201602 540
170 3300048913 Ga0496110_0098619 Ga0496110_0098619_122_1813 540
171 3300005367 Ga0070667_100008680 Ga0070667_1000086806 541
172 3300009148 Ga0105243_10058694 Ga0105243_100586943 541
173 3300025901 Ga0207688_10036585 Ga0207688_100365852 541
174 3300025940 Ga0207691_10107097 Ga0207691_101070972 541
175 3300026121 Ga0207683_10108737 Ga0207683_101087372 541
176 3300048907 Ga0496104_0082292 Ga0496104_0082292_848_2542 541
177 3300048924 Ga0496121_0001240 Ga0496121_0001240_2506_4134 541
178 3300005355 Ga0070671_100093649 Ga0070671_1000936492 548
179 3300002774 JGI25150J39212_1000140 JGI25150J39212_10001407 551
180 3300003215 JGI25153J46596_10000109 JGI25153J46596_100001097 551
181 3300003794 Ga0055531_10000260 Ga0055531_1000026030 551
182 3300025245 Ga0207425_1000073 Ga0207425_100007399 551
183 3300025258 Ga0209129_1000435 Ga0209129_100043519 551
184 3300025292 Ga0209676_1000588 Ga0209676_100058827 551
185 3300025294 Ga0209025_1007271 Ga0209025_10072713 551
186 3300025297 Ga0209758_1000242 Ga0209758_100024299 551
187 3300025298 Ga0209050_1000619 Ga0209050_100061925 551
188 3300025304 Ga0209257_1000551 Ga0209257_100055130 551

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13193

AMP-binding_C

AMP-binding enzyme C-terminal domain

478

553

0.97

PF00501

AMP-binding

AMP-binding enzyme

51

430

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
1ult-assembly1.cif.gz_B crystal structure of tt0168 from thermus thermophilus hb8 0.9083 16 540
6ijb-assembly1.cif.gz_B structure of 3-methylmercaptopropionate coa ligase mutant k523a in complex with amp and mmpa 0.9037 14 541
3ivr-assembly1.cif.gz_B crystal structure of putative long-chain-fatty-acid coa ligase from rhodopseudomonas palustris cga009 0.8999 23 437
1ult-assembly1.cif.gz_B crystal structure of tt0168 from thermus thermophilus hb8 0.893 16 540
5bus-assembly1.cif.gz_A o-succinylbenzoate coenzyme a synthetase (mene) from bacillus subtilis, in complex with amp 0.8917 27 535
ID Description Score Start End Superfamily
af_O53406_1_431_3.40.50.12780 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;ANL, N-terminal domain 0.9466 16 437 3.40.50.12780
af_P38137_433_538_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.939 439 542 3.30.300.30
af_Q2G2V3_396_492_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9355 440 534 3.30.300.30
af_P31552_422_517_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9334 441 534 3.30.300.30
af_Q2G0K3_358_454_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9299 443 538 3.30.300.30
ID Description Score Start End GO Terms
AF-A0A4Q5LAQ3-F1-model_v4 Long-chain-fatty-acid--CoA ligase 0.9509 14 538 GO:0016877
AF-A0A2E4XRB8-F1-model_v4 AMP-binding enzyme C-terminal domain-containing protein 0.9507 443 537 GO:0006631
GO:0031956
AF-A0A7V7XCA2-F1-model_v4 deleted 0.9466 14 543
AF-A0A661HC34-F1-model_v4 Long-chain fatty acid--CoA ligase 0.9465 17 538 GO:0016877
AF-A0A853H254-F1-model_v4 Long-chain-fatty-acid--CoA ligase 0.9322 14 540 GO:0016877

Feature Viewer

pLDDT pTM Quality
88.75 0.79 High
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Predicted Structure (AlphaFold2)

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