F286666

General Info

Members Datasets Scaffolds Average Seq Length
186 126 372 469

Family's Representative Sequence

Representative Sequence 3300049568|Ga0501031_0022239|Ga0501031_0022239_2253_3749
Length 498
Sequence MSRNVAVVLAGGVGARVGLGIPKQLIKIAGRSILEHTVAALHSHPAVDEIIIMMAPGHLDAVHSIVRSGGYTKVTRVQEGAETRNGTTLRALQAIGDDDCKVLFHDAVRPLVSARIIADCFDALDSYDAVDVAIPSADTIIEVTDQGTIKNIPPRATLRRGQTPQAFRASVLREAYAAASQDPDFVATDDCTVVLRYVPDVPIWVVEGDDRNMKVTEPIDVYIADKLFQLTNRFAPVRHSPVDYSSALSGKTVVVFGGSYGIGKDIADLARDHGADVFAFSRSSTGTHVERRQDIAAAIASVLAATDRIDMVVNTAGVLPRGPLCEASEEAVYEATEINYLAPIFIAQEFFPHLAKTNGTLLLFSSSSYTRGRSGYSLYSSAKAAVVNLTQALADEWAPYGVRVNCINPERTGTPMRTKAFGQEPPDSLLDSETVARHCLDTLVSVETGQIIDIRRDDPLASHEAASEAAVELSGHAGPTAGTGITSSFGWTHGAPTR

Samples

Sample ID Description Type Environment
1 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
2 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
12 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
16 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
17 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
18 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
19 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
20 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
21 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
22 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
23 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
25 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
26 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
27 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
28 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
29 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
30 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
31 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
32 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
33 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
34 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
35 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
50 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
51 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
52 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
53 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
54 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
55 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
56 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
57 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
58 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
59 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
60 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
61 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
62 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
63 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
64 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
65 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
66 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
67 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
68 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
69 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
70 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
71 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
72 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
73 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
74 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
75 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
76 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
77 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
78 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
79 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
80 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
81 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
82 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
83 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
84 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
85 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
86 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
89 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
90 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
91 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
92 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
93 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
94 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
95 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
96 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
97 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
98 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
99 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
100 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
101 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
102 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
103 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
104 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
105 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
106 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
107 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
108 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
109 2643221561 Nocardioides sp. Root151 Isolate Unclassified
110 2643221567 Phycicoccus sp. Root563 Isolate Unclassified
111 2643221572 Leifsonia sp. Root60 Isolate Unclassified
112 2643221576 Nocardioides sp. Root614 Isolate Unclassified
113 2643221590 Nocardioides sp. Root682 Isolate Unclassified
114 2643221615 Nocardioides sp. Root224 Isolate Unclassified
115 2643221624 Phycicoccus sp. Root101 Isolate Unclassified
116 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
117 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
118 2643221696 Nocardioides sp. Root140 Isolate Unclassified
119 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
120 2808606365 Phycicoccus sp. SLBN-51 Isolate Unclassified
121 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
122 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
123 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
124 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
125 2883821847 Microlunatus elymi KUDC0627 Isolate Rhizosphere
126 2974320154 Acidovorax wautersii SORGH_AS 335 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 90.32
Metatranscriptomes 0
Isolates 9.68

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.15
Nodule 0
Rhizoplane 11.83
Rhizosphere 76.34
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501031_0022239 3300049568 Bacteria 4131
2 JGI24735J21928_10006480 3300002067 Bacteria 3851
3 rootH2_10171635 3300003320 Bacteria 3140
4 Ga0070658_10015887 3300005327 Bacteria 6020
5 Ga0070683_100005472 3300005329 Bacteria 10610
6 Ga0070683_100022210 3300005329 Bacteria 5668
7 Ga0070690_100066583 3300005330 Bacteria 2332
8 Ga0070682_100001174 3300005337 Bacteria 14960
9 Ga0070659_100091842 3300005366 Bacteria 2433
10 Ga0070667_100120764 3300005367 Bacteria 2279
11 Ga0070714_100005078 3300005435 Bacteria 10013
12 Ga0070678_100217259 3300005456 Bacteria 1587
13 Ga0068867_100008899 3300005459 Bacteria 7085
14 Ga0070679_100005332 3300005530 Bacteria 11901
15 Ga0070684_100024914 3300005535 Bacteria 5022
16 Ga0070684_100066049 3300005535 Bacteria 3176
17 Ga0070664_100037455 3300005564 Bacteria 4079
18 Ga0068856_100160127 3300005614 Bacteria 2261
19 Ga0068864_100012888 3300005618 Bacteria 6917
20 Ga0068866_10006728 3300005718 Bacteria 4792
21 Ga0075362_10028629 3300006177 Bacteria 2394
22 Ga0097621_100024502 3300006237 Bacteria 4713
23 Ga0068865_100055294 3300006881 Bacteria 2761
24 Ga0105245_10139006 3300009098 Bacteria 2286
25 Ga0114129_10000131 3300009147 Bacteria 76741
26 Ga0105243_10089522 3300009148 Bacteria 2530
27 Ga0105242_10005301 3300009176 Bacteria 9957
28 Ga0105248_10276690 3300009177 Bacteria 1890
29 Ga0105239_10035400 3300010375 Bacteria 5483
30 Ga0105246_10011531 3300011119 Bacteria 5486
31 Ga0157369_10008166 3300013105 Bacteria 12010
32 Ga0157369_10172255 3300013105 Bacteria 2280
33 Ga0157378_10024383 3300013297 Bacteria 5322
34 Ga0163162_10129802 3300013306 Bacteria 2629
35 Ga0157372_10022311 3300013307 Bacteria 6847
36 Ga0157372_10127811 3300013307 Bacteria 2922
37 Ga0157372_10234777 3300013307 Bacteria 2127
38 Ga0157375_10112110 3300013308 Bacteria 2827
39 Ga0163163_10005498 3300014325 Bacteria 10965
40 Ga0207688_10036570 3300025901 Bacteria 2722
41 Ga0207647_10059453 3300025904 Bacteria 2338
42 Ga0207647_10108446 3300025904 Bacteria 1642
43 Ga0207657_10007723 3300025919 Bacteria 10983
44 Ga0207652_10020884 3300025921 Bacteria 5398
45 Ga0207687_10099259 3300025927 Bacteria 2139
46 Ga0207664_10019608 3300025929 Bacteria 5002
47 Ga0207661_10009242 3300025944 Bacteria 7063
48 Ga0207661_10060265 3300025944 Bacteria 3061
49 Ga0207679_10179076 3300025945 Bacteria 1752
50 Ga0207703_10027044 3300026035 Bacteria 4518
51 Ga0207702_10102491 3300026078 Bacteria 2529
52 Ga0207648_10000346 3300026089 Bacteria 50966
53 Ga0207676_10034118 3300026095 Bacteria 3851
54 Ga0207674_10005745 3300026116 Bacteria 14717
55 Ga0207683_10058434 3300026121 Bacteria 3386
56 Ga0316576_10129354 3300031727 Bacteria 1899
57 Ga0307405_10016790 3300031731 Bacteria 4000
58 Ga0307410_10016387 3300031852 Bacteria 4419
59 Ga0307407_10032760 3300031903 Bacteria 2829
60 Ga0307407_10096326 3300031903 Bacteria 1826
61 Ga0307412_10051992 3300031911 Bacteria 2711
62 Ga0307409_100015580 3300031995 Bacteria 4995
63 Ga0307409_100059596 3300031995 Bacteria 2971
64 Ga0307416_100000233 3300032002 Bacteria 29604
65 Ga0307416_100002075 3300032002 Bacteria 11296
66 Ga0307415_100000040 3300032126 Bacteria 56119
67 Ga0316584_0030150 3300036712 Bacteria 4007
68 Ga0395900_0020429 3300037418 Bacteria 6761
69 Ga0395898_0044044 3300037466 Bacteria 4396
70 Ga0395898_0119112 3300037466 Bacteria 2529
71 Ga0395898_0325524 3300037466 Bacteria 1466
72 Ga0395901_0037734 3300038443 Bacteria 4997
73 Ga0395901_0208406 3300038443 Bacteria 2047
74 Ga0439446_0004721 3300042156 Bacteria 3465
75 Ga0439434_0015261 3300042435 Bacteria 2289
76 Ga0466972_0030970 3300044658 Bacteria 2633
77 Ga0466965_0008412 3300044683 Bacteria 4775
78 Ga0466965_0009309 3300044683 Bacteria 4565
79 Ga0466965_0043720 3300044683 Bacteria 2212
80 Ga0466963_0007945 3300044694 Bacteria 6351
81 Ga0466963_0014645 3300044694 Bacteria 4840
82 Ga0466963_0042825 3300044694 Bacteria 2974
83 Ga0466963_0049146 3300044694 Bacteria 2789
84 Ga0466963_0138447 3300044694 Bacteria 1685
85 Ga0466964_0001131 3300044706 Bacteria 8985
86 Ga0466960_0020135 3300044901 Bacteria 2951
87 Ga0466960_0022168 3300044901 Bacteria 2836
88 Ga0466960_0032550 3300044901 Bacteria 2415
89 Ga0466967_0007971 3300045976 Bacteria 7707
90 Ga0466967_0030997 3300045976 Bacteria 4495
91 Ga0466967_0033153 3300045976 Bacteria 4370
92 Ga0466967_0070102 3300045976 Bacteria 3135
93 Ga0466967_0135223 3300045976 Bacteria 2292
94 Ga0495641_0068129 3300046461 Bacteria 1600
95 Ga0496101_0005907 3300048904 Bacteria 7839
96 Ga0496101_0017085 3300048904 Bacteria 4914
97 Ga0496101_0200678 3300048904 Bacteria 1542
98 Ga0496102_0011162 3300048905 Bacteria 7736
99 Ga0496105_0042571 3300048908 Bacteria 3744
100 Ga0496105_0221821 3300048908 Bacteria 1539
101 Ga0496107_0006957 3300048910 Bacteria 7794
102 Ga0496108_0117092 3300048911 Bacteria 2283
103 Ga0496108_0337189 3300048911 Bacteria 1315
104 Ga0496109_0018385 3300048912 Bacteria 6141
105 Ga0496109_0025167 3300048912 Bacteria 5301
106 Ga0496109_0114630 3300048912 Bacteria 2507
107 Ga0496110_0014794 3300048913 Bacteria 6483
108 Ga0496110_0017061 3300048913 Bacteria 6069
109 Ga0496110_0022122 3300048913 Bacteria 5394
110 Ga0496111_0021818 3300048914 Bacteria 4474
111 Ga0496113_0062228 3300048916 Bacteria 2818
112 Ga0496114_0021460 3300048917 Bacteria 5256
113 Ga0496114_0042074 3300048917 Bacteria 3786
114 Ga0496114_0096040 3300048917 Bacteria 2523
115 Ga0496114_0124560 3300048917 Bacteria 2220
116 Ga0496115_0088838 3300048918 Bacteria 2523
117 Ga0501031_0023040 3300049568 Bacteria 4061
118 Ga0501031_0032397 3300049568 Bacteria 3407
119 Ga0501033_0000887 3300049570 Bacteria 27336
120 Ga0501034_0004878 3300049571 Bacteria 14801
121 Ga0501034_0019074 3300049571 Bacteria 7024
122 Ga0501036_0007734 3300049572 Bacteria 8783
123 Ga0501036_0018624 3300049572 Bacteria 5821
124 Ga0501038_0006986 3300049574 Bacteria 10424
125 Ga0501038_0064507 3300049574 Bacteria 3123
126 Ga0501041_0082856 3300049577 Bacteria 1977
127 Ga0501043_0011258 3300049579 Bacteria 7003
128 Ga0501046_0004573 3300049580 Bacteria 12518
129 Ga0501047_0039796 3300049581 Bacteria 4547
130 Ga0501067_0000967 3300049583 Bacteria 15416
131 Ga0501067_0005222 3300049583 Bacteria 7220
132 Ga0501067_0017831 3300049583 Bacteria 3930
133 Ga0501068_0001350 3300049584 Bacteria 13019
134 Ga0501068_0012029 3300049584 Bacteria 4896
135 Ga0501069_0005932 3300049585 Bacteria 6370
136 Ga0501069_0024828 3300049585 Bacteria 3272
137 Ga0501070_0005577 3300049586 Bacteria 10737
138 Ga0501070_0020572 3300049586 Bacteria 5534
139 Ga0501070_0048174 3300049586 Bacteria 3540
140 Ga0501070_0084650 3300049586 Bacteria 2625
141 Ga0501070_0092463 3300049586 Bacteria 2503
142 Ga0501071_0005251 3300049587 Bacteria 8302
143 Ga0501071_0005891 3300049587 Bacteria 7924
144 Ga0501071_0039860 3300049587 Bacteria 3361
145 Ga0501073_0007810 3300049589 Bacteria 7944
146 Ga0501074_0001370 3300049590 Bacteria 16151
147 Ga0501074_0014313 3300049590 Bacteria 5770
148 Ga0501074_0020536 3300049590 Bacteria 4800
149 Ga0501074_0044696 3300049590 Bacteria 3205
150 Ga0501076_0120821 3300049592 Bacteria 2121
151 Ga0501077_0035912 3300049593 Bacteria 3156
152 Ga0501080_0002711 3300049742 Bacteria 15522
153 Ga0501080_0012901 3300049742 Bacteria 7669
154 Ga0501080_0034858 3300049742 Bacteria 4699
155 Ga0501080_0218144 3300049742 Bacteria 1746
156 Ga0501083_0008993 3300049744 Bacteria 7050
157 Ga0501083_0010549 3300049744 Bacteria 6502
158 Ga0501083_0134418 3300049744 Bacteria 1621
159 Ga0501035_0028536 3300049822 Bacteria 5093
160 Ga0501045_0038494 3300049824 Bacteria 3478
161 nmdc:mga03683_22356_c1 3300050489 Bacteria 2451
162 nmdc:mga00v17_37208_c1 3300050491 Bacteria 2904
163 nmdc:mga05p37_407_c1 3300050507 Bacteria 46625
164 Ga0495619_0009823 3300053085 Bacteria 6032
165 Ga0500556_0001339 3300053104 Bacteria 10890
166 Ga0501084_0004923 3300054114 Bacteria 10913
167 Ga0501084_0141442 3300054114 Bacteria 2026
168 Ga0501082_0052228 3300060353 Bacteria 3523
169 2643824763 2643221561 Bacteria 4984412
170 2643852892 2643221567 Bacteria 4163945
171 2643874623 2643221572 Bacteria 3614809
172 2643892781 2643221576 Bacteria 5214352
173 2643962230 2643221590 Bacteria 5214697
174 2644093180 2643221615 Bacteria 5487866
175 2644135394 2643221624 Bacteria 4384879
176 2644322791 2643221657 Bacteria 5490246
177 2644381679 2643221669 Bacteria 3611286
178 2644536014 2643221696 Bacteria 5431823
179 2774395789 2773857762 Bacteria 5971770
180 2808875196 2808606365 Bacteria 4301966
181 2809199112 2808606439 Bacteria 5952208
182 2812334927 2811994874 Bacteria 5367947
183 2812348095 2811994878 Bacteria 5992952
184 2855386955 2855386786 Bacteria 4752232
185 2883824746 2883821847 Bacteria 5121194
186 2974321970 2974320154 Bacteria 4571377
187 Ga0501031_0022239
188 JGI24735J21928_10006480
189 rootH2_10171635
190 Ga0070658_10015887
191 Ga0070683_100005472
192 Ga0070683_100022210
193 Ga0070690_100066583
194 Ga0070682_100001174
195 Ga0070659_100091842
196 Ga0070667_100120764
197 Ga0070714_100005078
198 Ga0070678_100217259
199 Ga0068867_100008899
200 Ga0070679_100005332
201 Ga0070684_100024914
202 Ga0070684_100066049
203 Ga0070664_100037455
204 Ga0068856_100160127
205 Ga0068864_100012888
206 Ga0068866_10006728
207 Ga0075362_10028629
208 Ga0097621_100024502
209 Ga0068865_100055294
210 Ga0105245_10139006
211 Ga0114129_10000131
212 Ga0105243_10089522
213 Ga0105242_10005301
214 Ga0105248_10276690
215 Ga0105239_10035400
216 Ga0105246_10011531
217 Ga0157369_10008166
218 Ga0157369_10172255
219 Ga0157378_10024383
220 Ga0163162_10129802
221 Ga0157372_10022311
222 Ga0157372_10127811
223 Ga0157372_10234777
224 Ga0157375_10112110
225 Ga0163163_10005498
226 Ga0207688_10036570
227 Ga0207647_10059453
228 Ga0207647_10108446
229 Ga0207657_10007723
230 Ga0207652_10020884
231 Ga0207687_10099259
232 Ga0207664_10019608
233 Ga0207661_10009242
234 Ga0207661_10060265
235 Ga0207679_10179076
236 Ga0207703_10027044
237 Ga0207702_10102491
238 Ga0207648_10000346
239 Ga0207676_10034118
240 Ga0207674_10005745
241 Ga0207683_10058434
242 Ga0316576_10129354
243 Ga0307405_10016790
244 Ga0307410_10016387
245 Ga0307407_10032760
246 Ga0307407_10096326
247 Ga0307412_10051992
248 Ga0307409_100015580
249 Ga0307409_100059596
250 Ga0307416_100000233
251 Ga0307416_100002075
252 Ga0307415_100000040
253 Ga0316584_0030150
254 Ga0395900_0020429
255 Ga0395898_0044044
256 Ga0395898_0119112
257 Ga0395898_0325524
258 Ga0395901_0037734
259 Ga0395901_0208406
260 Ga0439446_0004721
261 Ga0439434_0015261
262 Ga0466972_0030970
263 Ga0466965_0008412
264 Ga0466965_0009309
265 Ga0466965_0043720
266 Ga0466963_0007945
267 Ga0466963_0014645
268 Ga0466963_0042825
269 Ga0466963_0049146
270 Ga0466963_0138447
271 Ga0466964_0001131
272 Ga0466960_0020135
273 Ga0466960_0022168
274 Ga0466960_0032550
275 Ga0466967_0007971
276 Ga0466967_0030997
277 Ga0466967_0033153
278 Ga0466967_0070102
279 Ga0466967_0135223
280 Ga0495641_0068129
281 Ga0496101_0005907
282 Ga0496101_0017085
283 Ga0496101_0200678
284 Ga0496102_0011162
285 Ga0496105_0042571
286 Ga0496105_0221821
287 Ga0496107_0006957
288 Ga0496108_0117092
289 Ga0496108_0337189
290 Ga0496109_0018385
291 Ga0496109_0025167
292 Ga0496109_0114630
293 Ga0496110_0014794
294 Ga0496110_0017061
295 Ga0496110_0022122
296 Ga0496111_0021818
297 Ga0496113_0062228
298 Ga0496114_0021460
299 Ga0496114_0042074
300 Ga0496114_0096040
301 Ga0496114_0124560
302 Ga0496115_0088838
303 Ga0501031_0023040
304 Ga0501031_0032397
305 Ga0501033_0000887
306 Ga0501034_0004878
307 Ga0501034_0019074
308 Ga0501036_0007734
309 Ga0501036_0018624
310 Ga0501038_0006986
311 Ga0501038_0064507
312 Ga0501041_0082856
313 Ga0501043_0011258
314 Ga0501046_0004573
315 Ga0501047_0039796
316 Ga0501067_0000967
317 Ga0501067_0005222
318 Ga0501067_0017831
319 Ga0501068_0001350
320 Ga0501068_0012029
321 Ga0501069_0005932
322 Ga0501069_0024828
323 Ga0501070_0005577
324 Ga0501070_0020572
325 Ga0501070_0048174
326 Ga0501070_0084650
327 Ga0501070_0092463
328 Ga0501071_0005251
329 Ga0501071_0005891
330 Ga0501071_0039860
331 Ga0501073_0007810
332 Ga0501074_0001370
333 Ga0501074_0014313
334 Ga0501074_0020536
335 Ga0501074_0044696
336 Ga0501076_0120821
337 Ga0501077_0035912
338 Ga0501080_0002711
339 Ga0501080_0012901
340 Ga0501080_0034858
341 Ga0501080_0218144
342 Ga0501083_0008993
343 Ga0501083_0010549
344 Ga0501083_0134418
345 Ga0501035_0028536
346 Ga0501045_0038494
347 nmdc:mga03683_22356_c1
348 nmdc:mga00v17_37208_c1
349 nmdc:mga05p37_407_c1
350 Ga0495619_0009823
351 Ga0500556_0001339
352 Ga0501084_0004923
353 Ga0501084_0141442
354 Ga0501082_0052228
355 2643824763
356 2643852892
357 2643874623
358 2643892781
359 2643962230
360 2644093180
361 2644135394
362 2644322791
363 2644381679
364 2644536014
365 2774395789
366 2808875196
367 2809199112
368 2812334927
369 2812348095
370 2855386955
371 2883824746
372 2974321970

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

284

425

0.95

PF01128

IspD

2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase

4

230

0.93

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

257

448

0.83

PF12804

NTP_transf_3

MobA-like NTP transferase domain

6

190

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
6zzp-assembly1.cif.gz_B-2 crystal structure of (r)-3-hydroxybutyrate dehydrogenase from psychrobacter arcticus complexed with nad+ and 3-oxovalerate 0.9321 256 461
4gkb-assembly1.cif.gz_D crystal structure of a short chain dehydrogenase homolog (target efi-505321) from burkholderia multivorans, unliganded structure 0.9317 255 461
5itv-assembly1.cif.gz_A crystal structure of bacillus subtilis bacc dihydroanticapsin 7-dehydrogenase in complex with nadh 0.9314 255 460
4kt7-assembly1.cif.gz_B the crystal structure of 4-diphosphocytidyl-2c-methyl-d-erythritolsynthase from anaerococcus prevotii dsm 20548 0.9301 9 236
6b9u-assembly1.cif.gz_A crystal structure of 3-ketoacyl-(acyl-carrier-protein) reductase from brucella melitensis complexed with nadh 0.9292 256 460
ID Description Score Start End Superfamily
5itvA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9314 255 460 3.40.50.720
af_Q86JE3_1_263_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9304 254 461 3.40.50.720
af_Q54HW7_18_312_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9297 258 463 3.40.50.720
6b9uA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9292 256 460 3.40.50.720
4kt7B00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9288 9 236 3.90.550.10
ID Description Score Start End GO Terms
AF-A0A6G3WQJ4-F1-model_v4 SDR family oxidoreductase 0.99 247 388 GO:0016491
AF-A0A6G3WQJ4-F1-model_v4 SDR family oxidoreductase 0.9831 247 388 GO:0016491
AF-A0A351C6W8-F1-model_v4 Short-chain dehydrogenase 0.955 254 422
AF-A0A1V5PG37-F1-model_v4 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) (4-diphosphocytidyl-2C-methyl-D-erythritol synthase) (MEP cytidylyltransferase) (MCT) 0.9545 8 239 GO:0019288
GO:0050518
AF-A0A508X615-F1-model_v4 Meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase 0.9513 285 417 GO:0016616

Map