F286151

General Info

Members Datasets Scaffolds Average Seq Length
186 129 372 236

Family's Representative Sequence

Representative Sequence 3300026067|Ga0207678_10120717|Ga0207678_101207172
Length 266
Sequence LNRGIKVTEIAAKAQPSAPAPTDEVGQLGRPRPDNRPAPIGGWSTARVVEVSHPTPRSVMLRLDVPDRVDHLPGQHYVIRLTADDGYVAQRSYSIASAPSDPLIELWIERLDDGEVSGFLADVVQPGDQLEVRGPIGGWFVWDGASRAVGVAGGSGAVRLVAMLRHAAVLGVPDLLTLAVSARTLPDVPYASELAAAGALIALSRTEQPSRRAGRLTAAELQPLVVKDAITYVCGSAGFAEFASSLLVELGCPSADVRVERFGPSG

Samples

Sample ID Description Type Environment
1 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
12 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
15 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
16 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
17 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
18 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
21 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
22 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
23 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
26 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
27 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
28 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
29 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
30 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
31 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
32 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
33 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
34 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
35 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
36 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
37 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
39 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
40 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
41 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
42 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
43 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
44 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
45 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
46 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
47 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
48 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
49 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
80 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
81 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
82 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
83 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
84 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
85 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
86 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
87 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
88 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
89 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
90 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
91 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
92 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
93 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
94 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
95 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
96 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
97 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
98 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
99 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
100 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
101 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
102 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
103 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
104 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
105 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
106 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
107 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
108 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
109 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
110 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
111 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
112 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
113 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
114 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
115 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
116 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
117 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
118 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
119 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
120 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
121 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
122 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
123 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
124 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
125 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
126 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
127 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
128 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
129 2622736605 Geodermatophilus ruber DSM 45317 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.46
Metatranscriptomes 0
Isolates 0.54

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.76
Nodule 0
Rhizoplane 13.44
Rhizosphere 79.03
Stem 0
Stem Tuber 0
Unclassified 0.54

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207678_10120717 3300026067 Bacteria 2237
2 JGI24738J21930_10018970 3300002075 Bacteria 1436
3 rootL2_10264828 3300003322 Bacteria 1579
4 Ga0070683_100011786 3300005329 Bacteria 7572
5 Ga0070683_100457511 3300005329 Bacteria 1218
6 Ga0070683_100977411 3300005329 Bacteria 812
7 Ga0070690_100539910 3300005330 Bacteria 878
8 Ga0070682_100343729 3300005337 Bacteria 1110
9 Ga0070682_100629658 3300005337 Bacteria 851
10 Ga0068868_100417014 3300005338 Bacteria 1162
11 Ga0070660_100294729 3300005339 Bacteria 1329
12 Ga0070687_100025576 3300005343 Bacteria 2834
13 Ga0070661_100642368 3300005344 Bacteria 861
14 Ga0070692_10009080 3300005345 Bacteria 4466
15 Ga0070674_100061277 3300005356 Bacteria 2625
16 Ga0070674_100524325 3300005356 Bacteria 990
17 Ga0070667_100210910 3300005367 Bacteria 1726
18 Ga0070714_100884222 3300005435 Bacteria 867
19 Ga0070701_10004692 3300005438 Bacteria 5570
20 Ga0070663_100033928 3300005455 Bacteria 3530
21 Ga0070663_100528301 3300005455 Bacteria 983
22 Ga0068867_100005221 3300005459 Bacteria 9169
23 Ga0070685_10067228 3300005466 Bacteria 2114
24 Ga0070685_10121032 3300005466 Bacteria 1625
25 Ga0070684_100005400 3300005535 Bacteria 9790
26 Ga0068853_100102329 3300005539 Bacteria 2534
27 Ga0070672_100139354 3300005543 Bacteria 1999
28 Ga0070686_100054808 3300005544 Bacteria 2552
29 Ga0070665_100004729 3300005548 Bacteria 14170
30 Ga0068855_100079119 3300005563 Bacteria 3813
31 Ga0068855_100117062 3300005563 Bacteria 3054
32 Ga0070664_100005545 3300005564 Bacteria 10133
33 Ga0070664_100242309 3300005564 Bacteria 1619
34 Ga0068856_100627593 3300005614 Bacteria 1095
35 Ga0068852_100005282 3300005616 Bacteria 9221
36 Ga0068852_100007180 3300005616 Bacteria 8119
37 Ga0068861_100353015 3300005719 Bacteria 1291
38 Ga0068851_10094372 3300005834 Bacteria 1580
39 Ga0068870_10008303 3300005840 Bacteria 4665
40 Ga0070717_10134050 3300006028 Bacteria 2132
41 Ga0075365_10015851 3300006038 Bacteria 4567
42 Ga0075365_10047554 3300006038 Bacteria 2820
43 Ga0075428_100189489 3300006844 Bacteria 2225
44 Ga0075430_100486660 3300006846 Bacteria 1018
45 Ga0068865_100018614 3300006881 Bacteria 4484
46 Ga0068865_100302005 3300006881 Bacteria 1282
47 Ga0105240_10127628 3300009093 Bacteria 3054
48 Ga0111539_10056953 3300009094 Bacteria 4643
49 Ga0105245_10130871 3300009098 Bacteria 2353
50 Ga0105243_10006984 3300009148 Bacteria 8694
51 Ga0105243_10404818 3300009148 Bacteria 1269
52 Ga0105242_10647664 3300009176 Bacteria 1027
53 Ga0105248_10325195 3300009177 Bacteria 1732
54 Ga0105237_10249716 3300009545 Bacteria 1776
55 Ga0105238_10063372 3300009551 Bacteria 3697
56 Ga0105238_10088708 3300009551 Bacteria 3079
57 Ga0105238_10587990 3300009551 Bacteria 1120
58 Ga0105249_10015640 3300009553 Bacteria 6718
59 Ga0105239_10395807 3300010375 Bacteria 1563
60 Ga0163163_10093934 3300014325 Bacteria 3016
61 Ga0157380_10013797 3300014326 Bacteria 5902
62 Ga0157376_10209188 3300014969 Bacteria 1800
63 Ga0207656_10109632 3300025321 Bacteria 1274
64 Ga0207688_10276562 3300025901 Bacteria 1022
65 Ga0207647_10027024 3300025904 Bacteria 3746
66 Ga0207643_10007415 3300025908 Bacteria 5883
67 Ga0207654_10384959 3300025911 Bacteria 972
68 Ga0207662_10127508 3300025918 Bacteria 1601
69 Ga0207657_10479030 3300025919 Bacteria 976
70 Ga0207652_10639890 3300025921 Bacteria 951
71 Ga0207694_10112499 3300025924 Bacteria 2166
72 Ga0207694_10120301 3300025924 Bacteria 2096
73 Ga0207687_10314752 3300025927 Bacteria 1265
74 Ga0207690_10015902 3300025932 Bacteria 4569
75 Ga0207690_10050792 3300025932 Bacteria 2770
76 Ga0207706_10085135 3300025933 Bacteria 2779
77 Ga0207709_10048574 3300025935 Bacteria 2586
78 Ga0207669_10270125 3300025937 Bacteria 1277
79 Ga0207704_10036595 3300025938 Bacteria 2825
80 Ga0207691_10007959 3300025940 Bacteria 10198
81 Ga0207661_10017618 3300025944 Bacteria 5291
82 Ga0207661_10248202 3300025944 Bacteria 1581
83 Ga0207679_10091472 3300025945 Bacteria 2355
84 Ga0207679_10306299 3300025945 Bacteria 1371
85 Ga0207679_10474718 3300025945 Bacteria 1112
86 Ga0207667_10016905 3300025949 Bacteria 8230
87 Ga0207658_10067577 3300025986 Bacteria 2693
88 Ga0207677_10048053 3300026023 Bacteria 2870
89 Ga0207639_10133635 3300026041 Bacteria 2057
90 Ga0207678_10203658 3300026067 Bacteria 1692
91 Ga0207678_10252441 3300026067 Bacteria 1511
92 Ga0207708_10006573 3300026075 Bacteria 8605
93 Ga0207702_10304885 3300026078 Bacteria 1512
94 Ga0207648_10004906 3300026089 Bacteria 13620
95 Ga0207676_10066118 3300026095 Bacteria 2882
96 Ga0207675_100004039 3300026118 Bacteria 14213
97 Ga0207683_10141486 3300026121 Bacteria 2168
98 Ga0207683_10380526 3300026121 Bacteria 1297
99 Ga0207698_10133165 3300026142 Bacteria 2128
100 Ga0268266_10004367 3300028379 Bacteria 13585
101 Ga0307415_100111741 3300032126 Bacteria 2029
102 Ga0307415_100586277 3300032126 Bacteria 990
103 Ga0373931_0288844 3300035691 Bacteria 1009
104 Ga0395900_0052647 3300037418 Bacteria 4190
105 Ga0395900_0097607 3300037418 Bacteria 3019
106 Ga0395898_0085559 3300037466 Bacteria 3039
107 Ga0395898_0383001 3300037466 Bacteria 1341
108 Ga0395905_0015314 3300037471 Bacteria 7288
109 Ga0395905_0968262 3300037471 Bacteria 754
110 Ga0395901_0010940 3300038443 Bacteria 9193
111 Ga0395901_0031806 3300038443 Bacteria 5441
112 Ga0395901_0209591 3300038443 Bacteria 2040
113 Ga0451793_0734132 3300041452 Bacteria 1935
114 Ga0451793_1044973 3300041452 Bacteria 3632
115 Ga0451800_0980136 3300041459 Bacteria 2710
116 Ga0451800_1244357 3300041459 Bacteria 899
117 Ga0451835_0296577 3300041492 Bacteria 1057
118 Ga0451839_0277874 3300041496 Bacteria 3600
119 Ga0451843_1486407 3300041509 Bacteria 3242
120 Ga0451853_0036255 3300041512 Bacteria 2200
121 Ga0466972_0062404 3300044658 Bacteria 1786
122 Ga0466972_0080924 3300044658 Bacteria 1547
123 Ga0466972_0203846 3300044658 Bacteria 926
124 Ga0466965_0061500 3300044683 Bacteria 1877
125 Ga0466966_0093903 3300044684 Bacteria 1860
126 Ga0466961_0057598 3300044693 Bacteria 2473
127 Ga0466970_0006039 3300044765 Bacteria 6039
128 Ga0466970_0017754 3300044765 Bacteria 3679
129 Ga0466970_0132404 3300044765 Bacteria 1370
130 Ga0466957_0219931 3300044842 Bacteria 1254
131 Ga0466960_0014721 3300044901 Bacteria 3357
132 Ga0466960_0037545 3300044901 Bacteria 2273
133 Ga0466960_0046262 3300044901 Bacteria 2083
134 Ga0466960_0073153 3300044901 Bacteria 1710
135 Ga0466960_0107058 3300044901 Bacteria 1447
136 Ga0466967_0021232 3300045976 Bacteria 5267
137 Ga0466967_0068979 3300045976 Bacteria 3159
138 Ga0466967_0292941 3300045976 Bacteria 1564
139 Ga0466967_0378528 3300045976 Bacteria 1374
140 Ga0466967_0417296 3300045976 Bacteria 1308
141 Ga0466967_0468493 3300045976 Bacteria 1233
142 Ga0466967_0545378 3300045976 Bacteria 1141
143 Ga0466967_0720391 3300045976 Bacteria 989
144 Ga0495653_0018195 3300046463 Bacteria 5710
145 Ga0495582_0259520 3300046473 Bacteria 997
146 Ga0495664_0115983 3300046477 Bacteria 1619
147 Ga0495658_0077098 3300046683 Bacteria 1949
148 Ga0495600_0201557 3300046809 Bacteria 1278
149 Ga0495581_0165595 3300047315 Bacteria 1293
150 Ga0495581_0177927 3300047315 Bacteria 1244
151 Ga0495676_0273275 3300047321 Bacteria 1146
152 Ga0495680_0282837 3300047322 Bacteria 1169
153 Ga0496102_0009030 3300048905 Bacteria 8555
154 Ga0496102_0018713 3300048905 Bacteria 6091
155 Ga0496103_0008535 3300048906 Bacteria 6089
156 Ga0496103_0117828 3300048906 Bacteria 1690
157 Ga0496104_0010913 3300048907 Bacteria 8126
158 Ga0496105_0042379 3300048908 Bacteria 3752
159 Ga0496107_0322222 3300048910 Bacteria 1150
160 Ga0496108_0244435 3300048911 Bacteria 1561
161 Ga0496109_0005316 3300048912 Bacteria 10762
162 Ga0496109_0371510 3300048912 Bacteria 1351
163 Ga0496110_0003873 3300048913 Bacteria 11526
164 Ga0496110_0105296 3300048913 Unclassified 2531
165 Ga0496110_0108972 3300048913 Bacteria 2487
166 Ga0496110_0263399 3300048913 Bacteria 1569
167 Ga0496111_0004818 3300048914 Bacteria 8557
168 Ga0496111_0184390 3300048914 Bacteria 1552
169 Ga0496113_0027668 3300048916 Bacteria 4068
170 Ga0496113_0848042 3300048916 Bacteria 724
171 Ga0496114_0036260 3300048917 Bacteria 4076
172 Ga0496114_0052923 3300048917 Bacteria 3383
173 Ga0496114_0350307 3300048917 Bacteria 1306
174 Ga0496118_0058415 3300048921 Bacteria 2883
175 Ga0496126_0230747 3300048929 Bacteria 1551
176 Ga0501067_0011899 3300049583 Bacteria 4822
177 Ga0501069_0242565 3300049585 Bacteria 1050
178 Ga0501070_0192209 3300049586 Bacteria 1677
179 nmdc:mga0yw44_72469_c1 3300050492 Bacteria 2141
180 nmdc:mga0yw44_9708_c1 3300050492 Bacteria 4885
181 nmdc:mga08y16_53602_c1 3300050511 Bacteria 4217
182 Ga0495619_0501925 3300053085 Bacteria 834
183 Ga0500641_0005707 3300053096 Bacteria 4409
184 Ga0500556_0002907 3300053104 Bacteria 5202
185 Ga0500573_0003926 3300053140 Bacteria 7768
186 2623500502 2622736605 Bacteria 4992138
187 Ga0207678_10120717
188 JGI24738J21930_10018970
189 rootL2_10264828
190 Ga0070683_100011786
191 Ga0070683_100457511
192 Ga0070683_100977411
193 Ga0070690_100539910
194 Ga0070682_100343729
195 Ga0070682_100629658
196 Ga0068868_100417014
197 Ga0070660_100294729
198 Ga0070687_100025576
199 Ga0070661_100642368
200 Ga0070692_10009080
201 Ga0070674_100061277
202 Ga0070674_100524325
203 Ga0070667_100210910
204 Ga0070714_100884222
205 Ga0070701_10004692
206 Ga0070663_100033928
207 Ga0070663_100528301
208 Ga0068867_100005221
209 Ga0070685_10067228
210 Ga0070685_10121032
211 Ga0070684_100005400
212 Ga0068853_100102329
213 Ga0070672_100139354
214 Ga0070686_100054808
215 Ga0070665_100004729
216 Ga0068855_100079119
217 Ga0068855_100117062
218 Ga0070664_100005545
219 Ga0070664_100242309
220 Ga0068856_100627593
221 Ga0068852_100005282
222 Ga0068852_100007180
223 Ga0068861_100353015
224 Ga0068851_10094372
225 Ga0068870_10008303
226 Ga0070717_10134050
227 Ga0075365_10015851
228 Ga0075365_10047554
229 Ga0075428_100189489
230 Ga0075430_100486660
231 Ga0068865_100018614
232 Ga0068865_100302005
233 Ga0105240_10127628
234 Ga0111539_10056953
235 Ga0105245_10130871
236 Ga0105243_10006984
237 Ga0105243_10404818
238 Ga0105242_10647664
239 Ga0105248_10325195
240 Ga0105237_10249716
241 Ga0105238_10063372
242 Ga0105238_10088708
243 Ga0105238_10587990
244 Ga0105249_10015640
245 Ga0105239_10395807
246 Ga0163163_10093934
247 Ga0157380_10013797
248 Ga0157376_10209188
249 Ga0207656_10109632
250 Ga0207688_10276562
251 Ga0207647_10027024
252 Ga0207643_10007415
253 Ga0207654_10384959
254 Ga0207662_10127508
255 Ga0207657_10479030
256 Ga0207652_10639890
257 Ga0207694_10112499
258 Ga0207694_10120301
259 Ga0207687_10314752
260 Ga0207690_10015902
261 Ga0207690_10050792
262 Ga0207706_10085135
263 Ga0207709_10048574
264 Ga0207669_10270125
265 Ga0207704_10036595
266 Ga0207691_10007959
267 Ga0207661_10017618
268 Ga0207661_10248202
269 Ga0207679_10091472
270 Ga0207679_10306299
271 Ga0207679_10474718
272 Ga0207667_10016905
273 Ga0207658_10067577
274 Ga0207677_10048053
275 Ga0207639_10133635
276 Ga0207678_10203658
277 Ga0207678_10252441
278 Ga0207708_10006573
279 Ga0207702_10304885
280 Ga0207648_10004906
281 Ga0207676_10066118
282 Ga0207675_100004039
283 Ga0207683_10141486
284 Ga0207683_10380526
285 Ga0207698_10133165
286 Ga0268266_10004367
287 Ga0307415_100111741
288 Ga0307415_100586277
289 Ga0373931_0288844
290 Ga0395900_0052647
291 Ga0395900_0097607
292 Ga0395898_0085559
293 Ga0395898_0383001
294 Ga0395905_0015314
295 Ga0395905_0968262
296 Ga0395901_0010940
297 Ga0395901_0031806
298 Ga0395901_0209591
299 Ga0451793_0734132
300 Ga0451793_1044973
301 Ga0451800_0980136
302 Ga0451800_1244357
303 Ga0451835_0296577
304 Ga0451839_0277874
305 Ga0451843_1486407
306 Ga0451853_0036255
307 Ga0466972_0062404
308 Ga0466972_0080924
309 Ga0466972_0203846
310 Ga0466965_0061500
311 Ga0466966_0093903
312 Ga0466961_0057598
313 Ga0466970_0006039
314 Ga0466970_0017754
315 Ga0466970_0132404
316 Ga0466957_0219931
317 Ga0466960_0014721
318 Ga0466960_0037545
319 Ga0466960_0046262
320 Ga0466960_0073153
321 Ga0466960_0107058
322 Ga0466967_0021232
323 Ga0466967_0068979
324 Ga0466967_0292941
325 Ga0466967_0378528
326 Ga0466967_0417296
327 Ga0466967_0468493
328 Ga0466967_0545378
329 Ga0466967_0720391
330 Ga0495653_0018195
331 Ga0495582_0259520
332 Ga0495664_0115983
333 Ga0495658_0077098
334 Ga0495600_0201557
335 Ga0495581_0165595
336 Ga0495581_0177927
337 Ga0495676_0273275
338 Ga0495680_0282837
339 Ga0496102_0009030
340 Ga0496102_0018713
341 Ga0496103_0008535
342 Ga0496103_0117828
343 Ga0496104_0010913
344 Ga0496105_0042379
345 Ga0496107_0322222
346 Ga0496108_0244435
347 Ga0496109_0005316
348 Ga0496109_0371510
349 Ga0496110_0003873
350 Ga0496110_0105296
351 Ga0496110_0108972
352 Ga0496110_0263399
353 Ga0496111_0004818
354 Ga0496111_0184390
355 Ga0496113_0027668
356 Ga0496113_0848042
357 Ga0496114_0036260
358 Ga0496114_0052923
359 Ga0496114_0350307
360 Ga0496118_0058415
361 Ga0496126_0230747
362 Ga0501067_0011899
363 Ga0501069_0242565
364 Ga0501070_0192209
365 nmdc:mga0yw44_72469_c1
366 nmdc:mga0yw44_9708_c1
367 nmdc:mga08y16_53602_c1
368 Ga0495619_0501925
369 Ga0500641_0005707
370 Ga0500556_0002907
371 Ga0500573_0003926
372 2623500502

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00970

FAD_binding_6

Oxidoreductase FAD-binding domain

45

141

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
4eh1-assembly1.cif.gz_A crystal structure of the flavohem-like-fad/nad binding domain of nitric oxide dioxygenase from vibrio cholerae o1 biovar el tor 0.8607 5 228
6o0a-assembly1.cif.gz_A crystal structure of flavohemoglobin from malassezia yamatoensis with bound fad and heme determined by iron sad phasing 0.8345 8 228
4eh1-assembly1.cif.gz_A crystal structure of the flavohem-like-fad/nad binding domain of nitric oxide dioxygenase from vibrio cholerae o1 biovar el tor 0.8341 5 228
5ufa-assembly1.cif.gz_A crystal structure of a ferredoxin nadp+ reductase from neisseria gonorrhoeae with bound fad and nadp 0.8258 9 226
1gvh-assembly1.cif.gz_A the x-ray structure of ferric escherichia coli flavohemoglobin reveals an unespected geometry of the distal heme pocket 0.8219 8 228
ID Description Score Start End Superfamily
5ufaC01 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Translation factors 0.9054 9 98 2.40.30.10
1a8pA01 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Translation factors 0.899 9 97 2.40.30.10
af_P71846_339_440_2.40.30.10 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Translation factors 0.8974 8 102 2.40.30.10
af_P9WNE9_60_162_2.40.30.10 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Translation factors 0.8921 11 103 2.40.30.10
1gvhA02 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Translation factors 0.8904 8 106 2.40.30.10
ID Description Score Start End GO Terms
AF-A0A6G6WKW0-F1-model_v4 Oxidoreductase 0.9855 16 231 GO:0016491
GO:0051537
AF-A0A399NSG7-F1-model_v4 Oxidoreductase 0.982 7 148 GO:0016491
GO:0051537
AF-A0A0D5CMF2-F1-model_v4 Oxidoreductase 0.9808 15 231 GO:0016491
GO:0051537
AF-A0A399SUB0-F1-model_v4 Oxidoreductase 0.9752 6 170 GO:0016491
GO:0051537
AF-A0A6G6WKW0-F1-model_v4 Oxidoreductase 0.9722 16 231 GO:0016491
GO:0051537

Map