F284969
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 185 | 130 | 160 | 437 |
Family's Representative Sequence
| Representative Sequence | 3300048920|Ga0496117_0002244|Ga0496117_0002244_5437_6861 |
| Length | 474 |
| Sequence | MKRIGIVLPWVLAAGLAGCSDTAHLDVMDGSGPSPQLPPPNKTLVPTVNIAPAIGWPQGAKPQAAAGTQVTAFADKLDHPRWLYVLPNGDVLVAETNAPPKPEDGKGLRGWVMGKAMQRAGAGVPSANRITLLRDADHDGVAEVRTTFIEGLNSPFGMALVGKDFYVADTDKLLRFHYEPGAMHIRGEGQQVVELPGGPLNHHWTKNVIASPDGKKLYVTVGSNSNVGENGLNKEQGRAAIWEVDPASGQQRVFASGLRNPNGLAWEPHSGALWTAVNERDEIGSDLVPDYITSVKDGGFYGWPYSYYGQHVDQRVEPQAPQKVAQALMPDYAVGPHTASLGLTFAEPGVLPPPFGQGAFVGQHGSWNRKPHSGYKVIFVPFDATGKPAGKPVDLLTGFLNDEGKAMXXXVGVINDQRGGLLVADDVGNVIWRVSKALEQPCAAKRPVKAPTSKPYAPASSQRKAAPTQSAINC |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2162886007 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 | Metagenome | Rhizosphere |
| 2 | 2511231024 | Pseudomonas sp. GM84 | Isolate | Nodule |
| 3 | 2554235231 | Pseudomonas putida MTCC 5279 | Isolate | Unclassified |
| 4 | 2599185292 | Achromobacter sp. NFACC18-2 | Isolate | Rhizoplane |
| 5 | 2643221569 | Achromobacter sp. Root565 | Isolate | Unclassified |
| 6 | 2643221594 | Achromobacter sp. Root170 | Isolate | Unclassified |
| 7 | 2643221621 | Achromobacter sp. Root83 | Isolate | Unclassified |
| 8 | 2643221660 | Methylibium sp. Root1272 | Isolate | Unclassified |
| 9 | 2643221664 | Massilia sp. Root418 | Isolate | Unclassified |
| 10 | 2738541280 | Massilia sp. GV090 | Isolate | Unclassified |
| 11 | 2738543020 | Pseudomonas sp. GV054 | Isolate | Unclassified |
| 12 | 2738543021 | Pseudomonas sp. GV071 | Isolate | Unclassified |
| 13 | 2765235841 | Pseudomonas putida AA7 | Isolate | Unclassified |
| 14 | 2808606395 | Achromobacter sp. SLBN-14 | Isolate | Unclassified |
| 15 | 2808606418 | Herbaspirillum sp. SJZ107 | Isolate | Rhizosphere |
| 16 | 2811994881 | Pseudomonas sp. SLBN-26 | Isolate | Unclassified |
| 17 | 2857537821 | Achromobacter sp. R-71975 | Isolate | Unclassified |
| 18 | 2858950400 | Achromobacter sp. K91 | Isolate | Unclassified |
| 19 | 2912963787 | Pseudomonas sp. R32 | Isolate | Rhizosphere |
| 20 | 2923519811 | Pseudomonas otitidis SLBN-103 | Isolate | Rhizosphere |
| 21 | 2939651529 | Pseudomonas sp. 2835 | Isolate | Rhizosphere |
| 22 | 2941479691 | |||
| 23 | 2965062239 | Mesorhizobium sp. M1A.F.Ca.ET.072.01.1.1 | Isolate | Nodule |
| 24 | 3007803356 | Pseudomonas sp. CM27 | Isolate | Unclassified |
| 25 | 3300003775 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 | Metagenome | Endosphere |
| 26 | 3300003791 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 | Metagenome | Endosphere |
| 27 | 3300003792 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 | Metagenome | Endosphere |
| 28 | 3300003794 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 | Metagenome | Endosphere |
| 29 | 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) | Metagenome | Rhizosphere |
| 30 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 31 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 32 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 33 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 34 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 35 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 36 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 37 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 38 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 39 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 40 | 3300006946 | Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG | Metagenome | Nodule |
| 41 | 3300009011 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG | Metagenome | Rhizosphere |
| 42 | 3300009036 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG | Metagenome | Rhizosphere |
| 43 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 44 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 45 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 46 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 47 | 3300025292 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 48 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 49 | 3300025299 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 50 | 3300025303 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 51 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 52 | 3300025711 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025728 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025735 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300027111 | Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) | Metagenome | Nodule |
| 62 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 63 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 64 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 65 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 66 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 67 | 3300041404 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 | Metagenome | Rhizosphere |
| 68 | 3300042013 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 | Metagenome | Rhizosphere |
| 69 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 70 | 3300046452 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere | Metagenome | Rhizosphere |
| 71 | 3300046457 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere | Metagenome | Rhizosphere |
| 72 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 73 | 3300046474 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere | Metagenome | Rhizosphere |
| 74 | 3300046491 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere | Metagenome | Rhizosphere |
| 75 | 3300046492 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere | Metagenome | Rhizosphere |
| 76 | 3300046500 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere | Metagenome | Rhizosphere |
| 77 | 3300046501 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere | Metagenome | Rhizosphere |
| 78 | 3300046506 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere | Metagenome | Rhizosphere |
| 79 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 80 | 3300046513 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere | Metagenome | Rhizosphere |
| 81 | 3300046515 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere | Metagenome | Rhizosphere |
| 82 | 3300046519 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere | Metagenome | Rhizosphere |
| 83 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 84 | 3300046524 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere | Metagenome | Rhizosphere |
| 85 | 3300046525 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere | Metagenome | Rhizosphere |
| 86 | 3300046530 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300046538 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300046558 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300046648 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046664 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046665 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046691 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046692 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300047318 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300047320 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300047323 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300047443 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300047447 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300048091 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 106 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 107 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 108 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 109 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 110 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 111 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 112 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 113 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 114 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 115 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 116 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 117 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 118 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 119 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 120 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 121 | 3300049459 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300049460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 124 | 3300053078 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300053104 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere | Metagenome | Endosphere |
| 126 | 3300053108 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere | Metagenome | Endosphere |
| 127 | 3300053125 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere | Metagenome | Endosphere |
| 128 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 129 | 643692032 | Sinorhizobium fredii NGR234 | Isolate | Nodule |
| 130 | 8055878733 | Pseudomonas palmensis BBB001 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 86.49 |
| Metatranscriptomes | 0 |
| Isolates | 13.51 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 9.73 |
| Nodule | 2.7 |
| Rhizoplane | 3.78 |
| Rhizosphere | 58.92 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 24.86 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | SwRhRL2b_contig_2614868 | 2162886007 | Bacteria | 5425 |
| 2 | Ga0055524_1000097 | 3300003775 | Bacteria | 108145 |
| 3 | Ga0055524_1001382 | 3300003775 | Bacteria | 14029 |
| 4 | Ga0055530_10012953 | 3300003791 | Bacteria | 2877 |
| 5 | Ga0055540_1000023 | 3300003792 | Bacteria | 201131 |
| 6 | Ga0055531_10012234 | 3300003794 | Bacteria | 4054 |
| 7 | Ga0065704_10073233 | 3300005289 | Bacteria | 7409 |
| 8 | Ga0065704_10073986 | 3300005289 | Bacteria | 6613 |
| 9 | Ga0070683_100126162 | 3300005329 | Bacteria | 2420 |
| 10 | Ga0070661_100000171 | 3300005344 | Bacteria | 53073 |
| 11 | Ga0070668_100044670 | 3300005347 | Bacteria | 3398 |
| 12 | Ga0070674_100027697 | 3300005356 | Bacteria | 3715 |
| 13 | Ga0070659_100001128 | 3300005366 | Bacteria | 19488 |
| 14 | Ga0070659_100040839 | 3300005366 | Bacteria | 3626 |
| 15 | Ga0070667_100215988 | 3300005367 | Bacteria | 1706 |
| 16 | Ga0070662_100186751 | 3300005457 | Bacteria | 1637 |
| 17 | Ga0068855_100018985 | 3300005563 | Bacteria | 8266 |
| 18 | Ga0070664_100002177 | 3300005564 | Bacteria | 15739 |
| 19 | Ga0068865_100119428 | 3300006881 | Bacteria | 1957 |
| 20 | Ga0079104_1000019 | 3300006946 | Bacteria | 269313 |
| 21 | Ga0105251_10002567 | 3300009011 | Bacteria | 14090 |
| 22 | Ga0105244_10001184 | 3300009036 | Bacteria | 21595 |
| 23 | Ga0105244_10008109 | 3300009036 | Bacteria | 6598 |
| 24 | Ga0105244_10079558 | 3300009036 | Bacteria | 1624 |
| 25 | Ga0105243_10002564 | 3300009148 | Bacteria | 15187 |
| 26 | Ga0157372_10190599 | 3300013307 | Bacteria | 2375 |
| 27 | Ga0157375_10131919 | 3300013308 | Bacteria | 2618 |
| 28 | Ga0163161_10023236 | 3300017792 | Bacteria | 4372 |
| 29 | Ga0209676_1000973 | 3300025292 | Bacteria | 34485 |
| 30 | Ga0209676_1009466 | 3300025292 | Bacteria | 4199 |
| 31 | Ga0209050_1000378 | 3300025298 | Bacteria | 83974 |
| 32 | Ga0209050_1000802 | 3300025298 | Bacteria | 44317 |
| 33 | Ga0209050_1010127 | 3300025298 | Bacteria | 4692 |
| 34 | Ga0209256_1000051 | 3300025299 | Bacteria | 307241 |
| 35 | Ga0209256_1000089 | 3300025299 | Bacteria | 214426 |
| 36 | Ga0209051_1000079 | 3300025303 | Bacteria | 201183 |
| 37 | Ga0209257_1000141 | 3300025304 | Bacteria | 201130 |
| 38 | Ga0207696_1000144 | 3300025711 | Bacteria | 122345 |
| 39 | Ga0207696_1007437 | 3300025711 | Bacteria | 4288 |
| 40 | Ga0207655_1000501 | 3300025728 | Bacteria | 50226 |
| 41 | Ga0207655_1001799 | 3300025728 | Bacteria | 18594 |
| 42 | Ga0207655_1031098 | 3300025728 | Bacteria | 2468 |
| 43 | Ga0207713_1005012 | 3300025735 | Bacteria | 8432 |
| 44 | Ga0207713_1005218 | 3300025735 | Bacteria | 8195 |
| 45 | Ga0207649_10000261 | 3300025920 | Bacteria | 41690 |
| 46 | Ga0207690_10127563 | 3300025932 | Bacteria | 1857 |
| 47 | Ga0207706_10219415 | 3300025933 | Bacteria | 1665 |
| 48 | Ga0207709_10001683 | 3300025935 | Bacteria | 14894 |
| 49 | Ga0207709_10011849 | 3300025935 | Bacteria | 4810 |
| 50 | Ga0207679_10000205 | 3300025945 | Bacteria | 47113 |
| 51 | Ga0207667_10093665 | 3300025949 | Bacteria | 3102 |
| 52 | Ga0209281_1000160 | 3300027111 | Bacteria | 161071 |
| 53 | Ga0265327_10002540 | 3300031251 | Bacteria | 19011 |
| 54 | Ga0307513_10270905 | 3300031456 | Bacteria | 1481 |
| 55 | Ga0307412_10002688 | 3300031911 | Bacteria | 9866 |
| 56 | Ga0307415_100081392 | 3300032126 | Bacteria | 2313 |
| 57 | Ga0373925_0040497 | 3300037068 | Bacteria | 3450 |
| 58 | Ga0439436_0045347 | 3300041404 | Bacteria | 1251 |
| 59 | Ga0439456_000089 | 3300042013 | Bacteria | 31822 |
| 60 | Ga0451577_0006619 | 3300042876 | Bacteria | 11511 |
| 61 | Ga0495617_000305 | 3300046452 | Bacteria | 27697 |
| 62 | Ga0495590_0010576 | 3300046457 | Bacteria | 3462 |
| 63 | Ga0495638_0002282 | 3300046460 | Bacteria | 15847 |
| 64 | Ga0495605_0001457 | 3300046474 | Bacteria | 15459 |
| 65 | Ga0495605_0017514 | 3300046474 | Bacteria | 3853 |
| 66 | Ga0495584_0000592 | 3300046491 | Bacteria | 24414 |
| 67 | Ga0495585_0000500 | 3300046492 | Bacteria | 37095 |
| 68 | Ga0495585_0014912 | 3300046492 | Bacteria | 4519 |
| 69 | Ga0495596_0034251 | 3300046500 | Bacteria | 2017 |
| 70 | Ga0495607_0019907 | 3300046501 | Bacteria | 4252 |
| 71 | Ga0495583_0000004 | 3300046506 | Bacteria | 655287 |
| 72 | Ga0495606_0001158 | 3300046507 | Bacteria | 37308 |
| 73 | Ga0495616_0001914 | 3300046513 | Bacteria | 14016 |
| 74 | Ga0495616_0002891 | 3300046513 | Bacteria | 11212 |
| 75 | Ga0495620_0000003 | 3300046515 | Bacteria | 345923 |
| 76 | Ga0495632_0000186 | 3300046519 | Bacteria | 63352 |
| 77 | Ga0495632_0005873 | 3300046519 | Bacteria | 8016 |
| 78 | Ga0495643_0000319 | 3300046522 | Bacteria | 66471 |
| 79 | Ga0495643_0000569 | 3300046522 | Bacteria | 45560 |
| 80 | Ga0495643_0001974 | 3300046522 | Bacteria | 17209 |
| 81 | Ga0495643_0002637 | 3300046522 | Bacteria | 13917 |
| 82 | Ga0495643_0008410 | 3300046522 | Bacteria | 6536 |
| 83 | Ga0495648_0000117 | 3300046524 | Bacteria | 97341 |
| 84 | Ga0495648_0000676 | 3300046524 | Bacteria | 36436 |
| 85 | Ga0495648_0000860 | 3300046524 | Bacteria | 31968 |
| 86 | Ga0495663_0037171 | 3300046525 | Bacteria | 1468 |
| 87 | Ga0495654_0009973 | 3300046530 | Bacteria | 5188 |
| 88 | Ga0495587_0030993 | 3300046536 | Bacteria | 3241 |
| 89 | Ga0495609_0000964 | 3300046538 | Bacteria | 20666 |
| 90 | Ga0495633_0003938 | 3300046558 | Bacteria | 9667 |
| 91 | Ga0495633_0017327 | 3300046558 | Bacteria | 3686 |
| 92 | Ga0495611_0015296 | 3300046648 | Bacteria | 3279 |
| 93 | Ga0495625_0002646 | 3300046660 | Bacteria | 19101 |
| 94 | Ga0495659_0000015 | 3300046664 | Bacteria | 76146 |
| 95 | Ga0495659_0000878 | 3300046664 | Bacteria | 10678 |
| 96 | Ga0495661_0021461 | 3300046665 | Bacteria | 4210 |
| 97 | Ga0495661_0024256 | 3300046665 | Bacteria | 3928 |
| 98 | Ga0495670_0004023 | 3300046691 | Bacteria | 7208 |
| 99 | Ga0495670_0004168 | 3300046691 | Bacteria | 7082 |
| 100 | Ga0495670_0037769 | 3300046691 | Bacteria | 2407 |
| 101 | Ga0495671_0000359 | 3300046692 | Bacteria | 37925 |
| 102 | Ga0495671_0002959 | 3300046692 | Bacteria | 10563 |
| 103 | Ga0495671_0035049 | 3300046692 | Bacteria | 2550 |
| 104 | Ga0495649_0001815 | 3300046694 | Bacteria | 15676 |
| 105 | Ga0495649_0031258 | 3300046694 | Bacteria | 2936 |
| 106 | Ga0495636_0000301 | 3300047318 | Bacteria | 19415 |
| 107 | Ga0495672_0000035 | 3300047320 | Bacteria | 290329 |
| 108 | Ga0495672_0025625 | 3300047320 | Bacteria | 3770 |
| 109 | Ga0495672_0026942 | 3300047320 | Bacteria | 3659 |
| 110 | Ga0495680_0150734 | 3300047322 | Bacteria | 1695 |
| 111 | Ga0495683_0000344 | 3300047323 | Bacteria | 38540 |
| 112 | Ga0495683_0003366 | 3300047323 | Bacteria | 9342 |
| 113 | Ga0495687_000536 | 3300047443 | Bacteria | 45378 |
| 114 | Ga0495685_000004 | 3300047447 | Bacteria | 115775 |
| 115 | Ga0495602_0001476 | 3300048088 | Bacteria | 23369 |
| 116 | Ga0495626_0023071 | 3300048091 | Bacteria | 3067 |
| 117 | Ga0496103_0007960 | 3300048906 | Bacteria | 6298 |
| 118 | Ga0496104_0251552 | 3300048907 | Bacteria | 1680 |
| 119 | Ga0496108_0201119 | 3300048911 | Bacteria | 1729 |
| 120 | Ga0496110_0022963 | 3300048913 | Bacteria | 5302 |
| 121 | Ga0496114_0000502 | 3300048917 | Bacteria | 28617 |
| 122 | Ga0496114_0004116 | 3300048917 | Bacteria | 11251 |
| 123 | Ga0496116_0057317 | 3300048919 | Bacteria | 2548 |
| 124 | Ga0496117_0001008 | 3300048920 | Bacteria | 43122 |
| 125 | Ga0496117_0002244 | 3300048920 | Bacteria | 24928 |
| 126 | Ga0496117_0008345 | 3300048920 | Bacteria | 9848 |
| 127 | Ga0496117_0010630 | 3300048920 | Bacteria | 8348 |
| 128 | Ga0496118_0003309 | 3300048921 | Bacteria | 20446 |
| 129 | Ga0496118_0010322 | 3300048921 | Bacteria | 9261 |
| 130 | Ga0496118_0018360 | 3300048921 | Bacteria | 6314 |
| 131 | Ga0496118_0038574 | 3300048921 | Bacteria | 3826 |
| 132 | Ga0496119_0009144 | 3300048922 | Bacteria | 8565 |
| 133 | Ga0496119_0074583 | 3300048922 | Bacteria | 1975 |
| 134 | Ga0496120_0002825 | 3300048923 | Bacteria | 16748 |
| 135 | Ga0496121_0001092 | 3300048924 | Bacteria | 47942 |
| 136 | Ga0496121_0117301 | 3300048924 | Bacteria | 2017 |
| 137 | Ga0496122_0004088 | 3300048925 | Bacteria | 18485 |
| 138 | Ga0496122_0052557 | 3300048925 | Bacteria | 3082 |
| 139 | Ga0496123_0016580 | 3300048926 | Bacteria | 5972 |
| 140 | Ga0496123_0017626 | 3300048926 | Bacteria | 5733 |
| 141 | Ga0496123_0035674 | 3300048926 | Bacteria | 3540 |
| 142 | Ga0496124_0001100 | 3300048927 | Bacteria | 42478 |
| 143 | Ga0496124_0010243 | 3300048927 | Bacteria | 9520 |
| 144 | Ga0496124_0042687 | 3300048927 | Bacteria | 3903 |
| 145 | Ga0496124_0043979 | 3300048927 | Bacteria | 3836 |
| 146 | Ga0496124_0050049 | 3300048927 | Bacteria | 3562 |
| 147 | Ga0496125_0000768 | 3300048928 | Bacteria | 52483 |
| 148 | Ga0496125_0002991 | 3300048928 | Bacteria | 21184 |
| 149 | Ga0496125_0027113 | 3300048928 | Bacteria | 5200 |
| 150 | Ga0496126_0010539 | 3300048929 | Bacteria | 9679 |
| 151 | Ga0496126_0029684 | 3300048929 | Bacteria | 5191 |
| 152 | Ga0495678_001788 | 3300049459 | Bacteria | 15897 |
| 153 | Ga0495682_0001222 | 3300049460 | Bacteria | 14572 |
| 154 | Ga0495682_0001240 | 3300049460 | Bacteria | 14428 |
| 155 | Ga0501044_0069988 | 3300049823 | Bacteria | 3571 |
| 156 | Ga0495612_0006928 | 3300053078 | Bacteria | 4637 |
| 157 | Ga0500556_0000117 | 3300053104 | Bacteria | 69237 |
| 158 | Ga0500562_036334 | 3300053108 | Bacteria | 1306 |
| 159 | Ga0500618_000473 | 3300053125 | Bacteria | 26049 |
| 160 | Ga0500559_0000003 | 3300053136 | Bacteria | 252693 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300042876 | Ga0451577_0006619 | Ga0451577_0006619_6493_7638 | 370 |
| 2 | 3300041404 | Ga0439436_0045347 | Ga0439436_0045347_99_1226 | 374 |
| 3 | 3300053108 | Ga0500562_036334 | Ga0500562_036334_41_1264 | 393 |
| 4 | 3300046522 | Ga0495643_0000569 | Ga0495643_0000569_38073_39431 | 399 |
| 5 | 3300048091 | Ga0495626_0023071 | Ga0495626_0023071_801_2168 | 399 |
| 6 | 3300046501 | Ga0495607_0019907 | Ga0495607_0019907_1761_3128 | 400 |
| 7 | 3300046665 | Ga0495661_0021461 | Ga0495661_0021461_1460_2827 | 400 |
| 8 | 3300046519 | Ga0495632_0005873 | Ga0495632_0005873_1117_2460 | 405 |
| 9 | 3300046452 | Ga0495617_000305 | Ga0495617_000305_7694_9010 | 407 |
| 10 | 3300046492 | Ga0495585_0000500 | Ga0495585_0000500_28511_29827 | 407 |
| 11 | 3300046513 | Ga0495616_0001914 | Ga0495616_0001914_5506_6822 | 407 |
| 12 | 3300046524 | Ga0495648_0000117 | Ga0495648_0000117_9139_10455 | 407 |
| 13 | 3300046525 | Ga0495663_0037171 | Ga0495663_0037171_203_1438 | 409 |
| 14 | 3300046491 | Ga0495584_0000592 | Ga0495584_0000592_16214_17527 | 417 |
| 15 | 3300046492 | Ga0495585_0014912 | Ga0495585_0014912_1613_2926 | 417 |
| 16 | 3300046500 | Ga0495596_0034251 | Ga0495596_0034251_53_1366 | 417 |
| 17 | 3300046513 | Ga0495616_0002891 | Ga0495616_0002891_3037_4350 | 417 |
| 18 | 3300046558 | Ga0495633_0003938 | Ga0495633_0003938_6761_8074 | 417 |
| 19 | 3300047323 | Ga0495683_0000344 | Ga0495683_0000344_1501_2814 | 417 |
| 20 | 3300046691 | Ga0495670_0004168 | Ga0495670_0004168_2849_4162 | 418 |
| 21 | 3300025292 | Ga0209676_1000973 | Ga0209676_10009731 | 420 |
| 22 | 3300047322 | Ga0495680_0150734 | Ga0495680_0150734_17_1300 | 421 |
| 23 | 3300003775 | Ga0055524_1001382 | Ga0055524_10013826 | 422 |
| 24 | 3300025299 | Ga0209256_1000089 | Ga0209256_100008989 | 422 |
| 25 | 3300048929 | Ga0496126_0029684 | Ga0496126_0029684_2631_3932 | 422 |
| 26 | 3300005329 | Ga0070683_100126162 | Ga0070683_1001261622 | 423 |
| 27 | 3300046522 | Ga0495643_0001974 | Ga0495643_0001974_3198_4508 | 423 |
| 28 | 3300005289 | Ga0065704_10073986 | Ga0065704_100739866 | 424 |
| 29 | 3300005366 | Ga0070659_100040839 | Ga0070659_1000408393 | 424 |
| 30 | 3300005563 | Ga0068855_100018985 | Ga0068855_1000189857 | 424 |
| 31 | 3300009148 | Ga0105243_10002564 | Ga0105243_100025644 | 424 |
| 32 | 3300013307 | Ga0157372_10190599 | Ga0157372_101905992 | 424 |
| 33 | 3300017792 | Ga0163161_10023236 | Ga0163161_100232364 | 424 |
| 34 | 3300025935 | Ga0207709_10001683 | Ga0207709_1000168314 | 424 |
| 35 | 3300025949 | Ga0207667_10093665 | Ga0207667_100936653 | 424 |
| 36 | 3300046515 | Ga0495620_0000003 | Ga0495620_0000003_229195_230511 | 424 |
| 37 | 3300046519 | Ga0495632_0000186 | Ga0495632_0000186_56823_58139 | 424 |
| 38 | 3300046522 | Ga0495643_0000319 | Ga0495643_0000319_24081_25397 | 424 |
| 39 | 3300046524 | Ga0495648_0000676 | Ga0495648_0000676_10104_11420 | 424 |
| 40 | 3300046694 | Ga0495649_0031258 | Ga0495649_0031258_170_1480 | 424 |
| 41 | 3300048919 | Ga0496116_0057317 | Ga0496116_0057317_574_1920 | 424 |
| 42 | 3300048920 | Ga0496117_0001008 | Ga0496117_0001008_36820_38166 | 424 |
| 43 | 3300037068 | Ga0373925_0040497 | Ga0373925_0040497_2034_3347 | 425 |
| 44 | 3300031251 | Ga0265327_10002540 | Ga0265327_100025407 | 426 |
| 45 | 3300046530 | Ga0495654_0009973 | Ga0495654_0009973_814_2154 | 426 |
| 46 | 3300046664 | Ga0495659_0000015 | Ga0495659_0000015_7578_8918 | 426 |
| 47 | 3300046692 | Ga0495671_0000359 | Ga0495671_0000359_29509_30849 | 426 |
| 48 | 3300047320 | Ga0495672_0000035 | Ga0495672_0000035_111651_112991 | 426 |
| 49 | 3300048913 | Ga0496110_0022963 | Ga0496110_0022963_1271_2584 | 426 |
| 50 | 3300009011 | Ga0105251_10002567 | Ga0105251_1000256710 | 427 |
| 51 | 3300025711 | Ga0207696_1007437 | Ga0207696_10074372 | 427 |
| 52 | 3300025735 | Ga0207713_1005218 | Ga0207713_10052183 | 427 |
| 53 | 3300048925 | Ga0496122_0052557 | Ga0496122_0052557_568_1884 | 427 |
| 54 | 3300048926 | Ga0496123_0035674 | Ga0496123_0035674_2165_3481 | 427 |
| 55 | 3300048927 | Ga0496124_0001100 | Ga0496124_0001100_36352_37668 | 427 |
| 56 | iso_pu_bacteria | 2808606418 | 2809144020 | 427 |
| 57 | 3300046522 | Ga0495643_0002637 | Ga0495643_0002637_548_1858 | 429 |
| 58 | 3300046665 | Ga0495661_0024256 | Ga0495661_0024256_2084_3385 | 429 |
| 59 | iso_pu_bacteria | 2811994881 | 2812369844 | 429 |
| 60 | iso_pu_bacteria | 2923519811 | 2923523930 | 429 |
| 61 | iso_pu_bacteria | 2738543020 | 2739285921 | 431 |
| 62 | iso_pu_bacteria | 2738543021 | 2739291234 | 431 |
| 63 | 3300032126 | Ga0307415_100081392 | Ga0307415_1000813921 | 432 |
| 64 | 3300046536 | Ga0495587_0030993 | Ga0495587_0030993_278_1609 | 432 |
| 65 | 3300048906 | Ga0496103_0007960 | Ga0496103_0007960_25_1335 | 432 |
| 66 | 3300053078 | Ga0495612_0006928 | Ga0495612_0006928_2591_3922 | 432 |
| 67 | 3300053104 | Ga0500556_0000117 | Ga0500556_0000117_42252_43592 | 432 |
| 68 | 3300053125 | Ga0500618_000473 | Ga0500618_000473_16178_17521 | 432 |
| 69 | iso_pu_bacteria | 2554235231 | 2555249252 | 432 |
| 70 | 3300005344 | Ga0070661_100000171 | Ga0070661_10000017155 | 433 |
| 71 | 3300005347 | Ga0070668_100044670 | Ga0070668_1000446702 | 433 |
| 72 | 3300005356 | Ga0070674_100027697 | Ga0070674_1000276972 | 433 |
| 73 | 3300005366 | Ga0070659_100001128 | Ga0070659_10000112820 | 433 |
| 74 | 3300005367 | Ga0070667_100215988 | Ga0070667_1002159882 | 433 |
| 75 | 3300005457 | Ga0070662_100186751 | Ga0070662_1001867511 | 433 |
| 76 | 3300005564 | Ga0070664_100002177 | Ga0070664_10000217716 | 433 |
| 77 | 3300013308 | Ga0157375_10131919 | Ga0157375_101319191 | 433 |
| 78 | 3300025920 | Ga0207649_10000261 | Ga0207649_1000026120 | 433 |
| 79 | 3300025932 | Ga0207690_10127563 | Ga0207690_101275632 | 433 |
| 80 | 3300025933 | Ga0207706_10219415 | Ga0207706_102194151 | 433 |
| 81 | 3300025945 | Ga0207679_10000205 | Ga0207679_1000020534 | 433 |
| 82 | 3300046691 | Ga0495670_0037769 | Ga0495670_0037769_276_1586 | 433 |
| 83 | 3300048088 | Ga0495602_0001476 | Ga0495602_0001476_14971_16278 | 433 |
| 84 | iso_pu_bacteria | 2599185292 | 2599907291 | 433 |
| 85 | iso_pu_bacteria | 2643221569 | 2643863962 | 433 |
| 86 | iso_pu_bacteria | 2643221594 | 2643982524 | 433 |
| 87 | iso_pu_bacteria | 2643221621 | 2644121467 | 433 |
| 88 | iso_pu_bacteria | 2808606395 | 2809034634 | 433 |
| 89 | iso_pu_bacteria | 2857537821 | 2857541798 | 433 |
| 90 | iso_pu_bacteria | 2858950400 | 2858953751 | 433 |
| 91 | iso_pu_bacteria | 2941479691 | 2941480373 | 433 |
| 92 | 3300003775 | Ga0055524_1000097 | Ga0055524_100009760 | 434 |
| 93 | 3300003791 | Ga0055530_10012953 | Ga0055530_100129531 | 434 |
| 94 | 3300003792 | Ga0055540_1000023 | Ga0055540_1000023148 | 434 |
| 95 | 3300003794 | Ga0055531_10012234 | Ga0055531_100122345 | 434 |
| 96 | 3300006881 | Ga0068865_100119428 | Ga0068865_1001194282 | 434 |
| 97 | 3300006946 | Ga0079104_1000019 | Ga0079104_100001938 | 434 |
| 98 | 3300025298 | Ga0209050_1000378 | Ga0209050_100037838 | 434 |
| 99 | 3300025298 | Ga0209050_1010127 | Ga0209050_10101272 | 434 |
| 100 | 3300025299 | Ga0209256_1000051 | Ga0209256_100005139 | 434 |
| 101 | 3300025303 | Ga0209051_1000079 | Ga0209051_100007939 | 434 |
| 102 | 3300025304 | Ga0209257_1000141 | Ga0209257_1000141185 | 434 |
| 103 | 3300027111 | Ga0209281_1000160 | Ga0209281_100016038 | 434 |
| 104 | 3300046558 | Ga0495633_0017327 | Ga0495633_0017327_1342_2655 | 434 |
| 105 | 3300048907 | Ga0496104_0251552 | Ga0496104_0251552_338_1654 | 434 |
| 106 | 3300048917 | Ga0496114_0000502 | Ga0496114_0000502_7713_9068 | 434 |
| 107 | iso_pu_bacteria | 2511231024 | 2511374182 | 434 |
| 108 | iso_pu_bacteria | 2765235841 | 2765585517 | 434 |
| 109 | iso_pu_bacteria | 2912963787 | 2912967756 | 434 |
| 110 | iso_pu_bacteria | 2939651529 | 2939655790 | 434 |
| 111 | iso_pu_bacteria | 2965062239 | 2965070118 | 434 |
| 112 | iso_pu_bacteria | 3007803356 | 3007803792 | 434 |
| 113 | iso_pu_bacteria | 643692032 | 643826144 | 434 |
| 114 | iso_pu_bacteria | 8055878733 | 8055881309 | 434 |
| 115 | 3300009036 | Ga0105244_10001184 | Ga0105244_1000118419 | 435 |
| 116 | 3300009036 | Ga0105244_10008109 | Ga0105244_100081095 | 435 |
| 117 | 3300025728 | Ga0207655_1000501 | Ga0207655_100050141 | 435 |
| 118 | 3300025728 | Ga0207655_1001799 | Ga0207655_100179916 | 435 |
| 119 | 3300046474 | Ga0495605_0017514 | Ga0495605_0017514_14_1366 | 435 |
| 120 | 3300046507 | Ga0495606_0001158 | Ga0495606_0001158_11105_12415 | 435 |
| 121 | 3300046692 | Ga0495671_0035049 | Ga0495671_0035049_633_1943 | 435 |
| 122 | 3300046694 | Ga0495649_0001815 | Ga0495649_0001815_12985_14295 | 435 |
| 123 | 3300047320 | Ga0495672_0025625 | Ga0495672_0025625_145_1497 | 435 |
| 124 | 3300048920 | Ga0496117_0010630 | Ga0496117_0010630_201_1514 | 435 |
| 125 | 3300048921 | Ga0496118_0038574 | Ga0496118_0038574_497_1810 | 435 |
| 126 | 3300048924 | Ga0496121_0117301 | Ga0496121_0117301_628_1992 | 435 |
| 127 | 3300048927 | Ga0496124_0010243 | Ga0496124_0010243_407_1771 | 435 |
| 128 | 3300048927 | Ga0496124_0043979 | Ga0496124_0043979_2279_3589 | 435 |
| 129 | 3300048928 | Ga0496125_0027113 | Ga0496125_0027113_261_1625 | 435 |
| 130 | 3300025292 | Ga0209676_1009466 | Ga0209676_10094663 | 436 |
| 131 | 3300025298 | Ga0209050_1000802 | Ga0209050_10008024 | 436 |
| 132 | 3300031911 | Ga0307412_10002688 | Ga0307412_100026887 | 436 |
| 133 | 3300048911 | Ga0496108_0201119 | Ga0496108_0201119_256_1578 | 436 |
| 134 | 3300048921 | Ga0496118_0018360 | Ga0496118_0018360_413_1729 | 436 |
| 135 | 3300048922 | Ga0496119_0009144 | Ga0496119_0009144_5796_7112 | 436 |
| 136 | 3300048923 | Ga0496120_0002825 | Ga0496120_0002825_5670_6986 | 436 |
| 137 | 3300048924 | Ga0496121_0001092 | Ga0496121_0001092_18542_19858 | 436 |
| 138 | 3300048926 | Ga0496123_0017626 | Ga0496123_0017626_100_1416 | 436 |
| 139 | 3300048927 | Ga0496124_0050049 | Ga0496124_0050049_235_1551 | 436 |
| 140 | 3300048928 | Ga0496125_0000768 | Ga0496125_0000768_14036_15352 | 436 |
| 141 | 3300048929 | Ga0496126_0010539 | Ga0496126_0010539_679_1995 | 436 |
| 142 | iso_pu_bacteria | 2643221664 | 2644359463 | 436 |
| 143 | 3300031456 | Ga0307513_10270905 | Ga0307513_102709051 | 437 |
| 144 | 3300046457 | Ga0495590_0010576 | Ga0495590_0010576_388_1752 | 437 |
| 145 | 3300046460 | Ga0495638_0002282 | Ga0495638_0002282_7146_8510 | 437 |
| 146 | 3300046474 | Ga0495605_0001457 | Ga0495605_0001457_4881_6245 | 437 |
| 147 | 3300046506 | Ga0495583_0000004 | Ga0495583_0000004_410891_412255 | 437 |
| 148 | 3300046524 | Ga0495648_0000860 | Ga0495648_0000860_7180_8544 | 437 |
| 149 | 3300046538 | Ga0495609_0000964 | Ga0495609_0000964_16687_18051 | 437 |
| 150 | 3300046648 | Ga0495611_0015296 | Ga0495611_0015296_1666_3030 | 437 |
| 151 | 3300046660 | Ga0495625_0002646 | Ga0495625_0002646_14016_15380 | 437 |
| 152 | 3300046664 | Ga0495659_0000878 | Ga0495659_0000878_6132_7496 | 437 |
| 153 | 3300046691 | Ga0495670_0004023 | Ga0495670_0004023_4538_5902 | 437 |
| 154 | 3300046692 | Ga0495671_0002959 | Ga0495671_0002959_2042_3406 | 437 |
| 155 | 3300047318 | Ga0495636_0000301 | Ga0495636_0000301_11984_13348 | 437 |
| 156 | 3300047320 | Ga0495672_0026942 | Ga0495672_0026942_745_2109 | 437 |
| 157 | 3300047323 | Ga0495683_0003366 | Ga0495683_0003366_1719_3083 | 437 |
| 158 | 3300047443 | Ga0495687_000536 | Ga0495687_000536_28999_30363 | 437 |
| 159 | 3300047447 | Ga0495685_000004 | Ga0495685_000004_99856_101220 | 437 |
| 160 | 3300049459 | Ga0495678_001788 | Ga0495678_001788_7060_8424 | 437 |
| 161 | 3300049460 | Ga0495682_0001222 | Ga0495682_0001222_7517_8881 | 437 |
| 162 | 3300049460 | Ga0495682_0001240 | Ga0495682_0001240_5688_7052 | 437 |
| 163 | 3300049823 | Ga0501044_0069988 | Ga0501044_0069988_1893_3278 | 437 |
| 164 | 3300053136 | Ga0500559_0000003 | Ga0500559_0000003_6376_7725 | 437 |
| 165 | iso_pu_bacteria | 2643221660 | 2644340628 | 437 |
| 166 | iso_pu_bacteria | 2738541280 | 2738740788 | 437 |
| 167 | 2162886007 | SwRhRL2b_contig_2614868 | SwRhRL2b_0046.00002820 | 438 |
| 168 | 3300005289 | Ga0065704_10073233 | Ga0065704_100732331 | 438 |
| 169 | 3300009036 | Ga0105244_10079558 | Ga0105244_100795581 | 438 |
| 170 | 3300025711 | Ga0207696_1000144 | Ga0207696_100014437 | 438 |
| 171 | 3300025728 | Ga0207655_1031098 | Ga0207655_10310982 | 438 |
| 172 | 3300025735 | Ga0207713_1005012 | Ga0207713_10050122 | 438 |
| 173 | 3300025935 | Ga0207709_10011849 | Ga0207709_100118493 | 438 |
| 174 | 3300042013 | Ga0439456_000089 | Ga0439456_000089_24728_26044 | 438 |
| 175 | 3300046522 | Ga0495643_0008410 | Ga0495643_0008410_112_1596 | 438 |
| 176 | 3300048917 | Ga0496114_0004116 | Ga0496114_0004116_7625_8941 | 438 |
| 177 | 3300048920 | Ga0496117_0002244 | Ga0496117_0002244_5437_6861 | 438 |
| 178 | 3300048920 | Ga0496117_0008345 | Ga0496117_0008345_639_2012 | 438 |
| 179 | 3300048921 | Ga0496118_0003309 | Ga0496118_0003309_14431_15855 | 438 |
| 180 | 3300048921 | Ga0496118_0010322 | Ga0496118_0010322_153_1526 | 438 |
| 181 | 3300048922 | Ga0496119_0074583 | Ga0496119_0074583_496_1812 | 438 |
| 182 | 3300048925 | Ga0496122_0004088 | Ga0496122_0004088_16839_18212 | 438 |
| 183 | 3300048926 | Ga0496123_0016580 | Ga0496123_0016580_3921_5294 | 438 |
| 184 | 3300048927 | Ga0496124_0042687 | Ga0496124_0042687_1861_3177 | 438 |
| 185 | 3300048928 | Ga0496125_0002991 | Ga0496125_0002991_5234_6658 | 438 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 6jwf-assembly1.cif.gz_A | holo form of pyranose dehydrogenase pqq domain from coprinopsis cinerea | 0.759 | 50 | 432 |
| 6i1q-assembly1.cif.gz_A | iodide structure of trichoderma reesei carbohydrate-active enzymes family aa12 | 0.7359 | 41 | 434 |
| 7cdy-assembly2.cif.gz_B | crystal structure of glucose dehydrogenase | 0.7341 | 69 | 435 |
| 7cgz-assembly1.cif.gz_B | glucose dehydrogenase | 0.7322 | 69 | 435 |
| 6i1t-assembly1.cif.gz_A | calcium structure of trichoderma reesei carbohydrate-active enzymes family aa12 | 0.7309 | 41 | 434 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_A0A0R4IBY0_470_547_2.40.10.480 | Mainly Beta;Beta Barrel;Thrombin, subunit H; | 0.7332 | 159 | 252 | 2.40.10.480 |
| af_P98163_727_1026_2.120.10.30 | Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain | 0.7321 | 76 | 294 | 2.120.10.30 |
| 3s8zA01 | Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain | 0.7319 | 72 | 394 | 2.120.10.30 |
| af_Q8K450_481_639_2.120.10.30 | Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain | 0.7314 | 71 | 279 | 2.120.10.30 |
| 3a9gA00 | Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain | 0.7285 | 65 | 433 | 2.120.10.30 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A3M5BH66-F1-model_v4 | L-sorbosone dehydrogenase | 0.9696 | 127 | 435 |
|
| AF-A0A136QLG4-F1-model_v4 | deleted | 0.9678 | 217 | 435 |
|
| AF-A0A5E7E3X4-F1-model_v4 | Glucose/Sorbosone dehydrogenase domain-containing protein | 0.9628 | 1 | 435 |
|
| AF-A0A2R7SZ97-F1-model_v4 | deleted | 0.9627 | 149 | 435 |
|
| AF-A0A528NVY6-F1-model_v4 | deleted | 0.9614 | 290 | 408 |
|
Predicted Structure (AlphaFold2)
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