F284158

General Info

Members Datasets Scaffolds Average Seq Length
185 147 370 587

Family's Representative Sequence

Representative Sequence 3300006844|Ga0075428_100076153|Ga0075428_1000761532
Length 716
Sequence MKRILVVLATLLAIPIAADEVAKLHSLFDRTWELQLKNRPLFATSVGRHEYDHLLPSVTPKDLERMHAEAKAALAELLAIDRAKLPPAEVVNYDMFRQFTEDDIAGYELGDYQIPFNADSGFHTDFSRLAKEVPLGSTKDYENYIARLRAWPRYVREQIALMRVGLERGMTVPHATLDGYDRTMAAHVVDDATKSVFWEPFVSFPASVPASEHERLRREGRAAVGEGAIAGYRELLAFFQKEYLPGARTTLGASELPNGRAYYAQKIREFTTLDLKPDEIHKIGLAEVDRISAEMNAVMKQVGFQGDFAAFLRFLRTDPRFYAKTPEELLSRASRIAKRIDGKLPSLFKTLPRLPYTVEPVPPDIAPKYTTGRYVGAPEGSTQPGIYWVNTYKLEARPLYNLEALTLHEAVPGHHLQIALSRELANLPNFRRFSYISAFGEGWGLYSEWLGLEAGFYTDPYDNFGRLTYEMWRACRLVVDTGLHAMGWTRQQAIDYMATRTALPLHEVGTEVDRYISWPGQALAYKLGELKIKELRKRAEQALGTRFDVREFHDVVLGAGSIPLRVLEGNVDAWIAKQGHPPAASAEGAIRGALQEWVEANNRGDQEAAAAIWSTNVIGWFPRYAAFTPETGAQIAGAASAAGRSLYDLTIDEIIVSGDHAVVRDTWHETRHFQSGPAATRLIRSFEVWKRHDDGKWRIIRWISAPEQWEVARATR

Samples

Sample ID Description Type Environment
1 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
2 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
10 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
17 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
18 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
19 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
20 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
21 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
22 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
23 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
24 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
25 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
26 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
29 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
30 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
31 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
32 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
33 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
34 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
35 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
36 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
37 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
38 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
39 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
40 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
41 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
45 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
46 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
48 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
49 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
50 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
51 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
52 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
53 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
54 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
55 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
56 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
57 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
58 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
59 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
94 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
98 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
99 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
100 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
101 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
102 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
103 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
104 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
105 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
106 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
107 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
108 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
109 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
110 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
111 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
112 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
113 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
114 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
115 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
116 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
117 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
118 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
119 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
120 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
121 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
122 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
123 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
124 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
125 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
126 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
127 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
128 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
129 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
130 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
131 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
132 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
133 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
134 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
135 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
136 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
137 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
138 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
139 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
141 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
142 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
143 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
144 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
145 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
146 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
147 2643221598 Phenylobacterium sp. Root700 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.46
Metatranscriptomes 0
Isolates 0.54

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.54
Nodule 0
Rhizoplane 2.7
Rhizosphere 90.27
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075428_100076153 3300006844 Bacteria 3663
2 Ga0065707_10087160 3300005295 Bacteria 5138
3 Ga0070683_100000284 3300005329 Bacteria 34793
4 Ga0070670_100000083 3300005331 Bacteria 91017
5 Ga0068869_100005019 3300005334 Bacteria 8289
6 Ga0070666_10001256 3300005335 Bacteria 15335
7 Ga0070666_10006576 3300005335 Bacteria 7143
8 Ga0068868_100000480 3300005338 Bacteria 26510
9 Ga0070689_100026779 3300005340 Bacteria 4343
10 Ga0070687_100007211 3300005343 Bacteria 4614
11 Ga0070692_10002878 3300005345 Bacteria 6825
12 Ga0070668_100026325 3300005347 Bacteria 4413
13 Ga0070669_100000032 3300005353 Bacteria 153549
14 Ga0070675_100000011 3300005354 Bacteria 242011
15 Ga0070673_100042682 3300005364 Bacteria 3498
16 Ga0070667_100001037 3300005367 Bacteria 25394
17 Ga0070667_100023866 3300005367 Bacteria 5079
18 Ga0070709_10000026 3300005434 Bacteria 129061
19 Ga0070713_100006087 3300005436 Bacteria 8318
20 Ga0070701_10004652 3300005438 Bacteria 5586
21 Ga0070700_100000297 3300005441 Bacteria 25999
22 Ga0070663_100030430 3300005455 Bacteria 3700
23 Ga0070706_100023968 3300005467 Bacteria 5619
24 Ga0070706_100024409 3300005467 Bacteria 5565
25 Ga0070707_100038219 3300005468 Bacteria 4584
26 Ga0070707_100089694 3300005468 Bacteria 2975
27 Ga0070698_100000968 3300005471 Bacteria 31507
28 Ga0070684_100000776 3300005535 Bacteria 22143
29 Ga0070697_100001286 3300005536 Bacteria 18901
30 Ga0070672_100002652 3300005543 Bacteria 11423
31 Ga0070672_100010081 3300005543 Bacteria 6542
32 Ga0070672_100065806 3300005543 Bacteria 2868
33 Ga0070665_100000545 3300005548 Bacteria 52826
34 Ga0070665_100000946 3300005548 Bacteria 37035
35 Ga0070664_100023315 3300005564 Bacteria 5111
36 Ga0068854_100000784 3300005578 Bacteria 18886
37 Ga0068856_100002060 3300005614 Bacteria 20853
38 Ga0070702_100015807 3300005615 Bacteria 3860
39 Ga0068861_100054080 3300005719 Bacteria 3057
40 Ga0068870_10000869 3300005840 Bacteria 11795
41 Ga0068870_10039656 3300005840 Bacteria 2438
42 Ga0068863_100034368 3300005841 Bacteria 4830
43 Ga0068858_100024422 3300005842 Bacteria 5631
44 Ga0068860_100022204 3300005843 Bacteria 6143
45 Ga0070717_10000178 3300006028 Bacteria 47630
46 Ga0075428_100046273 3300006844 Bacteria 4779
47 Ga0075428_100046739 3300006844 Bacteria 4754
48 Ga0075431_100007112 3300006847 Bacteria 11118
49 Ga0075431_100035221 3300006847 Bacteria 5154
50 Ga0068865_100021704 3300006881 Bacteria 4179
51 Ga0068865_100028491 3300006881 Bacteria 3698
52 Ga0075436_100004767 3300006914 Bacteria 9314
53 Ga0075435_100000366 3300007076 Bacteria 27638
54 Ga0105240_10008723 3300009093 Bacteria 14454
55 Ga0105240_10017381 3300009093 Bacteria 9696
56 Ga0111539_10002328 3300009094 Bacteria 25290
57 Ga0111539_10003121 3300009094 Bacteria 21945
58 Ga0111539_10112467 3300009094 Bacteria 3194
59 Ga0105245_10000043 3300009098 Bacteria 136604
60 Ga0105247_10025587 3300009101 Bacteria 3561
61 Ga0114129_10360729 3300009147 Bacteria 1923
62 Ga0105248_10146226 3300009177 Bacteria 2667
63 Ga0105238_10000008 3300009551 Bacteria 307196
64 Ga0105249_10071468 3300009553 Bacteria 3206
65 Ga0157369_10000880 3300013105 Bacteria 38282
66 Ga0157378_10018215 3300013297 Bacteria 6165
67 Ga0157375_10000377 3300013308 Bacteria 40648
68 Ga0157375_10000514 3300013308 Bacteria 34866
69 Ga0157375_10013706 3300013308 Bacteria 7227
70 Ga0157375_10035862 3300013308 Bacteria 4739
71 Ga0163163_10013255 3300014325 Bacteria 7540
72 Ga0163163_10166064 3300014325 Bacteria 2253
73 Ga0157380_10002496 3300014326 Bacteria 12397
74 Ga0157377_10000011 3300014745 Bacteria 305350
75 Ga0157377_10000216 3300014745 Bacteria 30887
76 Ga0157379_10023522 3300014968 Bacteria 5469
77 Ga0157376_10000009 3300014969 Bacteria 340244
78 Ga0157376_10002986 3300014969 Bacteria 11597
79 Ga0213876_10000018 3300021384 Bacteria 282299
80 Ga0207682_10003583 3300025893 Bacteria 6712
81 Ga0207680_10002709 3300025903 Bacteria 8278
82 Ga0207680_10003882 3300025903 Bacteria 7050
83 Ga0207699_10000039 3300025906 Bacteria 123391
84 Ga0207645_10019476 3300025907 Bacteria 4448
85 Ga0207643_10012374 3300025908 Bacteria 4612
86 Ga0207705_10026477 3300025909 Bacteria 4136
87 Ga0207684_10003334 3300025910 Bacteria 15758
88 Ga0207695_10010320 3300025913 Bacteria 11435
89 Ga0207695_10016591 3300025913 Bacteria 8607
90 Ga0207660_10008754 3300025917 Bacteria 6542
91 Ga0207662_10002709 3300025918 Bacteria 8939
92 Ga0207662_10003415 3300025918 Bacteria 8173
93 Ga0207646_10020081 3300025922 Bacteria 6196
94 Ga0207646_10091782 3300025922 Bacteria 2718
95 Ga0207681_10000052 3300025923 Bacteria 112273
96 Ga0207694_10000001 3300025924 Bacteria 4078485
97 Ga0207650_10000108 3300025925 Bacteria 109507
98 Ga0207659_10000003 3300025926 Bacteria 523949
99 Ga0207687_10000024 3300025927 Bacteria 187490
100 Ga0207700_10017463 3300025928 Bacteria 4794
101 Ga0207670_10036478 3300025936 Bacteria 3197
102 Ga0207691_10005376 3300025940 Bacteria 12365
103 Ga0207691_10023727 3300025940 Bacteria 5774
104 Ga0207711_10068023 3300025941 Bacteria 3084
105 Ga0207711_10086424 3300025941 Bacteria 2750
106 Ga0207689_10019819 3300025942 Bacteria 5666
107 Ga0207661_10000013 3300025944 Bacteria 348811
108 Ga0207679_10023280 3300025945 Bacteria 4232
109 Ga0207640_10001316 3300025981 Bacteria 13468
110 Ga0207640_10062849 3300025981 Bacteria 2465
111 Ga0207658_10001119 3300025986 Bacteria 21651
112 Ga0207677_10000105 3300026023 Bacteria 69286
113 Ga0207703_10065501 3300026035 Bacteria 2986
114 Ga0207639_10000042 3300026041 Bacteria 141299
115 Ga0207678_10054815 3300026067 Bacteria 3434
116 Ga0207708_10000012 3300026075 Bacteria 207611
117 Ga0207641_10008732 3300026088 Bacteria 8371
118 Ga0207648_10012872 3300026089 Bacteria 7812
119 Ga0207674_10018798 3300026116 Bacteria 7497
120 Ga0207675_100029971 3300026118 Bacteria 5065
121 Ga0207675_100032945 3300026118 Bacteria 4828
122 Ga0207428_10006218 3300027907 Bacteria 11032
123 Ga0207428_10081838 3300027907 Bacteria 2520
124 Ga0268266_10001332 3300028379 Bacteria 29935
125 Ga0268266_10004004 3300028379 Bacteria 14255
126 Ga0268265_10000467 3300028380 Bacteria 42804
127 Ga0268265_10013344 3300028380 Bacteria 5582
128 Ga0268264_10013255 3300028381 Bacteria 6786
129 Ga0265338_10003128 3300028800 Bacteria 23651
130 Ga0307511_10000349 3300030521 Bacteria 48983
131 Ga0307511_10012648 3300030521 Bacteria 8269
132 Ga0265332_10034593 3300031238 Bacteria 2195
133 Ga0265325_10004816 3300031241 Bacteria 8449
134 Ga0265339_10001508 3300031249 Bacteria 17201
135 Ga0265331_10000523 3300031250 Bacteria 35510
136 Ga0265327_10001177 3300031251 Bacteria 35490
137 Ga0307509_10063764 3300031507 Bacteria 3879
138 Ga0265313_10000888 3300031595 Bacteria 30118
139 Ga0307508_10023170 3300031616 Bacteria 5640
140 Ga0265314_10000837 3300031711 Bacteria 36366
141 Ga0307410_10041408 3300031852 Bacteria 3038
142 Ga0373929_0000035 3300035085 Bacteria 38214
143 Ga0373955_0025357 3300035172 Bacteria 3044
144 Ga0373961_0001169 3300035241 Bacteria 8193
145 Ga0373935_0001516 3300035692 Bacteria 12921
146 Ga0373947_0014327 3300035725 Bacteria 4548
147 Ga0373937_0063651 3300036401 Bacteria 3393
148 Ga0436365_0084958 3300039437 Bacteria 74213
149 Ga0436362_1031477 3300039453 Bacteria 16559
150 Ga0451577_0127953 3300042876 Bacteria 2277
151 Ga0495629_0000011 3300046459 Bacteria 268675
152 Ga0495620_0004069 3300046515 Bacteria 8296
153 Ga0495666_0000542 3300046526 Bacteria 16785
154 Ga0495586_0002133 3300046535 Bacteria 10747
155 Ga0495668_0020987 3300046616 Bacteria 3752
156 Ga0495635_0010855 3300046663 Bacteria 6382
157 Ga0495658_0004224 3300046683 Bacteria 7067
158 Ga0495600_0030585 3300046809 Bacteria 3487
159 Ga0495672_0008323 3300047320 Bacteria 7677
160 Ga0495676_0020092 3300047321 Bacteria 5869
161 Ga0495679_016977 3300047446 Bacteria 2617
162 Ga0495684_0062686 3300047471 Bacteria 2828
163 Ga0496106_0002086 3300048909 Bacteria 14986
164 Ga0496107_0017995 3300048910 Bacteria 4972
165 Ga0496113_0081557 3300048916 Bacteria 2480
166 Ga0496114_0000026 3300048917 Bacteria 205625
167 Ga0496115_0038101 3300048918 Bacteria 3813
168 Ga0496119_0000982 3300048922 Bacteria 36664
169 Ga0496120_0003985 3300048923 Bacteria 12832
170 Ga0496125_0001415 3300048928 Bacteria 35024
171 Ga0496126_0003541 3300048929 Bacteria 19638
172 Ga0496126_0054566 3300048929 Bacteria 3619
173 Ga0501034_0004899 3300049571 Bacteria 14757
174 Ga0501083_0000238 3300049744 Bacteria 35376
175 nmdc:mga06r32_11028_c1 3300050510 Bacteria 8134
176 nmdc:mga06r32_153483_c1 3300050510 Bacteria 2282
177 nmdc:mga08y16_1101_c1 3300050511 Bacteria 26621
178 nmdc:mga08y16_110462_c1 3300050511 Bacteria 2863
179 nmdc:mga0rr50_279_c1 3300050513 Bacteria 27650
180 nmdc:mga0rr50_56774_c1 3300050513 Bacteria 2926
181 nmdc:mga08x19_1618_c1 3300050514 Bacteria 13974
182 nmdc:mga08x19_675_c1 3300050514 Bacteria 21876
183 Ga0495619_0008023 3300053085 Bacteria 6682
184 Ga0500566_0032098 3300053094 Bacteria 3062
185 2644001511 2643221598 Bacteria 4578346
186 Ga0075428_100076153
187 Ga0065707_10087160
188 Ga0070683_100000284
189 Ga0070670_100000083
190 Ga0068869_100005019
191 Ga0070666_10001256
192 Ga0070666_10006576
193 Ga0068868_100000480
194 Ga0070689_100026779
195 Ga0070687_100007211
196 Ga0070692_10002878
197 Ga0070668_100026325
198 Ga0070669_100000032
199 Ga0070675_100000011
200 Ga0070673_100042682
201 Ga0070667_100001037
202 Ga0070667_100023866
203 Ga0070709_10000026
204 Ga0070713_100006087
205 Ga0070701_10004652
206 Ga0070700_100000297
207 Ga0070663_100030430
208 Ga0070706_100023968
209 Ga0070706_100024409
210 Ga0070707_100038219
211 Ga0070707_100089694
212 Ga0070698_100000968
213 Ga0070684_100000776
214 Ga0070697_100001286
215 Ga0070672_100002652
216 Ga0070672_100010081
217 Ga0070672_100065806
218 Ga0070665_100000545
219 Ga0070665_100000946
220 Ga0070664_100023315
221 Ga0068854_100000784
222 Ga0068856_100002060
223 Ga0070702_100015807
224 Ga0068861_100054080
225 Ga0068870_10000869
226 Ga0068870_10039656
227 Ga0068863_100034368
228 Ga0068858_100024422
229 Ga0068860_100022204
230 Ga0070717_10000178
231 Ga0075428_100046273
232 Ga0075428_100046739
233 Ga0075431_100007112
234 Ga0075431_100035221
235 Ga0068865_100021704
236 Ga0068865_100028491
237 Ga0075436_100004767
238 Ga0075435_100000366
239 Ga0105240_10008723
240 Ga0105240_10017381
241 Ga0111539_10002328
242 Ga0111539_10003121
243 Ga0111539_10112467
244 Ga0105245_10000043
245 Ga0105247_10025587
246 Ga0114129_10360729
247 Ga0105248_10146226
248 Ga0105238_10000008
249 Ga0105249_10071468
250 Ga0157369_10000880
251 Ga0157378_10018215
252 Ga0157375_10000377
253 Ga0157375_10000514
254 Ga0157375_10013706
255 Ga0157375_10035862
256 Ga0163163_10013255
257 Ga0163163_10166064
258 Ga0157380_10002496
259 Ga0157377_10000011
260 Ga0157377_10000216
261 Ga0157379_10023522
262 Ga0157376_10000009
263 Ga0157376_10002986
264 Ga0213876_10000018
265 Ga0207682_10003583
266 Ga0207680_10002709
267 Ga0207680_10003882
268 Ga0207699_10000039
269 Ga0207645_10019476
270 Ga0207643_10012374
271 Ga0207705_10026477
272 Ga0207684_10003334
273 Ga0207695_10010320
274 Ga0207695_10016591
275 Ga0207660_10008754
276 Ga0207662_10002709
277 Ga0207662_10003415
278 Ga0207646_10020081
279 Ga0207646_10091782
280 Ga0207681_10000052
281 Ga0207694_10000001
282 Ga0207650_10000108
283 Ga0207659_10000003
284 Ga0207687_10000024
285 Ga0207700_10017463
286 Ga0207670_10036478
287 Ga0207691_10005376
288 Ga0207691_10023727
289 Ga0207711_10068023
290 Ga0207711_10086424
291 Ga0207689_10019819
292 Ga0207661_10000013
293 Ga0207679_10023280
294 Ga0207640_10001316
295 Ga0207640_10062849
296 Ga0207658_10001119
297 Ga0207677_10000105
298 Ga0207703_10065501
299 Ga0207639_10000042
300 Ga0207678_10054815
301 Ga0207708_10000012
302 Ga0207641_10008732
303 Ga0207648_10012872
304 Ga0207674_10018798
305 Ga0207675_100029971
306 Ga0207675_100032945
307 Ga0207428_10006218
308 Ga0207428_10081838
309 Ga0268266_10001332
310 Ga0268266_10004004
311 Ga0268265_10000467
312 Ga0268265_10013344
313 Ga0268264_10013255
314 Ga0265338_10003128
315 Ga0307511_10000349
316 Ga0307511_10012648
317 Ga0265332_10034593
318 Ga0265325_10004816
319 Ga0265339_10001508
320 Ga0265331_10000523
321 Ga0265327_10001177
322 Ga0307509_10063764
323 Ga0265313_10000888
324 Ga0307508_10023170
325 Ga0265314_10000837
326 Ga0307410_10041408
327 Ga0373929_0000035
328 Ga0373955_0025357
329 Ga0373961_0001169
330 Ga0373935_0001516
331 Ga0373947_0014327
332 Ga0373937_0063651
333 Ga0436365_0084958
334 Ga0436362_1031477
335 Ga0451577_0127953
336 Ga0495629_0000011
337 Ga0495620_0004069
338 Ga0495666_0000542
339 Ga0495586_0002133
340 Ga0495668_0020987
341 Ga0495635_0010855
342 Ga0495658_0004224
343 Ga0495600_0030585
344 Ga0495672_0008323
345 Ga0495676_0020092
346 Ga0495679_016977
347 Ga0495684_0062686
348 Ga0496106_0002086
349 Ga0496107_0017995
350 Ga0496113_0081557
351 Ga0496114_0000026
352 Ga0496115_0038101
353 Ga0496119_0000982
354 Ga0496120_0003985
355 Ga0496125_0001415
356 Ga0496126_0003541
357 Ga0496126_0054566
358 Ga0501034_0004899
359 Ga0501083_0000238
360 nmdc:mga06r32_11028_c1
361 nmdc:mga06r32_153483_c1
362 nmdc:mga08y16_1101_c1
363 nmdc:mga08y16_110462_c1
364 nmdc:mga0rr50_279_c1
365 nmdc:mga0rr50_56774_c1
366 nmdc:mga08x19_1618_c1
367 nmdc:mga08x19_675_c1
368 Ga0495619_0008023
369 Ga0500566_0032098
370 2644001511

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05960

DUF885

Bacterial protein of unknown function (DUF885)

40

571

0.97

PF14534

DUF4440

Domain of unknown function (DUF4440)

590

699

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
3o0y-assembly4.cif.gz_A the crystal structure of the putative lipoprotein from colwellia psychrerythraea 0.9175 29 585
3o0y-assembly2.cif.gz_B the crystal structure of the putative lipoprotein from colwellia psychrerythraea 0.9002 25 585
3o0y-assembly4.cif.gz_A the crystal structure of the putative lipoprotein from colwellia psychrerythraea 0.8739 29 585
3o0y-assembly2.cif.gz_B the crystal structure of the putative lipoprotein from colwellia psychrerythraea 0.8635 25 585
3iuk-assembly1.cif.gz_A crystal structure of putative bacterial protein of unknown function (duf885, pf05960.1, ) from arthrobacter aurescens tc1, reveals fold similar to that of m32 carboxypeptidases 0.8434 33 579
ID Description Score Start End Superfamily
af_Q54Y95_120_681_1.10.1370.30 Mainly Alpha;Orthogonal Bundle;Neurolysin; domain 3; 0.915 61 578 1.10.1370.30
af_Q54Y95_120_681_1.10.1370.30 Mainly Alpha;Orthogonal Bundle;Neurolysin; domain 3; 0.8448 61 578 1.10.1370.30
af_Q2FYQ2_225_603_1.10.1370.20 Mainly Alpha;Orthogonal Bundle;Neurolysin; domain 3;Oligoendopeptidase f, C-terminal domain 0.5232 270 586 1.10.1370.20
af_Q2FYQ2_225_603_1.10.1370.20 Mainly Alpha;Orthogonal Bundle;Neurolysin; domain 3;Oligoendopeptidase f, C-terminal domain 0.4547 270 586 1.10.1370.20
af_Q59NB3_88_198_1.20.58.120 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;BAG domain 0.4418 14 117 1.20.58.120
ID Description Score Start End GO Terms
AF-A0A1G2X101-F1-model_v4 deleted 1 480 586
AF-A0A382LXE7-F1-model_v4 DUF885 domain-containing protein 0.9937 416 587
AF-A0A7X5N3H8-F1-model_v4 DUF885 family protein 0.9914 436 585
AF-A0A356W2A5-F1-model_v4 DUF885 domain-containing protein 0.9907 416 589
AF-A0A849X4S7-F1-model_v4 DUF885 domain-containing protein 0.9903 400 585

Map