F284142
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 185 | 137 | 184 | 476 |
Family's Representative Sequence
| Representative Sequence | 3300006178|Ga0075367_10024502|Ga0075367_100245023 |
| Length | 505 |
| Sequence | VSGAIHQWTARETRQAIRNKQTSATEVVQALLARIAQLDVRDDGRAAAGPALGAFLHVDRDRVLARAAALDADHATADQRPLFGVPVAVKDNLCTRDVPTTAASRILERFVPPYTATAVERLEAAGAIVLGKTNCDEFAMGSSTENSALGVTRNPWALDRIPGGSSGGSAVAVAAGLAPVALGSDTGGSIRQPGSLCGVVGFKPTYGRVSRYGLLAFGSSLDQIGPFARTVQDAADVFAAMAGHDAADATTAHAAVPDLSALGGAASSTPLAGRRIGVPRALLASGVDPVVQTAIDAALAVLERLGATLVDVALPHASAAIPVYYLVATAEASSNLARYDGVRYTARARLAPGDDLAALYDRTRGEHFGAEVKRRIMLGTYVLSAGYYEAYYLKAQRVRTLIRRDYDTAFAADVDAIAMPTCPTPAFRLGERADDPLQMYLADVFTVSANLTGLPAISVPCGFSPDRLPIGLQLTGRPFDEAGLLTVAHAYEQATPWHREHPELA |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2523533628 | Maridesulfovibrio zosterae DSM 11974 | Isolate | Rhizosphere |
| 2 | 3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Metagenome | Rhizosphere |
| 3 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 4 | 3300005333 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 6 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 7 | 3300005343 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG | Metagenome | Rhizosphere |
| 8 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Metagenome | Rhizosphere |
| 13 | 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Metagenome | Rhizosphere |
| 14 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 15 | 3300005438 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG | Metagenome | Rhizosphere |
| 16 | 3300005440 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 18 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 20 | 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Metagenome | Rhizosphere |
| 21 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 22 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 23 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 24 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 25 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 26 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 27 | 3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Metagenome | Rhizosphere |
| 28 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 29 | 3300005718 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 | Metagenome | Rhizosphere |
| 30 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 31 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 32 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 33 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 34 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 35 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 36 | 3300006177 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 | Metagenome | Endosphere |
| 37 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 38 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 39 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 41 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 42 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 43 | 3300006852 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Metagenome | Rhizosphere |
| 44 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 45 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 46 | 3300006914 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 | Metagenome | Rhizosphere |
| 47 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 49 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 52 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 53 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 54 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 55 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 56 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 57 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 58 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 59 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 60 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300027682 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300027866 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) | Metagenome | Endosphere |
| 82 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 83 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300028653 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG | Metagenome | Rhizosphere |
| 85 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 86 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 87 | 3300031238 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG | Metagenome | Rhizosphere |
| 88 | 3300031247 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG | Metagenome | Rhizosphere |
| 89 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 90 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 91 | 3300031665 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 | Metagenome | Rhizosphere |
| 92 | 3300031712 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG | Metagenome | Rhizosphere |
| 93 | 3300033529 | Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 94 | 3300035170 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 | Metagenome | Rhizosphere |
| 95 | 3300035172 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 | Metagenome | Rhizosphere |
| 96 | 3300035691 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 | Metagenome | Rhizosphere |
| 97 | 3300035725 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 | Metagenome | Rhizosphere |
| 98 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 99 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 100 | 3300038726 | Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 | Metagenome | Unclassified |
| 101 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 102 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 103 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 104 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 105 | 3300044735 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R | Metagenome | Rhizosphere |
| 106 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 107 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 108 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300046472 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300046506 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300046683 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300047318 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 121 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 122 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 123 | 3300050489 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation | Metagenome | Endosphere |
| 124 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 125 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 126 | 3300050494 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation | Metagenome | Endosphere |
| 127 | 3300050495 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation | Metagenome | Endosphere |
| 128 | 3300050496 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation | Metagenome | Endosphere |
| 129 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 130 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 131 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 132 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 133 | 3300050513 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation | Metagenome | Rhizosphere |
| 134 | 3300050514 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation | Metagenome | Rhizosphere |
| 135 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 136 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 137 | 3300053096 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere | Metagenome | Endosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 98.92 |
| Metatranscriptomes | 0.54 |
| Isolates | 0.54 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 12.97 |
| Nodule | 0 |
| Rhizoplane | 1.08 |
| Rhizosphere | 84.32 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 1.62 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0070690_100025729 | 3300005330 | Bacteria | 3624 |
| 2 | Ga0070670_100048185 | 3300005331 | Bacteria | 3667 |
| 3 | Ga0070677_10036411 | 3300005333 | Bacteria | 1914 |
| 4 | Ga0068869_100021574 | 3300005334 | Bacteria | 4433 |
| 5 | Ga0070689_100004875 | 3300005340 | Bacteria | 9111 |
| 6 | Ga0070687_100020740 | 3300005343 | Bacteria | 3078 |
| 7 | Ga0070661_100071071 | 3300005344 | Bacteria | 2560 |
| 8 | Ga0070675_100000256 | 3300005354 | Bacteria | 34835 |
| 9 | Ga0070675_100134520 | 3300005354 | Bacteria | 2109 |
| 10 | Ga0070674_100002747 | 3300005356 | Bacteria | 9728 |
| 11 | Ga0070673_100001513 | 3300005364 | Bacteria | 13666 |
| 12 | Ga0070673_100009257 | 3300005364 | Bacteria | 6608 |
| 13 | Ga0070688_100054339 | 3300005365 | Bacteria | 2508 |
| 14 | Ga0070709_10019662 | 3300005434 | Bacteria | 3908 |
| 15 | Ga0070713_100022485 | 3300005436 | Bacteria | 4874 |
| 16 | Ga0070701_10002082 | 3300005438 | Bacteria | 7593 |
| 17 | Ga0070705_100010185 | 3300005440 | Bacteria | 4698 |
| 18 | Ga0070700_100026537 | 3300005441 | Bacteria | 3422 |
| 19 | Ga0070663_100062123 | 3300005455 | Bacteria | 2692 |
| 20 | Ga0068867_100144871 | 3300005459 | Bacteria | 1860 |
| 21 | Ga0070685_10017511 | 3300005466 | Bacteria | 3837 |
| 22 | Ga0070706_100006519 | 3300005467 | Bacteria | 11016 |
| 23 | Ga0070698_100000222 | 3300005471 | Bacteria | 56055 |
| 24 | Ga0070699_100171078 | 3300005518 | Bacteria | 1925 |
| 25 | Ga0070697_100025467 | 3300005536 | Bacteria | 4719 |
| 26 | Ga0070672_100010999 | 3300005543 | Bacteria | 6297 |
| 27 | Ga0070672_100135414 | 3300005543 | Bacteria | 2028 |
| 28 | Ga0068854_100042482 | 3300005578 | Bacteria | 3218 |
| 29 | Ga0070702_100009420 | 3300005615 | Bacteria | 4778 |
| 30 | Ga0068859_100048150 | 3300005617 | Bacteria | 4282 |
| 31 | Ga0068859_100107109 | 3300005617 | Bacteria | 2855 |
| 32 | Ga0068866_10009900 | 3300005718 | Bacteria | 4067 |
| 33 | Ga0068858_100112093 | 3300005842 | Bacteria | 2547 |
| 34 | Ga0068860_100021914 | 3300005843 | Bacteria | 6181 |
| 35 | Ga0081539_10005962 | 3300005985 | Bacteria | 12013 |
| 36 | Ga0075365_10048118 | 3300006038 | Bacteria | 2806 |
| 37 | Ga0075364_10003365 | 3300006051 | Bacteria | 9074 |
| 38 | Ga0075364_10003500 | 3300006051 | Bacteria | 8938 |
| 39 | Ga0070712_100185961 | 3300006175 | Bacteria | 1622 |
| 40 | Ga0075362_10000801 | 3300006177 | Bacteria | 9387 |
| 41 | Ga0075367_10001918 | 3300006178 | Bacteria | 9230 |
| 42 | Ga0075367_10024502 | 3300006178 | Bacteria | 3404 |
| 43 | Ga0075366_10004820 | 3300006195 | Bacteria | 7278 |
| 44 | Ga0097621_100047805 | 3300006237 | Bacteria | 3468 |
| 45 | Ga0075370_10037008 | 3300006353 | Bacteria | 2743 |
| 46 | Ga0075428_100002826 | 3300006844 | Bacteria | 18902 |
| 47 | Ga0075428_100042338 | 3300006844 | Bacteria | 5007 |
| 48 | Ga0075428_100056986 | 3300006844 | Bacteria | 4279 |
| 49 | Ga0075428_100236938 | 3300006844 | Bacteria | 1969 |
| 50 | Ga0075431_100016392 | 3300006847 | Bacteria | 7520 |
| 51 | Ga0075431_100060798 | 3300006847 | Bacteria | 3899 |
| 52 | Ga0075433_10001116 | 3300006852 | Bacteria | 19408 |
| 53 | Ga0075434_100004775 | 3300006871 | Bacteria | 12271 |
| 54 | Ga0075434_100088722 | 3300006871 | Bacteria | 3094 |
| 55 | Ga0075434_100242523 | 3300006871 | Bacteria | 1822 |
| 56 | Ga0075429_100022053 | 3300006880 | Bacteria | 5523 |
| 57 | Ga0075429_100075914 | 3300006880 | Bacteria | 2927 |
| 58 | Ga0075436_100000068 | 3300006914 | Bacteria | 62600 |
| 59 | Ga0097620_100048151 | 3300006931 | Bacteria | 4282 |
| 60 | Ga0097620_100107114 | 3300006931 | Bacteria | 2855 |
| 61 | Ga0105240_10000016 | 3300009093 | Bacteria | 447794 |
| 62 | Ga0111539_10002064 | 3300009094 | Bacteria | 26855 |
| 63 | Ga0111539_10010441 | 3300009094 | Bacteria | 11689 |
| 64 | Ga0111539_10154439 | 3300009094 | Bacteria | 2686 |
| 65 | Ga0111539_10163950 | 3300009094 | Bacteria | 2599 |
| 66 | Ga0111539_10212234 | 3300009094 | Bacteria | 2255 |
| 67 | Ga0114129_10000340 | 3300009147 | Bacteria | 54409 |
| 68 | Ga0114129_10002704 | 3300009147 | Bacteria | 24696 |
| 69 | Ga0114129_10047349 | 3300009147 | Bacteria | 6042 |
| 70 | Ga0105243_10014244 | 3300009148 | Bacteria | 6017 |
| 71 | Ga0105243_10014520 | 3300009148 | Bacteria | 5959 |
| 72 | Ga0105242_10026626 | 3300009176 | Bacteria | 4584 |
| 73 | Ga0105248_10030068 | 3300009177 | Bacteria | 6062 |
| 74 | Ga0105249_10078544 | 3300009553 | Bacteria | 3063 |
| 75 | Ga0105239_10124522 | 3300010375 | Bacteria | 2864 |
| 76 | Ga0157370_10099917 | 3300013104 | Bacteria | 2719 |
| 77 | Ga0157378_10010006 | 3300013297 | Bacteria | 8271 |
| 78 | Ga0163163_10061847 | 3300014325 | Bacteria | 3710 |
| 79 | Ga0157380_10030352 | 3300014326 | Bacteria | 4140 |
| 80 | Ga0157380_10039332 | 3300014326 | Bacteria | 3677 |
| 81 | Ga0207645_10009140 | 3300025907 | Bacteria | 6873 |
| 82 | Ga0207684_10001935 | 3300025910 | Bacteria | 21461 |
| 83 | Ga0207695_10000042 | 3300025913 | Bacteria | 447793 |
| 84 | Ga0207681_10010897 | 3300025923 | Bacteria | 5583 |
| 85 | Ga0207650_10020588 | 3300025925 | Bacteria | 4653 |
| 86 | Ga0207659_10004455 | 3300025926 | Bacteria | 8478 |
| 87 | Ga0207659_10106075 | 3300025926 | Bacteria | 2127 |
| 88 | Ga0207659_10126367 | 3300025926 | Bacteria | 1967 |
| 89 | Ga0207644_10030699 | 3300025931 | Bacteria | 3739 |
| 90 | Ga0207706_10139013 | 3300025933 | Bacteria | 2136 |
| 91 | Ga0207691_10007767 | 3300025940 | Bacteria | 10332 |
| 92 | Ga0207691_10158556 | 3300025940 | Bacteria | 1986 |
| 93 | Ga0207711_10043851 | 3300025941 | Bacteria | 3817 |
| 94 | Ga0207689_10023848 | 3300025942 | Bacteria | 5133 |
| 95 | Ga0207651_10001622 | 3300025960 | Bacteria | 10322 |
| 96 | Ga0207712_10055323 | 3300025961 | Bacteria | 2791 |
| 97 | Ga0207640_10074923 | 3300025981 | Bacteria | 2292 |
| 98 | Ga0207678_10017675 | 3300026067 | Bacteria | 6260 |
| 99 | Ga0207708_10000690 | 3300026075 | Bacteria | 25620 |
| 100 | Ga0207641_10041418 | 3300026088 | Bacteria | 3860 |
| 101 | Ga0207648_10001594 | 3300026089 | Bacteria | 24839 |
| 102 | Ga0207648_10049297 | 3300026089 | Bacteria | 3685 |
| 103 | Ga0207675_100033630 | 3300026118 | Bacteria | 4777 |
| 104 | Ga0207683_10007959 | 3300026121 | Bacteria | 9065 |
| 105 | Ga0207683_10082128 | 3300026121 | Bacteria | 2862 |
| 106 | Ga0209971_1028248 | 3300027682 | Bacteria | 1342 |
| 107 | Ga0209813_10018165 | 3300027866 | Bacteria | 1939 |
| 108 | Ga0207428_10006990 | 3300027907 | Bacteria | 10335 |
| 109 | Ga0207428_10029325 | 3300027907 | Bacteria | 4561 |
| 110 | Ga0268265_10037920 | 3300028380 | Bacteria | 3540 |
| 111 | Ga0265323_10001169 | 3300028653 | Bacteria | 13410 |
| 112 | Ga0265323_10013478 | 3300028653 | Bacteria | 3258 |
| 113 | Ga0307515_10000015 | 3300028794 | Bacteria | 557886 |
| 114 | Ga0265338_10000071 | 3300028800 | Bacteria | 184107 |
| 115 | Ga0265332_10006385 | 3300031238 | Bacteria | 5347 |
| 116 | Ga0265340_10002631 | 3300031247 | Bacteria | 10207 |
| 117 | Ga0265339_10006603 | 3300031249 | Bacteria | 7591 |
| 118 | Ga0265316_10000081 | 3300031344 | Bacteria | 100263 |
| 119 | Ga0316575_10000057 | 3300031665 | Bacteria | 27133 |
| 120 | Ga0265342_10000012 | 3300031712 | Bacteria | 206037 |
| 121 | Ga0316587_1003364 | 3300033529 | Bacteria | 2234 |
| 122 | Ga0373943_0002051 | 3300035170 | Bacteria | 9142 |
| 123 | Ga0373955_0019671 | 3300035172 | Bacteria | 3379 |
| 124 | Ga0373931_0024673 | 3300035691 | Bacteria | 3049 |
| 125 | Ga0373947_0049406 | 3300035725 | Bacteria | 2526 |
| 126 | Ga0373937_0006081 | 3300036401 | Bacteria | 10395 |
| 127 | Ga0395905_0000938 | 3300037471 | Bacteria | 37508 |
| 128 | Ga0400490_44488 | 3300038726 | Bacteria | 21852 |
| 129 | Ga0451577_0004315 | 3300042876 | Bacteria | 15094 |
| 130 | Ga0466972_0005418 | 3300044658 | Bacteria | 6392 |
| 131 | Ga0466965_0001497 | 3300044683 | Bacteria | 9470 |
| 132 | Ga0453684_0004179 | 3300044712 | Bacteria | 31099 |
| 133 | Ga0466968_0010813 | 3300044735 | Bacteria | 3546 |
| 134 | Ga0466960_0005860 | 3300044901 | Bacteria | 4897 |
| 135 | Ga0451576_0132881 | 3300045051 | Bacteria | 2594 |
| 136 | Ga0451576_0149362 | 3300045051 | Bacteria | 2437 |
| 137 | Ga0495592_0009245 | 3300046454 | Bacteria | 7414 |
| 138 | Ga0495638_0005649 | 3300046460 | Bacteria | 9218 |
| 139 | Ga0495580_0001200 | 3300046472 | Bacteria | 22786 |
| 140 | Ga0495580_0057963 | 3300046472 | Bacteria | 2725 |
| 141 | Ga0495583_0018553 | 3300046506 | Unclassified | 3659 |
| 142 | Ga0495628_0097753 | 3300046516 | Bacteria | 2268 |
| 143 | Ga0495630_0057610 | 3300046517 | Bacteria | 2912 |
| 144 | Ga0495587_0029447 | 3300046536 | Bacteria | 3333 |
| 145 | Ga0495667_0045522 | 3300046559 | Bacteria | 2905 |
| 146 | Ga0495658_0019637 | 3300046683 | Bacteria | 3530 |
| 147 | Ga0495613_0000688 | 3300046689 | Bacteria | 26725 |
| 148 | Ga0495636_0000572 | 3300047318 | Bacteria | 13552 |
| 149 | Ga0495684_0000601 | 3300047471 | Bacteria | 28931 |
| 150 | Ga0496106_0181713 | 3300048909 | Bacteria | 1670 |
| 151 | Ga0496109_0195764 | 3300048912 | Bacteria | 1900 |
| 152 | Ga0496122_0023970 | 3300048925 | Bacteria | 5357 |
| 153 | nmdc:mga03683_1585_c1 | 3300050489 | Bacteria | 6798 |
| 154 | nmdc:mga00v17_114706_c1 | 3300050491 | Bacteria | 1711 |
| 155 | nmdc:mga00v17_2954_c1 | 3300050491 | Bacteria | 8726 |
| 156 | nmdc:mga00v17_41637_c2 | 3300050491 | Bacteria | 2449 |
| 157 | nmdc:mga00v17_53995_c1 | 3300050491 | Bacteria | 2451 |
| 158 | nmdc:mga0k408_3615_c1 | 3300050493 | Bacteria | 8179 |
| 159 | nmdc:mga0k408_6304_c1 | 3300050493 | Bacteria | 6329 |
| 160 | nmdc:mga06z11_49452_c1 | 3300050494 | Bacteria | 2145 |
| 161 | nmdc:mga06z11_61928_c1 | 3300050494 | Bacteria | 1953 |
| 162 | nmdc:mga06z11_7556_c1 | 3300050494 | Bacteria | 4482 |
| 163 | nmdc:mga06z11_8309_c1 | 3300050494 | Bacteria | 4323 |
| 164 | nmdc:mga04h51_18403_c1 | 3300050495 | Bacteria | 2057 |
| 165 | nmdc:mga07m45_11668_c1 | 3300050496 | Bacteria | 4621 |
| 166 | nmdc:mga07m45_13198_c1 | 3300050496 | Bacteria | 4377 |
| 167 | nmdc:mga05p37_1579_c1 | 3300050507 | Bacteria | 26473 |
| 168 | nmdc:mga05p37_182_c1 | 3300050507 | Bacteria | 61525 |
| 169 | nmdc:mga05p37_5181_c1 | 3300050507 | Bacteria | 15295 |
| 170 | nmdc:mga09592_14544_c1 | 3300050508 | Bacteria | 6422 |
| 171 | nmdc:mga08y16_113832_c1 | 3300050511 | Bacteria | 2816 |
| 172 | nmdc:mga08y16_1210_c1 | 3300050511 | Bacteria | 25502 |
| 173 | nmdc:mga08y16_123444_c1 | 3300050511 | Bacteria | 2695 |
| 174 | nmdc:mga08y16_6199_c1 | 3300050511 | Bacteria | 12545 |
| 175 | nmdc:mga0n895_3828_c1 | 3300050512 | Bacteria | 12204 |
| 176 | nmdc:mga0rr50_21392_c1 | 3300050513 | Bacteria | 4415 |
| 177 | nmdc:mga0rr50_434_c1 | 3300050513 | Bacteria | 22445 |
| 178 | nmdc:mga0rr50_79641_c1 | 3300050513 | Bacteria | 2524 |
| 179 | nmdc:mga08x19_1172_c1 | 3300050514 | Bacteria | 16431 |
| 180 | nmdc:mga08x19_2_c1 | 3300050514 | Bacteria | 741277 |
| 181 | nmdc:mga0a205_1328_c1 | 3300050515 | Bacteria | 20870 |
| 182 | Ga0495619_0000386 | 3300053085 | Bacteria | 30136 |
| 183 | Ga0495619_0016742 | 3300053085 | Bacteria | 4641 |
| 184 | Ga0500641_0000754 | 3300053096 | Bacteria | 11744 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300027682 | Ga0209971_1028248 | Ga0209971_10282481 | 378 |
| 2 | 3300050513 | nmdc:mga0rr50_21392_c1 | nmdc:mga0rr50_21392_c1_2342_3814 | 426 |
| 3 | 3300006852 | Ga0075433_10001116 | Ga0075433_1000111622 | 436 |
| 4 | 3300006871 | Ga0075434_100004775 | Ga0075434_1000047757 | 436 |
| 5 | 3300006914 | Ga0075436_100000068 | Ga0075436_10000006855 | 436 |
| 6 | 3300009147 | Ga0114129_10002704 | Ga0114129_100027043 | 436 |
| 7 | 3300050507 | nmdc:mga05p37_1579_c1 | nmdc:mga05p37_1579_c1_2662_4041 | 436 |
| 8 | 3300050512 | nmdc:mga0n895_3828_c1 | nmdc:mga0n895_3828_c1_8524_9903 | 436 |
| 9 | 3300050513 | nmdc:mga0rr50_434_c1 | nmdc:mga0rr50_434_c1_2302_3681 | 436 |
| 10 | 3300050514 | nmdc:mga08x19_1172_c1 | nmdc:mga08x19_1172_c1_8719_10098 | 436 |
| 11 | 3300050515 | nmdc:mga0a205_1328_c1 | nmdc:mga0a205_1328_c1_16506_17885 | 436 |
| 12 | 3300009094 | Ga0111539_10163950 | Ga0111539_101639503 | 439 |
| 13 | 3300009147 | Ga0114129_10047349 | Ga0114129_100473492 | 440 |
| 14 | 3300050507 | nmdc:mga05p37_182_c1 | nmdc:mga05p37_182_c1_13110_14588 | 440 |
| 15 | 3300013104 | Ga0157370_10099917 | Ga0157370_100999172 | 442 |
| 16 | 3300046506 | Ga0495583_0018553 | Ga0495583_0018553_2024_3544 | 442 |
| 17 | 3300006847 | Ga0075431_100060798 | Ga0075431_1000607982 | 444 |
| 18 | 3300050508 | nmdc:mga09592_14544_c1 | nmdc:mga09592_14544_c1_3774_5315 | 444 |
| 19 | 3300028653 | Ga0265323_10013478 | Ga0265323_100134783 | 445 |
| 20 | 3300031344 | Ga0265316_10000081 | Ga0265316_1000008156 | 445 |
| 21 | 3300048925 | Ga0496122_0023970 | Ga0496122_0023970_199_1662 | 446 |
| 22 | 3300009148 | Ga0105243_10014244 | Ga0105243_100142443 | 449 |
| 23 | 3300006038 | Ga0075365_10048118 | Ga0075365_100481182 | 451 |
| 24 | 3300042876 | Ga0451577_0004315 | Ga0451577_0004315_11696_13162 | 453 |
| 25 | 3300028653 | Ga0265323_10001169 | Ga0265323_100011699 | 454 |
| 26 | 3300048912 | Ga0496109_0195764 | Ga0496109_0195764_12_1412 | 455 |
| 27 | 3300009093 | Ga0105240_10000016 | Ga0105240_10000016310 | 457 |
| 28 | 3300006844 | Ga0075428_100042338 | Ga0075428_1000423384 | 458 |
| 29 | 3300009094 | Ga0111539_10002064 | Ga0111539_100020645 | 458 |
| 30 | 3300027907 | Ga0207428_10029325 | Ga0207428_100293252 | 458 |
| 31 | 3300031238 | Ga0265332_10006385 | Ga0265332_100063854 | 458 |
| 32 | 3300031247 | Ga0265340_10002631 | Ga0265340_100026317 | 458 |
| 33 | 3300031249 | Ga0265339_10006603 | Ga0265339_100066036 | 458 |
| 34 | 3300031712 | Ga0265342_10000012 | Ga0265342_1000001212 | 458 |
| 35 | 3300050494 | nmdc:mga06z11_7556_c1 | nmdc:mga06z11_7556_c1_1134_2639 | 458 |
| 36 | 3300050511 | nmdc:mga08y16_1210_c1 | nmdc:mga08y16_1210_c1_21329_22786 | 458 |
| 37 | 3300009094 | Ga0111539_10010441 | Ga0111539_100104419 | 460 |
| 38 | 3300027907 | Ga0207428_10006990 | Ga0207428_100069904 | 460 |
| 39 | 3300050511 | nmdc:mga08y16_6199_c1 | nmdc:mga08y16_6199_c1_3250_4746 | 460 |
| 40 | 3300005333 | Ga0070677_10036411 | Ga0070677_100364112 | 461 |
| 41 | 3300006237 | Ga0097621_100047805 | Ga0097621_1000478055 | 461 |
| 42 | 3300013297 | Ga0157378_10010006 | Ga0157378_100100068 | 461 |
| 43 | 3300025913 | Ga0207695_10000042 | Ga0207695_10000042310 | 461 |
| 44 | 3300028794 | Ga0307515_10000015 | Ga0307515_10000015239 | 461 |
| 45 | 3300031665 | Ga0316575_10000057 | Ga0316575_100000578 | 461 |
| 46 | 3300033529 | Ga0316587_1003364 | Ga0316587_10033643 | 461 |
| 47 | 3300037471 | Ga0395905_0000938 | Ga0395905_0000938_34828_36273 | 461 |
| 48 | 3300005518 | Ga0070699_100171078 | Ga0070699_1001710782 | 462 |
| 49 | 3300014326 | Ga0157380_10030352 | Ga0157380_100303523 | 462 |
| 50 | 3300045051 | Ga0451576_0132881 | Ga0451576_0132881_280_1746 | 462 |
| 51 | 3300005344 | Ga0070661_100071071 | Ga0070661_1000710712 | 463 |
| 52 | 3300006847 | Ga0075431_100016392 | Ga0075431_1000163927 | 463 |
| 53 | 3300014326 | Ga0157380_10039332 | Ga0157380_100393323 | 463 |
| 54 | 3300025923 | Ga0207681_10010897 | Ga0207681_100108973 | 463 |
| 55 | 3300025961 | Ga0207712_10055323 | Ga0207712_100553233 | 463 |
| 56 | 3300026089 | Ga0207648_10049297 | Ga0207648_100492972 | 463 |
| 57 | 3300026118 | Ga0207675_100033630 | Ga0207675_1000336306 | 463 |
| 58 | 3300028380 | Ga0268265_10037920 | Ga0268265_100379203 | 463 |
| 59 | 3300046472 | Ga0495580_0001200 | Ga0495580_0001200_5731_7194 | 463 |
| 60 | iso_pu_bacteria | 2523533628 | 2524000769 | 463 |
| 61 | 3300006844 | Ga0075428_100002826 | Ga0075428_10000282614 | 464 |
| 62 | 3300006844 | Ga0075428_100236938 | Ga0075428_1002369381 | 464 |
| 63 | 3300006871 | Ga0075434_100242523 | Ga0075434_1002425232 | 464 |
| 64 | 3300006880 | Ga0075429_100075914 | Ga0075429_1000759144 | 464 |
| 65 | 3300009094 | Ga0111539_10154439 | Ga0111539_101544393 | 464 |
| 66 | 3300009094 | Ga0111539_10212234 | Ga0111539_102122343 | 464 |
| 67 | 3300009147 | Ga0114129_10000340 | Ga0114129_1000034030 | 464 |
| 68 | 3300050507 | nmdc:mga05p37_5181_c1 | nmdc:mga05p37_5181_c1_9072_10514 | 464 |
| 69 | 3300050511 | nmdc:mga08y16_113832_c1 | nmdc:mga08y16_113832_c1_1180_2610 | 464 |
| 70 | 3300050511 | nmdc:mga08y16_123444_c1 | nmdc:mga08y16_123444_c1_1080_2534 | 464 |
| 71 | 3300005985 | Ga0081539_10005962 | Ga0081539_100059622 | 465 |
| 72 | 3300006844 | Ga0075428_100056986 | Ga0075428_1000569862 | 465 |
| 73 | 3300036401 | Ga0373937_0006081 | Ga0373937_0006081_2681_4174 | 465 |
| 74 | 3300044658 | Ga0466972_0005418 | Ga0466972_0005418_1241_2698 | 465 |
| 75 | 3300044683 | Ga0466965_0001497 | Ga0466965_0001497_2420_3877 | 465 |
| 76 | 3300044735 | Ga0466968_0010813 | Ga0466968_0010813_478_1935 | 465 |
| 77 | 3300044901 | Ga0466960_0005860 | Ga0466960_0005860_1043_2500 | 465 |
| 78 | 3300005354 | Ga0070675_100134520 | Ga0070675_1001345201 | 466 |
| 79 | 3300005365 | Ga0070688_100054339 | Ga0070688_1000543392 | 466 |
| 80 | 3300005434 | Ga0070709_10019662 | Ga0070709_100196625 | 466 |
| 81 | 3300005436 | Ga0070713_100022485 | Ga0070713_1000224853 | 466 |
| 82 | 3300005466 | Ga0070685_10017511 | Ga0070685_100175113 | 466 |
| 83 | 3300006880 | Ga0075429_100022053 | Ga0075429_1000220532 | 466 |
| 84 | 3300025926 | Ga0207659_10106075 | Ga0207659_101060752 | 466 |
| 85 | 3300044712 | Ga0453684_0004179 | Ga0453684_0004179_5626_7089 | 466 |
| 86 | 3300046460 | Ga0495638_0005649 | Ga0495638_0005649_1666_3123 | 466 |
| 87 | 3300046472 | Ga0495580_0057963 | Ga0495580_0057963_361_1833 | 466 |
| 88 | 3300046516 | Ga0495628_0097753 | Ga0495628_0097753_447_1901 | 466 |
| 89 | 3300046683 | Ga0495658_0019637 | Ga0495658_0019637_1436_2902 | 466 |
| 90 | 3300005354 | Ga0070675_100000256 | Ga0070675_10000025634 | 467 |
| 91 | 3300005356 | Ga0070674_100002747 | Ga0070674_1000027477 | 467 |
| 92 | 3300005467 | Ga0070706_100006519 | Ga0070706_1000065195 | 467 |
| 93 | 3300005471 | Ga0070698_100000222 | Ga0070698_10000022229 | 467 |
| 94 | 3300005536 | Ga0070697_100025467 | Ga0070697_1000254673 | 467 |
| 95 | 3300025910 | Ga0207684_10001935 | Ga0207684_1000193518 | 467 |
| 96 | 3300025926 | Ga0207659_10004455 | Ga0207659_100044553 | 467 |
| 97 | 3300025926 | Ga0207659_10126367 | Ga0207659_101263671 | 467 |
| 98 | 3300038726 | Ga0400490_44488 | Ga0400490_44488_3628_5091 | 467 |
| 99 | 3300047318 | Ga0495636_0000572 | Ga0495636_0000572_1352_2833 | 467 |
| 100 | 3300050491 | nmdc:mga00v17_41637_c2 | nmdc:mga00v17_41637_c2_867_2354 | 467 |
| 101 | 3300050514 | nmdc:mga08x19_2_c1 | nmdc:mga08x19_2_c1_193854_195320 | 467 |
| 102 | 3300053096 | Ga0500641_0000754 | Ga0500641_0000754_8998_10470 | 467 |
| 103 | 3300005330 | Ga0070690_100025729 | Ga0070690_1000257294 | 468 |
| 104 | 3300005331 | Ga0070670_100048185 | Ga0070670_1000481851 | 468 |
| 105 | 3300005334 | Ga0068869_100021574 | Ga0068869_1000215747 | 468 |
| 106 | 3300005340 | Ga0070689_100004875 | Ga0070689_10000487513 | 468 |
| 107 | 3300005343 | Ga0070687_100020740 | Ga0070687_1000207402 | 468 |
| 108 | 3300005364 | Ga0070673_100001513 | Ga0070673_10000151312 | 468 |
| 109 | 3300005364 | Ga0070673_100009257 | Ga0070673_1000092576 | 468 |
| 110 | 3300005438 | Ga0070701_10002082 | Ga0070701_100020823 | 468 |
| 111 | 3300005440 | Ga0070705_100010185 | Ga0070705_1000101853 | 468 |
| 112 | 3300005441 | Ga0070700_100026537 | Ga0070700_1000265374 | 468 |
| 113 | 3300005455 | Ga0070663_100062123 | Ga0070663_1000621232 | 468 |
| 114 | 3300005459 | Ga0068867_100144871 | Ga0068867_1001448712 | 468 |
| 115 | 3300005543 | Ga0070672_100010999 | Ga0070672_1000109992 | 468 |
| 116 | 3300005543 | Ga0070672_100135414 | Ga0070672_1001354141 | 468 |
| 117 | 3300005578 | Ga0068854_100042482 | Ga0068854_1000424822 | 468 |
| 118 | 3300005615 | Ga0070702_100009420 | Ga0070702_1000094203 | 468 |
| 119 | 3300005617 | Ga0068859_100048150 | Ga0068859_1000481507 | 468 |
| 120 | 3300005617 | Ga0068859_100107109 | Ga0068859_1001071092 | 468 |
| 121 | 3300005718 | Ga0068866_10009900 | Ga0068866_100099007 | 468 |
| 122 | 3300005842 | Ga0068858_100112093 | Ga0068858_1001120933 | 468 |
| 123 | 3300005843 | Ga0068860_100021914 | Ga0068860_1000219148 | 468 |
| 124 | 3300006051 | Ga0075364_10003365 | Ga0075364_100033657 | 468 |
| 125 | 3300006051 | Ga0075364_10003500 | Ga0075364_100035007 | 468 |
| 126 | 3300006175 | Ga0070712_100185961 | Ga0070712_1001859611 | 468 |
| 127 | 3300006177 | Ga0075362_10000801 | Ga0075362_100008017 | 468 |
| 128 | 3300006178 | Ga0075367_10001918 | Ga0075367_1000191811 | 468 |
| 129 | 3300006178 | Ga0075367_10024502 | Ga0075367_100245023 | 468 |
| 130 | 3300006195 | Ga0075366_10004820 | Ga0075366_100048205 | 468 |
| 131 | 3300006353 | Ga0075370_10037008 | Ga0075370_100370082 | 468 |
| 132 | 3300006871 | Ga0075434_100088722 | Ga0075434_1000887223 | 468 |
| 133 | 3300006931 | Ga0097620_100048151 | Ga0097620_1000481517 | 468 |
| 134 | 3300006931 | Ga0097620_100107114 | Ga0097620_1001071142 | 468 |
| 135 | 3300009148 | Ga0105243_10014520 | Ga0105243_100145204 | 468 |
| 136 | 3300009176 | Ga0105242_10026626 | Ga0105242_100266267 | 468 |
| 137 | 3300009177 | Ga0105248_10030068 | Ga0105248_100300689 | 468 |
| 138 | 3300009553 | Ga0105249_10078544 | Ga0105249_100785441 | 468 |
| 139 | 3300010375 | Ga0105239_10124522 | Ga0105239_101245222 | 468 |
| 140 | 3300014325 | Ga0163163_10061847 | Ga0163163_100618473 | 468 |
| 141 | 3300025907 | Ga0207645_10009140 | Ga0207645_100091408 | 468 |
| 142 | 3300025925 | Ga0207650_10020588 | Ga0207650_100205886 | 468 |
| 143 | 3300025931 | Ga0207644_10030699 | Ga0207644_100306994 | 468 |
| 144 | 3300025933 | Ga0207706_10139013 | Ga0207706_101390132 | 468 |
| 145 | 3300025940 | Ga0207691_10007767 | Ga0207691_100077679 | 468 |
| 146 | 3300025940 | Ga0207691_10158556 | Ga0207691_101585562 | 468 |
| 147 | 3300025941 | Ga0207711_10043851 | Ga0207711_100438513 | 468 |
| 148 | 3300025942 | Ga0207689_10023848 | Ga0207689_100238483 | 468 |
| 149 | 3300025960 | Ga0207651_10001622 | Ga0207651_100016229 | 468 |
| 150 | 3300025981 | Ga0207640_10074923 | Ga0207640_100749233 | 468 |
| 151 | 3300026067 | Ga0207678_10017675 | Ga0207678_100176754 | 468 |
| 152 | 3300026075 | Ga0207708_10000690 | Ga0207708_1000069021 | 468 |
| 153 | 3300026088 | Ga0207641_10041418 | Ga0207641_100414185 | 468 |
| 154 | 3300026089 | Ga0207648_10001594 | Ga0207648_1000159419 | 468 |
| 155 | 3300026121 | Ga0207683_10007959 | Ga0207683_100079592 | 468 |
| 156 | 3300026121 | Ga0207683_10082128 | Ga0207683_100821283 | 468 |
| 157 | 3300027866 | Ga0209813_10018165 | Ga0209813_100181652 | 468 |
| 158 | 3300028800 | Ga0265338_10000071 | Ga0265338_10000071124 | 468 |
| 159 | 3300035170 | Ga0373943_0002051 | Ga0373943_0002051_5696_7156 | 468 |
| 160 | 3300035172 | Ga0373955_0019671 | Ga0373955_0019671_1487_2947 | 468 |
| 161 | 3300035691 | Ga0373931_0024673 | Ga0373931_0024673_744_2183 | 468 |
| 162 | 3300035725 | Ga0373947_0049406 | Ga0373947_0049406_997_2457 | 468 |
| 163 | 3300045051 | Ga0451576_0149362 | Ga0451576_0149362_419_1879 | 468 |
| 164 | 3300046454 | Ga0495592_0009245 | Ga0495592_0009245_2252_3712 | 468 |
| 165 | 3300046517 | Ga0495630_0057610 | Ga0495630_0057610_181_1641 | 468 |
| 166 | 3300046536 | Ga0495587_0029447 | Ga0495587_0029447_1454_2914 | 468 |
| 167 | 3300046559 | Ga0495667_0045522 | Ga0495667_0045522_310_1770 | 468 |
| 168 | 3300046689 | Ga0495613_0000688 | Ga0495613_0000688_24180_25640 | 468 |
| 169 | 3300047471 | Ga0495684_0000601 | Ga0495684_0000601_7190_8650 | 468 |
| 170 | 3300048909 | Ga0496106_0181713 | Ga0496106_0181713_135_1574 | 468 |
| 171 | 3300050489 | nmdc:mga03683_1585_c1 | nmdc:mga03683_1585_c1_4146_5591 | 468 |
| 172 | 3300050491 | nmdc:mga00v17_114706_c1 | nmdc:mga00v17_114706_c1_62_1519 | 468 |
| 173 | 3300050491 | nmdc:mga00v17_2954_c1 | nmdc:mga00v17_2954_c1_6199_7644 | 468 |
| 174 | 3300050491 | nmdc:mga00v17_53995_c1 | nmdc:mga00v17_53995_c1_834_2279 | 468 |
| 175 | 3300050493 | nmdc:mga0k408_3615_c1 | nmdc:mga0k408_3615_c1_2389_3834 | 468 |
| 176 | 3300050493 | nmdc:mga0k408_6304_c1 | nmdc:mga0k408_6304_c1_2652_4169 | 468 |
| 177 | 3300050494 | nmdc:mga06z11_49452_c1 | nmdc:mga06z11_49452_c1_41_1558 | 468 |
| 178 | 3300050494 | nmdc:mga06z11_61928_c1 | nmdc:mga06z11_61928_c1_471_1916 | 468 |
| 179 | 3300050494 | nmdc:mga06z11_8309_c1 | nmdc:mga06z11_8309_c1_727_2172 | 468 |
| 180 | 3300050495 | nmdc:mga04h51_18403_c1 | nmdc:mga04h51_18403_c1_463_1908 | 468 |
| 181 | 3300050496 | nmdc:mga07m45_11668_c1 | nmdc:mga07m45_11668_c1_895_2340 | 468 |
| 182 | 3300050496 | nmdc:mga07m45_13198_c1 | nmdc:mga07m45_13198_c1_1429_2946 | 468 |
| 183 | 3300050513 | nmdc:mga0rr50_79641_c1 | nmdc:mga0rr50_79641_c1_1050_2489 | 468 |
| 184 | 3300053085 | Ga0495619_0000386 | Ga0495619_0000386_16045_17505 | 468 |
| 185 | 3300053085 | Ga0495619_0016742 | Ga0495619_0016742_2449_3909 | 468 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3ip4-assembly1.cif.gz_A | the high resolution structure of gatcab | 0.9654 | 6 | 456 |
| 4wj3-assembly2.cif.gz_D | crystal structure of the asparagine transamidosome from pseudomonas aeruginosa | 0.9636 | 6 | 456 |
| 3h0r-assembly7.cif.gz_S | structure of trna-dependent amidotransferase gatcab from aquifex aeolicus | 0.9604 | 5 | 456 |
| 3kfu-assembly1.cif.gz_H | crystal structure of the transamidosome | 0.9431 | 7 | 461 |
| 3ip4-assembly1.cif.gz_A | the high resolution structure of gatcab | 0.935 | 6 | 456 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 4wj3D00 | Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain | 0.9636 | 6 | 456 | 3.90.1300.10 |
| 2dqnA00 | Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain | 0.9616 | 6 | 456 | 3.90.1300.10 |
| af_Q9LI77_43_527_3.90.1300.10 | Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain | 0.9596 | 11 | 460 | 3.90.1300.10 |
| af_Q5FWT5_3_499_3.90.1300.10 | Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain | 0.9452 | 4 | 460 | 3.90.1300.10 |
| 3kfuH00 | Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain | 0.9431 | 7 | 461 | 3.90.1300.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A7C6WBK3-F1-model_v4 | Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA (EC 6.3.5.7) | 0.9727 | 6 | 252 |
GO:0016740
GO:0050567 |
| AF-A0A7X5CPT5-F1-model_v4 | deleted | 0.9711 | 6 | 463 |
|
| AF-R9MBH4-F1-model_v4 | Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) (EC 6.3.5.7) | 0.971 | 3 | 463 |
GO:0005524
GO:0006412 GO:0016740 GO:0030956 GO:0050567 |
| AF-A0A3M1YMC4-F1-model_v4 | Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) (EC 6.3.5.7) | 0.9706 | 6 | 455 |
GO:0005524
GO:0006412 GO:0016740 GO:0030956 GO:0050567 |
| AF-A0A6F9WRK1-F1-model_v4 | Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) (EC 6.3.5.7) | 0.9706 | 6 | 455 |
GO:0005524
GO:0006412 GO:0016740 GO:0030956 GO:0050567 |
Predicted Structure (AlphaFold2)
Powered by PDBe Molstar