F285497

General Info

Members Datasets Scaffolds Average Seq Length
186 135 181 147

Family's Representative Sequence

Representative Sequence 3300005343|Ga0070687_100007836|Ga0070687_1000078365
Length 164
Sequence MAGATETWRPEAVVFCGVQAAGKSTYYRERFFETHVRISMDLLKTRNRERLLLQACLAARQPFVVDNTNPLAADRARYIEPARAAGFLVSGYFFRATTREAIARNKQRTDKPSIPVPGLLGTYKRLEEPRWEEGFDTLFAVTLTPANVFVVEEIPREQANPDAG

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2643221638 Duganella sp. Root336D2 Isolate Unclassified
3 2818991444 Filimonas endophytica 3197 Isolate Unclassified
4 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
5 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
6 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
7 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
8 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
9 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
10 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
11 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
12 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
13 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
14 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
15 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
16 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
21 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
26 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
27 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
28 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
29 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
30 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
31 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
32 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
35 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
36 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
37 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
38 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
39 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
40 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
41 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
42 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
43 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
44 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
45 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
46 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
48 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
57 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
58 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
59 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
60 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
61 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
62 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
63 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
64 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
65 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
66 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
67 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
68 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
69 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
70 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
71 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
72 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
73 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
74 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
75 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
76 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
77 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
78 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
79 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
80 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
81 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
82 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
83 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
84 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
85 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
86 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
87 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
88 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
89 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
90 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
91 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
92 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
93 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
94 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
95 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
96 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
97 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
98 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
99 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
100 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
101 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
102 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
103 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
104 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
105 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
106 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
107 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
108 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
109 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
110 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
111 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
112 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
113 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
114 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
115 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
116 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
118 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
119 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
120 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
121 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
122 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
123 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
124 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
125 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
126 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
127 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
128 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
129 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
130 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
131 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
132 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
133 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
134 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
135 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.31
Metatranscriptomes 0
Isolates 2.69

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.22
Nodule 0
Rhizoplane 0
Rhizosphere 77.42
Stem 0
Stem Tuber 0
Unclassified 12.37

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_3568137 2162886007 Bacteria 11009
2 rootL2_10132828 3300003322 Bacteria 3885
3 rootL2_10275928 3300003322 Bacteria 2603
4 rootH1_10004732 3300003323 Bacteria 44809
5 rootH1_10392264 3300003323 Bacteria 2183
6 Ga0055535_1001306 3300003761 Bacteria 13333
7 Ga0065714_10004857 3300005288 Bacteria 5363
8 Ga0065704_10070827 3300005289 Bacteria 15645
9 Ga0065704_10092856 3300005289 Bacteria 2630
10 Ga0070690_100284982 3300005330 Bacteria 1180
11 Ga0070687_100007836 3300005343 Bacteria 4487
12 Ga0070687_100214365 3300005343 Bacteria 1175
13 Ga0070674_100246865 3300005356 Bacteria 1400
14 Ga0070708_100001778 3300005445 Bacteria 16551
15 Ga0070685_10005456 3300005466 Bacteria 6438
16 Ga0070685_10008520 3300005466 Bacteria 5275
17 Ga0070706_100028934 3300005467 Bacteria 5104
18 Ga0070707_100913764 3300005468 Bacteria 842
19 Ga0070698_100295157 3300005471 Bacteria 1552
20 Ga0068853_100200638 3300005539 Bacteria 1815
21 Ga0070686_100000060 3300005544 Bacteria 84580
22 Ga0068855_100000014 3300005563 Bacteria 232720
23 Ga0068855_100014583 3300005563 Bacteria 9466
24 Ga0070664_101671793 3300005564 Unclassified 603
25 Ga0068857_100250582 3300005577 Bacteria 1623
26 Ga0068857_100490466 3300005577 Unclassified 1152
27 Ga0068856_100530656 3300005614 Unclassified 1198
28 Ga0081455_10001633 3300005937 Bacteria 27345
29 Ga0081455_10118669 3300005937 Bacteria 2088
30 Ga0081538_10000468 3300005981 Bacteria 45298
31 Ga0075431_100650407 3300006847 Unclassified 1035
32 Ga0075433_10167250 3300006852 Bacteria 1957
33 Ga0075434_100627946 3300006871 Bacteria 1093
34 Ga0068865_100087829 3300006881 Bacteria 2248
35 Ga0105240_10105494 3300009093 Bacteria 3421
36 Ga0105240_10179755 3300009093 Bacteria 2498
37 Ga0114129_10344358 3300009147 Bacteria 1976
38 Ga0105241_10096033 3300009174 Bacteria 2347
39 Ga0105238_10000165 3300009551 Bacteria 71706
40 Ga0105239_10103311 3300010375 Bacteria 3154
41 Ga0105239_11635935 3300010375 Bacteria 745
42 Ga0157371_10000034 3300013102 Bacteria 223947
43 Ga0163162_10070979 3300013306 Bacteria 3535
44 Ga0157372_11104047 3300013307 Unclassified 918
45 Ga0182006_1001022 3300015261 Bacteria 18287
46 Ga0183373_1010 3300015682 Bacteria 196982
47 Ga0213875_10197720 3300021388 Bacteria 946
48 Ga0209436_105656 3300025208 Unclassified 2835
49 Ga0209258_100278 3300025242 Bacteria 86316
50 Ga0209646_1007780 3300025246 Bacteria 1739
51 Ga0209148_1000248 3300025254 Bacteria 86083
52 Ga0207426_1028470 3300025302 Unclassified 1852
53 Ga0207695_10081374 3300025913 Bacteria 3277
54 Ga0207662_10044350 3300025918 Bacteria 2626
55 Ga0207662_10067234 3300025918 Bacteria 2161
56 Ga0207646_10520642 3300025922 Bacteria 1071
57 Ga0207646_10926368 3300025922 Bacteria 772
58 Ga0207694_10000091 3300025924 Bacteria 101725
59 Ga0207679_11856653 3300025945 Unclassified 550
60 Ga0207667_10000049 3300025949 Bacteria 235027
61 Ga0207667_10052623 3300025949 Bacteria 4287
62 Ga0207667_10606547 3300025949 Unclassified 1103
63 Ga0207640_10555198 3300025981 Bacteria 965
64 Ga0207674_10443729 3300026116 Bacteria 1254
65 Ga0207674_11148825 3300026116 Unclassified 746
66 Ga0307515_10002289 3300028794 Bacteria 41911
67 Ga0307515_10193085 3300028794 Bacteria 1939
68 Ga0307408_101358325 3300031548 Unclassified 668
69 Ga0307406_10839931 3300031901 Bacteria 778
70 Ga0307416_101381651 3300032002 Bacteria 810
71 Ga0307416_101675428 3300032002 Unclassified 741
72 Ga0307416_102906313 3300032002 Unclassified 573
73 Ga0307411_10112337 3300032005 Bacteria 1953
74 Ga0307415_101196320 3300032126 Viruses 716
75 Ga0373959_0000303 3300034820 Bacteria 10310
76 Ga0373933_0720385 3300035724 Bacteria 656
77 Ga0395900_0627538 3300037418 Bacteria 1013
78 Ga0436364_0562768 3300037853 Bacteria 1828
79 Ga0400483_187102 3300039062 Bacteria 1053
80 Ga0436363_0489795 3300039450 Bacteria 672
81 Ga0466972_0000007 3300044658 Bacteria 277010
82 Ga0466972_0244895 3300044658 Bacteria 838
83 Ga0453684_0002519 3300044712 Bacteria 44144
84 Ga0453684_0003266 3300044712 Bacteria 37024
85 Ga0453684_0005664 3300044712 Bacteria 24519
86 Ga0453684_0018099 3300044712 Bacteria 10845
87 Ga0453684_0135808 3300044712 Bacteria 2945
88 Ga0453684_0614029 3300044712 Unclassified 1190
89 Ga0495638_0374091 3300046460 Bacteria 746
90 Ga0495651_0101149 3300046462 Bacteria 2146
91 Ga0495639_0225553 3300046475 Bacteria 922
92 Ga0495585_0000089 3300046492 Bacteria 96296
93 Ga0495606_0106845 3300046507 Bacteria 1694
94 Ga0495610_0001110 3300046512 Bacteria 24503
95 Ga0495616_0026856 3300046513 Bacteria 3058
96 Ga0495648_0055960 3300046524 Bacteria 2375
97 Ga0495652_0352252 3300046529 Bacteria 1054
98 Ga0495609_0015647 3300046538 Bacteria 3548
99 Ga0495622_0099261 3300046557 Bacteria 1335
100 Ga0495668_0000011 3300046616 Bacteria 472186
101 Ga0495625_0000005 3300046660 Bacteria 596135
102 Ga0495625_0002230 3300046660 Bacteria 21417
103 Ga0495661_0025240 3300046665 Bacteria 3840
104 Ga0495658_0004674 3300046683 Bacteria 6735
105 Ga0495669_0546646 3300046684 Unclassified 563
106 Ga0495649_0000003 3300046694 Bacteria 880817
107 Ga0495660_0030595 3300046810 Bacteria 3032
108 Ga0495660_0136358 3300046810 Bacteria 1226
109 Ga0496116_0001967 3300048919 Bacteria 22148
110 Ga0496117_0014499 3300048920 Bacteria 6785
111 Ga0496121_0307491 3300048924 Unclassified 1073
112 Ga0496122_0011075 3300048925 Bacteria 9197
113 Ga0496123_0051504 3300048926 Bacteria 2741
114 Ga0496124_0059428 3300048927 Bacteria 3212
115 Ga0496124_0174131 3300048927 Bacteria 1663
116 Ga0496126_0020005 3300048929 Bacteria 6575
117 Ga0495682_0014587 3300049460 Bacteria 2979
118 Ga0501031_0074160 3300049568 Bacteria 2216
119 Ga0501031_0437336 3300049568 Bacteria 845
120 Ga0501032_0130406 3300049569 Bacteria 1659
121 Ga0501032_0156377 3300049569 Bacteria 1498
122 Ga0501033_0230833 3300049570 Bacteria 1315
123 Ga0501036_0064873 3300049572 Bacteria 3090
124 Ga0501036_1186037 3300049572 Unclassified 622
125 Ga0501037_0326982 3300049573 Bacteria 1061
126 Ga0501038_0051393 3300049574 Bacteria 3557
127 Ga0501038_0308607 3300049574 Bacteria 1240
128 Ga0501039_0125012 3300049575 Bacteria 2017
129 Ga0501039_0290855 3300049575 Bacteria 1284
130 Ga0501040_0195553 3300049576 Bacteria 1435
131 Ga0501040_0215219 3300049576 Bacteria 1366
132 Ga0501041_0061899 3300049577 Bacteria 2291
133 Ga0501041_0102264 3300049577 Bacteria 1774
134 Ga0501042_0041243 3300049578 Bacteria 3282
135 Ga0501042_0342679 3300049578 Bacteria 1080
136 Ga0501048_0072932 3300049582 Bacteria 2423
137 Ga0501048_0100716 3300049582 Bacteria 2038
138 Ga0501069_0174717 3300049585 Bacteria 1240
139 Ga0501071_0113389 3300049587 Bacteria 2005
140 Ga0501071_0760324 3300049587 Bacteria 747
141 Ga0501072_0017460 3300049588 Bacteria 5514
142 Ga0501072_0047213 3300049588 Bacteria 3391
143 Ga0501074_0131025 3300049590 Bacteria 1794
144 Ga0501074_0896112 3300049590 Unclassified 624
145 Ga0501076_0178444 3300049592 Bacteria 1731
146 Ga0501077_0099467 3300049593 Bacteria 1843
147 Ga0501077_0251203 3300049593 Bacteria 1124
148 Ga0501079_0133500 3300049741 Bacteria 1932
149 Ga0501081_0097679 3300049743 Bacteria 2073
150 Ga0501081_0152612 3300049743 Bacteria 1660
151 Ga0501081_1492287 3300049743 Unclassified 513
152 Ga0501241_005513 3300049758 Unclassified 2357
153 Ga0501241_014592 3300049758 Bacteria 1428
154 Ga0501035_0136309 3300049822 Bacteria 2137
155 Ga0501045_0034961 3300049824 Bacteria 3648
156 Ga0501045_0146927 3300049824 Bacteria 1754
157 nmdc:mga0k408_83439_c1 3300050493 Bacteria 1873
158 nmdc:mga05p37_1294280_c1 3300050507 Bacteria 744
159 nmdc:mga0qj67_178129_c1 3300050509 Bacteria 1726
160 nmdc:mga06r32_101350_c1 3300050510 Bacteria 2826
161 nmdc:mga06r32_1113181_c1 3300050510 Bacteria 738
162 nmdc:mga06r32_1228829_c1 3300050510 Unclassified 695
163 nmdc:mga0n895_1186601_c1 3300050512 Unclassified 738
164 nmdc:mga0n895_322426_c1 3300050512 Bacteria 1566
165 nmdc:mga0a205_170667_c1 3300050515 Bacteria 2071
166 Ga0500644_0000151 3300053088 Bacteria 43560
167 Ga0500644_0073287 3300053088 Unclassified 1240
168 Ga0500646_0015589 3300053090 Bacteria 1980
169 Ga0500646_0021160 3300053090 Bacteria 1732
170 Ga0500646_0180123 3300053090 Unclassified 716
171 Ga0500647_0225805 3300053091 Bacteria 836
172 Ga0500650_0003661 3300053098 Bacteria 5404
173 Ga0500618_038317 3300053125 Bacteria 1106
174 Ga0500628_000093 3300053129 Bacteria 20434
175 Ga0500658_0188872 3300053134 Bacteria 940
176 Ga0500616_0116255 3300053153 Unclassified 1284
177 Ga0500627_0000379 3300053158 Bacteria 12066
178 Ga0501084_0086536 3300054114 Bacteria 2631
179 Ga0501084_0693976 3300054114 Bacteria 858
180 Ga0500661_050375 3300055283 Unclassified 744
181 Ga0501082_0016285 3300060353 Bacteria 6401

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049568 Ga0501031_0074160 Ga0501031_0074160_927_1340 118
2 3300049574 Ga0501038_0051393 Ga0501038_0051393_1718_2131 118
3 3300049575 Ga0501039_0290855 Ga0501039_0290855_793_1206 118
4 3300049576 Ga0501040_0195553 Ga0501040_0195553_513_926 118
5 3300049577 Ga0501041_0061899 Ga0501041_0061899_1444_1857 118
6 3300049582 Ga0501048_0100716 Ga0501048_0100716_773_1186 118
7 3300049585 Ga0501069_0174717 Ga0501069_0174717_231_644 118
8 3300049588 Ga0501072_0017460 Ga0501072_0017460_3240_3653 118
9 3300049593 Ga0501077_0099467 Ga0501077_0099467_1132_1545 118
10 3300049741 Ga0501079_0133500 Ga0501079_0133500_764_1177 118
11 3300049743 Ga0501081_0152612 Ga0501081_0152612_780_1193 118
12 3300049822 Ga0501035_0136309 Ga0501035_0136309_1343_1756 118
13 3300049824 Ga0501045_0146927 Ga0501045_0146927_241_654 118
14 3300054114 Ga0501084_0086536 Ga0501084_0086536_411_824 118
15 3300005937 Ga0081455_10118669 Ga0081455_101186691 123
16 3300049569 Ga0501032_0130406 Ga0501032_0130406_1052_1465 134
17 3300049572 Ga0501036_1186037 Ga0501036_1186037_124_537 134
18 3300049574 Ga0501038_0308607 Ga0501038_0308607_771_1184 134
19 3300049578 Ga0501042_0342679 Ga0501042_0342679_174_587 134
20 3300049590 Ga0501074_0896112 Ga0501074_0896112_74_487 134
21 3300049743 Ga0501081_1492287 Ga0501081_1492287_48_461 134
22 3300060353 Ga0501082_0016285 Ga0501082_0016285_4728_5141 134
23 3300005981 Ga0081538_10000468 Ga0081538_1000046822 137
24 3300049568 Ga0501031_0437336 Ga0501031_0437336_10_432 137
25 3300049569 Ga0501032_0156377 Ga0501032_0156377_18_440 137
26 3300049570 Ga0501033_0230833 Ga0501033_0230833_849_1271 137
27 3300049572 Ga0501036_0064873 Ga0501036_0064873_2204_2656 137
28 3300049573 Ga0501037_0326982 Ga0501037_0326982_34_486 137
29 3300049575 Ga0501039_0125012 Ga0501039_0125012_1472_1894 137
30 3300049576 Ga0501040_0215219 Ga0501040_0215219_681_1133 137
31 3300049577 Ga0501041_0102264 Ga0501041_0102264_294_716 137
32 3300049578 Ga0501042_0041243 Ga0501042_0041243_895_1347 137
33 3300049582 Ga0501048_0072932 Ga0501048_0072932_423_845 137
34 3300049587 Ga0501071_0113389 Ga0501071_0113389_494_946 137
35 3300049587 Ga0501071_0760324 Ga0501071_0760324_272_694 137
36 3300049588 Ga0501072_0047213 Ga0501072_0047213_688_1110 137
37 3300049590 Ga0501074_0131025 Ga0501074_0131025_333_755 137
38 3300049592 Ga0501076_0178444 Ga0501076_0178444_875_1327 137
39 3300049593 Ga0501077_0251203 Ga0501077_0251203_676_1098 137
40 3300049743 Ga0501081_0097679 Ga0501081_0097679_1363_1785 137
41 3300049824 Ga0501045_0034961 Ga0501045_0034961_1793_2245 137
42 3300050510 nmdc:mga06r32_1113181_c1 nmdc:mga06r32_1113181_c1_294_716 137
43 3300054114 Ga0501084_0693976 Ga0501084_0693976_343_795 137
44 3300037418 Ga0395900_0627538 Ga0395900_0627538_400_828 142
45 3300003322 rootL2_10275928 rootL2_102759283 143
46 3300006852 Ga0075433_10167250 Ga0075433_101672501 144
47 3300006871 Ga0075434_100627946 Ga0075434_1006279461 144
48 iso_pu_bacteria 2643221638 2644216638 144
49 iso_pu_bacteria 2818991444 2819586498 144
50 iso_pu_bacteria 2818991460 2819678756 144
51 iso_pu_bacteria 2849281842 2849282246 144
52 3300005466 Ga0070685_10008520 Ga0070685_100085207 145
53 3300006881 Ga0068865_100087829 Ga0068865_1000878292 145
54 3300025981 Ga0207640_10555198 Ga0207640_105551982 145
55 3300031548 Ga0307408_101358325 Ga0307408_1013583251 145
56 3300039062 Ga0400483_187102 Ga0400483_187102_70_513 146
57 3300044712 Ga0453684_0002519 Ga0453684_0002519_39162_39602 146
58 iso_pu_bacteria 2928078545 2928080546 147
59 2162886007 SwRhRL2b_contig_3568137 SwRhRL2b_0173.00004130 148
60 3300003322 rootL2_10132828 rootL2_101328283 148
61 3300003323 rootH1_10004732 rootH1_1000473218 148
62 3300003323 rootH1_10392264 rootH1_103922641 148
63 3300003761 Ga0055535_1001306 Ga0055535_10013063 148
64 3300005288 Ga0065714_10004857 Ga0065714_100048575 148
65 3300005289 Ga0065704_10070827 Ga0065704_1007082711 148
66 3300005289 Ga0065704_10092856 Ga0065704_100928562 148
67 3300005330 Ga0070690_100284982 Ga0070690_1002849821 148
68 3300005343 Ga0070687_100007836 Ga0070687_1000078365 148
69 3300005343 Ga0070687_100214365 Ga0070687_1002143652 148
70 3300005356 Ga0070674_100246865 Ga0070674_1002468652 148
71 3300005445 Ga0070708_100001778 Ga0070708_1000017789 148
72 3300005466 Ga0070685_10005456 Ga0070685_100054565 148
73 3300005467 Ga0070706_100028934 Ga0070706_1000289344 148
74 3300005468 Ga0070707_100913764 Ga0070707_1009137642 148
75 3300005471 Ga0070698_100295157 Ga0070698_1002951573 148
76 3300005539 Ga0068853_100200638 Ga0068853_1002006382 148
77 3300005544 Ga0070686_100000060 Ga0070686_10000006080 148
78 3300005563 Ga0068855_100000014 Ga0068855_10000001417 148
79 3300005563 Ga0068855_100014583 Ga0068855_1000145836 148
80 3300005564 Ga0070664_101671793 Ga0070664_1016717932 148
81 3300005577 Ga0068857_100250582 Ga0068857_1002505822 148
82 3300005577 Ga0068857_100490466 Ga0068857_1004904661 148
83 3300005614 Ga0068856_100530656 Ga0068856_1005306562 148
84 3300005937 Ga0081455_10001633 Ga0081455_1000163311 148
85 3300006847 Ga0075431_100650407 Ga0075431_1006504072 148
86 3300009093 Ga0105240_10105494 Ga0105240_101054943 148
87 3300009093 Ga0105240_10179755 Ga0105240_101797551 148
88 3300009147 Ga0114129_10344358 Ga0114129_103443583 148
89 3300009174 Ga0105241_10096033 Ga0105241_100960333 148
90 3300009551 Ga0105238_10000165 Ga0105238_1000016544 148
91 3300010375 Ga0105239_10103311 Ga0105239_101033115 148
92 3300010375 Ga0105239_11635935 Ga0105239_116359352 148
93 3300013102 Ga0157371_10000034 Ga0157371_1000003433 148
94 3300013306 Ga0163162_10070979 Ga0163162_100709795 148
95 3300013307 Ga0157372_11104047 Ga0157372_111040472 148
96 3300015261 Ga0182006_1001022 Ga0182006_100102218 148
97 3300015682 Ga0183373_1010 Ga0183373_1010177 148
98 3300021388 Ga0213875_10197720 Ga0213875_101977202 148
99 3300025208 Ga0209436_105656 Ga0209436_1056562 148
100 3300025242 Ga0209258_100278 Ga0209258_10027854 148
101 3300025246 Ga0209646_1007780 Ga0209646_10077802 148
102 3300025254 Ga0209148_1000248 Ga0209148_100024854 148
103 3300025302 Ga0207426_1028470 Ga0207426_10284703 148
104 3300025913 Ga0207695_10081374 Ga0207695_100813743 148
105 3300025918 Ga0207662_10044350 Ga0207662_100443502 148
106 3300025918 Ga0207662_10067234 Ga0207662_100672343 148
107 3300025922 Ga0207646_10520642 Ga0207646_105206422 148
108 3300025922 Ga0207646_10926368 Ga0207646_109263682 148
109 3300025924 Ga0207694_10000091 Ga0207694_1000009144 148
110 3300025945 Ga0207679_11856653 Ga0207679_118566531 148
111 3300025949 Ga0207667_10000049 Ga0207667_1000004916 148
112 3300025949 Ga0207667_10052623 Ga0207667_100526232 148
113 3300025949 Ga0207667_10606547 Ga0207667_106065471 148
114 3300026116 Ga0207674_10443729 Ga0207674_104437292 148
115 3300026116 Ga0207674_11148825 Ga0207674_111488252 148
116 3300028794 Ga0307515_10002289 Ga0307515_1000228933 148
117 3300028794 Ga0307515_10193085 Ga0307515_101930852 148
118 3300031901 Ga0307406_10839931 Ga0307406_108399312 148
119 3300032002 Ga0307416_101381651 Ga0307416_1013816512 148
120 3300032002 Ga0307416_101675428 Ga0307416_1016754281 148
121 3300032002 Ga0307416_102906313 Ga0307416_1029063131 148
122 3300032005 Ga0307411_10112337 Ga0307411_101123372 148
123 3300032126 Ga0307415_101196320 Ga0307415_1011963201 148
124 3300034820 Ga0373959_0000303 Ga0373959_0000303_3329_3802 148
125 3300035724 Ga0373933_0720385 Ga0373933_0720385_53_502 148
126 3300037853 Ga0436364_0562768 Ga0436364_0562768_341_793 148
127 3300039450 Ga0436363_0489795 Ga0436363_0489795_136_588 148
128 3300044658 Ga0466972_0000007 Ga0466972_0000007_57861_58307 148
129 3300044658 Ga0466972_0244895 Ga0466972_0244895_45_491 148
130 3300044712 Ga0453684_0003266 Ga0453684_0003266_881_1330 148
131 3300044712 Ga0453684_0005664 Ga0453684_0005664_10921_11367 148
132 3300044712 Ga0453684_0018099 Ga0453684_0018099_335_784 148
133 3300044712 Ga0453684_0135808 Ga0453684_0135808_1283_1777 148
134 3300044712 Ga0453684_0614029 Ga0453684_0614029_407_856 148
135 3300046460 Ga0495638_0374091 Ga0495638_0374091_114_632 148
136 3300046462 Ga0495651_0101149 Ga0495651_0101149_1602_2048 148
137 3300046475 Ga0495639_0225553 Ga0495639_0225553_374_820 148
138 3300046492 Ga0495585_0000089 Ga0495585_0000089_58228_58674 148
139 3300046507 Ga0495606_0106845 Ga0495606_0106845_399_845 148
140 3300046512 Ga0495610_0001110 Ga0495610_0001110_5333_5779 148
141 3300046513 Ga0495616_0026856 Ga0495616_0026856_2258_2704 148
142 3300046524 Ga0495648_0055960 Ga0495648_0055960_1760_2206 148
143 3300046529 Ga0495652_0352252 Ga0495652_0352252_279_725 148
144 3300046538 Ga0495609_0015647 Ga0495609_0015647_513_959 148
145 3300046557 Ga0495622_0099261 Ga0495622_0099261_169_615 148
146 3300046616 Ga0495668_0000011 Ga0495668_0000011_428683_429201 148
147 3300046660 Ga0495625_0000005 Ga0495625_0000005_450523_450969 148
148 3300046660 Ga0495625_0002230 Ga0495625_0002230_10276_10722 148
149 3300046665 Ga0495661_0025240 Ga0495661_0025240_3195_3641 148
150 3300046683 Ga0495658_0004674 Ga0495658_0004674_2563_3009 148
151 3300046684 Ga0495669_0546646 Ga0495669_0546646_22_504 148
152 3300046694 Ga0495649_0000003 Ga0495649_0000003_631281_631727 148
153 3300046810 Ga0495660_0030595 Ga0495660_0030595_743_1189 148
154 3300046810 Ga0495660_0136358 Ga0495660_0136358_78_524 148
155 3300048919 Ga0496116_0001967 Ga0496116_0001967_20009_20455 148
156 3300048920 Ga0496117_0014499 Ga0496117_0014499_5210_5656 148
157 3300048924 Ga0496121_0307491 Ga0496121_0307491_124_573 148
158 3300048925 Ga0496122_0011075 Ga0496122_0011075_5222_5668 148
159 3300048926 Ga0496123_0051504 Ga0496123_0051504_1092_1538 148
160 3300048927 Ga0496124_0059428 Ga0496124_0059428_2040_2486 148
161 3300048927 Ga0496124_0174131 Ga0496124_0174131_1089_1535 148
162 3300048929 Ga0496126_0020005 Ga0496126_0020005_3307_3753 148
163 3300049460 Ga0495682_0014587 Ga0495682_0014587_2134_2580 148
164 3300049758 Ga0501241_005513 Ga0501241_005513_678_1124 148
165 3300049758 Ga0501241_014592 Ga0501241_014592_11_457 148
166 3300050493 nmdc:mga0k408_83439_c1 nmdc:mga0k408_83439_c1_1139_1585 148
167 3300050507 nmdc:mga05p37_1294280_c1 nmdc:mga05p37_1294280_c1_218_667 148
168 3300050509 nmdc:mga0qj67_178129_c1 nmdc:mga0qj67_178129_c1_1102_1551 148
169 3300050510 nmdc:mga06r32_101350_c1 nmdc:mga06r32_101350_c1_1538_1987 148
170 3300050510 nmdc:mga06r32_1228829_c1 nmdc:mga06r32_1228829_c1_180_629 148
171 3300050512 nmdc:mga0n895_1186601_c1 nmdc:mga0n895_1186601_c1_199_669 148
172 3300050512 nmdc:mga0n895_322426_c1 nmdc:mga0n895_322426_c1_568_1038 148
173 3300050515 nmdc:mga0a205_170667_c1 nmdc:mga0a205_170667_c1_115_585 148
174 3300053088 Ga0500644_0000151 Ga0500644_0000151_23252_23698 148
175 3300053088 Ga0500644_0073287 Ga0500644_0073287_697_1143 148
176 3300053090 Ga0500646_0015589 Ga0500646_0015589_271_717 148
177 3300053090 Ga0500646_0021160 Ga0500646_0021160_351_797 148
178 3300053090 Ga0500646_0180123 Ga0500646_0180123_106_552 148
179 3300053091 Ga0500647_0225805 Ga0500647_0225805_68_514 148
180 3300053098 Ga0500650_0003661 Ga0500650_0003661_83_529 148
181 3300053125 Ga0500618_038317 Ga0500618_038317_254_700 148
182 3300053129 Ga0500628_000093 Ga0500628_000093_14022_14486 148
183 3300053134 Ga0500658_0188872 Ga0500658_0188872_420_866 148
184 3300053153 Ga0500616_0116255 Ga0500616_0116255_616_1062 148
185 3300053158 Ga0500627_0000379 Ga0500627_0000379_1124_1570 148
186 3300055283 Ga0500661_050375 Ga0500661_050375_12_458 148

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13671

AAA_33

AAA domain

13

118

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
3zvn-assembly1.cif.gz_A the structural basis for substrate recognition by mammalian polynucleotide kinase 3' phosphatase 0.9413 2 136
3u7g-assembly1.cif.gz_A crystal structure of mpnkp catalytic fragment (d170a) bound to single-stranded dna (tcctap) 0.9167 2 137
1yj5-assembly1.cif.gz_B molecular architecture of mammalian polynucleotide kinase, a dna repair enzyme 0.8787 2 148
3u7e-assembly1.cif.gz_B crystal structure of mpnkp catalytic fragment (d170a) 0.8715 2 137
4mde-assembly1.cif.gz_A structure of bacterial polynucleotide kinase product complex bound to gdp and dna 0.8599 2 133
ID Description Score Start End Superfamily
af_O13911_231_407_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9582 1 136 3.40.50.300
af_A0A0G2JUH4_338_483_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9476 2 113 3.40.50.300
af_Q4DQH2_292_462_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.929 1 136 3.40.50.300
af_Q9VHS0_339_521_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9127 2 133 3.40.50.300
af_A0A1D6JZE9_255_426_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8917 1 131 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A3B7RRP2-F1-model_v4 ATP-binding protein 0.9797 1 145 GO:0003690
GO:0005524
GO:0006281
GO:0046403
GO:0046404
AF-A0A0C2CXV7-F1-model_v4 Kinase 0.9793 1 133 GO:0003690
GO:0006281
GO:0046403
GO:0046404
AF-L8MY86-F1-model_v4 Kinase 0.9788 1 148 GO:0003690
GO:0006281
GO:0046403
GO:0046404
AF-A0A497ZGB1-F1-model_v4 deleted 0.9784 1 131
AF-A0A2A2QVG4-F1-model_v4 Kinase 0.978 1 129 GO:0003690
GO:0006281
GO:0046403
GO:0046404

Feature Viewer

pLDDT pTM Quality
93.08 0.88 High
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Predicted Structure (AlphaFold2)

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