F287869

General Info

Members Datasets Scaffolds Average Seq Length
187 136 374 926

Family's Representative Sequence

Representative Sequence 3300030760|Ga0265762_1000314|Ga0265762_10003143
Length 1038
Sequence MRHACPATWPDKTICAEVYYDLAAKKRKNVIFITSSADLPRSTIPSSTLGIIPKRPYYYPMRRYLLPLCAVCLSTAVFLPAQSPQAPSSSSVPAKANNGADAAQTDPANITALPKSEEPKRDYSQEAFVVEQYRSTYRFESDGTGRRETVARIRVQSEAGVQQWGQIQVGYNSANERVEISYVRVVKADGSIVKAGDDAVQDISAPVEREAPVYTDYRQKHITVPGLRPGEILEYDIVTVIHTPLAANQFWTEYDFDKNNIMLDEEVDVDIPADRPIKMKNKAGLDPKITDANGRRIYHWTSSHLERDERPDIQLTTFVSWEQIGRWYASLDKDRRAPSPEVRAKAEELTKGISKDNELDKVQALYDYVAKNFRYVSLSLGLGRYQPHAASDVLHNQYGDCKDKHTLLASLLEAEGLHASSVLINSSRKLDPDVPSPSQFDHVITMLPMGKEEVWMDTTSEVAPFRLLAYTLRNKLALVIPVDGTPHLENTPAGTPMPDSEVSEVDGKVNEIGKLEAHVHYAFRGDEELMLRSVFRRVPEAQWQRVVENVNAGMGGEISHVKISDPAATREPFTMSYDVAKPNFLDWSKKKSDLTLPLCQFNLPDIGSIDDENDDAEPLKLGPKAEYTYKITLELPAKYTARAPLPFSLKRDYAEYQATYKLEGSTFTAARTLTMRQDELPTQRASDYQAFRHAVGSDLGQVLSVENTVAGPAAPPADMKADELVESARAAMSSGNFAMAVQVLKRATEVEPKNKYAWNALAAAYLGMRQNDDEISATPLVWNNIAYQLSLKKAHLDRAQQYAESAVSATTAALRNLSLDRLTPQDLPLVPSLIAYWDTLGWVYFSEGNLDKAERYVAAAWSLGQHGEVGDHLGQIYEKQGKKDRALSTYQLALAGLRPIPETQERIDALRKTDSKAGAKGNSKSPEKIEAATQQAKEDLQSLRTIDLGKAKDAGSAEFFVLLNGGASTPVKAESVRFVSGDEKLKIFSDALRTAQYHATFPDDVPVKILRRGTLSCSSETGKCMFVLILPDDVRTVD

Samples

Sample ID Description Type Environment
1 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
2 3300000546 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled Metagenome Rhizosphere
3 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
4 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
5 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
6 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
7 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
8 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
9 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
10 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
11 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
16 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
17 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
18 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
19 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
20 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
21 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
22 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
25 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
26 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
27 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
28 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
29 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
32 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
33 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
34 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
35 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
36 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
37 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
40 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
41 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
42 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
43 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
44 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
46 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
47 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
48 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
50 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
51 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
54 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
55 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
56 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
57 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
58 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
59 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
60 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
61 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
62 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
63 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
64 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
65 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
66 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
67 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
68 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
69 3300022732 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU1 Metagenome Rhizosphere
70 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
71 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
105 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
106 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
107 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
108 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
109 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
110 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
111 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
112 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
113 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
114 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
115 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
116 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
117 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
118 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
119 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
120 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
121 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
122 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
123 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
124 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
125 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
126 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
127 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
128 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
129 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
130 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
131 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
132 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
133 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
134 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
135 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
136 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.33
Metatranscriptomes 2.67
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 4.28
Rhizosphere 95.72
Stem 0
Stem Tuber 0
Unclassified 4.81

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265762_1000314 3300030760 Bacteria 8214
2 LJNas_1000654 3300000546 Bacteria 5835
3 JGI24034J26672_10000907 3300002239 Bacteria 3852
4 JGI24751J29686_10000079 3300002459 Bacteria 55464
5 Ga0065704_10078869 3300005289 Bacteria 4313
6 Ga0065712_10070180 3300005290 Archaea 6251
7 Ga0065707_10002633 3300005295 Bacteria 4405
8 Ga0070676_10015033 3300005328 Bacteria 4264
9 Ga0070683_100003585 3300005329 Bacteria 12635
10 Ga0070670_100000095 3300005331 Bacteria 83302
11 Ga0070670_100010358 3300005331 Bacteria 7956
12 Ga0070660_100007601 3300005339 Bacteria 7554
13 Ga0070689_100015410 3300005340 Bacteria 5573
14 Ga0070661_100008502 3300005344 Bacteria 7101
15 Ga0070675_100043257 3300005354 Bacteria 3680
16 Ga0070659_100037261 3300005366 Bacteria 3790
17 Ga0070709_10008838 3300005434 Bacteria 5545
18 Ga0070714_100000202 3300005435 Bacteria 48105
19 Ga0070714_100011358 3300005435 Bacteria 7065
20 Ga0070713_100000177 3300005436 Bacteria 42735
21 Ga0070713_100001689 3300005436 Bacteria 14187
22 Ga0070713_100007036 3300005436 Bacteria 7857
23 Ga0070713_100013176 3300005436 Bacteria 6096
24 Ga0070710_10000350 3300005437 Bacteria 21784
25 Ga0070711_100000186 3300005439 Bacteria 32876
26 Ga0070708_100000137 3300005445 Bacteria 50233
27 Ga0070708_100008701 3300005445 Bacteria 8156
28 Ga0070662_100030954 3300005457 Bacteria 3750
29 Ga0070681_10000247 3300005458 Bacteria 42975
30 Ga0070706_100001324 3300005467 Bacteria 26322
31 Ga0070706_100017051 3300005467 Bacteria 6709
32 Ga0070707_100000651 3300005468 Bacteria 34704
33 Ga0070707_100014471 3300005468 Bacteria 7393
34 Ga0070707_100056413 3300005468 Unclassified 3768
35 Ga0070699_100000439 3300005518 Bacteria 39981
36 Ga0070684_100041485 3300005535 Unclassified 3968
37 Ga0068853_100011546 3300005539 Bacteria 7180
38 Ga0070672_100016944 3300005543 Bacteria 5230
39 Ga0068855_100002700 3300005563 Bacteria 21863
40 Ga0070664_100009649 3300005564 Bacteria 7831
41 Ga0068857_100039235 3300005577 Bacteria 4194
42 Ga0068854_100025701 3300005578 Bacteria 4040
43 Ga0068856_100001556 3300005614 Bacteria 24005
44 Ga0068856_100009338 3300005614 Bacteria 9525
45 Ga0068856_100035318 3300005614 Bacteria 4898
46 Ga0068856_100040205 3300005614 Unclassified 4592
47 Ga0068852_100002799 3300005616 Bacteria 12085
48 Ga0068852_100029877 3300005616 Bacteria 4480
49 Ga0068859_100025976 3300005617 Bacteria 5875
50 Ga0068859_100051520 3300005617 Bacteria 4137
51 Ga0068866_10001708 3300005718 Bacteria 9243
52 Ga0068858_100037809 3300005842 Bacteria 4476
53 Ga0068862_100003951 3300005844 Bacteria 12598
54 Ga0081539_10001579 3300005985 Bacteria 37669
55 Ga0070717_10005991 3300006028 Bacteria 8904
56 Ga0070717_10010606 3300006028 Bacteria 6964
57 Ga0070716_100000499 3300006173 Bacteria 16326
58 Ga0070712_100000089 3300006175 Bacteria 45999
59 Ga0097621_100010777 3300006237 Bacteria 6706
60 Ga0097621_100016325 3300006237 Bacteria 5610
61 Ga0068871_100005238 3300006358 Bacteria 9074
62 Ga0075434_100002333 3300006871 Bacteria 16619
63 Ga0075434_100012424 3300006871 Bacteria 8075
64 Ga0075434_100064888 3300006871 Bacteria 3636
65 Ga0075436_100012850 3300006914 Bacteria 5739
66 Ga0097620_100025974 3300006931 Bacteria 5875
67 Ga0097620_100051518 3300006931 Bacteria 4137
68 Ga0075435_100001436 3300007076 Bacteria 15312
69 Ga0105240_10010592 3300009093 Bacteria 12956
70 Ga0105240_10017518 3300009093 Bacteria 9651
71 Ga0111539_10039079 3300009094 Bacteria 5722
72 Ga0114129_10064920 3300009147 Bacteria 5095
73 Ga0114129_10120214 3300009147 Bacteria 3618
74 Ga0105241_10001208 3300009174 Bacteria 19733
75 Ga0105241_10009271 3300009174 Bacteria 7238
76 Ga0105241_10018481 3300009174 Bacteria 5128
77 Ga0105242_10004119 3300009176 Bacteria 11313
78 Ga0105248_10012793 3300009177 Bacteria 9257
79 Ga0105237_10037845 3300009545 Bacteria 4874
80 Ga0105238_10001061 3300009551 Bacteria 27757
81 Ga0157373_10000999 3300013100 Bacteria 21871
82 Ga0157373_10008929 3300013100 Bacteria 7414
83 Ga0157371_10013192 3300013102 Bacteria 6289
84 Ga0157370_10010470 3300013104 Bacteria 9766
85 Ga0157370_10026969 3300013104 Bacteria 5666
86 Ga0157369_10000258 3300013105 Bacteria 72711
87 Ga0157369_10005999 3300013105 Bacteria 14115
88 Ga0157369_10007015 3300013105 Bacteria 12999
89 Ga0157369_10020422 3300013105 Bacteria 7403
90 Ga0157374_10001847 3300013296 Bacteria 17826
91 Ga0157378_10011579 3300013297 Bacteria 7723
92 Ga0157372_10000335 3300013307 Bacteria 51775
93 Ga0157372_10002129 3300013307 Bacteria 21514
94 Ga0157372_10008132 3300013307 Bacteria 11154
95 Ga0163163_10000026 3300014325 Bacteria 179198
96 Ga0163163_10001892 3300014325 Bacteria 17700
97 Ga0182008_10009521 3300014497 Bacteria 5239
98 Ga0157376_10010187 3300014969 Bacteria 6866
99 Ga0163161_10006561 3300017792 Bacteria 8053
100 Ga0224569_100342 3300022732 Unclassified 3929
101 Ga0228598_1002010 3300024227 Unclassified 4439
102 Ga0207692_10000653 3300025898 Bacteria 12208
103 Ga0207645_10002827 3300025907 Bacteria 13478
104 Ga0207643_10000391 3300025908 Bacteria 29201
105 Ga0207684_10003707 3300025910 Bacteria 14797
106 Ga0207684_10010612 3300025910 Bacteria 8097
107 Ga0207684_10019251 3300025910 Bacteria 5841
108 Ga0207654_10003353 3300025911 Bacteria 8107
109 Ga0207707_10006370 3300025912 Bacteria 10301
110 Ga0207695_10011486 3300025913 Bacteria 10719
111 Ga0207693_10000082 3300025915 Bacteria 85372
112 Ga0207693_10005313 3300025915 Bacteria 10759
113 Ga0207693_10005479 3300025915 Bacteria 10581
114 Ga0207663_10000571 3300025916 Bacteria 16247
115 Ga0207657_10003255 3300025919 Bacteria 17389
116 Ga0207649_10000250 3300025920 Bacteria 43495
117 Ga0207652_10014298 3300025921 Bacteria 6429
118 Ga0207646_10000494 3300025922 Bacteria 52791
119 Ga0207694_10000284 3300025924 Bacteria 47825
120 Ga0207650_10000006 3300025925 Bacteria 544730
121 Ga0207650_10000124 3300025925 Bacteria 97031
122 Ga0207700_10000343 3300025928 Bacteria 27314
123 Ga0207700_10008638 3300025928 Bacteria 6324
124 Ga0207700_10012032 3300025928 Bacteria 5556
125 Ga0207700_10035536 3300025928 Unclassified 3590
126 Ga0207664_10000461 3300025929 Bacteria 28840
127 Ga0207664_10002676 3300025929 Bacteria 11820
128 Ga0207664_10005901 3300025929 Bacteria 8379
129 Ga0207644_10010911 3300025931 Bacteria 6001
130 Ga0207706_10006099 3300025933 Bacteria 11189
131 Ga0207665_10000091 3300025939 Bacteria 58755
132 Ga0207665_10006405 3300025939 Bacteria 7810
133 Ga0207691_10041908 3300025940 Bacteria 4223
134 Ga0207679_10000084 3300025945 Bacteria 82946
135 Ga0207667_10000487 3300025949 Bacteria 52501
136 Ga0207651_10006042 3300025960 Bacteria 6287
137 Ga0207702_10001300 3300026078 Bacteria 25014
138 Ga0207641_10000006 3300026088 Bacteria 442569
139 Ga0207648_10003233 3300026089 Bacteria 17155
140 Ga0207676_10000615 3300026095 Bacteria 29142
141 Ga0207674_10001059 3300026116 Bacteria 35825
142 Ga0207675_100012837 3300026118 Bacteria 7823
143 Ga0207683_10004329 3300026121 Bacteria 12262
144 Ga0268265_10034325 3300028380 Bacteria 3697
145 Ga0268264_10018430 3300028381 Archaea 5708
146 Ga0265338_10011465 3300028800 Bacteria 10235
147 Ga0265762_1000729 3300030760 Bacteria 5846
148 Ga0265762_1000891 3300030760 Bacteria 5315
149 Ga0265760_10002044 3300031090 Bacteria 5940
150 Ga0265760_10002559 3300031090 Bacteria 5315
151 Ga0265340_10000837 3300031247 Bacteria 17514
152 Ga0265339_10007921 3300031249 Bacteria 6814
153 Ga0265331_10003235 3300031250 Bacteria 10611
154 Ga0265313_10003710 3300031595 Bacteria 12161
155 Ga0265314_10016455 3300031711 Bacteria 5840
156 Ga0265342_10005885 3300031712 Bacteria 9251
157 Ga0373923_0000229 3300035111 Bacteria 11793
158 Ga0373946_0001931 3300035171 Bacteria 7238
159 Ga0373935_0013609 3300035692 Bacteria 4911
160 Ga0373927_0000459 3300035695 Bacteria 31193
161 Ga0373947_0000089 3300035725 Bacteria 46049
162 Ga0373925_0012794 3300037068 Bacteria 6078
163 Ga0373925_0021637 3300037068 Unclassified 4688
164 Ga0495629_0004799 3300046459 Bacteria 10139
165 Ga0495580_0001297 3300046472 Bacteria 22071
166 Ga0495580_0007160 3300046472 Bacteria 8981
167 Ga0495580_0008213 3300046472 Bacteria 8309
168 Ga0495582_0007400 3300046473 Bacteria 6080
169 Ga0495669_0007438 3300046684 Unclassified 4593
170 Ga0495674_0020557 3300047319 Bacteria 6110
171 Ga0495684_0046723 3300047471 Bacteria 3312
172 Ga0496102_0013138 3300048905 Bacteria 7165
173 Ga0496105_0019329 3300048908 Bacteria 5494
174 Ga0496108_0000200 3300048911 Bacteria 55323
175 Ga0496109_0000149 3300048912 Bacteria 68979
176 Ga0496110_0001586 3300048913 Bacteria 16619
177 Ga0496112_0000070 3300048915 Bacteria 67934
178 Ga0496112_0006299 3300048915 Bacteria 10412
179 Ga0496113_0001103 3300048916 Bacteria 14626
180 nmdc:mga08y16_4291_c1 3300050511 Bacteria 14883
181 nmdc:mga0n895_21789_c1 3300050512 Bacteria 5998
182 nmdc:mga0n895_753_c1 3300050512 Bacteria 22907
183 nmdc:mga0rr50_2451_c1 3300050513 Bacteria 10470
184 nmdc:mga08x19_30815_c1 3300050514 Bacteria 3371
185 nmdc:mga0a205_29078_c1 3300050515 Bacteria 5287
186 nmdc:mga0a205_4504_c1 3300050515 Bacteria 12501
187 Ga0530510_0022728 3300061734 Unclassified 4468
188 Ga0265762_1000314
189 LJNas_1000654
190 JGI24034J26672_10000907
191 JGI24751J29686_10000079
192 Ga0065704_10078869
193 Ga0065712_10070180
194 Ga0065707_10002633
195 Ga0070676_10015033
196 Ga0070683_100003585
197 Ga0070670_100000095
198 Ga0070670_100010358
199 Ga0070660_100007601
200 Ga0070689_100015410
201 Ga0070661_100008502
202 Ga0070675_100043257
203 Ga0070659_100037261
204 Ga0070709_10008838
205 Ga0070714_100000202
206 Ga0070714_100011358
207 Ga0070713_100000177
208 Ga0070713_100001689
209 Ga0070713_100007036
210 Ga0070713_100013176
211 Ga0070710_10000350
212 Ga0070711_100000186
213 Ga0070708_100000137
214 Ga0070708_100008701
215 Ga0070662_100030954
216 Ga0070681_10000247
217 Ga0070706_100001324
218 Ga0070706_100017051
219 Ga0070707_100000651
220 Ga0070707_100014471
221 Ga0070707_100056413
222 Ga0070699_100000439
223 Ga0070684_100041485
224 Ga0068853_100011546
225 Ga0070672_100016944
226 Ga0068855_100002700
227 Ga0070664_100009649
228 Ga0068857_100039235
229 Ga0068854_100025701
230 Ga0068856_100001556
231 Ga0068856_100009338
232 Ga0068856_100035318
233 Ga0068856_100040205
234 Ga0068852_100002799
235 Ga0068852_100029877
236 Ga0068859_100025976
237 Ga0068859_100051520
238 Ga0068866_10001708
239 Ga0068858_100037809
240 Ga0068862_100003951
241 Ga0081539_10001579
242 Ga0070717_10005991
243 Ga0070717_10010606
244 Ga0070716_100000499
245 Ga0070712_100000089
246 Ga0097621_100010777
247 Ga0097621_100016325
248 Ga0068871_100005238
249 Ga0075434_100002333
250 Ga0075434_100012424
251 Ga0075434_100064888
252 Ga0075436_100012850
253 Ga0097620_100025974
254 Ga0097620_100051518
255 Ga0075435_100001436
256 Ga0105240_10010592
257 Ga0105240_10017518
258 Ga0111539_10039079
259 Ga0114129_10064920
260 Ga0114129_10120214
261 Ga0105241_10001208
262 Ga0105241_10009271
263 Ga0105241_10018481
264 Ga0105242_10004119
265 Ga0105248_10012793
266 Ga0105237_10037845
267 Ga0105238_10001061
268 Ga0157373_10000999
269 Ga0157373_10008929
270 Ga0157371_10013192
271 Ga0157370_10010470
272 Ga0157370_10026969
273 Ga0157369_10000258
274 Ga0157369_10005999
275 Ga0157369_10007015
276 Ga0157369_10020422
277 Ga0157374_10001847
278 Ga0157378_10011579
279 Ga0157372_10000335
280 Ga0157372_10002129
281 Ga0157372_10008132
282 Ga0163163_10000026
283 Ga0163163_10001892
284 Ga0182008_10009521
285 Ga0157376_10010187
286 Ga0163161_10006561
287 Ga0224569_100342
288 Ga0228598_1002010
289 Ga0207692_10000653
290 Ga0207645_10002827
291 Ga0207643_10000391
292 Ga0207684_10003707
293 Ga0207684_10010612
294 Ga0207684_10019251
295 Ga0207654_10003353
296 Ga0207707_10006370
297 Ga0207695_10011486
298 Ga0207693_10000082
299 Ga0207693_10005313
300 Ga0207693_10005479
301 Ga0207663_10000571
302 Ga0207657_10003255
303 Ga0207649_10000250
304 Ga0207652_10014298
305 Ga0207646_10000494
306 Ga0207694_10000284
307 Ga0207650_10000006
308 Ga0207650_10000124
309 Ga0207700_10000343
310 Ga0207700_10008638
311 Ga0207700_10012032
312 Ga0207700_10035536
313 Ga0207664_10000461
314 Ga0207664_10002676
315 Ga0207664_10005901
316 Ga0207644_10010911
317 Ga0207706_10006099
318 Ga0207665_10000091
319 Ga0207665_10006405
320 Ga0207691_10041908
321 Ga0207679_10000084
322 Ga0207667_10000487
323 Ga0207651_10006042
324 Ga0207702_10001300
325 Ga0207641_10000006
326 Ga0207648_10003233
327 Ga0207676_10000615
328 Ga0207674_10001059
329 Ga0207675_100012837
330 Ga0207683_10004329
331 Ga0268265_10034325
332 Ga0268264_10018430
333 Ga0265338_10011465
334 Ga0265762_1000729
335 Ga0265762_1000891
336 Ga0265760_10002044
337 Ga0265760_10002559
338 Ga0265340_10000837
339 Ga0265339_10007921
340 Ga0265331_10003235
341 Ga0265313_10003710
342 Ga0265314_10016455
343 Ga0265342_10005885
344 Ga0373923_0000229
345 Ga0373946_0001931
346 Ga0373935_0013609
347 Ga0373927_0000459
348 Ga0373947_0000089
349 Ga0373925_0012794
350 Ga0373925_0021637
351 Ga0495629_0004799
352 Ga0495580_0001297
353 Ga0495580_0007160
354 Ga0495580_0008213
355 Ga0495582_0007400
356 Ga0495669_0007438
357 Ga0495674_0020557
358 Ga0495684_0046723
359 Ga0496102_0013138
360 Ga0496105_0019329
361 Ga0496108_0000200
362 Ga0496109_0000149
363 Ga0496110_0001586
364 Ga0496112_0000070
365 Ga0496112_0006299
366 Ga0496113_0001103
367 nmdc:mga08y16_4291_c1
368 nmdc:mga0n895_21789_c1
369 nmdc:mga0n895_753_c1
370 nmdc:mga0rr50_2451_c1
371 nmdc:mga08x19_30815_c1
372 nmdc:mga0a205_29078_c1
373 nmdc:mga0a205_4504_c1
374 Ga0530510_0022728

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12969

DUF3857

Domain of Unknown Function with PDB structure (DUF3857)

141

308

0.97

PF13181

TPR_8

Tetratricopeptide repeat

871

895

0.94

PF13176

TPR_7

Tetratricopeptide repeat

871

905

0.87

PF01841

Transglut_core

Transglutaminase-like superfamily

343

446

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
4pdx-assembly1.cif.gz_B crystal structure of escherchia coli uncharacterized protein yjcs 0.9512 647 693
4pdx-assembly1.cif.gz_A crystal structure of escherchia coli uncharacterized protein yjcs 0.9506 647 693
2cg2-assembly1.cif.gz_A-2 crystal structure of sdsa1, an alkylsulfatase from pseudomonas aeruginosa, in complex with sulfate 0.8909 647 692
1na3-assembly2.cif.gz_B design of stable alpha-helical arrays from an idealized tpr motif 0.8895 646 714
2cfz-assembly1.cif.gz_A-2 crystal structure of sdsa1, an alkylsulfatase from pseudomonas aeruginosa, in complex with 1-dodecanol 0.8863 647 692
ID Description Score Start End Superfamily
af_Q4DCN5_349_413_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9807 645 690 1.25.40.10
af_Q56A06_761_830_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9756 646 695 1.25.40.10
af_F1M369_760_830_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9741 646 695 1.25.40.10
af_Q9V3X5_873_937_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9597 645 690 1.25.40.10
af_A0A1D6HXK8_1_62_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9211 646 696 1.25.40.10
ID Description Score Start End GO Terms
AF-A0A2V9RXK9-F1-model_v4 Uncharacterized protein 0.9639 178 422
AF-A0A2M7NS14-F1-model_v4 DUF3857 domain-containing protein 0.9464 57 176
AF-A0A7X9P6J0-F1-model_v4 DUF3857 domain-containing protein 0.92 56 248
AF-A0A519YSS3-F1-model_v4 Peptidase S74 domain-containing protein 0.9082 267 383 GO:0003700
GO:0016540
GO:0043565
GO:0045893
AF-X1MKA2-F1-model_v4 Transglutaminase-like domain-containing protein 0.908 194 463

Map