F288296

General Info

Members Datasets Scaffolds Average Seq Length
187 132 143 282

Family's Representative Sequence

Representative Sequence 3300048920|Ga0496117_0143079|Ga0496117_0143079_419_1366
Length 315
Sequence MSLPTSVIGGGATPHDRGEGGGVGDDVSRAAQTGSDPARVGRRRGVRGFFGALGVGQWIAVGFLVLLLVAAFFPWLLAPGDPLAIDPGDAFRAPGWGHPFGTDESGRDVYTRVVHGTAPSLVIGVSATVIGILLALVLGTAAALGGRVVDFGVSRFLEVLFAFPGLLLALLVITVYGPGIVTSTIAVGLATAPGYARIIRSQTRAVASSAYVEAAVVLGKSRGRILARHILPNAVAPVFVLVTLGVGQAIVWAAALSYLGLGAEPPAAEWGAMLFAGKNYVTTAWWMTFFPGLAIVLSAAATTVLGRALQRRSLR

Samples

Sample ID Description Type Environment
1 2537561592 Arthrobacter crystallopoietes BAB-32 Isolate Rhizosphere
2 2554235227 Arthrobacter sp. PAO19 Isolate Rhizosphere
3 2585428094 Herbiconiux sp. YR403 Isolate Rhizosphere
4 2643221549 Agromyces sp. Root1464 Isolate Unclassified
5 2643221572 Leifsonia sp. Root60 Isolate Unclassified
6 2643221604 Nocardioides sp. Root190 Isolate Unclassified
7 2643221619 Agromyces sp. Root81 Isolate Unclassified
8 2643221632 Leifsonia sp. Root112D2 Isolate Unclassified
9 2643221649 Leifsonia sp. Root4 Isolate Unclassified
10 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
11 2654587600 Glutamicibacter halophytocola KLBMP5180 Isolate Unclassified
12 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
13 2738541305 Nocardioides sp. CF167 Isolate Unclassified
14 2751185788 Curtobacterium pusillum AA3 Isolate Unclassified
15 2765235841 Pseudomonas putida AA7 Isolate Unclassified
16 2808606700 Arthrobacter agilis UMCV2 Isolate Rhizosphere
17 2844852863 Herbiconiux flava DSM 26474 Isolate Rhizosphere
18 2852677369 Pseudoclavibacter sp. JAI123 Isolate Rhizosphere
19 2857729791 Plantibacter sp. R-72288 Isolate Unclassified
20 2862993130 Planctomonas deserti 13S1-3 v2 Isolate Rhizosphere
21 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
22 2897561785 Pseudoclavibacter endophyticus EGI 60007 Isolate Unclassified
23 2904430863 Curtobacterium oceanosedimentum 1519 Isolate Rhizosphere
24 2905926851 Arthrobacter sedimenti MIC A30 Isolate Rhizosphere
25 2908674828 Curtobacterium sp. 1517 Isolate Rhizosphere
26 2909074476 Curtobacterium sp. 1310 Isolate Rhizosphere
27 2919039151 Curtobacterium sp. 260 Isolate Rhizosphere
28 2919042368 Curtobacterium sp. 320 Isolate Rhizosphere
29 2928104781 Curtobacterium sp. 1544 Isolate Rhizosphere
30 2928121344 Plantibacter flavus 1756 Isolate Rhizosphere
31 2928500415 Curtobacterium oceanosedimentum 1257 Isolate Rhizosphere
32 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
33 2939582691 Mycolicibacterium sp. 624 Isolate Rhizosphere
34 2939660829 Mycetocola sp. 2940 Isolate Rhizosphere
35 2945961074 Pseudomonas sp. W2I6 Isolate Rhizosphere
36 2946003308 Arthrobacter agilis W3I6 Isolate Rhizosphere
37 2964326757 Planctomonas psychrotolerans J5903 Isolate Rhizosphere
38 2966921586 Rathayibacter agropyri 617 Isolate Rhizosphere
39 2974324384 Microbacterium sp. SORGH_AS 344 Isolate Unclassified
40 2984551494 Curtobacterium sp. SORGH_AS776 Isolate Aerial Root
41 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
42 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
43 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
44 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
45 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
46 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
47 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
48 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
49 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
50 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
51 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
52 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
57 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
58 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
59 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
60 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
61 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
62 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
63 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
64 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
65 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
66 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
67 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
68 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
69 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
70 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
71 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
72 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
73 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
74 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
75 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
76 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
77 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
78 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
79 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
80 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
81 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
82 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
83 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
84 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
85 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
86 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
87 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
88 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
89 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
90 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
91 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
92 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
93 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
94 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
95 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
96 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
97 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
98 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
99 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
100 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
101 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
102 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
103 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
104 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
105 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
106 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
107 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
108 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
109 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
110 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
111 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
112 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
113 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
114 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
115 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
116 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
124 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
125 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
126 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
127 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
128 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
129 8002784119 Frankia sp. AgB1.9 Isolate Nodule
130 8055172936 Sphaerisporangium perillae NEAU-ZS1 Isolate Unclassified
131 8056037122 Herbiconiux gentiana CPCC 205716 Isolate Rhizosphere
132 8057345674 Herbiconiux aconitum CPCC 205763 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 76.47
Metatranscriptomes 0
Isolates 23.53

Biome Distribution

Category Percentage (%)
Aerial Root 0.53
Bulb 0
Endosphere 3.74
Nodule 0.53
Rhizoplane 1.07
Rhizosphere 77.01
Stem 0
Stem Tuber 0
Unclassified 17.11

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0058692_1025033 3300003856 Bacteria 1190
2 Ga0070714_100003657 3300005435 Bacteria 11515
3 Ga0070663_100181142 3300005455 Bacteria 1634
4 Ga0068853_100003226 3300005539 Bacteria 12471
5 Ga0075365_10003389 3300006038 Bacteria 8204
6 Ga0075364_10059917 3300006051 Bacteria 2496
7 Ga0105251_10000168 3300009011 Bacteria 67221
8 Ga0105251_10002394 3300009011 Bacteria 14816
9 Ga0105251_10021438 3300009011 Bacteria 3373
10 Ga0105251_10022266 3300009011 Bacteria 3294
11 Ga0105244_10018269 3300009036 Bacteria 3938
12 Ga0105250_10000122 3300009092 Bacteria 67516
13 Ga0157369_10001098 3300013105 Bacteria 33862
14 Ga0157372_10492123 3300013307 Bacteria 1430
15 Ga0207696_1000264 3300025711 Bacteria 67521
16 Ga0207713_1000020 3300025735 Bacteria 359258
17 Ga0207713_1045990 3300025735 Bacteria 1778
18 Ga0207700_10118092 3300025928 Bacteria 2146
19 Ga0207664_10001840 3300025929 Bacteria 13986
20 Ga0307513_10008236 3300031456 Bacteria 13372
21 Ga0307513_10026720 3300031456 Bacteria 6646
22 Ga0307408_100009124 3300031548 Bacteria 6542
23 Ga0307410_10083536 3300031852 Bacteria 2249
24 Ga0307410_10121985 3300031852 Bacteria 1902
25 Ga0307406_10212395 3300031901 Bacteria 1432
26 Ga0307412_10038985 3300031911 Bacteria 3064
27 Ga0307416_100002337 3300032002 Bacteria 10842
28 Ga0307411_10091845 3300032005 Bacteria 2122
29 Ga0307411_10320948 3300032005 Bacteria 1251
30 Ga0466972_0003646 3300044658 Bacteria 7654
31 Ga0466965_0072163 3300044683 Bacteria 1737
32 Ga0466961_0105146 3300044693 Bacteria 1777
33 Ga0466970_0037513 3300044765 Bacteria 2569
34 Ga0466970_0150472 3300044765 Bacteria 1285
35 Ga0466957_0001532 3300044842 Bacteria 12167
36 Ga0466960_0044849 3300044901 Bacteria 2109
37 Ga0466959_0011717 3300045049 Bacteria 6308
38 Ga0466959_0055227 3300045049 Bacteria 2900
39 Ga0495627_001627 3300046453 Bacteria 12555
40 Ga0495627_083136 3300046453 Bacteria 926
41 Ga0495591_000009 3300046458 Bacteria 331626
42 Ga0495591_000507 3300046458 Bacteria 30595
43 Ga0495591_003675 3300046458 Bacteria 7800
44 Ga0495650_0000143 3300046471 Bacteria 168096
45 Ga0495605_0000001 3300046474 Bacteria 614538
46 Ga0495605_0027959 3300046474 Bacteria 2916
47 Ga0495585_0000127 3300046492 Bacteria 82252
48 Ga0495585_0056969 3300046492 Bacteria 2157
49 Ga0495607_0023058 3300046501 Bacteria 3900
50 Ga0495607_0088670 3300046501 Bacteria 1681
51 Ga0495607_0108927 3300046501 Bacteria 1471
52 Ga0495607_0134619 3300046501 Bacteria 1281
53 Ga0495583_0001659 3300046506 Bacteria 21606
54 Ga0495583_0005381 3300046506 Bacteria 8719
55 Ga0495606_0000013 3300046507 Bacteria 292850
56 Ga0495606_0000465 3300046507 Bacteria 66730
57 Ga0495606_0053422 3300046507 Bacteria 2622
58 Ga0495610_0006394 3300046512 Bacteria 8112
59 Ga0495616_0116213 3300046513 Bacteria 1238
60 Ga0495620_0003622 3300046515 Bacteria 8814
61 Ga0495628_0013322 3300046516 Bacteria 6919
62 Ga0495632_0001842 3300046519 Bacteria 17082
63 Ga0495632_0002067 3300046519 Bacteria 15758
64 Ga0495632_0008896 3300046519 Bacteria 6101
65 Ga0495637_0000021 3300046520 Bacteria 179141
66 Ga0495637_0000039 3300046520 Bacteria 117112
67 Ga0495643_0005760 3300046522 Bacteria 8292
68 Ga0495643_0010223 3300046522 Bacteria 5782
69 Ga0495643_0014775 3300046522 Bacteria 4635
70 Ga0495648_0013947 3300046524 Bacteria 5912
71 Ga0495654_0013695 3300046530 Bacteria 4334
72 Ga0495654_0013824 3300046530 Bacteria 4308
73 Ga0495654_0020290 3300046530 Bacteria 3465
74 Ga0495609_0000020 3300046538 Bacteria 294662
75 Ga0495609_0000062 3300046538 Bacteria 138094
76 Ga0495597_0041049 3300046542 Bacteria 2068
77 Ga0495645_0077201 3300046543 Bacteria 2395
78 Ga0495668_0002202 3300046616 Bacteria 16605
79 Ga0495611_0000802 3300046648 Bacteria 17419
80 Ga0495611_0057745 3300046648 Bacteria 1759
81 Ga0495625_0000028 3300046660 Bacteria 256946
82 Ga0495661_0000001 3300046665 Bacteria 898372
83 Ga0495661_0000154 3300046665 Bacteria 80795
84 Ga0495661_0007859 3300046665 Bacteria 7418
85 Ga0495670_0019031 3300046691 Bacteria 3384
86 Ga0495671_0000283 3300046692 Bacteria 42497
87 Ga0495671_0001197 3300046692 Bacteria 17759
88 Ga0495589_0000731 3300046794 Bacteria 21222
89 Ga0495660_0003755 3300046810 Bacteria 9315
90 Ga0495660_0008469 3300046810 Bacteria 6023
91 Ga0495660_0008590 3300046810 Bacteria 5977
92 Ga0495672_0002839 3300047320 Bacteria 15399
93 Ga0495676_0000006 3300047321 Bacteria 280508
94 Ga0495683_0015517 3300047323 Bacteria 3962
95 Ga0495679_000150 3300047446 Bacteria 62726
96 Ga0495679_001457 3300047446 Bacteria 13405
97 Ga0495679_001755 3300047446 Bacteria 11904
98 Ga0495673_0001371 3300047469 Bacteria 19679
99 Ga0495673_0023116 3300047469 Bacteria 3032
100 Ga0495673_0038826 3300047469 Bacteria 2163
101 Ga0495673_0043162 3300047469 Bacteria 2020
102 Ga0495681_0003327 3300047470 Bacteria 11187
103 Ga0495681_0012482 3300047470 Bacteria 4988
104 Ga0495681_0020658 3300047470 Bacteria 3568
105 Ga0495681_0042017 3300047470 Bacteria 2216
106 Ga0495686_0001356 3300047472 Bacteria 27343
107 Ga0495686_0016973 3300047472 Bacteria 4917
108 Ga0495686_0055544 3300047472 Bacteria 2475
109 Ga0495626_0000019 3300048091 Bacteria 225494
110 Ga0496110_0032644 3300048913 Bacteria 4499
111 Ga0496110_0082557 3300048913 Bacteria 2866
112 Ga0496117_0000216 3300048920 Bacteria 111598
113 Ga0496117_0000218 3300048920 Bacteria 109766
114 Ga0496117_0077388 3300048920 Bacteria 2202
115 Ga0496117_0143079 3300048920 Bacteria 1429
116 Ga0496119_0039822 3300048922 Bacteria 3016
117 Ga0496120_0002033 3300048923 Bacteria 21942
118 Ga0496122_0022439 3300048925 Bacteria 5611
119 Ga0496122_0042524 3300048925 Bacteria 3573
120 Ga0496123_0037120 3300048926 Bacteria 3445
121 Ga0496124_0001142 3300048927 Bacteria 41628
122 Ga0496124_0001627 3300048927 Bacteria 32227
123 Ga0496124_0005372 3300048927 Bacteria 14469
124 Ga0496125_0000615 3300048928 Bacteria 60392
125 Ga0496125_0073936 3300048928 Bacteria 2646
126 Ga0496126_0152117 3300048929 Bacteria 1982
127 Ga0495678_000083 3300049459 Bacteria 117558
128 Ga0495678_003258 3300049459 Bacteria 10150
129 Ga0495678_004091 3300049459 Bacteria 8648
130 Ga0501032_0019172 3300049569 Bacteria 4786
131 Ga0501034_0002809 3300049571 Bacteria 20363
132 Ga0501036_0086114 3300049572 Bacteria 2656
133 Ga0501037_0000565 3300049573 Bacteria 29305
134 Ga0501038_0008994 3300049574 Bacteria 9163
135 Ga0501039_0005621 3300049575 Bacteria 9489
136 Ga0501043_0002282 3300049579 Bacteria 16285
137 Ga0501067_0154737 3300049583 Bacteria 1277
138 Ga0501070_0120591 3300049586 Bacteria 2167
139 nmdc:mga00v17_49387_c1 3300050491 Bacteria 2552
140 Ga0500651_0000710 3300053093 Bacteria 16401
141 Ga0500573_0113436 3300053140 Bacteria 1515
142 Ga0500616_0000076 3300053153 Bacteria 216836
143 Ga0500616_0018204 3300053153 Bacteria 3974

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046516 Ga0495628_0013322 Ga0495628_0013322_3496_4362 243
2 3300006038 Ga0075365_10003389 Ga0075365_100033894 244
3 3300044842 Ga0466957_0001532 Ga0466957_0001532_6295_7161 245
4 3300045049 Ga0466959_0011717 Ga0466959_0011717_4396_5262 245
5 3300044658 Ga0466972_0003646 Ga0466972_0003646_952_1818 246
6 3300044901 Ga0466960_0044849 Ga0466960_0044849_681_1547 246
7 3300005435 Ga0070714_100003657 Ga0070714_1000036579 249
8 3300025928 Ga0207700_10118092 Ga0207700_101180922 249
9 3300025929 Ga0207664_10001840 Ga0207664_1000184013 249
10 3300047470 Ga0495681_0042017 Ga0495681_0042017_23_781 252
11 3300031456 Ga0307513_10008236 Ga0307513_100082365 253
12 3300053140 Ga0500573_0113436 Ga0500573_0113436_573_1376 253
13 3300031456 Ga0307513_10026720 Ga0307513_100267204 258
14 3300031852 Ga0307410_10121985 Ga0307410_101219852 259
15 3300031901 Ga0307406_10212395 Ga0307406_102123952 259
16 3300032002 Ga0307416_100002337 Ga0307416_10000233711 259
17 3300032005 Ga0307411_10091845 Ga0307411_100918452 259
18 3300006051 Ga0075364_10059917 Ga0075364_100599172 260
19 3300044693 Ga0466961_0105146 Ga0466961_0105146_116_970 260
20 3300050491 nmdc:mga00v17_49387_c1 nmdc:mga00v17_49387_c1_168_1034 260
21 iso_pu_bacteria 2554235227 2555230950 261
22 iso_pu_bacteria 2654587600 2655033826 261
23 3300013105 Ga0157369_10001098 Ga0157369_1000109829 263
24 3300031548 Ga0307408_100009124 Ga0307408_1000091243 263
25 3300031852 Ga0307410_10083536 Ga0307410_100835362 263
26 3300032005 Ga0307411_10320948 Ga0307411_103209482 263
27 3300048920 Ga0496117_0077388 Ga0496117_0077388_985_1863 263
28 3300048920 Ga0496117_0000216 Ga0496117_0000216_53139_53951 264
29 3300053153 Ga0500616_0018204 Ga0500616_0018204_2712_3587 264
30 3300009011 Ga0105251_10000168 Ga0105251_1000016814 265
31 3300009092 Ga0105250_10000122 Ga0105250_1000012255 265
32 3300025711 Ga0207696_1000264 Ga0207696_100026455 265
33 3300025735 Ga0207713_1000020 Ga0207713_1000020209 265
34 3300031911 Ga0307412_10038985 Ga0307412_100389852 265
35 3300044765 Ga0466970_0150472 Ga0466970_0150472_283_1161 265
36 3300045049 Ga0466959_0055227 Ga0466959_0055227_1348_2226 265
37 iso_pu_bacteria 2643221632 2644183188 265
38 3300044683 Ga0466965_0072163 Ga0466965_0072163_827_1696 267
39 3300053093 Ga0500651_0000710 Ga0500651_0000710_13627_14433 267
40 3300047472 Ga0495686_0001356 Ga0495686_0001356_9684_10559 268
41 3300005539 Ga0068853_100003226 Ga0068853_1000032268 270
42 3300048925 Ga0496122_0022439 Ga0496122_0022439_4259_5209 272
43 iso_pu_bacteria 2966921586 2966923441 274
44 iso_pu_bacteria 2738541305 2738870125 275
45 iso_pu_bacteria 2897561785 2897564558 275
46 3300013307 Ga0157372_10492123 Ga0157372_104921232 276
47 iso_pu_bacteria 2643221649 2644279715 277
48 3300009011 Ga0105251_10002394 Ga0105251_1000239411 278
49 3300025735 Ga0207713_1045990 Ga0207713_10459902 278
50 3300048913 Ga0496110_0032644 Ga0496110_0032644_1809_2672 278
51 3300048925 Ga0496122_0042524 Ga0496122_0042524_1708_2571 278
52 3300048927 Ga0496124_0005372 Ga0496124_0005372_5618_6481 278
53 3300048928 Ga0496125_0073936 Ga0496125_0073936_68_931 278
54 iso_pu_bacteria 2585428094 2587862818 278
55 iso_pu_bacteria 2643221604 2644036299 278
56 iso_pu_bacteria 2643221572 2643875177 279
57 iso_pu_bacteria 2643221669 2644382233 279
58 iso_pu_bacteria 2721755702 2723642048 279
59 iso_pu_bacteria 2895660088 2895661304 279
60 iso_pu_bacteria 2935409751 2935411399 279
61 iso_pu_bacteria 2939582691 2939586214 279
62 iso_pu_bacteria 2844852863 2844855223 280
63 iso_pu_bacteria 2939660829 2939664022 280
64 3300049569 Ga0501032_0019172 Ga0501032_0019172_2334_3200 281
65 3300049571 Ga0501034_0002809 Ga0501034_0002809_7931_8797 281
66 3300049572 Ga0501036_0086114 Ga0501036_0086114_296_1162 281
67 3300049573 Ga0501037_0000565 Ga0501037_0000565_632_1498 281
68 3300049574 Ga0501038_0008994 Ga0501038_0008994_1400_2266 281
69 3300049575 Ga0501039_0005621 Ga0501039_0005621_7082_7948 281
70 3300049579 Ga0501043_0002282 Ga0501043_0002282_11401_12267 281
71 3300049583 Ga0501067_0154737 Ga0501067_0154737_401_1267 281
72 3300049586 Ga0501070_0120591 Ga0501070_0120591_923_1789 281
73 iso_pu_bacteria 2751185788 2753301319 281
74 iso_pu_bacteria 2919042368 2919044946 281
75 iso_pu_bacteria 2928104781 2928106768 281
76 iso_pu_bacteria 2984551494 2984553505 281
77 iso_pu_bacteria 8002784119 8002786766 281
78 iso_pu_bacteria 8057345674 8057349132 281
79 3300053153 Ga0500616_0000076 Ga0500616_0000076_89216_90142 282
80 iso_pu_bacteria 2857729791 2857730056 282
81 iso_pu_bacteria 2904430863 2904433459 282
82 iso_pu_bacteria 2908674828 2908675315 282
83 iso_pu_bacteria 2909074476 2909075362 282
84 iso_pu_bacteria 2919039151 2919039999 282
85 iso_pu_bacteria 2928121344 2928123281 282
86 iso_pu_bacteria 2928500415 2928501340 282
87 iso_pu_bacteria 8055172936 8055178242 282
88 iso_pu_bacteria 2765235841 2765584510 283
89 iso_pu_bacteria 2808606700 2810365245 283
90 iso_pu_bacteria 2852677369 2852680307 283
91 iso_pu_bacteria 2905926851 2905928547 283
92 iso_pu_bacteria 2945961074 2945962558 283
93 iso_pu_bacteria 2946003308 2946003500 283
94 3300005455 Ga0070663_100181142 Ga0070663_1001811422 284
95 3300048920 Ga0496117_0143079 Ga0496117_0143079_419_1366 284
96 iso_pu_bacteria 2964326757 2964329359 284
97 iso_pu_bacteria 8056037122 8056037841 284
98 3300044765 Ga0466970_0037513 Ga0466970_0037513_1609_2487 286
99 iso_pu_bacteria 2537561592 2537898713 286
100 iso_pu_bacteria 2643221549 2643767753 286
101 iso_pu_bacteria 2643221619 2644111128 286
102 iso_pu_bacteria 2862993130 2862995740 286
103 iso_pu_bacteria 2974324384 2974324729 286
104 3300003856 Ga0058692_1025033 Ga0058692_10250331 287
105 3300009011 Ga0105251_10021438 Ga0105251_100214383 287
106 3300009011 Ga0105251_10022266 Ga0105251_100222662 287
107 3300009036 Ga0105244_10018269 Ga0105244_100182692 287
108 3300046453 Ga0495627_001627 Ga0495627_001627_2939_3802 287
109 3300046453 Ga0495627_083136 Ga0495627_083136_49_912 287
110 3300046458 Ga0495591_000009 Ga0495591_000009_305177_306040 287
111 3300046458 Ga0495591_000507 Ga0495591_000507_26432_27295 287
112 3300046458 Ga0495591_003675 Ga0495591_003675_32_895 287
113 3300046471 Ga0495650_0000143 Ga0495650_0000143_160975_161838 287
114 3300046474 Ga0495605_0000001 Ga0495605_0000001_502133_502996 287
115 3300046474 Ga0495605_0027959 Ga0495605_0027959_830_1693 287
116 3300046492 Ga0495585_0000127 Ga0495585_0000127_8244_9107 287
117 3300046492 Ga0495585_0056969 Ga0495585_0056969_1217_2080 287
118 3300046501 Ga0495607_0023058 Ga0495607_0023058_2838_3701 287
119 3300046501 Ga0495607_0088670 Ga0495607_0088670_111_974 287
120 3300046501 Ga0495607_0108927 Ga0495607_0108927_47_910 287
121 3300046501 Ga0495607_0134619 Ga0495607_0134619_253_1116 287
122 3300046506 Ga0495583_0001659 Ga0495583_0001659_13592_14455 287
123 3300046506 Ga0495583_0005381 Ga0495583_0005381_2967_3830 287
124 3300046507 Ga0495606_0000013 Ga0495606_0000013_30136_30999 287
125 3300046507 Ga0495606_0000465 Ga0495606_0000465_48905_49768 287
126 3300046507 Ga0495606_0053422 Ga0495606_0053422_1602_2465 287
127 3300046512 Ga0495610_0006394 Ga0495610_0006394_2699_3562 287
128 3300046513 Ga0495616_0116213 Ga0495616_0116213_296_1159 287
129 3300046515 Ga0495620_0003622 Ga0495620_0003622_2949_3812 287
130 3300046519 Ga0495632_0001842 Ga0495632_0001842_5371_6234 287
131 3300046519 Ga0495632_0002067 Ga0495632_0002067_11946_12809 287
132 3300046519 Ga0495632_0008896 Ga0495632_0008896_2749_3612 287
133 3300046520 Ga0495637_0000021 Ga0495637_0000021_6311_7174 287
134 3300046520 Ga0495637_0000039 Ga0495637_0000039_19206_20069 287
135 3300046522 Ga0495643_0005760 Ga0495643_0005760_4927_5790 287
136 3300046522 Ga0495643_0010223 Ga0495643_0010223_3939_4802 287
137 3300046522 Ga0495643_0014775 Ga0495643_0014775_767_1630 287
138 3300046524 Ga0495648_0013947 Ga0495648_0013947_948_1811 287
139 3300046530 Ga0495654_0013695 Ga0495654_0013695_2985_3848 287
140 3300046530 Ga0495654_0013824 Ga0495654_0013824_884_1747 287
141 3300046530 Ga0495654_0020290 Ga0495654_0020290_1443_2306 287
142 3300046538 Ga0495609_0000020 Ga0495609_0000020_211158_212021 287
143 3300046538 Ga0495609_0000062 Ga0495609_0000062_5373_6236 287
144 3300046542 Ga0495597_0041049 Ga0495597_0041049_285_1148 287
145 3300046543 Ga0495645_0077201 Ga0495645_0077201_360_1223 287
146 3300046616 Ga0495668_0002202 Ga0495668_0002202_10841_11704 287
147 3300046648 Ga0495611_0000802 Ga0495611_0000802_12779_13642 287
148 3300046648 Ga0495611_0057745 Ga0495611_0057745_443_1306 287
149 3300046660 Ga0495625_0000028 Ga0495625_0000028_248231_249094 287
150 3300046665 Ga0495661_0000001 Ga0495661_0000001_148915_149778 287
151 3300046665 Ga0495661_0000154 Ga0495661_0000154_3016_3879 287
152 3300046665 Ga0495661_0007859 Ga0495661_0007859_3374_4237 287
153 3300046691 Ga0495670_0019031 Ga0495670_0019031_1468_2331 287
154 3300046692 Ga0495671_0000283 Ga0495671_0000283_5589_6452 287
155 3300046692 Ga0495671_0001197 Ga0495671_0001197_9632_10495 287
156 3300046794 Ga0495589_0000731 Ga0495589_0000731_17439_18302 287
157 3300046810 Ga0495660_0003755 Ga0495660_0003755_44_907 287
158 3300046810 Ga0495660_0008469 Ga0495660_0008469_3984_4847 287
159 3300046810 Ga0495660_0008590 Ga0495660_0008590_4380_5243 287
160 3300047320 Ga0495672_0002839 Ga0495672_0002839_12675_13538 287
161 3300047321 Ga0495676_0000006 Ga0495676_0000006_272368_273231 287
162 3300047323 Ga0495683_0015517 Ga0495683_0015517_1463_2326 287
163 3300047446 Ga0495679_000150 Ga0495679_000150_54198_55061 287
164 3300047446 Ga0495679_001457 Ga0495679_001457_5486_6349 287
165 3300047446 Ga0495679_001755 Ga0495679_001755_3473_4336 287
166 3300047469 Ga0495673_0001371 Ga0495673_0001371_4787_5650 287
167 3300047469 Ga0495673_0023116 Ga0495673_0023116_1179_2042 287
168 3300047469 Ga0495673_0038826 Ga0495673_0038826_1035_1898 287
169 3300047469 Ga0495673_0043162 Ga0495673_0043162_1133_1996 287
170 3300047470 Ga0495681_0003327 Ga0495681_0003327_979_1842 287
171 3300047470 Ga0495681_0012482 Ga0495681_0012482_2015_2878 287
172 3300047470 Ga0495681_0020658 Ga0495681_0020658_1727_2590 287
173 3300047472 Ga0495686_0016973 Ga0495686_0016973_2732_3595 287
174 3300047472 Ga0495686_0055544 Ga0495686_0055544_654_1517 287
175 3300048091 Ga0495626_0000019 Ga0495626_0000019_217333_218196 287
176 3300048913 Ga0496110_0082557 Ga0496110_0082557_1127_1990 287
177 3300048920 Ga0496117_0000218 Ga0496117_0000218_105810_106673 287
178 3300048922 Ga0496119_0039822 Ga0496119_0039822_660_1523 287
179 3300048923 Ga0496120_0002033 Ga0496120_0002033_3044_3907 287
180 3300048926 Ga0496123_0037120 Ga0496123_0037120_1355_2218 287
181 3300048927 Ga0496124_0001142 Ga0496124_0001142_3159_4022 287
182 3300048927 Ga0496124_0001627 Ga0496124_0001627_3060_3923 287
183 3300048928 Ga0496125_0000615 Ga0496125_0000615_56608_57471 287
184 3300048929 Ga0496126_0152117 Ga0496126_0152117_335_1198 287
185 3300049459 Ga0495678_000083 Ga0495678_000083_97207_98070 287
186 3300049459 Ga0495678_003258 Ga0495678_003258_2324_3187 287
187 3300049459 Ga0495678_004091 Ga0495678_004091_1082_1945 287

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00528

BPD_transp_1

Binding-protein-dependent transport system inner membrane component

127

315

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
3tui-assembly2.cif.gz_E inward facing conformations of the metni methionine abc transporter: cy5 native crystal form 0.8345 78 282
3tuz-assembly2.cif.gz_F inward facing conformations of the metni methionine abc transporter: cy5 semet soak crystal form 0.8184 81 282
7ahc-assembly1.cif.gz_B opua apo inward-facing 0.7994 84 279
3tui-assembly2.cif.gz_E inward facing conformations of the metni methionine abc transporter: cy5 native crystal form 0.7921 78 282
3dhw-assembly1.cif.gz_B crystal structure of methionine importer metni 0.7879 82 274
ID Description Score Start End Superfamily
af_Q2G1F6_179_383_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9368 79 282 1.10.3720.10
af_P0AGH5_85_292_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9366 76 282 1.10.3720.10
af_P75799_92_298_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9334 77 282 1.10.3720.10
af_P0AEG1_88_295_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9296 76 282 1.10.3720.10
af_P0AGH5_85_292_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9281 76 282 1.10.3720.10
ID Description Score Start End GO Terms
AF-A0A4R9BYG3-F1-model_v4 ABC transporter permease 0.9844 22 284 GO:0005886
GO:0055085
AF-A0A7K1KDL4-F1-model_v4 ABC transporter permease 0.9843 25 287 GO:0005886
GO:0055085
AF-A0A251YC80-F1-model_v4 Glutathione transport system permease protein GsiD 0.9839 33 284 GO:0005886
GO:0055085
AF-A0A399TGJ8-F1-model_v4 deleted 0.9832 25 284
AF-A0A2S3ZJE4-F1-model_v4 Peptide ABC transporter permease 0.9817 23 284 GO:0005886
GO:0055085

Feature Viewer

pLDDT pTM Quality
86.33 0.81 High
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Predicted Structure (AlphaFold2)

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