F286621

General Info

Members Datasets Scaffolds Average Seq Length
186 150 372 314

Family's Representative Sequence

Representative Sequence 3300048908|Ga0496105_0090211|Ga0496105_0090211_100_1164
Length 354
Sequence LNALPEPGAEAVIEATDEQMVEQTERNEDLGAPAHREVRTGRSPSRVAWDRLKKDKVAIFCTVVIIFFIFVALFAPLLYSLQAVDPITGAKADPYTVHTELVDFNGLPTVGVSSAHWLGVEPRLGRDLFARWTVGARPSLIIGFVAAGVSTLIGVTLGLIAGYAGGWPDRVITWITDFFLSLPILLLVIAVVPIAQKSIAAGSDLTAEQTSAIRFWVLIGLLIILGWMGLARLVRGEVKSLREREFVQAARAIGVPTRQILFREVLPNLVGPIIVSASIAVPAYITYEATLSYLGVGLVEPTASWGRTIADAQNLFATYPLWLWPSVIGLSLLVLALSLLGDSIRDAFDPSSRR

Samples

Sample ID Description Type Environment
1 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
5 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
6 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
7 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
11 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
12 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
13 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
14 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
18 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
19 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
22 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
23 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
24 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
25 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
26 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
27 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
28 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
29 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
30 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
31 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
32 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
33 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
34 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
36 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
37 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
38 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
39 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
40 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
41 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
42 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
43 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
44 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
45 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
46 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
47 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
48 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
53 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
54 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
56 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
57 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
58 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
59 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
60 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
61 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
62 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
63 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
64 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
65 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
66 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
67 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
68 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
69 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
70 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
71 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
72 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
73 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
74 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
75 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
76 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
77 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
78 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
79 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
80 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
81 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
82 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
83 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
84 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
85 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
86 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
87 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
88 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
89 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
90 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
91 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
92 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
93 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
94 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
95 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
96 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
97 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
98 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
100 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
101 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
103 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
104 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
105 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
106 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
108 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
111 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
112 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
113 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
114 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
115 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
116 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
117 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
118 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
120 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
121 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
122 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
123 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
124 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
125 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
126 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
127 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
128 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
129 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
130 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
131 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
132 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
133 2643221711 Terrabacter sp. Root85 Isolate Unclassified
134 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
135 2811994882 Terrabacter sp. SLBN-196 Isolate Unclassified
136 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
137 2818991318 Humibacillus xanthopallidus SLBN-155 Isolate Unclassified
138 2818991458 Terrabacter sp. 3211 Isolate Rhizosphere
139 2818991462 Terrabacter sp. 3264 Isolate Rhizosphere
140 2818991469 Terrabacter lapilli 3265 Isolate Rhizosphere
141 2862574272 Streptomyces sp. AcE210 Isolate Nodule
142 2867475112 Streptomyces sp. TM32 Isolate Unclassified
143 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
144 2891554331 Microbispora sp. CL1-1 Isolate Unclassified
145 2891562705 Microbispora tritici MT50 Isolate Unclassified
146 3006425503 Streptomyces zingiberis PLAI1-29 Isolate Unclassified
147 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
148 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere
149 8056447290 Streptomyces huiliensis SCA2-4 Isolate Rhizosphere
150 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 88.71
Metatranscriptomes 1.61
Isolates 9.68

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 19.35
Nodule 0.54
Rhizoplane 10.22
Rhizosphere 63.98
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496105_0090211 3300048908 Bacteria 2532
2 JGI24740J21852_10017751 3300001979 Bacteria 2537
3 JGI25406J46586_10017799 3300003203 Bacteria 2931
4 Ga0058862_10130937 3300004803 Bacteria 1171
5 Ga0070668_100123254 3300005347 Bacteria 2074
6 Ga0070675_100161337 3300005354 Bacteria 1928
7 Ga0070674_100104839 3300005356 Bacteria 2067
8 Ga0070714_100142237 3300005435 Bacteria 2155
9 Ga0070713_100129827 3300005436 Bacteria 2221
10 Ga0070708_100360193 3300005445 Bacteria 1371
11 Ga0070663_100173725 3300005455 Bacteria 1667
12 Ga0070678_100052516 3300005456 Bacteria 2960
13 Ga0070706_100252972 3300005467 Bacteria 1645
14 Ga0070707_100166124 3300005468 Bacteria 2151
15 Ga0070698_100104608 3300005471 Bacteria 2800
16 Ga0070679_100024351 3300005530 Bacteria 5931
17 Ga0070672_100125929 3300005543 Bacteria 2101
18 Ga0070665_100000863 3300005548 Bacteria 39318
19 Ga0070665_100387036 3300005548 Bacteria 1406
20 Ga0068854_100124173 3300005578 Bacteria 1964
21 Ga0068856_100261975 3300005614 Bacteria 1744
22 Ga0068861_100147319 3300005719 Bacteria 1928
23 Ga0068863_100178877 3300005841 Bacteria 2036
24 Ga0081539_10000495 3300005985 Bacteria 82397
25 Ga0075365_10002441 3300006038 Bacteria 9120
26 Ga0075365_10019432 3300006038 Bacteria 4194
27 Ga0075365_10074906 3300006038 Bacteria 2283
28 Ga0075365_10079772 3300006038 Bacteria 2215
29 Ga0075368_10000862 3300006042 Bacteria 9373
30 Ga0075368_10000891 3300006042 Bacteria 9277
31 Ga0075363_100001081 3300006048 Bacteria 9857
32 Ga0075363_100001395 3300006048 Bacteria 9123
33 Ga0075363_100005283 3300006048 Bacteria 5732
34 Ga0075363_100076659 3300006048 Bacteria 1823
35 Ga0075364_10003201 3300006051 Bacteria 9279
36 Ga0075364_10034290 3300006051 Bacteria 3273
37 Ga0075364_10102032 3300006051 Bacteria 1910
38 Ga0070716_100146748 3300006173 Bacteria 1512
39 Ga0075362_10005368 3300006177 Bacteria 4683
40 Ga0075367_10001669 3300006178 Bacteria 9683
41 Ga0075367_10004208 3300006178 Bacteria 6985
42 Ga0075367_10010262 3300006178 Bacteria 4915
43 Ga0075367_10132729 3300006178 Bacteria 1540
44 Ga0097621_100191985 3300006237 Bacteria 1769
45 Ga0075370_10007664 3300006353 Bacteria 5510
46 Ga0075370_10015273 3300006353 Bacteria 4107
47 Ga0075433_10102873 3300006852 Bacteria 2530
48 Ga0111539_10056724 3300009094 Bacteria 4654
49 Ga0105243_10059228 3300009148 Bacteria 3055
50 Ga0105246_10183139 3300011119 Bacteria 1614
51 Ga0157369_10161911 3300013105 Bacteria 2362
52 Ga0163162_10294962 3300013306 Bacteria 1753
53 Ga0157372_10368059 3300013307 Bacteria 1675
54 Ga0157375_10088215 3300013308 Bacteria 3156
55 Ga0163163_10086771 3300014325 Bacteria 3139
56 Ga0157380_10385261 3300014326 Bacteria 1325
57 Ga0182008_10079596 3300014497 Bacteria 1612
58 Ga0163161_10007167 3300017792 Bacteria 7709
59 Ga0197907_10968415 3300020069 Bacteria 4917
60 Ga0206350_10219736 3300020080 Bacteria 1700
61 Ga0207426_1002587 3300025302 Bacteria 11246
62 Ga0207646_10010092 3300025922 Bacteria 9258
63 Ga0207646_10387273 3300025922 Bacteria 1263
64 Ga0207668_10116466 3300025972 Bacteria 2015
65 Ga0207640_10129174 3300025981 Bacteria 1824
66 Ga0207674_10016350 3300026116 Bacteria 8124
67 Ga0209813_10000524 3300027866 Bacteria 9065
68 Ga0207428_10167060 3300027907 Bacteria 1668
69 Ga0268266_10053550 3300028379 Bacteria 3467
70 Ga0268266_10092477 3300028379 Bacteria 2654
71 Ga0307405_10004444 3300031731 Bacteria 6629
72 Ga0307405_10145975 3300031731 Bacteria 1657
73 Ga0307410_10087470 3300031852 Bacteria 2204
74 Ga0307409_100197385 3300031995 Bacteria 1797
75 Ga0307416_100274101 3300032002 Bacteria 1659
76 Ga0307415_100030907 3300032126 Bacteria 3444
77 Ga0373938_0001975 3300034957 Bacteria 3286
78 Ga0373932_0016264 3300035112 Bacteria 1897
79 Ga0395900_0021211 3300037418 Bacteria 6642
80 Ga0395900_0164320 3300037418 Bacteria 2263
81 Ga0395900_0275555 3300037418 Bacteria 1676
82 Ga0395905_0011889 3300037471 Bacteria 8401
83 Ga0395901_0086660 3300038443 Bacteria 3274
84 Ga0451797_0550310 3300041453 Bacteria 3099
85 Ga0451837_0274152 3300041494 Bacteria 2171
86 Ga0451843_0593906 3300041509 Bacteria 2151
87 Ga0495603_0182925 3300046455 Bacteria 1212
88 Ga0495629_0188505 3300046459 Bacteria 1428
89 Ga0495638_0083021 3300046460 Bacteria 1942
90 Ga0495594_0053979 3300046499 Bacteria 2214
91 Ga0495607_0022640 3300046501 Bacteria 3942
92 Ga0495618_0059662 3300046514 Bacteria 2418
93 Ga0495628_0009044 3300046516 Bacteria 8519
94 Ga0495587_0112624 3300046536 Bacteria 1562
95 Ga0495634_0033249 3300046642 Bacteria 3544
96 Ga0495611_0026398 3300046648 Bacteria 2534
97 Ga0495625_0077401 3300046660 Bacteria 2324
98 Ga0495646_0050050 3300046680 Bacteria 2534
99 Ga0495670_0009228 3300046691 Bacteria 4852
100 Ga0495589_0004520 3300046794 Bacteria 7392
101 Ga0495600_0132711 3300046809 Bacteria 1619
102 Ga0495581_0107737 3300047315 Bacteria 1620
103 Ga0495636_0024760 3300047318 Bacteria 2435
104 Ga0495683_0129904 3300047323 Bacteria 1189
105 Ga0495685_006285 3300047447 Bacteria 3882
106 Ga0496100_0090219 3300048903 Bacteria 2090
107 Ga0496100_0098697 3300048903 Bacteria 2008
108 Ga0496101_0003509 3300048904 Bacteria 9782
109 Ga0496101_0136343 3300048904 Bacteria 1868
110 Ga0496102_0009688 3300048905 Bacteria 8285
111 Ga0496103_0075985 3300048906 Bacteria 2107
112 Ga0496105_0005830 3300048908 Bacteria 9394
113 Ga0496107_0061885 3300048910 Bacteria 2711
114 Ga0496108_0000036 3300048911 Bacteria 152347
115 Ga0496108_0166051 3300048911 Bacteria 1909
116 Ga0496110_0182195 3300048913 Bacteria 1907
117 Ga0496111_0123621 3300048914 Bacteria 1912
118 Ga0496112_0184373 3300048915 Bacteria 2051
119 Ga0496113_0045263 3300048916 Bacteria 3263
120 Ga0496113_0188571 3300048916 Bacteria 1636
121 Ga0496114_0006572 3300048917 Bacteria 9169
122 Ga0496114_0209138 3300048917 Bacteria 1711
123 Ga0501031_0004625 3300049568 Bacteria 8927
124 Ga0501031_0032369 3300049568 Bacteria 3409
125 Ga0501032_0002951 3300049569 Bacteria 13216
126 Ga0501033_0002823 3300049570 Bacteria 14541
127 Ga0501034_0065745 3300049571 Bacteria 3639
128 Ga0501036_0002023 3300049572 Bacteria 15776
129 Ga0501036_0317756 3300049572 Bacteria 1301
130 Ga0501037_0011544 3300049573 Bacteria 6502
131 Ga0501038_0006941 3300049574 Bacteria 10452
132 Ga0501039_0008450 3300049575 Bacteria 7846
133 Ga0501040_0049567 3300049576 Bacteria 2871
134 Ga0501042_0110948 3300049578 Bacteria 1975
135 Ga0501043_0015123 3300049579 Bacteria 6038
136 Ga0501048_0008896 3300049582 Bacteria 7559
137 Ga0501048_0140940 3300049582 Bacteria 1705
138 Ga0501048_0167345 3300049582 Bacteria 1557
139 Ga0501068_0035206 3300049584 Bacteria 2988
140 Ga0501069_0012374 3300049585 Bacteria 4535
141 Ga0501070_0017376 3300049586 Bacteria 6038
142 Ga0501073_0125604 3300049589 Bacteria 1778
143 Ga0501074_0000110 3300049590 Bacteria 40603
144 Ga0501076_0130056 3300049592 Bacteria 2042
145 Ga0501080_0004913 3300049742 Bacteria 11914
146 Ga0501083_0131737 3300049744 Bacteria 1639
147 Ga0501044_0078868 3300049823 Bacteria 3337
148 Ga0501044_0121699 3300049823 Bacteria 2610
149 Ga0501045_0240300 3300049824 Bacteria 1348
150 nmdc:mga03n38_4081_c1 3300050490 Bacteria 4787
151 nmdc:mga03n38_5143_c1 3300050490 Bacteria 4422
152 nmdc:mga00v17_20345_c1 3300050491 Bacteria 3801
153 nmdc:mga0yw44_17538_c1 3300050492 Bacteria 3898
154 nmdc:mga0yw44_41825_c1 3300050492 Bacteria 2730
155 nmdc:mga0yw44_7679_c1 3300050492 Bacteria 4713
156 nmdc:mga0yw44_88615_c1 3300050492 Bacteria 1951
157 nmdc:mga06z11_110222_c1 3300050494 Bacteria 1523
158 nmdc:mga06z11_39555_c1 3300050494 Bacteria 2348
159 nmdc:mga07m45_110304_c1 3300050496 Bacteria 1584
160 nmdc:mga07m45_7164_c1 3300050496 Bacteria 5683
161 nmdc:mga08y16_94975_c1 3300050511 Bacteria 3106
162 nmdc:mga0a205_130603_c1 3300050515 Bacteria 2412
163 Ga0495601_0001779 3300053077 Bacteria 11947
164 Ga0500644_0000129 3300053088 Bacteria 46233
165 Ga0500641_0071406 3300053096 Bacteria 1462
166 Ga0500616_0000107 3300053153 Bacteria 153426
167 Ga0501084_0001105 3300054114 Bacteria 21002
168 Ga0530510_0242860 3300061734 Bacteria 1341
169 2644610994 2643221711 Bacteria 4865335
170 2772646034 2772190715 Bacteria 6959372
171 2812375181 2811994882 Bacteria 4688362
172 2816425008 2816332119 Bacteria 8120218
173 2819427931 2818991318 Bacteria 5266538
174 2819666805 2818991458 Bacteria 4794049
175 2819691931 2818991462 Bacteria 4320267
176 2819729287 2818991469 Bacteria 4644110
177 2862577791 2862574272 Bacteria 10567477
178 2867478333 2867475112 Bacteria 6909112
179 2880501766 2880495981 Bacteria 7340502
180 2891554574 2891554331 Bacteria 8812224
181 2891564650 2891562705 Bacteria 8039471
182 3006430119 3006425503 Bacteria 6491253
183 8025481578 8025478263 Bacteria 8209203
184 8054166082 8054160619 Bacteria 7783213
185 8056451633 8056447290 Bacteria 7680491
186 8056672094 8056667051 Bacteria 6953971
187 Ga0496105_0090211
188 JGI24740J21852_10017751
189 JGI25406J46586_10017799
190 Ga0058862_10130937
191 Ga0070668_100123254
192 Ga0070675_100161337
193 Ga0070674_100104839
194 Ga0070714_100142237
195 Ga0070713_100129827
196 Ga0070708_100360193
197 Ga0070663_100173725
198 Ga0070678_100052516
199 Ga0070706_100252972
200 Ga0070707_100166124
201 Ga0070698_100104608
202 Ga0070679_100024351
203 Ga0070672_100125929
204 Ga0070665_100000863
205 Ga0070665_100387036
206 Ga0068854_100124173
207 Ga0068856_100261975
208 Ga0068861_100147319
209 Ga0068863_100178877
210 Ga0081539_10000495
211 Ga0075365_10002441
212 Ga0075365_10019432
213 Ga0075365_10074906
214 Ga0075365_10079772
215 Ga0075368_10000862
216 Ga0075368_10000891
217 Ga0075363_100001081
218 Ga0075363_100001395
219 Ga0075363_100005283
220 Ga0075363_100076659
221 Ga0075364_10003201
222 Ga0075364_10034290
223 Ga0075364_10102032
224 Ga0070716_100146748
225 Ga0075362_10005368
226 Ga0075367_10001669
227 Ga0075367_10004208
228 Ga0075367_10010262
229 Ga0075367_10132729
230 Ga0097621_100191985
231 Ga0075370_10007664
232 Ga0075370_10015273
233 Ga0075433_10102873
234 Ga0111539_10056724
235 Ga0105243_10059228
236 Ga0105246_10183139
237 Ga0157369_10161911
238 Ga0163162_10294962
239 Ga0157372_10368059
240 Ga0157375_10088215
241 Ga0163163_10086771
242 Ga0157380_10385261
243 Ga0182008_10079596
244 Ga0163161_10007167
245 Ga0197907_10968415
246 Ga0206350_10219736
247 Ga0207426_1002587
248 Ga0207646_10010092
249 Ga0207646_10387273
250 Ga0207668_10116466
251 Ga0207640_10129174
252 Ga0207674_10016350
253 Ga0209813_10000524
254 Ga0207428_10167060
255 Ga0268266_10053550
256 Ga0268266_10092477
257 Ga0307405_10004444
258 Ga0307405_10145975
259 Ga0307410_10087470
260 Ga0307409_100197385
261 Ga0307416_100274101
262 Ga0307415_100030907
263 Ga0373938_0001975
264 Ga0373932_0016264
265 Ga0395900_0021211
266 Ga0395900_0164320
267 Ga0395900_0275555
268 Ga0395905_0011889
269 Ga0395901_0086660
270 Ga0451797_0550310
271 Ga0451837_0274152
272 Ga0451843_0593906
273 Ga0495603_0182925
274 Ga0495629_0188505
275 Ga0495638_0083021
276 Ga0495594_0053979
277 Ga0495607_0022640
278 Ga0495618_0059662
279 Ga0495628_0009044
280 Ga0495587_0112624
281 Ga0495634_0033249
282 Ga0495611_0026398
283 Ga0495625_0077401
284 Ga0495646_0050050
285 Ga0495670_0009228
286 Ga0495589_0004520
287 Ga0495600_0132711
288 Ga0495581_0107737
289 Ga0495636_0024760
290 Ga0495683_0129904
291 Ga0495685_006285
292 Ga0496100_0090219
293 Ga0496100_0098697
294 Ga0496101_0003509
295 Ga0496101_0136343
296 Ga0496102_0009688
297 Ga0496103_0075985
298 Ga0496105_0005830
299 Ga0496107_0061885
300 Ga0496108_0000036
301 Ga0496108_0166051
302 Ga0496110_0182195
303 Ga0496111_0123621
304 Ga0496112_0184373
305 Ga0496113_0045263
306 Ga0496113_0188571
307 Ga0496114_0006572
308 Ga0496114_0209138
309 Ga0501031_0004625
310 Ga0501031_0032369
311 Ga0501032_0002951
312 Ga0501033_0002823
313 Ga0501034_0065745
314 Ga0501036_0002023
315 Ga0501036_0317756
316 Ga0501037_0011544
317 Ga0501038_0006941
318 Ga0501039_0008450
319 Ga0501040_0049567
320 Ga0501042_0110948
321 Ga0501043_0015123
322 Ga0501048_0008896
323 Ga0501048_0140940
324 Ga0501048_0167345
325 Ga0501068_0035206
326 Ga0501069_0012374
327 Ga0501070_0017376
328 Ga0501073_0125604
329 Ga0501074_0000110
330 Ga0501076_0130056
331 Ga0501080_0004913
332 Ga0501083_0131737
333 Ga0501044_0078868
334 Ga0501044_0121699
335 Ga0501045_0240300
336 nmdc:mga03n38_4081_c1
337 nmdc:mga03n38_5143_c1
338 nmdc:mga00v17_20345_c1
339 nmdc:mga0yw44_17538_c1
340 nmdc:mga0yw44_41825_c1
341 nmdc:mga0yw44_7679_c1
342 nmdc:mga0yw44_88615_c1
343 nmdc:mga06z11_110222_c1
344 nmdc:mga06z11_39555_c1
345 nmdc:mga07m45_110304_c1
346 nmdc:mga07m45_7164_c1
347 nmdc:mga08y16_94975_c1
348 nmdc:mga0a205_130603_c1
349 Ga0495601_0001779
350 Ga0500644_0000129
351 Ga0500641_0071406
352 Ga0500616_0000107
353 Ga0501084_0001105
354 Ga0530510_0242860
355 2644610994
356 2772646034
357 2812375181
358 2816425008
359 2819427931
360 2819666805
361 2819691931
362 2819729287
363 2862577791
364 2867478333
365 2880501766
366 2891554574
367 2891564650
368 3006430119
369 8025481578
370 8054166082
371 8056451633
372 8056672094

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00528

BPD_transp_1

Binding-protein-dependent transport system inner membrane component

154

354

0.98

PF12911

OppC_N

N-terminal TM domain of oligopeptide transport permease C

43

94

0.89

Map