F286154
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 186 | 137 | 177 | 365 |
Family's Representative Sequence
| Representative Sequence | 3300026075|Ga0207708_10021675|Ga0207708_100216753 |
| Length | 383 |
| Sequence | MITPFECSLRSASNGGPKMRDTVLHVSGPSPYDVVVGHALGHRLPDMLGDRVARVAVVRPVGLGAVVESLLPALRAYEVLDLTVPEGEAAKTADVAADCWRRLGEAGFTRSDAVVTLGGGATTDLGGFVAATWLRGVRVVHVPTTLLGMVDAAVGGKTGINTEAGKNLVGSFHEPAGVLCDLDTLESLPRAELVAGLGEVIKCGFIADPEILELVERHDPAALTPESPVLRELVERAIRVKIDVVTADLRETGGVDGHPGREVLNYGHTLAHAIERSEGYTLRHGEAVAIGCVFAAELAGIAGKLSGEVVERHRRVLKRVGLPTTYDRTGFDTLHEVMKVDKKARGSQLRFVVLDDIASPAILAGPSEVDLRAAFDRIRGGNA |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2643221561 | Nocardioides sp. Root151 | Isolate | Unclassified |
| 2 | 2643221696 | Nocardioides sp. Root140 | Isolate | Unclassified |
| 3 | 2739367898 | Nocardioides sp. CF479 | Isolate | Unclassified |
| 4 | 2818991472 | Kitasatospora viridis DSM 44826 | Isolate | Rhizosphere |
| 5 | 2855386786 | Nocardioides ferulae EGI 63112 | Isolate | Unclassified |
| 6 | 2857481737 | Nocardioides sp. R-74106 | Isolate | Unclassified |
| 7 | 2984576629 | Nocardioides zeae SORGH_AS913 | Isolate | Aerial Root |
| 8 | 2990256926 | Nocardioides zeae SORGH_AS885 | Isolate | Aerial Root |
| 9 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 10 | 3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Metagenome | Rhizosphere |
| 11 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005438 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG | Metagenome | Rhizosphere |
| 15 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 16 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 18 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 19 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 20 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 22 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 24 | 3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Metagenome | Rhizosphere |
| 25 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 26 | 3300005840 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 | Metagenome | Rhizosphere |
| 27 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 28 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 29 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 30 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 31 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 32 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 33 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 34 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 35 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 36 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 37 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 38 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 39 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 40 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 41 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 42 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 43 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 44 | 3300020081 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 45 | 3300020082 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 46 | 3300025899 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300025901 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300025908 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 74 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 75 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 76 | 3300035724 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 | Metagenome | Rhizosphere |
| 77 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 78 | 3300041452 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG | Metagenome | Rhizoplane |
| 79 | 3300041453 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG | Metagenome | Rhizoplane |
| 80 | 3300042006 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 | Metagenome | Rhizosphere |
| 81 | 3300042435 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 | Metagenome | Rhizosphere |
| 82 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 83 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 84 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 85 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 86 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 87 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 88 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 89 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 90 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046557 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046679 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300047315 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 101 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 102 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 103 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 104 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 105 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 106 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 107 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 108 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 109 | 3300049576 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 110 | 3300049577 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 111 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 112 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 113 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 114 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 115 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 116 | 3300049585 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 | Metagenome | Rhizosphere |
| 117 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 118 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 119 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 120 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 121 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 122 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 123 | 3300049593 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 | Metagenome | Rhizosphere |
| 124 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 125 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 126 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 127 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 128 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 129 | 3300050492 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation | Metagenome | Endosphere |
| 130 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 131 | 3300053078 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere | Metagenome | Rhizosphere |
| 132 | 3300053088 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere | Metagenome | Endosphere |
| 133 | 3300053140 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere | Metagenome | Endosphere |
| 134 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 135 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 136 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
| 137 | 8054609563 | Nocardioides astragali CGMCC 4.7327 | Isolate | Nodule |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 94.09 |
| Metatranscriptomes | 1.08 |
| Isolates | 4.84 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 1.08 |
| Bulb | 0 |
| Endosphere | 8.06 |
| Nodule | 0.54 |
| Rhizoplane | 2.69 |
| Rhizosphere | 84.95 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 2.69 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0070683_100319964 | 3300005329 | Bacteria | 1476 |
| 2 | Ga0070683_100396091 | 3300005329 | Bacteria | 1317 |
| 3 | Ga0070690_100185841 | 3300005330 | Bacteria | 1438 |
| 4 | Ga0070674_100063579 | 3300005356 | Bacteria | 2583 |
| 5 | Ga0070673_100125182 | 3300005364 | Bacteria | 2149 |
| 6 | Ga0070667_100025608 | 3300005367 | Bacteria | 4905 |
| 7 | Ga0070701_10012646 | 3300005438 | Bacteria | 3813 |
| 8 | Ga0070700_100006837 | 3300005441 | Bacteria | 6119 |
| 9 | Ga0070700_100044455 | 3300005441 | Bacteria | 2736 |
| 10 | Ga0070663_100311671 | 3300005455 | Bacteria | 1263 |
| 11 | Ga0068867_100046921 | 3300005459 | Bacteria | 3174 |
| 12 | Ga0070684_100006116 | 3300005535 | Bacteria | 9274 |
| 13 | Ga0068853_100164170 | 3300005539 | Bacteria | 2006 |
| 14 | Ga0070672_100221625 | 3300005543 | Bacteria | 1587 |
| 15 | Ga0068855_100003272 | 3300005563 | Bacteria | 19828 |
| 16 | Ga0070664_100088867 | 3300005564 | Bacteria | 2672 |
| 17 | Ga0068856_100173446 | 3300005614 | Bacteria | 2169 |
| 18 | Ga0070702_100003702 | 3300005615 | Bacteria | 6889 |
| 19 | Ga0068852_100025393 | 3300005616 | Bacteria | 4801 |
| 20 | Ga0068852_100426020 | 3300005616 | Bacteria | 1310 |
| 21 | Ga0068870_10019913 | 3300005840 | Bacteria | 3260 |
| 22 | Ga0075365_10002682 | 3300006038 | Bacteria | 8853 |
| 23 | Ga0075365_10003255 | 3300006038 | Bacteria | 8323 |
| 24 | Ga0075365_10015128 | 3300006038 | Bacteria | 4660 |
| 25 | Ga0075365_10078443 | 3300006038 | Bacteria | 2233 |
| 26 | Ga0075363_100018043 | 3300006048 | Bacteria | 3510 |
| 27 | Ga0075363_100026193 | 3300006048 | Bacteria | 2981 |
| 28 | Ga0075363_100077642 | 3300006048 | Bacteria | 1812 |
| 29 | Ga0075367_10096843 | 3300006178 | Bacteria | 1799 |
| 30 | Ga0075428_100527728 | 3300006844 | Bacteria | 1262 |
| 31 | Ga0105240_10005833 | 3300009093 | Bacteria | 18256 |
| 32 | Ga0105240_10369987 | 3300009093 | Bacteria | 1621 |
| 33 | Ga0111539_10530748 | 3300009094 | Bacteria | 1371 |
| 34 | Ga0105245_10229736 | 3300009098 | Bacteria | 1794 |
| 35 | Ga0105243_10014675 | 3300009148 | Bacteria | 5929 |
| 36 | Ga0105243_10078758 | 3300009148 | Bacteria | 2684 |
| 37 | Ga0105243_10123875 | 3300009148 | Bacteria | 2184 |
| 38 | Ga0105241_10002402 | 3300009174 | Bacteria | 14064 |
| 39 | Ga0105238_10005065 | 3300009551 | Bacteria | 13031 |
| 40 | Ga0105249_10240858 | 3300009553 | Bacteria | 1788 |
| 41 | Ga0105239_10374059 | 3300010375 | Bacteria | 1610 |
| 42 | Ga0105246_10232294 | 3300011119 | Bacteria | 1453 |
| 43 | Ga0157374_10032596 | 3300013296 | Bacteria | 4746 |
| 44 | Ga0157375_10070849 | 3300013308 | Bacteria | 3498 |
| 45 | Ga0163163_10089406 | 3300014325 | Bacteria | 3092 |
| 46 | Ga0157380_10009818 | 3300014326 | Bacteria | 6871 |
| 47 | Ga0157380_10409231 | 3300014326 | Bacteria | 1290 |
| 48 | Ga0206354_10995640 | 3300020081 | Bacteria | 1363 |
| 49 | Ga0206353_11090623 | 3300020082 | Bacteria | 3353 |
| 50 | Ga0207642_10012110 | 3300025899 | Bacteria | 3102 |
| 51 | Ga0207688_10031471 | 3300025901 | Bacteria | 2929 |
| 52 | Ga0207647_10002749 | 3300025904 | Bacteria | 13274 |
| 53 | Ga0207643_10049748 | 3300025908 | Bacteria | 2375 |
| 54 | Ga0207654_10020945 | 3300025911 | Bacteria | 3472 |
| 55 | Ga0207695_10002892 | 3300025913 | Bacteria | 24881 |
| 56 | Ga0207671_10000492 | 3300025914 | Bacteria | 53745 |
| 57 | Ga0207694_10002567 | 3300025924 | Bacteria | 14741 |
| 58 | Ga0207706_10036060 | 3300025933 | Bacteria | 4394 |
| 59 | Ga0207709_10140373 | 3300025935 | Bacteria | 1660 |
| 60 | Ga0207709_10145851 | 3300025935 | Bacteria | 1633 |
| 61 | Ga0207669_10076233 | 3300025937 | Bacteria | 2128 |
| 62 | Ga0207691_10005319 | 3300025940 | Bacteria | 12429 |
| 63 | Ga0207691_10050313 | 3300025940 | Bacteria | 3815 |
| 64 | Ga0207711_10061005 | 3300025941 | Bacteria | 3251 |
| 65 | Ga0207661_10024446 | 3300025944 | Bacteria | 4580 |
| 66 | Ga0207661_10065455 | 3300025944 | Bacteria | 2951 |
| 67 | Ga0207679_10100091 | 3300025945 | Bacteria | 2265 |
| 68 | Ga0207667_10007907 | 3300025949 | Bacteria | 12697 |
| 69 | Ga0207640_10004268 | 3300025981 | Bacteria | 7738 |
| 70 | Ga0207658_10050947 | 3300025986 | Bacteria | 3049 |
| 71 | Ga0207678_10088459 | 3300026067 | Bacteria | 2647 |
| 72 | Ga0207678_10121716 | 3300026067 | Bacteria | 2227 |
| 73 | Ga0207708_10001503 | 3300026075 | Bacteria | 17374 |
| 74 | Ga0207708_10021675 | 3300026075 | Bacteria | 4846 |
| 75 | Ga0207648_10003443 | 3300026089 | Bacteria | 16597 |
| 76 | Ga0207676_10075090 | 3300026095 | Bacteria | 2726 |
| 77 | Ga0207675_100041053 | 3300026118 | Bacteria | 4321 |
| 78 | Ga0207675_100185323 | 3300026118 | Bacteria | 1994 |
| 79 | Ga0207683_10060869 | 3300026121 | Bacteria | 3320 |
| 80 | Ga0207698_10006857 | 3300026142 | Bacteria | 7125 |
| 81 | Ga0207698_10046864 | 3300026142 | Bacteria | 3269 |
| 82 | Ga0268266_10031722 | 3300028379 | Bacteria | 4489 |
| 83 | Ga0268264_10001770 | 3300028381 | Bacteria | 19745 |
| 84 | Ga0316576_10109585 | 3300031727 | Bacteria | 2069 |
| 85 | Ga0307416_100003769 | 3300032002 | Bacteria | 8994 |
| 86 | Ga0316574_0010412 | 3300035398 | Bacteria | 5255 |
| 87 | Ga0373933_0057625 | 3300035724 | Bacteria | 2335 |
| 88 | Ga0395901_0069525 | 3300038443 | Bacteria | 3667 |
| 89 | Ga0451793_0516224 | 3300041452 | Bacteria | 3720 |
| 90 | Ga0451797_1013490 | 3300041453 | Bacteria | 1781 |
| 91 | Ga0439432_042930 | 3300042006 | Bacteria | 1429 |
| 92 | Ga0439434_0003966 | 3300042435 | Bacteria | 4319 |
| 93 | Ga0466969_0048747 | 3300044656 | Bacteria | 2092 |
| 94 | Ga0466972_0113584 | 3300044658 | Bacteria | 1279 |
| 95 | Ga0466965_0135123 | 3300044683 | Bacteria | 1281 |
| 96 | Ga0466966_0079752 | 3300044684 | Bacteria | 2040 |
| 97 | Ga0466961_0030438 | 3300044693 | Bacteria | 3469 |
| 98 | Ga0466961_0058810 | 3300044693 | Bacteria | 2445 |
| 99 | Ga0466970_0015138 | 3300044765 | Bacteria | 3967 |
| 100 | Ga0466970_0018644 | 3300044765 | Bacteria | 3595 |
| 101 | Ga0466970_0018884 | 3300044765 | Bacteria | 3570 |
| 102 | Ga0466970_0030926 | 3300044765 | Bacteria | 2825 |
| 103 | Ga0466960_0126642 | 3300044901 | Bacteria | 1343 |
| 104 | Ga0466967_0161899 | 3300045976 | Bacteria | 2101 |
| 105 | Ga0466967_0222232 | 3300045976 | Bacteria | 1795 |
| 106 | Ga0495651_0000128 | 3300046462 | Bacteria | 56236 |
| 107 | Ga0495628_0014997 | 3300046516 | Bacteria | 6476 |
| 108 | Ga0495652_0000358 | 3300046529 | Bacteria | 54461 |
| 109 | Ga0495645_0020569 | 3300046543 | Bacteria | 4765 |
| 110 | Ga0495622_0081314 | 3300046557 | Bacteria | 1490 |
| 111 | Ga0495657_0085990 | 3300046675 | Bacteria | 2027 |
| 112 | Ga0495623_0031149 | 3300046679 | Bacteria | 3430 |
| 113 | Ga0495600_0001874 | 3300046809 | Bacteria | 11799 |
| 114 | Ga0495581_0117293 | 3300047315 | Bacteria | 1548 |
| 115 | Ga0495604_0028779 | 3300047317 | Bacteria | 4421 |
| 116 | Ga0496108_0090516 | 3300048911 | Bacteria | 2601 |
| 117 | Ga0496109_0145022 | 3300048912 | Bacteria | 2221 |
| 118 | Ga0496114_0060663 | 3300048917 | Bacteria | 3162 |
| 119 | Ga0501031_0030601 | 3300049568 | Bacteria | 3512 |
| 120 | Ga0501032_0066303 | 3300049569 | Bacteria | 2413 |
| 121 | Ga0501034_0051200 | 3300049571 | Bacteria | 4164 |
| 122 | Ga0501036_0021757 | 3300049572 | Bacteria | 5391 |
| 123 | Ga0501038_0042270 | 3300049574 | Bacteria | 3969 |
| 124 | Ga0501039_0071070 | 3300049575 | Bacteria | 2704 |
| 125 | Ga0501040_0021005 | 3300049576 | Bacteria | 4354 |
| 126 | Ga0501040_0188872 | 3300049576 | Bacteria | 1462 |
| 127 | Ga0501041_0014930 | 3300049577 | Bacteria | 4612 |
| 128 | Ga0501042_0067433 | 3300049578 | Bacteria | 2558 |
| 129 | Ga0501046_0090855 | 3300049580 | Bacteria | 2349 |
| 130 | Ga0501048_0034244 | 3300049582 | Bacteria | 3666 |
| 131 | Ga0501067_0000434 | 3300049583 | Bacteria | 22861 |
| 132 | Ga0501067_0000621 | 3300049583 | Bacteria | 19113 |
| 133 | Ga0501067_0015297 | 3300049583 | Bacteria | 4246 |
| 134 | Ga0501068_0002783 | 3300049584 | Bacteria | 9300 |
| 135 | Ga0501069_0011868 | 3300049585 | Bacteria | 4620 |
| 136 | Ga0501069_0022102 | 3300049585 | Bacteria | 3457 |
| 137 | Ga0501069_0087028 | 3300049585 | Bacteria | 1764 |
| 138 | Ga0501069_0113183 | 3300049585 | Bacteria | 1547 |
| 139 | Ga0501070_0003575 | 3300049586 | Bacteria | 13446 |
| 140 | Ga0501070_0036002 | 3300049586 | Bacteria | 4133 |
| 141 | Ga0501070_0089214 | 3300049586 | Bacteria | 2552 |
| 142 | Ga0501071_0001534 | 3300049587 | Bacteria | 13476 |
| 143 | Ga0501072_0000849 | 3300049588 | Bacteria | 22417 |
| 144 | Ga0501072_0009663 | 3300049588 | Bacteria | 7338 |
| 145 | Ga0501072_0118173 | 3300049588 | Bacteria | 2112 |
| 146 | Ga0501072_0277038 | 3300049588 | Bacteria | 1334 |
| 147 | Ga0501073_0006712 | 3300049589 | Bacteria | 8567 |
| 148 | Ga0501073_0018643 | 3300049589 | Bacteria | 5015 |
| 149 | Ga0501074_0000659 | 3300049590 | Bacteria | 21547 |
| 150 | Ga0501074_0008898 | 3300049590 | Bacteria | 7279 |
| 151 | Ga0501074_0180263 | 3300049590 | Bacteria | 1507 |
| 152 | Ga0501074_0188056 | 3300049590 | Bacteria | 1472 |
| 153 | Ga0501076_0219556 | 3300049592 | Bacteria | 1554 |
| 154 | Ga0501077_0018104 | 3300049593 | Bacteria | 4453 |
| 155 | Ga0501077_0038125 | 3300049593 | Bacteria | 3059 |
| 156 | Ga0501079_0020097 | 3300049741 | Bacteria | 5102 |
| 157 | Ga0501079_0129915 | 3300049741 | Bacteria | 1960 |
| 158 | Ga0501080_0002168 | 3300049742 | Bacteria | 17044 |
| 159 | Ga0501080_0081397 | 3300049742 | Bacteria | 3008 |
| 160 | Ga0501080_0145229 | 3300049742 | Bacteria | 2193 |
| 161 | Ga0501035_0027300 | 3300049822 | Bacteria | 5218 |
| 162 | Ga0501035_0196396 | 3300049822 | Bacteria | 1733 |
| 163 | Ga0501045_0108073 | 3300049824 | Bacteria | 2062 |
| 164 | nmdc:mga00v17_114771_c1 | 3300050491 | Bacteria | 1711 |
| 165 | nmdc:mga00v17_6293_c2 | 3300050491 | Bacteria | 3802 |
| 166 | nmdc:mga0yw44_4724_c2 | 3300050492 | Bacteria | 5940 |
| 167 | nmdc:mga0yw44_61029_c1 | 3300050492 | Bacteria | 2312 |
| 168 | nmdc:mga0yw44_9080_c1 | 3300050492 | Bacteria | 4999 |
| 169 | Ga0495601_0036010 | 3300053077 | Bacteria | 3090 |
| 170 | Ga0495612_0002530 | 3300053078 | Bacteria | 7542 |
| 171 | Ga0500644_0005326 | 3300053088 | Bacteria | 3246 |
| 172 | Ga0500573_0003282 | 3300053140 | Bacteria | 8343 |
| 173 | Ga0501084_0022003 | 3300054114 | Bacteria | 5319 |
| 174 | Ga0501082_0004291 | 3300060353 | Bacteria | 12463 |
| 175 | Ga0501082_0021346 | 3300060353 | Bacteria | 5586 |
| 176 | Ga0501082_0192206 | 3300060353 | Bacteria | 1775 |
| 177 | Ga0530510_0305590 | 3300061734 | Bacteria | 1191 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300041453 | Ga0451797_1013490 | Ga0451797_1013490_11_937 | 307 |
| 2 | 3300061734 | Ga0530510_0305590 | Ga0530510_0305590_49_1059 | 309 |
| 3 | 3300020081 | Ga0206354_10995640 | Ga0206354_109956401 | 314 |
| 4 | 3300049590 | Ga0501074_0180263 | Ga0501074_0180263_518_1486 | 322 |
| 5 | 3300035724 | Ga0373933_0057625 | Ga0373933_0057625_479_1564 | 324 |
| 6 | 3300044901 | Ga0466960_0126642 | Ga0466960_0126642_328_1329 | 326 |
| 7 | 3300006038 | Ga0075365_10002682 | Ga0075365_100026828 | 334 |
| 8 | 3300044658 | Ga0466972_0113584 | Ga0466972_0113584_33_1058 | 334 |
| 9 | 3300050492 | nmdc:mga0yw44_61029_c1 | nmdc:mga0yw44_61029_c1_881_1978 | 334 |
| 10 | 3300044684 | Ga0466966_0079752 | Ga0466966_0079752_966_2027 | 337 |
| 11 | iso_pu_bacteria | 2818991472 | 2819739076 | 347 |
| 12 | 3300005543 | Ga0070672_100221625 | Ga0070672_1002216252 | 348 |
| 13 | 3300009148 | Ga0105243_10078758 | Ga0105243_100787583 | 348 |
| 14 | 3300013308 | Ga0157375_10070849 | Ga0157375_100708492 | 348 |
| 15 | 3300014325 | Ga0163163_10089406 | Ga0163163_100894062 | 348 |
| 16 | 3300014326 | Ga0157380_10409231 | Ga0157380_104092312 | 348 |
| 17 | 3300025908 | Ga0207643_10049748 | Ga0207643_100497482 | 348 |
| 18 | 3300025935 | Ga0207709_10140373 | Ga0207709_101403732 | 348 |
| 19 | 3300025940 | Ga0207691_10050313 | Ga0207691_100503134 | 348 |
| 20 | 3300026118 | Ga0207675_100185323 | Ga0207675_1001853232 | 348 |
| 21 | 3300026121 | Ga0207683_10060869 | Ga0207683_100608693 | 348 |
| 22 | 3300028381 | Ga0268264_10001770 | Ga0268264_100017707 | 348 |
| 23 | 3300046679 | Ga0495623_0031149 | Ga0495623_0031149_438_1529 | 348 |
| 24 | 3300048911 | Ga0496108_0090516 | Ga0496108_0090516_183_1268 | 348 |
| 25 | 3300005616 | Ga0068852_100426020 | Ga0068852_1004260201 | 349 |
| 26 | 3300031727 | Ga0316576_10109585 | Ga0316576_101095853 | 349 |
| 27 | 3300035398 | Ga0316574_0010412 | Ga0316574_0010412_3547_4674 | 349 |
| 28 | 3300044656 | Ga0466969_0048747 | Ga0466969_0048747_869_1987 | 350 |
| 29 | 3300044693 | Ga0466961_0030438 | Ga0466961_0030438_555_1673 | 350 |
| 30 | 3300044765 | Ga0466970_0018884 | Ga0466970_0018884_482_1600 | 350 |
| 31 | 3300005563 | Ga0068855_100003272 | Ga0068855_1000032727 | 351 |
| 32 | 3300005614 | Ga0068856_100173446 | Ga0068856_1001734463 | 351 |
| 33 | 3300005616 | Ga0068852_100025393 | Ga0068852_1000253932 | 351 |
| 34 | 3300006048 | Ga0075363_100026193 | Ga0075363_1000261933 | 351 |
| 35 | 3300006178 | Ga0075367_10096843 | Ga0075367_100968432 | 351 |
| 36 | 3300009093 | Ga0105240_10005833 | Ga0105240_1000583316 | 351 |
| 37 | 3300009093 | Ga0105240_10369987 | Ga0105240_103699872 | 351 |
| 38 | 3300009174 | Ga0105241_10002402 | Ga0105241_100024028 | 351 |
| 39 | 3300009551 | Ga0105238_10005065 | Ga0105238_100050652 | 351 |
| 40 | 3300013296 | Ga0157374_10032596 | Ga0157374_100325962 | 351 |
| 41 | 3300025904 | Ga0207647_10002749 | Ga0207647_1000274915 | 351 |
| 42 | 3300025911 | Ga0207654_10020945 | Ga0207654_100209452 | 351 |
| 43 | 3300025913 | Ga0207695_10002892 | Ga0207695_1000289217 | 351 |
| 44 | 3300025914 | Ga0207671_10000492 | Ga0207671_100004927 | 351 |
| 45 | 3300025924 | Ga0207694_10002567 | Ga0207694_1000256713 | 351 |
| 46 | 3300025949 | Ga0207667_10007907 | Ga0207667_100079079 | 351 |
| 47 | 3300025981 | Ga0207640_10004268 | Ga0207640_100042688 | 351 |
| 48 | 3300026067 | Ga0207678_10121716 | Ga0207678_101217162 | 351 |
| 49 | 3300026142 | Ga0207698_10006857 | Ga0207698_100068572 | 351 |
| 50 | 3300028379 | Ga0268266_10031722 | Ga0268266_100317223 | 351 |
| 51 | 3300046462 | Ga0495651_0000128 | Ga0495651_0000128_45550_46656 | 351 |
| 52 | 3300046516 | Ga0495628_0014997 | Ga0495628_0014997_1106_2212 | 351 |
| 53 | 3300046529 | Ga0495652_0000358 | Ga0495652_0000358_48445_49551 | 351 |
| 54 | 3300046543 | Ga0495645_0020569 | Ga0495645_0020569_1893_2999 | 351 |
| 55 | 3300046557 | Ga0495622_0081314 | Ga0495622_0081314_178_1305 | 351 |
| 56 | 3300046675 | Ga0495657_0085990 | Ga0495657_0085990_907_2013 | 351 |
| 57 | 3300046809 | Ga0495600_0001874 | Ga0495600_0001874_9829_10935 | 351 |
| 58 | 3300047315 | Ga0495581_0117293 | Ga0495581_0117293_318_1457 | 351 |
| 59 | 3300047317 | Ga0495604_0028779 | Ga0495604_0028779_148_1254 | 351 |
| 60 | 3300053077 | Ga0495601_0036010 | Ga0495601_0036010_1176_2306 | 351 |
| 61 | 3300053078 | Ga0495612_0002530 | Ga0495612_0002530_1136_2266 | 351 |
| 62 | 3300006048 | Ga0075363_100077642 | Ga0075363_1000776422 | 352 |
| 63 | 3300020082 | Ga0206353_11090623 | Ga0206353_110906232 | 352 |
| 64 | 3300049585 | Ga0501069_0113183 | Ga0501069_0113183_331_1398 | 352 |
| 65 | 3300049588 | Ga0501072_0118173 | Ga0501072_0118173_838_1905 | 352 |
| 66 | 3300050491 | nmdc:mga00v17_6293_c2 | nmdc:mga00v17_6293_c2_1977_3035 | 352 |
| 67 | 3300006038 | Ga0075365_10015128 | Ga0075365_100151284 | 353 |
| 68 | 3300041452 | Ga0451793_0516224 | Ga0451793_0516224_846_1937 | 353 |
| 69 | 3300048917 | Ga0496114_0060663 | Ga0496114_0060663_288_1385 | 353 |
| 70 | 3300050492 | nmdc:mga0yw44_9080_c1 | nmdc:mga0yw44_9080_c1_1613_2674 | 353 |
| 71 | 3300044693 | Ga0466961_0058810 | Ga0466961_0058810_959_2056 | 354 |
| 72 | 3300044765 | Ga0466970_0015138 | Ga0466970_0015138_115_1218 | 354 |
| 73 | 3300044765 | Ga0466970_0030926 | Ga0466970_0030926_77_1174 | 354 |
| 74 | 3300045976 | Ga0466967_0161899 | Ga0466967_0161899_827_1924 | 354 |
| 75 | 3300045976 | Ga0466967_0222232 | Ga0466967_0222232_81_1187 | 354 |
| 76 | 3300049583 | Ga0501067_0015297 | Ga0501067_0015297_74_1180 | 354 |
| 77 | iso_pu_bacteria | 2739367898 | 2740169487 | 354 |
| 78 | iso_pu_bacteria | 2857481737 | 2857484646 | 354 |
| 79 | iso_pu_bacteria | 8054609563 | 8054612838 | 354 |
| 80 | 3300005564 | Ga0070664_100088867 | Ga0070664_1000888673 | 355 |
| 81 | 3300006038 | Ga0075365_10078443 | Ga0075365_100784433 | 355 |
| 82 | 3300025933 | Ga0207706_10036060 | Ga0207706_100360603 | 355 |
| 83 | 3300025944 | Ga0207661_10024446 | Ga0207661_100244463 | 355 |
| 84 | 3300025945 | Ga0207679_10100091 | Ga0207679_101000913 | 355 |
| 85 | 3300050492 | nmdc:mga0yw44_4724_c2 | nmdc:mga0yw44_4724_c2_762_1829 | 355 |
| 86 | 3300053088 | Ga0500644_0005326 | Ga0500644_0005326_486_1553 | 355 |
| 87 | iso_pu_bacteria | 2855386786 | 2855386929 | 355 |
| 88 | iso_pu_bacteria | 2984576629 | 2984579947 | 355 |
| 89 | iso_pu_bacteria | 2990256926 | 2990260374 | 355 |
| 90 | 3300005441 | Ga0070700_100044455 | Ga0070700_1000444553 | 356 |
| 91 | 3300005455 | Ga0070663_100311671 | Ga0070663_1003116711 | 356 |
| 92 | 3300006038 | Ga0075365_10003255 | Ga0075365_100032558 | 356 |
| 93 | 3300006048 | Ga0075363_100018043 | Ga0075363_1000180432 | 356 |
| 94 | 3300009148 | Ga0105243_10123875 | Ga0105243_101238753 | 356 |
| 95 | 3300010375 | Ga0105239_10374059 | Ga0105239_103740591 | 356 |
| 96 | 3300026067 | Ga0207678_10088459 | Ga0207678_100884594 | 356 |
| 97 | 3300026075 | Ga0207708_10021675 | Ga0207708_100216753 | 356 |
| 98 | 3300026142 | Ga0207698_10046864 | Ga0207698_100468642 | 356 |
| 99 | 3300032002 | Ga0307416_100003769 | Ga0307416_1000037696 | 356 |
| 100 | 3300044683 | Ga0466965_0135123 | Ga0466965_0135123_68_1165 | 356 |
| 101 | 3300049568 | Ga0501031_0030601 | Ga0501031_0030601_1091_2197 | 356 |
| 102 | 3300049569 | Ga0501032_0066303 | Ga0501032_0066303_232_1338 | 356 |
| 103 | 3300049575 | Ga0501039_0071070 | Ga0501039_0071070_599_1702 | 356 |
| 104 | 3300049576 | Ga0501040_0188872 | Ga0501040_0188872_172_1272 | 356 |
| 105 | 3300049577 | Ga0501041_0014930 | Ga0501041_0014930_561_1658 | 356 |
| 106 | 3300049578 | Ga0501042_0067433 | Ga0501042_0067433_356_1462 | 356 |
| 107 | 3300049588 | Ga0501072_0009663 | Ga0501072_0009663_6155_7252 | 356 |
| 108 | 3300049822 | Ga0501035_0196396 | Ga0501035_0196396_266_1372 | 356 |
| 109 | 3300050491 | nmdc:mga00v17_114771_c1 | nmdc:mga00v17_114771_c1_52_1122 | 356 |
| 110 | iso_pu_bacteria | 2643221561 | 2643825881 | 356 |
| 111 | iso_pu_bacteria | 2643221696 | 2644531874 | 356 |
| 112 | 3300005367 | Ga0070667_100025608 | Ga0070667_1000256086 | 357 |
| 113 | 3300025986 | Ga0207658_10050947 | Ga0207658_100509472 | 357 |
| 114 | 3300038443 | Ga0395901_0069525 | Ga0395901_0069525_1379_2485 | 357 |
| 115 | 3300042006 | Ga0439432_042930 | Ga0439432_042930_44_1141 | 357 |
| 116 | 3300042435 | Ga0439434_0003966 | Ga0439434_0003966_63_1160 | 357 |
| 117 | 3300044765 | Ga0466970_0018644 | Ga0466970_0018644_734_1834 | 357 |
| 118 | 3300049571 | Ga0501034_0051200 | Ga0501034_0051200_2929_4032 | 357 |
| 119 | 3300049572 | Ga0501036_0021757 | Ga0501036_0021757_4237_5337 | 357 |
| 120 | 3300049574 | Ga0501038_0042270 | Ga0501038_0042270_2846_3946 | 357 |
| 121 | 3300049576 | Ga0501040_0021005 | Ga0501040_0021005_1584_2684 | 357 |
| 122 | 3300049580 | Ga0501046_0090855 | Ga0501046_0090855_761_1861 | 357 |
| 123 | 3300049582 | Ga0501048_0034244 | Ga0501048_0034244_2543_3643 | 357 |
| 124 | 3300049583 | Ga0501067_0000434 | Ga0501067_0000434_13571_14674 | 357 |
| 125 | 3300049583 | Ga0501067_0000621 | Ga0501067_0000621_4469_5572 | 357 |
| 126 | 3300049584 | Ga0501068_0002783 | Ga0501068_0002783_1151_2254 | 357 |
| 127 | 3300049585 | Ga0501069_0011868 | Ga0501069_0011868_1033_2136 | 357 |
| 128 | 3300049585 | Ga0501069_0022102 | Ga0501069_0022102_1589_2689 | 357 |
| 129 | 3300049585 | Ga0501069_0087028 | Ga0501069_0087028_116_1246 | 357 |
| 130 | 3300049586 | Ga0501070_0003575 | Ga0501070_0003575_12318_13421 | 357 |
| 131 | 3300049586 | Ga0501070_0036002 | Ga0501070_0036002_1215_2318 | 357 |
| 132 | 3300049586 | Ga0501070_0089214 | Ga0501070_0089214_1064_2164 | 357 |
| 133 | 3300049587 | Ga0501071_0001534 | Ga0501071_0001534_848_1948 | 357 |
| 134 | 3300049588 | Ga0501072_0000849 | Ga0501072_0000849_10507_11607 | 357 |
| 135 | 3300049588 | Ga0501072_0277038 | Ga0501072_0277038_208_1311 | 357 |
| 136 | 3300049589 | Ga0501073_0006712 | Ga0501073_0006712_2076_3179 | 357 |
| 137 | 3300049589 | Ga0501073_0018643 | Ga0501073_0018643_738_1841 | 357 |
| 138 | 3300049590 | Ga0501074_0000659 | Ga0501074_0000659_11981_13084 | 357 |
| 139 | 3300049590 | Ga0501074_0008898 | Ga0501074_0008898_4121_5224 | 357 |
| 140 | 3300049590 | Ga0501074_0188056 | Ga0501074_0188056_197_1297 | 357 |
| 141 | 3300049592 | Ga0501076_0219556 | Ga0501076_0219556_159_1271 | 357 |
| 142 | 3300049593 | Ga0501077_0018104 | Ga0501077_0018104_1161_2264 | 357 |
| 143 | 3300049593 | Ga0501077_0038125 | Ga0501077_0038125_1589_2692 | 357 |
| 144 | 3300049741 | Ga0501079_0020097 | Ga0501079_0020097_907_2010 | 357 |
| 145 | 3300049741 | Ga0501079_0129915 | Ga0501079_0129915_198_1301 | 357 |
| 146 | 3300049742 | Ga0501080_0002168 | Ga0501080_0002168_13462_14565 | 357 |
| 147 | 3300049742 | Ga0501080_0081397 | Ga0501080_0081397_582_1685 | 357 |
| 148 | 3300049742 | Ga0501080_0145229 | Ga0501080_0145229_293_1393 | 357 |
| 149 | 3300049822 | Ga0501035_0027300 | Ga0501035_0027300_2665_3765 | 357 |
| 150 | 3300049824 | Ga0501045_0108073 | Ga0501045_0108073_430_1542 | 357 |
| 151 | 3300053140 | Ga0500573_0003282 | Ga0500573_0003282_6188_7291 | 357 |
| 152 | 3300054114 | Ga0501084_0022003 | Ga0501084_0022003_269_1372 | 357 |
| 153 | 3300060353 | Ga0501082_0004291 | Ga0501082_0004291_9096_10199 | 357 |
| 154 | 3300060353 | Ga0501082_0021346 | Ga0501082_0021346_2298_3401 | 357 |
| 155 | 3300060353 | Ga0501082_0192206 | Ga0501082_0192206_439_1539 | 357 |
| 156 | 3300005329 | Ga0070683_100319964 | Ga0070683_1003199642 | 365 |
| 157 | 3300005329 | Ga0070683_100396091 | Ga0070683_1003960911 | 365 |
| 158 | 3300005330 | Ga0070690_100185841 | Ga0070690_1001858412 | 365 |
| 159 | 3300005356 | Ga0070674_100063579 | Ga0070674_1000635792 | 365 |
| 160 | 3300005364 | Ga0070673_100125182 | Ga0070673_1001251822 | 365 |
| 161 | 3300005438 | Ga0070701_10012646 | Ga0070701_100126464 | 365 |
| 162 | 3300005441 | Ga0070700_100006837 | Ga0070700_1000068374 | 365 |
| 163 | 3300005459 | Ga0068867_100046921 | Ga0068867_1000469212 | 365 |
| 164 | 3300005535 | Ga0070684_100006116 | Ga0070684_1000061163 | 365 |
| 165 | 3300005539 | Ga0068853_100164170 | Ga0068853_1001641702 | 365 |
| 166 | 3300005615 | Ga0070702_100003702 | Ga0070702_1000037029 | 365 |
| 167 | 3300005840 | Ga0068870_10019913 | Ga0068870_100199133 | 365 |
| 168 | 3300006844 | Ga0075428_100527728 | Ga0075428_1005277281 | 365 |
| 169 | 3300009094 | Ga0111539_10530748 | Ga0111539_105307482 | 365 |
| 170 | 3300009098 | Ga0105245_10229736 | Ga0105245_102297362 | 365 |
| 171 | 3300009148 | Ga0105243_10014675 | Ga0105243_100146754 | 365 |
| 172 | 3300009553 | Ga0105249_10240858 | Ga0105249_102408582 | 365 |
| 173 | 3300011119 | Ga0105246_10232294 | Ga0105246_102322942 | 365 |
| 174 | 3300014326 | Ga0157380_10009818 | Ga0157380_100098183 | 365 |
| 175 | 3300025899 | Ga0207642_10012110 | Ga0207642_100121103 | 365 |
| 176 | 3300025901 | Ga0207688_10031471 | Ga0207688_100314713 | 365 |
| 177 | 3300025935 | Ga0207709_10145851 | Ga0207709_101458512 | 365 |
| 178 | 3300025937 | Ga0207669_10076233 | Ga0207669_100762332 | 365 |
| 179 | 3300025940 | Ga0207691_10005319 | Ga0207691_100053194 | 365 |
| 180 | 3300025941 | Ga0207711_10061005 | Ga0207711_100610053 | 365 |
| 181 | 3300025944 | Ga0207661_10065455 | Ga0207661_100654553 | 365 |
| 182 | 3300026075 | Ga0207708_10001503 | Ga0207708_100015034 | 365 |
| 183 | 3300026089 | Ga0207648_10003443 | Ga0207648_1000344314 | 365 |
| 184 | 3300026095 | Ga0207676_10075090 | Ga0207676_100750903 | 365 |
| 185 | 3300026118 | Ga0207675_100041053 | Ga0207675_1000410533 | 365 |
| 186 | 3300048912 | Ga0496109_0145022 | Ga0496109_0145022_345_1442 | 365 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3qbe-assembly1.cif.gz_A | crystal structure of the 3-dehydroquinate synthase (arob) from mycobacterium tuberculosis | 0.9272 | 2 | 360 |
| 3qbd-assembly1.cif.gz_B | 3-dehydroquinate synthase (arob) from mycobacterium tuberculosis in complex with nad | 0.9175 | 2 | 360 |
| 3qbe-assembly1.cif.gz_A | crystal structure of the 3-dehydroquinate synthase (arob) from mycobacterium tuberculosis | 0.9143 | 2 | 360 |
| 3qbd-assembly1.cif.gz_A | 3-dehydroquinate synthase (arob) from mycobacterium tuberculosis in complex with nad | 0.9109 | 2 | 365 |
| 3qbd-assembly1.cif.gz_B | 3-dehydroquinate synthase (arob) from mycobacterium tuberculosis in complex with nad | 0.9071 | 2 | 360 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 3qbdB02 | Mainly Alpha;Up-down Bundle;Dehydroquinate synthase-like, alpha domain;Dehydroquinate synthase-like - alpha domain | 0.9602 | 162 | 360 | 1.20.1090.10 |
| 3qbdB02 | Mainly Alpha;Up-down Bundle;Dehydroquinate synthase-like, alpha domain;Dehydroquinate synthase-like - alpha domain | 0.9505 | 162 | 360 | 1.20.1090.10 |
| 3okfB02 | Mainly Alpha;Up-down Bundle;Dehydroquinate synthase-like, alpha domain;Dehydroquinate synthase-like - alpha domain | 0.9316 | 162 | 362 | 1.20.1090.10 |
| 3okfB02 | Mainly Alpha;Up-down Bundle;Dehydroquinate synthase-like, alpha domain;Dehydroquinate synthase-like - alpha domain | 0.9218 | 162 | 362 | 1.20.1090.10 |
| 3clhB02 | Mainly Alpha;Up-down Bundle;Dehydroquinate synthase-like, alpha domain;Dehydroquinate synthase-like - alpha domain | 0.9107 | 162 | 358 | 1.20.1090.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A6B3FKU7-F1-model_v4 | 3-dehydroquinate synthase | 0.979 | 254 | 361 |
GO:0003856
GO:0009073 |
| AF-A0A7S1KI02-F1-model_v4 | 3-dehydroquinate synthase domain-containing protein | 0.9684 | 66 | 178 |
GO:0003856
GO:0009073 GO:0016020 |
| AF-A0A2S8M8B4-F1-model_v4 | deleted | 0.9666 | 97 | 361 |
|
| AF-A0A7G1IEE2-F1-model_v4 | 3-dehydroquinate synthase domain-containing protein | 0.9631 | 109 | 360 |
GO:0003856
GO:0009073 |
| AF-A0A6L6F135-F1-model_v4 | 3-dehydroquinate synthase (EC 4.2.3.4) | 0.9597 | 56 | 361 |
GO:0003856
GO:0005737 GO:0008652 GO:0009073 GO:0009423 |
Predicted Structure (AlphaFold2)
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