F286737

General Info

Members Datasets Scaffolds Average Seq Length
186 135 372 387

Family's Representative Sequence

Representative Sequence 3300049823|Ga0501044_0004272|Ga0501044_0004272_7319_8557
Length 412
Sequence MPSERLASPPGRWRDVARATGVHPPDGAVAATVFAEMSALAARTGALNLGQGFPDVDGPAWIRRAAADAIAPDAEHGANQYPPGPGIPALREAVAAHQQRHYGLSLDPDTQVLVTTGATEALAAALLALAGPGDDVVTLEPFYDSYAAGIALAGARHVTVPLVPGPAGFRLDTEALRAAVTPRTRVILLNTPHNPTGTVLTRAELEAVAAAAREVDAVVVTDEVYEHLTFDGAAHVPVATLPGMAERTLTVSSSGKTFSLTGWKIGWVTGPEPLVTAVRTVKQFLTYVSGAPFQPAVARALADDAYPRELAASLAGRRDLLCDGLEAAGFAVVRPQGTYFVLADAAPLGFDDGTDLCRRLPGLAGVVGVPVSAFCTAGSPTGRSLRSWVRFTFVKREDVLRDAVGRLGALAR

Samples

Sample ID Description Type Environment
1 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
8 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
12 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
13 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
14 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
15 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
16 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
17 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
18 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
19 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
20 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
21 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
22 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
23 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
24 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
25 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
26 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
27 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
28 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
29 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
30 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
32 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
33 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
34 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
35 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
36 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
37 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
38 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
39 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
40 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
41 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
42 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
43 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
44 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
45 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
67 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
69 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
70 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
71 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
72 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
73 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
74 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
75 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
76 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
77 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
78 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
79 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
80 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
81 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
82 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
83 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
84 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
85 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
86 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
87 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
88 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
89 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
90 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
91 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
92 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
93 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
94 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
95 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
96 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
97 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
98 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
99 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
100 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
101 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
102 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
103 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
104 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
105 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
106 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
107 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
108 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
109 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
110 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
116 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
117 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
118 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
119 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
120 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
121 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
122 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
123 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
124 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
125 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
126 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
127 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
128 2643221690 Cellulomonas sp. Root485 Isolate Unclassified
129 2643221694 Cellulomonas sp. Root137 Isolate Unclassified
130 2643221722 Cellulomonas sp. Root930 Isolate Unclassified
131 2811994880 Cellulomonas sp. SLBN-39 Isolate Unclassified
132 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
133 2835188231 Isoptericola variabilis JZ7 Isolate Unclassified
134 2884994152 Cellulomonas sp. H30R-01 Isolate Rhizosphere
135 2887443736 Ruania rhizosphaerae LNNU 22110 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.7
Metatranscriptomes 0
Isolates 4.3

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 8.06
Rhizosphere 83.87
Stem 0
Stem Tuber 0
Unclassified 0.54

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501044_0004272 3300049823 Bacteria 16027
2 JGI25406J46586_10016705 3300003203 Bacteria 3053
3 Ga0070658_10106346 3300005327 Bacteria 2321
4 Ga0068869_100152974 3300005334 Bacteria 1790
5 Ga0070682_100027535 3300005337 Bacteria 3411
6 Ga0070660_100000769 3300005339 Bacteria 21275
7 Ga0070691_10071246 3300005341 Bacteria 1687
8 Ga0070692_10079525 3300005345 Bacteria 1763
9 Ga0070668_100012427 3300005347 Bacteria 6341
10 Ga0070714_100007610 3300005435 Bacteria 8434
11 Ga0070663_100192686 3300005455 Bacteria 1587
12 Ga0070662_100039330 3300005457 Bacteria 3363
13 Ga0070662_100080585 3300005457 Bacteria 2424
14 Ga0070684_100277740 3300005535 Bacteria 1534
15 Ga0070665_100119302 3300005548 Bacteria 2640
16 Ga0068857_100149989 3300005577 Bacteria 2112
17 Ga0068854_100115787 3300005578 Bacteria 2028
18 Ga0068854_100158981 3300005578 Bacteria 1748
19 Ga0068852_100014765 3300005616 Bacteria 6029
20 Ga0068852_100095510 3300005616 Bacteria 2670
21 Ga0068861_100322417 3300005719 Bacteria 1346
22 Ga0068851_10015906 3300005834 Bacteria 3592
23 Ga0068860_100122170 3300005843 Bacteria 2494
24 Ga0068860_100132065 3300005843 Bacteria 2397
25 Ga0081455_10001159 3300005937 Bacteria 33038
26 Ga0081455_10012233 3300005937 Bacteria 8568
27 Ga0081455_10045457 3300005937 Bacteria 3820
28 Ga0081455_10060415 3300005937 Bacteria 3196
29 Ga0081455_10116288 3300005937 Unclassified 2115
30 Ga0081455_10125068 3300005937 Bacteria 2019
31 Ga0081455_10128640 3300005937 Bacteria 1984
32 Ga0081538_10001286 3300005981 Bacteria 26081
33 Ga0081538_10023605 3300005981 Bacteria 4414
34 Ga0081539_10000127 3300005985 Bacteria 179934
35 Ga0070717_10300153 3300006028 Bacteria 1428
36 Ga0075433_10002552 3300006852 Bacteria 13866
37 Ga0075434_100009923 3300006871 Bacteria 8907
38 Ga0068865_100016506 3300006881 Bacteria 4727
39 Ga0075436_100001677 3300006914 Bacteria 15144
40 Ga0075435_100002810 3300007076 Bacteria 11643
41 Ga0111539_10003840 3300009094 Bacteria 19785
42 Ga0111539_10344661 3300009094 Bacteria 1734
43 Ga0105245_10011874 3300009098 Bacteria 7575
44 Ga0105247_10205900 3300009101 Bacteria 1324
45 Ga0105243_10004124 3300009148 Bacteria 11553
46 Ga0105243_10093261 3300009148 Bacteria 2484
47 Ga0105242_10122582 3300009176 Bacteria 2233
48 Ga0105249_10010183 3300009553 Bacteria 8256
49 Ga0105239_10103751 3300010375 Bacteria 3147
50 Ga0157370_10328139 3300013104 Bacteria 1411
51 Ga0157369_10129159 3300013105 Bacteria 2679
52 Ga0157369_10247179 3300013105 Bacteria 1862
53 Ga0163162_10012900 3300013306 Bacteria 8160
54 Ga0157372_10017490 3300013307 Bacteria 7693
55 Ga0157372_10322715 3300013307 Bacteria 1798
56 Ga0157372_10385603 3300013307 Bacteria 1633
57 Ga0157375_10136655 3300013308 Bacteria 2576
58 Ga0163163_10030733 3300014325 Bacteria 5178
59 Ga0157380_10127963 3300014326 Bacteria 2162
60 Ga0163161_10114917 3300017792 Bacteria 2017
61 Ga0207642_10006620 3300025899 Bacteria 3864
62 Ga0207688_10002173 3300025901 Bacteria 10559
63 Ga0207688_10068522 3300025901 Bacteria 2010
64 Ga0207645_10075075 3300025907 Bacteria 2164
65 Ga0207645_10099830 3300025907 Bacteria 1872
66 Ga0207643_10003786 3300025908 Bacteria 8133
67 Ga0207657_10016535 3300025919 Bacteria 7113
68 Ga0207657_10025079 3300025919 Bacteria 5506
69 Ga0207650_10216674 3300025925 Bacteria 1539
70 Ga0207687_10040965 3300025927 Bacteria 3178
71 Ga0207687_10198810 3300025927 Bacteria 1565
72 Ga0207706_10003656 3300025933 Bacteria 14692
73 Ga0207706_10020790 3300025933 Bacteria 5896
74 Ga0207706_10032135 3300025933 Bacteria 4674
75 Ga0207709_10019511 3300025935 Bacteria 3814
76 Ga0207669_10032709 3300025937 Bacteria 2925
77 Ga0207704_10108129 3300025938 Bacteria 1872
78 Ga0207689_10030660 3300025942 Bacteria 4481
79 Ga0207689_10301478 3300025942 Bacteria 1328
80 Ga0207712_10152657 3300025961 Bacteria 1786
81 Ga0207668_10029625 3300025972 Bacteria 3589
82 Ga0207658_10045035 3300025986 Bacteria 3215
83 Ga0207708_10016478 3300026075 Bacteria 5557
84 Ga0207641_10070728 3300026088 Bacteria 2999
85 Ga0207648_10026656 3300026089 Bacteria 5134
86 Ga0207676_10154836 3300026095 Bacteria 1978
87 Ga0207674_10109554 3300026116 Bacteria 2737
88 Ga0207675_100004013 3300026118 Bacteria 14273
89 Ga0207675_100109829 3300026118 Bacteria 2602
90 Ga0207428_10001176 3300027907 Bacteria 28190
91 Ga0268265_10011301 3300028380 Bacteria 6037
92 Ga0307408_100008015 3300031548 Bacteria 6983
93 Ga0307408_100128700 3300031548 Bacteria 1972
94 Ga0307405_10000455 3300031731 Bacteria 15376
95 Ga0307413_10000889 3300031824 Bacteria 10558
96 Ga0307413_10010864 3300031824 Bacteria 4441
97 Ga0307410_10004287 3300031852 Bacteria 7347
98 Ga0307410_10029380 3300031852 Bacteria 3500
99 Ga0307406_10001012 3300031901 Bacteria 15618
100 Ga0307406_10001254 3300031901 Bacteria 14241
101 Ga0307407_10003981 3300031903 Bacteria 6174
102 Ga0307407_10024392 3300031903 Bacteria 3171
103 Ga0307407_10042520 3300031903 Bacteria 2549
104 Ga0307412_10026124 3300031911 Bacteria 3626
105 Ga0307412_10044021 3300031911 Bacteria 2911
106 Ga0307412_10165538 3300031911 Bacteria 1648
107 Ga0307409_100000225 3300031995 Bacteria 22648
108 Ga0307409_100001216 3300031995 Bacteria 12387
109 Ga0307409_100149135 3300031995 Bacteria 2028
110 Ga0307409_100190016 3300031995 Bacteria 1827
111 Ga0307409_100215862 3300031995 Bacteria 1728
112 Ga0307409_100269293 3300031995 Bacteria 1568
113 Ga0307416_100000877 3300032002 Bacteria 15836
114 Ga0307416_100039457 3300032002 Bacteria 3656
115 Ga0307414_10000751 3300032004 Bacteria 16646
116 Ga0307411_10000196 3300032005 Bacteria 19531
117 Ga0307415_100000310 3300032126 Bacteria 21068
118 Ga0395899_0126344 3300037312 Bacteria 1829
119 Ga0395900_0048077 3300037418 Bacteria 4394
120 Ga0395905_0117622 3300037471 Bacteria 2498
121 Ga0451789_0160523 3300041443 Bacteria 1347
122 Ga0451791_1458330 3300041451 Bacteria 1252
123 Ga0451793_1554025 3300041452 Bacteria 1704
124 Ga0451802_0193023 3300041460 Bacteria 1405
125 Ga0451807_0512413 3300041486 Bacteria 1769
126 Ga0451837_0730049 3300041494 Bacteria 3616
127 Ga0439448_0004231 3300042005 Bacteria 4046
128 Ga0439450_012063 3300042008 Bacteria 1707
129 Ga0439463_000288 3300042016 Bacteria 14010
130 Ga0439463_007092 3300042016 Bacteria 2765
131 Ga0439435_0021575 3300042436 Bacteria 1674
132 Ga0439440_0009824 3300042993 Bacteria 1988
133 Ga0466972_0021391 3300044658 Bacteria 3225
134 Ga0466961_0112996 3300044693 Bacteria 1708
135 Ga0466971_0004151 3300044719 Bacteria 6246
136 Ga0495665_0137697 3300046531 Bacteria 1277
137 Ga0495598_0020266 3300046537 Bacteria 1754
138 Ga0495645_0116925 3300046543 Bacteria 1882
139 Ga0495672_0117786 3300047320 Bacteria 1417
140 Ga0496108_0158841 3300048911 Bacteria 1953
141 Ga0496109_0128700 3300048912 Bacteria 2362
142 Ga0496109_0139148 3300048912 Bacteria 2270
143 Ga0496109_0303236 3300048912 Bacteria 1506
144 Ga0496110_0029104 3300048913 Bacteria 4750
145 Ga0496110_0034237 3300048913 Bacteria 4399
146 Ga0496110_0260854 3300048913 Bacteria 1577
147 Ga0496111_0066865 3300048914 Bacteria 2610
148 Ga0496111_0238128 3300048914 Bacteria 1352
149 Ga0496114_0320404 3300048917 Bacteria 1370
150 Ga0496122_0001091 3300048925 Bacteria 47086
151 Ga0496122_0002434 3300048925 Bacteria 26462
152 Ga0496123_0000275 3300048926 Bacteria 101770
153 Ga0496123_0088792 3300048926 Bacteria 1844
154 Ga0496124_0001265 3300048927 Bacteria 38466
155 Ga0496124_0098459 3300048927 Bacteria 2373
156 Ga0496125_0000015 3300048928 Bacteria 516648
157 Ga0496125_0006642 3300048928 Bacteria 12447
158 Ga0501031_0045840 3300049568 Bacteria 2853
159 Ga0501034_0163886 3300049571 Bacteria 2192
160 Ga0501039_0032932 3300049575 Bacteria 3998
161 Ga0501047_0031014 3300049581 Bacteria 5155
162 Ga0501048_0143451 3300049582 Bacteria 1689
163 Ga0501070_0014996 3300049586 Bacteria 6521
164 Ga0501071_0261487 3300049587 Bacteria 1307
165 Ga0501072_0271591 3300049588 Bacteria 1349
166 Ga0501075_0336021 3300049591 Bacteria 1151
167 Ga0501080_0002369 3300049742 Bacteria 16440
168 Ga0501044_0134263 3300049823 Bacteria 2467
169 nmdc:mga09592_271992_c1 3300050508 Bacteria 1469
170 nmdc:mga08y16_287776_c1 3300050511 Bacteria 1694
171 nmdc:mga08y16_456024_c1 3300050511 Bacteria 1303
172 nmdc:mga08y16_6137_c1 3300050511 Bacteria 12599
173 nmdc:mga0n895_50960_c1 3300050512 Bacteria 4061
174 nmdc:mga0rr50_803_c1 3300050513 Bacteria 16935
175 nmdc:mga08x19_64773_c1 3300050514 Bacteria 2373
176 nmdc:mga0a205_4611_c1 3300050515 Bacteria 12358
177 Ga0495655_0028535 3300053083 Bacteria 1334
178 Ga0501084_0107084 3300054114 Bacteria 2348
179 2644505180 2643221690 Bacteria 4654705
180 2644527503 2643221694 Bacteria 4392972
181 2644667428 2643221722 Bacteria 4247614
182 2812362233 2811994880 Bacteria 4147780
183 2816506039 2816332139 Bacteria 9138787
184 2835189804 2835188231 Bacteria 3476928
185 2884994487 2884994152 Bacteria 4492978
186 2887447565 2887443736 Bacteria 4426037
187 Ga0501044_0004272
188 JGI25406J46586_10016705
189 Ga0070658_10106346
190 Ga0068869_100152974
191 Ga0070682_100027535
192 Ga0070660_100000769
193 Ga0070691_10071246
194 Ga0070692_10079525
195 Ga0070668_100012427
196 Ga0070714_100007610
197 Ga0070663_100192686
198 Ga0070662_100039330
199 Ga0070662_100080585
200 Ga0070684_100277740
201 Ga0070665_100119302
202 Ga0068857_100149989
203 Ga0068854_100115787
204 Ga0068854_100158981
205 Ga0068852_100014765
206 Ga0068852_100095510
207 Ga0068861_100322417
208 Ga0068851_10015906
209 Ga0068860_100122170
210 Ga0068860_100132065
211 Ga0081455_10001159
212 Ga0081455_10012233
213 Ga0081455_10045457
214 Ga0081455_10060415
215 Ga0081455_10116288
216 Ga0081455_10125068
217 Ga0081455_10128640
218 Ga0081538_10001286
219 Ga0081538_10023605
220 Ga0081539_10000127
221 Ga0070717_10300153
222 Ga0075433_10002552
223 Ga0075434_100009923
224 Ga0068865_100016506
225 Ga0075436_100001677
226 Ga0075435_100002810
227 Ga0111539_10003840
228 Ga0111539_10344661
229 Ga0105245_10011874
230 Ga0105247_10205900
231 Ga0105243_10004124
232 Ga0105243_10093261
233 Ga0105242_10122582
234 Ga0105249_10010183
235 Ga0105239_10103751
236 Ga0157370_10328139
237 Ga0157369_10129159
238 Ga0157369_10247179
239 Ga0163162_10012900
240 Ga0157372_10017490
241 Ga0157372_10322715
242 Ga0157372_10385603
243 Ga0157375_10136655
244 Ga0163163_10030733
245 Ga0157380_10127963
246 Ga0163161_10114917
247 Ga0207642_10006620
248 Ga0207688_10002173
249 Ga0207688_10068522
250 Ga0207645_10075075
251 Ga0207645_10099830
252 Ga0207643_10003786
253 Ga0207657_10016535
254 Ga0207657_10025079
255 Ga0207650_10216674
256 Ga0207687_10040965
257 Ga0207687_10198810
258 Ga0207706_10003656
259 Ga0207706_10020790
260 Ga0207706_10032135
261 Ga0207709_10019511
262 Ga0207669_10032709
263 Ga0207704_10108129
264 Ga0207689_10030660
265 Ga0207689_10301478
266 Ga0207712_10152657
267 Ga0207668_10029625
268 Ga0207658_10045035
269 Ga0207708_10016478
270 Ga0207641_10070728
271 Ga0207648_10026656
272 Ga0207676_10154836
273 Ga0207674_10109554
274 Ga0207675_100004013
275 Ga0207675_100109829
276 Ga0207428_10001176
277 Ga0268265_10011301
278 Ga0307408_100008015
279 Ga0307408_100128700
280 Ga0307405_10000455
281 Ga0307413_10000889
282 Ga0307413_10010864
283 Ga0307410_10004287
284 Ga0307410_10029380
285 Ga0307406_10001012
286 Ga0307406_10001254
287 Ga0307407_10003981
288 Ga0307407_10024392
289 Ga0307407_10042520
290 Ga0307412_10026124
291 Ga0307412_10044021
292 Ga0307412_10165538
293 Ga0307409_100000225
294 Ga0307409_100001216
295 Ga0307409_100149135
296 Ga0307409_100190016
297 Ga0307409_100215862
298 Ga0307409_100269293
299 Ga0307416_100000877
300 Ga0307416_100039457
301 Ga0307414_10000751
302 Ga0307411_10000196
303 Ga0307415_100000310
304 Ga0395899_0126344
305 Ga0395900_0048077
306 Ga0395905_0117622
307 Ga0451789_0160523
308 Ga0451791_1458330
309 Ga0451793_1554025
310 Ga0451802_0193023
311 Ga0451807_0512413
312 Ga0451837_0730049
313 Ga0439448_0004231
314 Ga0439450_012063
315 Ga0439463_000288
316 Ga0439463_007092
317 Ga0439435_0021575
318 Ga0439440_0009824
319 Ga0466972_0021391
320 Ga0466961_0112996
321 Ga0466971_0004151
322 Ga0495665_0137697
323 Ga0495598_0020266
324 Ga0495645_0116925
325 Ga0495672_0117786
326 Ga0496108_0158841
327 Ga0496109_0128700
328 Ga0496109_0139148
329 Ga0496109_0303236
330 Ga0496110_0029104
331 Ga0496110_0034237
332 Ga0496110_0260854
333 Ga0496111_0066865
334 Ga0496111_0238128
335 Ga0496114_0320404
336 Ga0496122_0001091
337 Ga0496122_0002434
338 Ga0496123_0000275
339 Ga0496123_0088792
340 Ga0496124_0001265
341 Ga0496124_0098459
342 Ga0496125_0000015
343 Ga0496125_0006642
344 Ga0501031_0045840
345 Ga0501034_0163886
346 Ga0501039_0032932
347 Ga0501047_0031014
348 Ga0501048_0143451
349 Ga0501070_0014996
350 Ga0501071_0261487
351 Ga0501072_0271591
352 Ga0501075_0336021
353 Ga0501080_0002369
354 Ga0501044_0134263
355 nmdc:mga09592_271992_c1
356 nmdc:mga08y16_287776_c1
357 nmdc:mga08y16_456024_c1
358 nmdc:mga08y16_6137_c1
359 nmdc:mga0n895_50960_c1
360 nmdc:mga0rr50_803_c1
361 nmdc:mga08x19_64773_c1
362 nmdc:mga0a205_4611_c1
363 Ga0495655_0028535
364 Ga0501084_0107084
365 2644505180
366 2644527503
367 2644667428
368 2812362233
369 2816506039
370 2835189804
371 2884994487
372 2887447565

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00155

Aminotran_1_2

Aminotransferase class I and II

44

407

0.91

PF00266

Aminotran_5

Aminotransferase class-V

91

231

0.89

PF01041

DegT_DnrJ_EryC1

DegT/DnrJ/EryC1/StrS aminotransferase family

105

225

0.84

PF01053

Cys_Met_Meta_PP

Cys/Met metabolism PLP-dependent enzyme

104

229

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
2o0r-assembly1.cif.gz_B the three-dimensional structure of n-succinyldiaminopimelate aminotransferase from mycobacterium tuberculosis 0.9808 6 385
2o0r-assembly1.cif.gz_B the three-dimensional structure of n-succinyldiaminopimelate aminotransferase from mycobacterium tuberculosis 0.9682 6 385
1w7l-assembly1.cif.gz_A crystal structure of human kynurenine aminotransferase i 0.9591 6 384
1u08-assembly1.cif.gz_A crystal structure and reactivity of ybdl from escherichia coli identify a methionine aminotransferase function. 0.9589 6 384
1yiz-assembly1.cif.gz_A aedes aegypti kynurenine aminotrasferase 0.9583 6 384
ID Description Score Start End Superfamily
af_A0A1D6I5Q5_168_402_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9804 45 278 3.40.640.10
af_P9WPZ5_1_390_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.975 6 383 3.40.50.720
af_Q7XDA3_47_275_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9748 49 278 3.40.640.10
2o0rA02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.973 43 281 3.40.640.10
af_I1KA75_339_435_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9712 293 383 3.90.1150.10
ID Description Score Start End GO Terms
AF-A0A6J7GZC0-F1-model_v4 Unannotated protein 0.9853 69 384 GO:0005737
GO:0009058
GO:0016212
GO:0030170
AF-A0A1D6I5Q5-F1-model_v4 Aspartate aminotransferase 0.9842 6 383 GO:0005737
GO:0009058
GO:0009507
GO:0016212
GO:0030170
AF-A0A354XP92-F1-model_v4 deleted 0.984 11 203
AF-A0A538AAI3-F1-model_v4 Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.9824 15 387 GO:0003677
GO:0005737
GO:0008409
GO:0009058
GO:0016212
GO:0030170
GO:0140640
AF-W1PKG7-F1-model_v4 Aminotransferase class I/classII large domain-containing protein 0.9806 1 384 GO:0005737
GO:0009058
GO:0009507
GO:0016212
GO:0030170

Map