F287887

General Info

Members Datasets Scaffolds Average Seq Length
187 149 374 264

Family's Representative Sequence

Representative Sequence 3300031507|Ga0307509_10081609|Ga0307509_100816092
Length 297
Sequence MTPLGDRKNAPPGPTSRHSDPMPETVHRRGLDAQGYIEREGSLGRIPHAFRPVVAAARDRLIDLYGGRLNSAYLYGSIPRGTARVGRSDLDLLVVTRQEPTEEDRAKARNLGEALDKEFPEIDGVGTLLYGRARLLSEPEAYDLGWFVACLCTPLLGEDLAEDLPRYRPDAQLARETNGDLALLLPSWRERIATAEDTDEARRPLVRYMSRHLVRTGFTLVMPRWNGWTSDLREMAEAFAAYYPERAESLREAAELGYDPTTGDASVLRWYVDDLGPWLAEEYARVHGLKAPRPTTD

Samples

Sample ID Description Type Environment
1 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
5 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
6 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
7 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
8 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
9 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
10 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
11 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
12 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
13 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
14 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
15 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
16 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
17 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
18 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
19 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
20 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
21 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
22 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
23 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
24 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
25 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
26 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
27 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
28 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
29 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
30 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
31 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
32 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
33 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
34 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
35 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
36 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
37 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
38 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
39 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
40 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
41 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
42 3300042132 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_070716_133 Metagenome Rhizosphere
43 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
44 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
45 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
46 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
47 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
48 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
49 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
50 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
51 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
52 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
53 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
54 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
55 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
56 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
57 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
58 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
59 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
60 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
61 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
62 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
63 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
64 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
65 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
66 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
67 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
68 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
69 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
70 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
71 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
72 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
73 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
74 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
75 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
76 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
77 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
78 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
79 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
80 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
81 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
82 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
83 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
84 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
85 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
86 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
87 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
88 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
89 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
90 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
91 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
92 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
93 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
94 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
95 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
96 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
97 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
98 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
99 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
100 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
101 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
102 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
103 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
104 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
105 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
106 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
107 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
108 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
111 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
112 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
114 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
115 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
116 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
117 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
118 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
119 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
120 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
121 2643221647 Streptomyces sp. Root369 Isolate Unclassified
122 2643221714 Streptomyces sp. Root264 Isolate Unclassified
123 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
124 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
125 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
126 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
127 2867428634 Streptomyces sp. RP5T Isolate Unclassified
128 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
129 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
130 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
131 2935390628 Streptomyces sp. PvR034 Isolate Rhizosphere
132 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
133 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
134 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
135 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
136 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
137 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
138 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
139 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
140 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
141 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
142 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
143 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
144 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
145 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
146 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
147 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
148 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
149 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 82.89
Metatranscriptomes 1.07
Isolates 16.04

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.74
Nodule 0
Rhizoplane 0.53
Rhizosphere 79.68
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307509_10081609 3300031507 Bacteria 3339
2 rootL2_10058403 3300003322 Bacteria 1779
3 rootH1_10109988 3300003323 Bacteria 2697
4 Ga0006562J51391_1214708 3300003578 Bacteria 4250
5 Ga0006562J51391_1214709 3300003578 Bacteria 4190
6 Ga0068853_100025230 3300005539 Bacteria 4988
7 Ga0075367_10013839 3300006178 Bacteria 4352
8 Ga0105245_10067275 3300009098 Bacteria 3245
9 Ga0105245_10143774 3300009098 Bacteria 2249
10 Ga0105238_10106231 3300009551 Bacteria 2789
11 Ga0105239_10879585 3300010375 Bacteria 1028
12 Ga0105246_10003160 3300011119 Bacteria 10008
13 Ga0105246_10037244 3300011119 Bacteria 3264
14 Ga0105246_10063671 3300011119 Bacteria 2573
15 Ga0157369_10057403 3300013105 Bacteria 4200
16 Ga0157372_10198920 3300013307 Bacteria 2321
17 Ga0183367_1015 3300015688 Bacteria 298435
18 Ga0207694_10392103 3300025924 Bacteria 1154
19 Ga0207687_10215316 3300025927 Bacteria 1509
20 Ga0207691_10474876 3300025940 Bacteria 1063
21 Ga0207639_10188347 3300026041 Bacteria 1760
22 Ga0209371_1008960 3300027312 Bacteria 3243
23 Ga0209813_10013298 3300027866 Bacteria 2195
24 Ga0268256_1009282 3300030500 Bacteria 3284
25 Ga0307511_10001695 3300030521 Bacteria 23222
26 Ga0307511_10046082 3300030521 Bacteria 3592
27 Ga0307511_10073836 3300030521 Bacteria 2463
28 Ga0307512_10000978 3300030522 Bacteria 42035
29 Ga0307513_10033014 3300031456 Bacteria 5825
30 Ga0307509_10029556 3300031507 Bacteria 6080
31 Ga0307509_10174553 3300031507 Bacteria 2023
32 Ga0307508_10074613 3300031616 Bacteria 2968
33 Ga0307514_10093041 3300031649 Bacteria 2191
34 Ga0307516_10088303 3300031730 Bacteria 2933
35 Ga0307518_10057419 3300031838 Bacteria 2827
36 Ga0307507_10063265 3300033179 Bacteria 3427
37 Ga0307510_10034909 3300033180 Bacteria 5622
38 Ga0395900_0023434 3300037418 Bacteria 6319
39 Ga0395900_0044010 3300037418 Bacteria 4602
40 Ga0395898_0020600 3300037466 Bacteria 6698
41 Ga0395898_0025765 3300037466 Bacteria 5922
42 Ga0395898_0059925 3300037466 Bacteria 3701
43 Ga0439436_0000868 3300041404 Bacteria 8261
44 Ga0439436_0032553 3300041404 Bacteria 1512
45 Ga0451853_1278555 3300041512 Bacteria 3586
46 Ga0451853_2803358 3300041512 Bacteria 4471
47 Ga0439433_0005409 3300041999 Bacteria 2742
48 Ga0439433_0011598 3300041999 Bacteria 1932
49 Ga0439442_004413 3300042002 Bacteria 2795
50 Ga0439442_009919 3300042002 Bacteria 1927
51 Ga0439448_0013891 3300042005 Bacteria 2424
52 Ga0439432_063563 3300042006 Bacteria 1134
53 Ga0439449_0002606 3300042007 Bacteria 7029
54 Ga0439449_0014561 3300042007 Bacteria 2956
55 Ga0439455_0001235 3300042012 Bacteria 4187
56 Ga0439457_000429 3300042014 Bacteria 12105
57 Ga0450894_001039 3300042131 Bacteria 4251
58 Ga0450895_007328 3300042132 Bacteria 912
59 Ga0450896_000310 3300042133 Bacteria 4606
60 Ga0450898_015701 3300042134 Bacteria 1285
61 Ga0450898_034288 3300042134 Bacteria 942
62 Ga0450903_002007 3300042138 Bacteria 3669
63 Ga0450906_000129 3300042145 Bacteria 13330
64 Ga0439458_0000126 3300042157 Bacteria 15861
65 Ga0466969_0015959 3300044656 Bacteria 3936
66 Ga0466969_0085623 3300044656 Bacteria 1498
67 Ga0466972_0006168 3300044658 Bacteria 6023
68 Ga0466972_0021288 3300044658 Bacteria 3234
69 Ga0466972_0025955 3300044658 Bacteria 2902
70 Ga0466965_0000887 3300044683 Bacteria 11435
71 Ga0466966_0003462 3300044684 Bacteria 10400
72 Ga0466966_0012932 3300044684 Bacteria 5526
73 Ga0466961_0044009 3300044693 Bacteria 2857
74 Ga0466961_0065790 3300044693 Bacteria 2303
75 Ga0466963_0000577 3300044694 Bacteria 17374
76 Ga0466964_0016797 3300044706 Bacteria 2797
77 Ga0466971_0014221 3300044719 Bacteria 3499
78 Ga0466971_0024050 3300044719 Bacteria 2716
79 Ga0466968_0018196 3300044735 Bacteria 2816
80 Ga0466970_0003285 3300044765 Bacteria 7856
81 Ga0466957_0001137 3300044842 Bacteria 13793
82 Ga0466960_0110654 3300044901 Bacteria 1427
83 Ga0466959_0117020 3300045049 Bacteria 1897
84 Ga0466958_0026783 3300045836 Bacteria 3407
85 Ga0466958_0277206 3300045836 Bacteria 1074
86 Ga0466967_0023806 3300045976 Bacteria 5024
87 Ga0495592_0003591 3300046454 Bacteria 11152
88 Ga0495603_0071823 3300046455 Bacteria 2033
89 Ga0495629_0049136 3300046459 Bacteria 2957
90 Ga0495638_0206079 3300046460 Bacteria 1107
91 Ga0495651_0040996 3300046462 Bacteria 3597
92 Ga0495582_0019152 3300046473 Bacteria 3745
93 Ga0495662_0015278 3300046476 Bacteria 3730
94 Ga0495664_0001242 3300046477 Bacteria 13340
95 Ga0495585_0058895 3300046492 Bacteria 2118
96 Ga0495594_0046558 3300046499 Bacteria 2382
97 Ga0495618_0253997 3300046514 Bacteria 1102
98 Ga0495620_0081716 3300046515 Bacteria 1306
99 Ga0495628_0039995 3300046516 Bacteria 3749
100 Ga0495652_0010249 3300046529 Bacteria 8498
101 Ga0495640_0065776 3300046533 Bacteria 2447
102 Ga0495587_0034672 3300046536 Bacteria 3042
103 Ga0495622_0020000 3300046557 Bacteria 3116
104 Ga0495668_0117403 3300046616 Bacteria 1455
105 Ga0495634_0004615 3300046642 Bacteria 10755
106 Ga0495611_0007737 3300046648 Bacteria 4564
107 Ga0495625_0002645 3300046660 Bacteria 19105
108 Ga0495635_0000630 3300046663 Bacteria 22652
109 Ga0495588_0001717 3300046674 Bacteria 9330
110 Ga0495588_0036196 3300046674 Bacteria 2503
111 Ga0495657_0002765 3300046675 Bacteria 14612
112 Ga0495646_0000669 3300046680 Bacteria 18793
113 Ga0495613_0005879 3300046689 Bacteria 9182
114 Ga0495613_0045585 3300046689 Bacteria 3242
115 Ga0495624_0082808 3300046690 Bacteria 1985
116 Ga0495670_0019746 3300046691 Bacteria 3321
117 Ga0495670_0026594 3300046691 Bacteria 2865
118 Ga0495671_0002799 3300046692 Bacteria 10913
119 Ga0495649_0118202 3300046694 Bacteria 1403
120 Ga0495589_0070434 3300046794 Bacteria 1709
121 Ga0495600_0132812 3300046809 Bacteria 1618
122 Ga0495581_0005833 3300047315 Bacteria 7140
123 Ga0495581_0027328 3300047315 Bacteria 3308
124 Ga0495604_0000597 3300047317 Bacteria 31188
125 Ga0495636_0014721 3300047318 Bacteria 3113
126 Ga0495636_0018570 3300047318 Bacteria 2791
127 Ga0495636_0019576 3300047318 Bacteria 2722
128 Ga0495676_0019814 3300047321 Bacteria 5912
129 Ga0495683_0083978 3300047323 Bacteria 1550
130 Ga0495687_003104 3300047443 Bacteria 12436
131 Ga0495687_003604 3300047443 Bacteria 11080
132 Ga0495675_0009811 3300047444 Bacteria 5970
133 Ga0495685_002780 3300047447 Bacteria 5518
134 Ga0495685_008876 3300047447 Bacteria 3351
135 Ga0495685_016047 3300047447 Bacteria 2559
136 Ga0495685_019001 3300047447 Bacteria 2359
137 Ga0495685_028262 3300047447 Bacteria 1929
138 Ga0495685_040285 3300047447 Bacteria 1597
139 Ga0495681_0011323 3300047470 Bacteria 5319
140 Ga0495686_0156393 3300047472 Bacteria 1335
141 Ga0495602_0004911 3300048088 Bacteria 14001
142 Ga0495614_0028976 3300048089 Bacteria 2383
143 Ga0496109_0193464 3300048912 Bacteria 1911
144 Ga0501033_0024818 3300049570 Bacteria 4521
145 Ga0501036_0279956 3300049572 Bacteria 1396
146 Ga0501047_0028113 3300049581 Bacteria 5420
147 Ga0501048_0122751 3300049582 Bacteria 1836
148 Ga0501035_0112461 3300049822 Bacteria 2386
149 Ga0501044_0007943 3300049823 Bacteria 11662
150 Ga0501044_0137232 3300049823 Bacteria 2436
151 nmdc:mga06z11_38626_c1 3300050494 Bacteria 2372
152 Ga0500644_0061110 3300053088 Bacteria 1327
153 Ga0500572_003922 3300053111 Bacteria 3382
154 Ga0500614_021002 3300053123 Bacteria 1512
155 Ga0500600_0110999 3300053149 Bacteria 1430
156 Ga0466962_0008467 3300061719 Bacteria 4929
157 Ga0466962_0033295 3300061719 Bacteria 2465
158 2585312993 2582581314 Bacteria 11452267
159 2644266038 2643221647 Bacteria 10741251
160 2644628089 2643221714 Bacteria 9015452
161 2785342262 2784746763 Bacteria 9783172
162 2785370391 2784746768 Bacteria 10036182
163 2808921317 2808606375 Bacteria 9466072
164 2862286559 2862281513 Bacteria 9621493
165 2867430855 2867428634 Bacteria 9590268
166 2877680216 2877676314 Bacteria 9512378
167 2912731145 2912723979 Bacteria 8557534
168 2919471389 2919468124 Bacteria 9133025
169 2935392772 2935390628 Bacteria 7043367
170 2946076724 2946072368 Bacteria 8999607
171 2954006232 2954002825 Bacteria 9173742
172 2954385204 2954380949 Bacteria 10050426
173 2954677846 2954673503 Bacteria 9685905
174 2954686310 2954682443 Bacteria 9862841
175 2954695987 2954691527 Bacteria 10720516
176 2954711158 2954701450 Bacteria 10834262
177 2954715393 2954711539 Bacteria 10867210
178 2954725313 2954721474 Bacteria 10456478
179 2954736502 2954731030 Bacteria 10243860
180 2954744247 2954740390 Bacteria 10229294
181 2954755331 2954749733 Bacteria 10366972
182 2954763213 2954759201 Bacteria 9358192
183 2990066676 2990059506 Bacteria 9321252
184 3006399866 3006393351 Bacteria 6615579
185 3006492748 3006486233 Bacteria 8157040
186 8048410102 8048406513 Bacteria 8936924
187 8056833160 8056829672 Bacteria 9045328
188 Ga0307509_10081609
189 rootL2_10058403
190 rootH1_10109988
191 Ga0006562J51391_1214708
192 Ga0006562J51391_1214709
193 Ga0068853_100025230
194 Ga0075367_10013839
195 Ga0105245_10067275
196 Ga0105245_10143774
197 Ga0105238_10106231
198 Ga0105239_10879585
199 Ga0105246_10003160
200 Ga0105246_10037244
201 Ga0105246_10063671
202 Ga0157369_10057403
203 Ga0157372_10198920
204 Ga0183367_1015
205 Ga0207694_10392103
206 Ga0207687_10215316
207 Ga0207691_10474876
208 Ga0207639_10188347
209 Ga0209371_1008960
210 Ga0209813_10013298
211 Ga0268256_1009282
212 Ga0307511_10001695
213 Ga0307511_10046082
214 Ga0307511_10073836
215 Ga0307512_10000978
216 Ga0307513_10033014
217 Ga0307509_10029556
218 Ga0307509_10174553
219 Ga0307508_10074613
220 Ga0307514_10093041
221 Ga0307516_10088303
222 Ga0307518_10057419
223 Ga0307507_10063265
224 Ga0307510_10034909
225 Ga0395900_0023434
226 Ga0395900_0044010
227 Ga0395898_0020600
228 Ga0395898_0025765
229 Ga0395898_0059925
230 Ga0439436_0000868
231 Ga0439436_0032553
232 Ga0451853_1278555
233 Ga0451853_2803358
234 Ga0439433_0005409
235 Ga0439433_0011598
236 Ga0439442_004413
237 Ga0439442_009919
238 Ga0439448_0013891
239 Ga0439432_063563
240 Ga0439449_0002606
241 Ga0439449_0014561
242 Ga0439455_0001235
243 Ga0439457_000429
244 Ga0450894_001039
245 Ga0450895_007328
246 Ga0450896_000310
247 Ga0450898_015701
248 Ga0450898_034288
249 Ga0450903_002007
250 Ga0450906_000129
251 Ga0439458_0000126
252 Ga0466969_0015959
253 Ga0466969_0085623
254 Ga0466972_0006168
255 Ga0466972_0021288
256 Ga0466972_0025955
257 Ga0466965_0000887
258 Ga0466966_0003462
259 Ga0466966_0012932
260 Ga0466961_0044009
261 Ga0466961_0065790
262 Ga0466963_0000577
263 Ga0466964_0016797
264 Ga0466971_0014221
265 Ga0466971_0024050
266 Ga0466968_0018196
267 Ga0466970_0003285
268 Ga0466957_0001137
269 Ga0466960_0110654
270 Ga0466959_0117020
271 Ga0466958_0026783
272 Ga0466958_0277206
273 Ga0466967_0023806
274 Ga0495592_0003591
275 Ga0495603_0071823
276 Ga0495629_0049136
277 Ga0495638_0206079
278 Ga0495651_0040996
279 Ga0495582_0019152
280 Ga0495662_0015278
281 Ga0495664_0001242
282 Ga0495585_0058895
283 Ga0495594_0046558
284 Ga0495618_0253997
285 Ga0495620_0081716
286 Ga0495628_0039995
287 Ga0495652_0010249
288 Ga0495640_0065776
289 Ga0495587_0034672
290 Ga0495622_0020000
291 Ga0495668_0117403
292 Ga0495634_0004615
293 Ga0495611_0007737
294 Ga0495625_0002645
295 Ga0495635_0000630
296 Ga0495588_0001717
297 Ga0495588_0036196
298 Ga0495657_0002765
299 Ga0495646_0000669
300 Ga0495613_0005879
301 Ga0495613_0045585
302 Ga0495624_0082808
303 Ga0495670_0019746
304 Ga0495670_0026594
305 Ga0495671_0002799
306 Ga0495649_0118202
307 Ga0495589_0070434
308 Ga0495600_0132812
309 Ga0495581_0005833
310 Ga0495581_0027328
311 Ga0495604_0000597
312 Ga0495636_0014721
313 Ga0495636_0018570
314 Ga0495636_0019576
315 Ga0495676_0019814
316 Ga0495683_0083978
317 Ga0495687_003104
318 Ga0495687_003604
319 Ga0495675_0009811
320 Ga0495685_002780
321 Ga0495685_008876
322 Ga0495685_016047
323 Ga0495685_019001
324 Ga0495685_028262
325 Ga0495685_040285
326 Ga0495681_0011323
327 Ga0495686_0156393
328 Ga0495602_0004911
329 Ga0495614_0028976
330 Ga0496109_0193464
331 Ga0501033_0024818
332 Ga0501036_0279956
333 Ga0501047_0028113
334 Ga0501048_0122751
335 Ga0501035_0112461
336 Ga0501044_0007943
337 Ga0501044_0137232
338 nmdc:mga06z11_38626_c1
339 Ga0500644_0061110
340 Ga0500572_003922
341 Ga0500614_021002
342 Ga0500600_0110999
343 Ga0466962_0008467
344 Ga0466962_0033295
345 2585312993
346 2644266038
347 2644628089
348 2785342262
349 2785370391
350 2808921317
351 2862286559
352 2867430855
353 2877680216
354 2912731145
355 2919471389
356 2935392772
357 2946076724
358 2954006232
359 2954385204
360 2954677846
361 2954686310
362 2954695987
363 2954711158
364 2954715393
365 2954725313
366 2954736502
367 2954744247
368 2954755331
369 2954763213
370 2990066676
371 3006399866
372 3006492748
373 8048410102
374 8056833160

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01909

NTP_transf_2

Nucleotidyltransferase domain

54

127

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
6nf8-assembly1.cif.gz_C structure of human mitochondrial translation initiation factor 3 bound to the small ribosomal subunit -class i 0.7563 34 114
7pnw-assembly1.cif.gz_C mouse mitochondrial ribosome small subunit lacking m5u modification 0.7194 38 114
7bxo-assembly1.cif.gz_A crystal structure of the toxin-antitoxin with amp-pnp 0.7033 39 145
3byr-assembly1.cif.gz_A-2 mode of action of a putative zinc transporter czrb (zn form) 0.7007 23 116
3byp-assembly1.cif.gz_B mode of action of a putative zinc transporter czrb 0.6967 30 115
ID Description Score Start End Superfamily
af_Q58021_1_93_3.30.460.10 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2;Beta Polymerase, domain 2 0.8653 32 118 3.30.460.10
af_Q57606_1_96_3.30.460.10 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2;Beta Polymerase, domain 2 0.8538 34 116 3.30.460.10
af_Q2FZT0_1_88_3.30.300.130 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;Fe-S cluster assembly (FSCA) 0.7887 71 112 3.30.300.130
af_Q58701_1_124_3.30.460.10 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2;Beta Polymerase, domain 2 0.7553 25 142 3.30.460.10
af_Q8L725_368_471_3.30.70.1350 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Cation efflux protein, cytoplasmic domain 0.7393 25 112 3.30.70.1350
ID Description Score Start End GO Terms
AF-Q82EM3-F1-model_v4 Polymerase nucleotidyl transferase domain-containing protein 0.9906 9 275 GO:0016779
AF-A0A840W517-F1-model_v4 Putative nucleotidyltransferase 0.9904 12 275 GO:0016779
AF-A0A1H9ID31-F1-model_v4 Nucleotidyltransferase domain-containing protein 0.989 29 275 GO:0016779
AF-A0A3N6CN88-F1-model_v4 Polymerase nucleotidyl transferase domain-containing protein 0.987 10 275
AF-A0A6G3S197-F1-model_v4 Nucleotidyltransferase 0.9862 12 274 GO:0016779

Map