F288423

General Info

Members Datasets Scaffolds Average Seq Length
187 126 374 280

Family's Representative Sequence

Representative Sequence 3300050496|nmdc:mga07m45_51746_c1|nmdc:mga07m45_51746_c1_829_1806
Length 318
Sequence MTTAKLASEASVVMASGSSSRGLDCSVRHVYECPMRWADLDMLGHVNNVTYVDYLQEARVDMLRIHGSHGHGASYQQGDLAEGVVVVRHEVTYLRPLRFNFESVLIECWVTDIRAASFTIAYEIFRESRSRPGERTVFARATTVLTPFVFAEERPRRISPEERTRLEQFLEPGERRPVPRSFGHFPVHVRFSDVDVYGHVNNVKYFEYFQEARLLFITNRLMAEVPEELGLPSFVIAQTDVDYKAPILFRAEPYDCWSRVSRVGSRSFTQEAEIRDGDTLLARAVVTVVFVDPETGRSAEPPEEYREPLRAAHARGVT

Samples

Sample ID Description Type Environment
1 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
4 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
5 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
6 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
7 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
8 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
9 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
10 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
11 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
12 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
13 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
14 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
15 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
16 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
17 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
18 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
19 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
20 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
21 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
22 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
23 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
24 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
25 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
26 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
27 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
28 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
29 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
30 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
31 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
32 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
33 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
34 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
35 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
52 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
53 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
54 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
55 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
56 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
57 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
58 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
59 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
60 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
61 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
62 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
63 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
64 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
65 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
66 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
67 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
68 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
69 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
70 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
71 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
72 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
73 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
74 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
75 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
76 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
77 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
78 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
79 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
80 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
81 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
82 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
83 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
84 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
85 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
86 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
88 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
89 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
90 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
91 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
92 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
93 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
94 3300049656 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_B_0_drought Metagenome Rhizosphere
95 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
96 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
97 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
98 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
99 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
100 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
101 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
102 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
103 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
104 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
105 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
106 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
107 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
108 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
109 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
110 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
111 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
112 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
113 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
114 2643221561 Nocardioides sp. Root151 Isolate Unclassified
115 2643221604 Nocardioides sp. Root190 Isolate Unclassified
116 2643221615 Nocardioides sp. Root224 Isolate Unclassified
117 2643221641 Nocardioides sp. Root122 Isolate Unclassified
118 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
119 2643221696 Nocardioides sp. Root140 Isolate Unclassified
120 2739367898 Nocardioides sp. CF479 Isolate Unclassified
121 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
122 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
123 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
124 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
125 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
126 8054609563 Nocardioides astragali CGMCC 4.7327 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 93.05
Metatranscriptomes 0
Isolates 6.95

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 19.79
Nodule 0.53
Rhizoplane 5.35
Rhizosphere 65.78
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga07m45_51746_c1 3300050496 Bacteria 2317
2 Ga0070683_100027026 3300005329 Bacteria 5173
3 Ga0068868_100030161 3300005338 Bacteria 4158
4 Ga0070660_100166794 3300005339 Bacteria 1777
5 Ga0070687_100054610 3300005343 Bacteria 2082
6 Ga0070692_10145282 3300005345 Bacteria 1346
7 Ga0070674_100007154 3300005356 Bacteria 6563
8 Ga0070701_10020319 3300005438 Bacteria 3152
9 Ga0070700_100141080 3300005441 Bacteria 1637
10 Ga0070700_100233399 3300005441 Bacteria 1311
11 Ga0068867_100010964 3300005459 Bacteria 6392
12 Ga0070684_100036648 3300005535 Bacteria 4203
13 Ga0070672_100021595 3300005543 Bacteria 4714
14 Ga0068856_100427140 3300005614 Bacteria 1345
15 Ga0068852_100267784 3300005616 Bacteria 1643
16 Ga0068861_100006626 3300005719 Bacteria 7903
17 Ga0081539_10065570 3300005985 Bacteria 1971
18 Ga0075365_10002950 3300006038 Bacteria 8600
19 Ga0075365_10017429 3300006038 Bacteria 4394
20 Ga0075365_10036680 3300006038 Bacteria 3178
21 Ga0075365_10174736 3300006038 Bacteria 1500
22 Ga0075368_10000320 3300006042 Bacteria 14097
23 Ga0075368_10070329 3300006042 Bacteria 1412
24 Ga0075363_100003318 3300006048 Bacteria 6823
25 Ga0075363_100217812 3300006048 Bacteria 1094
26 Ga0075364_10018958 3300006051 Bacteria 4315
27 Ga0075364_10053844 3300006051 Bacteria 2631
28 Ga0075364_10262202 3300006051 Bacteria 1175
29 Ga0075367_10008997 3300006178 Bacteria 5199
30 Ga0075367_10052188 3300006178 Bacteria 2419
31 Ga0075367_10089561 3300006178 Bacteria 1871
32 Ga0075370_10004906 3300006353 Bacteria 6570
33 Ga0075370_10005545 3300006353 Bacteria 6286
34 Ga0068865_100030575 3300006881 Bacteria 3583
35 Ga0111539_10058452 3300009094 Bacteria 4575
36 Ga0105245_10018059 3300009098 Bacteria 6163
37 Ga0105243_10017742 3300009148 Bacteria 5384
38 Ga0105243_10819158 3300009148 Bacteria 919
39 Ga0105242_10474405 3300009176 Bacteria 1184
40 Ga0105248_10055472 3300009177 Bacteria 4445
41 Ga0105237_10396759 3300009545 Bacteria 1384
42 Ga0105246_10056736 3300011119 Bacteria 2708
43 Ga0157372_10477274 3300013307 Bacteria 1454
44 Ga0157375_10107426 3300013308 Bacteria 2884
45 Ga0163161_10164491 3300017792 Bacteria 1693
46 Ga0213875_10025503 3300021388 Bacteria 2817
47 Ga0207688_10007633 3300025901 Bacteria 5889
48 Ga0207643_10023076 3300025908 Bacteria 3430
49 Ga0207659_10116255 3300025926 Bacteria 2042
50 Ga0207690_10110805 3300025932 Bacteria 1977
51 Ga0207706_10531407 3300025933 Bacteria 1013
52 Ga0207709_10006562 3300025935 Bacteria 6531
53 Ga0207704_10060955 3300025938 Bacteria 2337
54 Ga0207691_10017080 3300025940 Bacteria 6884
55 Ga0207661_10302883 3300025944 Bacteria 1433
56 Ga0207668_10426782 3300025972 Bacteria 1126
57 Ga0207677_10076496 3300026023 Bacteria 2383
58 Ga0207639_10183107 3300026041 Bacteria 1783
59 Ga0207708_10001774 3300026075 Bacteria 15924
60 Ga0207708_10014594 3300026075 Bacteria 5878
61 Ga0207648_10064429 3300026089 Bacteria 3194
62 Ga0207676_10289759 3300026095 Bacteria 1490
63 Ga0207675_100005325 3300026118 Bacteria 12359
64 Ga0307413_10548014 3300031824 Bacteria 938
65 Ga0307410_10122177 3300031852 Bacteria 1901
66 Ga0307409_100185945 3300031995 Bacteria 1844
67 Ga0307409_100232022 3300031995 Bacteria 1674
68 Ga0307416_100418802 3300032002 Bacteria 1383
69 Ga0395898_0030897 3300037466 Bacteria 5357
70 Ga0395905_0037200 3300037471 Bacteria 4571
71 Ga0436364_1112259 3300037853 Bacteria 3457
72 Ga0395901_0043236 3300038443 Bacteria 4674
73 Ga0451853_1911615 3300041512 Bacteria 1071
74 Ga0451853_2500309 3300041512 Bacteria 2190
75 Ga0466969_0028283 3300044656 Bacteria 2866
76 Ga0466972_0038920 3300044658 Bacteria 2322
77 Ga0466972_0302599 3300044658 Bacteria 747
78 Ga0466965_0023967 3300044683 Bacteria 2950
79 Ga0466965_0066645 3300044683 Bacteria 1806
80 Ga0466961_0007932 3300044693 Bacteria 6765
81 Ga0466961_0040102 3300044693 Bacteria 3002
82 Ga0466961_0101307 3300044693 Bacteria 1814
83 Ga0466961_0181507 3300044693 Bacteria 1307
84 Ga0466963_0005989 3300044694 Bacteria 7165
85 Ga0466963_0340268 3300044694 Bacteria 1056
86 Ga0466971_0053021 3300044719 Bacteria 1827
87 Ga0466971_0152772 3300044719 Bacteria 1078
88 Ga0466970_0010839 3300044765 Bacteria 4635
89 Ga0466970_0018180 3300044765 Bacteria 3637
90 Ga0466970_0039682 3300044765 Bacteria 2499
91 Ga0466970_0155977 3300044765 Bacteria 1262
92 Ga0466970_0194716 3300044765 Bacteria 1127
93 Ga0466957_0009332 3300044842 Bacteria 5598
94 Ga0466957_0058479 3300044842 Bacteria 2362
95 Ga0466957_0129437 3300044842 Bacteria 1616
96 Ga0466960_0002760 3300044901 Bacteria 6648
97 Ga0466960_0010308 3300044901 Bacteria 3879
98 Ga0466960_0046258 3300044901 Bacteria 2083
99 Ga0466960_0116071 3300044901 Bacteria 1396
100 Ga0466959_0004597 3300045049 Bacteria 9267
101 Ga0466967_0037143 3300045976 Bacteria 4165
102 Ga0466967_0127049 3300045976 Bacteria 2363
103 Ga0466967_0152513 3300045976 Bacteria 2161
104 Ga0495672_0184014 3300047320 Bacteria 1056
105 Ga0496101_0137583 3300048904 Bacteria 1860
106 Ga0496102_0150856 3300048905 Bacteria 2184
107 Ga0496107_0051321 3300048910 Bacteria 2975
108 Ga0496108_0032797 3300048911 Bacteria 4313
109 Ga0496108_0170160 3300048911 Bacteria 1885
110 Ga0496109_0041281 3300048912 Bacteria 4180
111 Ga0496109_0056148 3300048912 Bacteria 3593
112 Ga0496110_0072304 3300048913 Bacteria 3060
113 Ga0496114_0199806 3300048917 Bacteria 1751
114 Ga0496114_0309859 3300048917 Bacteria 1394
115 Ga0501031_0128880 3300049568 Bacteria 1652
116 Ga0501032_0188091 3300049569 Bacteria 1350
117 Ga0501032_0247829 3300049569 Bacteria 1157
118 Ga0501036_0003141 3300049572 Bacteria 13174
119 Ga0501036_0196818 3300049572 Bacteria 1695
120 Ga0501038_0007635 3300049574 Bacteria 9973
121 Ga0501038_0166610 3300049574 Bacteria 1787
122 Ga0501038_0189129 3300049574 Bacteria 1657
123 Ga0501039_0045225 3300049575 Bacteria 3401
124 Ga0501039_0111151 3300049575 Bacteria 2142
125 Ga0501039_0449451 3300049575 Bacteria 1012
126 Ga0501040_0051468 3300049576 Bacteria 2817
127 Ga0501040_0156250 3300049576 Bacteria 1611
128 Ga0501042_0147283 3300049578 Bacteria 1697
129 Ga0501046_0000188 3300049580 Bacteria 63345
130 Ga0501067_0044611 3300049583 Bacteria 2463
131 Ga0501067_0072365 3300049583 Bacteria 1910
132 Ga0501071_0016901 3300049587 Bacteria 5020
133 Ga0501071_0029247 3300049587 Bacteria 3888
134 Ga0501071_0213712 3300049587 Bacteria 1451
135 Ga0501072_0014094 3300049588 Bacteria 6127
136 Ga0501072_0042192 3300049588 Bacteria 3584
137 Ga0501073_0022371 3300049589 Bacteria 4553
138 Ga0501074_0204699 3300049590 Bacteria 1406
139 Ga0501075_0030366 3300049591 Bacteria 4003
140 Ga0501076_0008867 3300049592 Bacteria 7397
141 Ga0501076_0310016 3300049592 Bacteria 1294
142 Ga0501209_037617 3300049656 Bacteria 1264
143 Ga0501079_0017057 3300049741 Bacteria 5546
144 Ga0501080_0030500 3300049742 Bacteria 5023
145 Ga0501080_0296245 3300049742 Bacteria 1468
146 Ga0501081_0016802 3300049743 Bacteria 4839
147 Ga0501081_0127560 3300049743 Bacteria 1816
148 Ga0501083_0068936 3300049744 Bacteria 2354
149 Ga0501035_0096637 3300049822 Bacteria 2595
150 Ga0501035_0313680 3300049822 Bacteria 1319
151 nmdc:mga03n38_3658_c1 3300050490 Bacteria 4972
152 nmdc:mga00v17_106583_c1 3300050491 Bacteria 1774
153 nmdc:mga00v17_14566_c1 3300050491 Bacteria 4394
154 nmdc:mga00v17_276664_c1 3300050491 Bacteria 1090
155 nmdc:mga00v17_304452_c1 3300050491 Bacteria 1035
156 nmdc:mga00v17_52316_c1 3300050491 Bacteria 2484
157 nmdc:mga0yw44_14549_c1 3300050492 Bacteria 4182
158 nmdc:mga0yw44_30428_c1 3300050492 Bacteria 3128
159 nmdc:mga0yw44_341118_c1 3300050492 Bacteria 1008
160 nmdc:mga0yw44_486801_c1 3300050492 Bacteria 837
161 nmdc:mga0yw44_85353_c1 3300050492 Bacteria 1986
162 nmdc:mga0yw44_96101_c1 3300050492 Bacteria 1880
163 nmdc:mga06z11_12940_c1 3300050494 Bacteria 3645
164 nmdc:mga06z11_18911_c1 3300050494 Bacteria 3156
165 nmdc:mga04h51_2445_c1 3300050495 Bacteria 4411
166 nmdc:mga08y16_28629_c1 3300050511 Bacteria 5873
167 Ga0500644_0000200 3300053088 Bacteria 36398
168 Ga0500556_0002387 3300053104 Bacteria 6067
169 Ga0500593_000126 3300053117 Bacteria 30241
170 Ga0500568_0097923 3300053139 Bacteria 1102
171 Ga0500573_0184136 3300053140 Bacteria 1120
172 Ga0501084_0065147 3300054114 Bacteria 3048
173 Ga0501082_0296671 3300060353 Bacteria 1407
174 Ga0466962_0054089 3300061719 Bacteria 1918
175 2643828071 2643221561 Bacteria 4984412
176 2644033953 2643221604 Bacteria 5014917
177 2644091829 2643221615 Bacteria 5487866
178 2644231271 2643221641 Bacteria 4490190
179 2644321632 2643221657 Bacteria 5490246
180 2644531161 2643221696 Bacteria 5431823
181 2740166598 2739367898 Bacteria 4367674
182 2774394368 2773857762 Bacteria 5971770
183 2809194773 2808606439 Bacteria 5952208
184 2812352979 2811994878 Bacteria 5992952
185 2855387412 2855386786 Bacteria 4752232
186 2891972749 2891968417 Bacteria 5821697
187 8054612327 8054609563 Bacteria 5170090
188 nmdc:mga07m45_51746_c1
189 Ga0070683_100027026
190 Ga0068868_100030161
191 Ga0070660_100166794
192 Ga0070687_100054610
193 Ga0070692_10145282
194 Ga0070674_100007154
195 Ga0070701_10020319
196 Ga0070700_100141080
197 Ga0070700_100233399
198 Ga0068867_100010964
199 Ga0070684_100036648
200 Ga0070672_100021595
201 Ga0068856_100427140
202 Ga0068852_100267784
203 Ga0068861_100006626
204 Ga0081539_10065570
205 Ga0075365_10002950
206 Ga0075365_10017429
207 Ga0075365_10036680
208 Ga0075365_10174736
209 Ga0075368_10000320
210 Ga0075368_10070329
211 Ga0075363_100003318
212 Ga0075363_100217812
213 Ga0075364_10018958
214 Ga0075364_10053844
215 Ga0075364_10262202
216 Ga0075367_10008997
217 Ga0075367_10052188
218 Ga0075367_10089561
219 Ga0075370_10004906
220 Ga0075370_10005545
221 Ga0068865_100030575
222 Ga0111539_10058452
223 Ga0105245_10018059
224 Ga0105243_10017742
225 Ga0105243_10819158
226 Ga0105242_10474405
227 Ga0105248_10055472
228 Ga0105237_10396759
229 Ga0105246_10056736
230 Ga0157372_10477274
231 Ga0157375_10107426
232 Ga0163161_10164491
233 Ga0213875_10025503
234 Ga0207688_10007633
235 Ga0207643_10023076
236 Ga0207659_10116255
237 Ga0207690_10110805
238 Ga0207706_10531407
239 Ga0207709_10006562
240 Ga0207704_10060955
241 Ga0207691_10017080
242 Ga0207661_10302883
243 Ga0207668_10426782
244 Ga0207677_10076496
245 Ga0207639_10183107
246 Ga0207708_10001774
247 Ga0207708_10014594
248 Ga0207648_10064429
249 Ga0207676_10289759
250 Ga0207675_100005325
251 Ga0307413_10548014
252 Ga0307410_10122177
253 Ga0307409_100185945
254 Ga0307409_100232022
255 Ga0307416_100418802
256 Ga0395898_0030897
257 Ga0395905_0037200
258 Ga0436364_1112259
259 Ga0395901_0043236
260 Ga0451853_1911615
261 Ga0451853_2500309
262 Ga0466969_0028283
263 Ga0466972_0038920
264 Ga0466972_0302599
265 Ga0466965_0023967
266 Ga0466965_0066645
267 Ga0466961_0007932
268 Ga0466961_0040102
269 Ga0466961_0101307
270 Ga0466961_0181507
271 Ga0466963_0005989
272 Ga0466963_0340268
273 Ga0466971_0053021
274 Ga0466971_0152772
275 Ga0466970_0010839
276 Ga0466970_0018180
277 Ga0466970_0039682
278 Ga0466970_0155977
279 Ga0466970_0194716
280 Ga0466957_0009332
281 Ga0466957_0058479
282 Ga0466957_0129437
283 Ga0466960_0002760
284 Ga0466960_0010308
285 Ga0466960_0046258
286 Ga0466960_0116071
287 Ga0466959_0004597
288 Ga0466967_0037143
289 Ga0466967_0127049
290 Ga0466967_0152513
291 Ga0495672_0184014
292 Ga0496101_0137583
293 Ga0496102_0150856
294 Ga0496107_0051321
295 Ga0496108_0032797
296 Ga0496108_0170160
297 Ga0496109_0041281
298 Ga0496109_0056148
299 Ga0496110_0072304
300 Ga0496114_0199806
301 Ga0496114_0309859
302 Ga0501031_0128880
303 Ga0501032_0188091
304 Ga0501032_0247829
305 Ga0501036_0003141
306 Ga0501036_0196818
307 Ga0501038_0007635
308 Ga0501038_0166610
309 Ga0501038_0189129
310 Ga0501039_0045225
311 Ga0501039_0111151
312 Ga0501039_0449451
313 Ga0501040_0051468
314 Ga0501040_0156250
315 Ga0501042_0147283
316 Ga0501046_0000188
317 Ga0501067_0044611
318 Ga0501067_0072365
319 Ga0501071_0016901
320 Ga0501071_0029247
321 Ga0501071_0213712
322 Ga0501072_0014094
323 Ga0501072_0042192
324 Ga0501073_0022371
325 Ga0501074_0204699
326 Ga0501075_0030366
327 Ga0501076_0008867
328 Ga0501076_0310016
329 Ga0501209_037617
330 Ga0501079_0017057
331 Ga0501080_0030500
332 Ga0501080_0296245
333 Ga0501081_0016802
334 Ga0501081_0127560
335 Ga0501083_0068936
336 Ga0501035_0096637
337 Ga0501035_0313680
338 nmdc:mga03n38_3658_c1
339 nmdc:mga00v17_106583_c1
340 nmdc:mga00v17_14566_c1
341 nmdc:mga00v17_276664_c1
342 nmdc:mga00v17_304452_c1
343 nmdc:mga00v17_52316_c1
344 nmdc:mga0yw44_14549_c1
345 nmdc:mga0yw44_30428_c1
346 nmdc:mga0yw44_341118_c1
347 nmdc:mga0yw44_486801_c1
348 nmdc:mga0yw44_85353_c1
349 nmdc:mga0yw44_96101_c1
350 nmdc:mga06z11_12940_c1
351 nmdc:mga06z11_18911_c1
352 nmdc:mga04h51_2445_c1
353 nmdc:mga08y16_28629_c1
354 Ga0500644_0000200
355 Ga0500556_0002387
356 Ga0500593_000126
357 Ga0500568_0097923
358 Ga0500573_0184136
359 Ga0501084_0065147
360 Ga0501082_0296671
361 Ga0466962_0054089
362 2643828071
363 2644033953
364 2644091829
365 2644231271
366 2644321632
367 2644531161
368 2740166598
369 2774394368
370 2809194773
371 2812352979
372 2855387412
373 2891972749
374 8054612327

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03061

4HBT

Thioesterase superfamily

43

132

0.96

PF13279

4HBT_2

Thioesterase-like superfamily

189

309

0.95

PF03061

4HBT

Thioesterase superfamily

197

283

0.94

PF20791

Acyl-ACP_TE_C

Acyl-ACP thioesterase C-terminal domain

180

225

0.87

PF20791

Acyl-ACP_TE_C

Acyl-ACP thioesterase C-terminal domain

24

76

0.86

PF13279

4HBT_2

Thioesterase-like superfamily

35

168

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
3hm0-assembly1.cif.gz_D crystal structure of probable thioesterase from bartonella henselae 0.906 148 264
2f41-assembly2.cif.gz_C crystal structure of fapr- a global regulator of fatty acid biosynthesis in b. subtilis 0.8989 197 252
2cye-assembly3.cif.gz_B crystal structure of thioesterase complexed with coenzyme a and zn from thermus thermophilus hb8 0.8856 150 274
2egi-assembly1.cif.gz_H crystal structure of a hypothetical protein(aq1494) from aquifex aeolicus 0.8848 148 255
2cye-assembly3.cif.gz_C crystal structure of thioesterase complexed with coenzyme a and zn from thermus thermophilus hb8 0.8761 150 274
ID Description Score Start End Superfamily
3hm0D00 Alpha Beta;Roll;Thiol Ester Dehydrase; Chain A;Hotdog Thioesterase 0.906 148 264 3.10.129.10
2f41C00 Alpha Beta;Roll;Thiol Ester Dehydrase; Chain A;Hotdog Thioesterase 0.8989 197 252 3.10.129.10
2egiH00 Alpha Beta;Roll;Thiol Ester Dehydrase; Chain A;Hotdog Thioesterase 0.8848 148 255 3.10.129.10
3hm0D00 Alpha Beta;Roll;Thiol Ester Dehydrase; Chain A;Hotdog Thioesterase 0.8761 148 264 3.10.129.10
af_F4HX80_37_180_3.10.129.10 Alpha Beta;Roll;Thiol Ester Dehydrase; Chain A;Hotdog Thioesterase 0.8758 148 273 3.10.129.10
ID Description Score Start End GO Terms
AF-A0A4R6KEU6-F1-model_v4 Acyl-CoA thioester hydrolase 0.9765 6 129 GO:0047617
AF-A0A4R2C2K0-F1-model_v4 Acyl-CoA thioester hydrolase 0.9754 1 129 GO:0047617
AF-A0A838A7R9-F1-model_v4 Acyl-CoA thioesterase 0.9715 1 129 GO:0047617
AF-A0A561BVA5-F1-model_v4 Acyl-CoA thioester hydrolase 0.967 1 129 GO:0047617
AF-A0A7W0HA35-F1-model_v4 Acyl-CoA thioesterase 0.9603 1 130 GO:0047617

Map