F284020

General Info

Members Datasets Scaffolds Average Seq Length
185 103 370 503

Family's Representative Sequence

Representative Sequence 3300005577|Ga0068857_100002919|Ga0068857_10000291910
Length 557
Sequence MSFTYIASGGDWIRILPLLILAGMGLLTLLADLLLPQGVKARLALEKLPGASIPFSYLLLPLLSLIGLAGALAASIFLWATGDHHTAFNGMLASDPGTMFAFIIIICSAILAVLLSPGYIKRQEIIHQGEYYALTIFATIGMMILAAAQSFLMVFVGIELLSLALYILCGYIARRQTSQESGMKYFLLSSFASAFLLYGLAMIYGATGQTQYSAVFSFLQTHHQASTLLLIGMGLLTVGFAFKVSAVPFQAWTPDVYQGAPAPVTAFMSVGTKAAALIAFARVFTIVLAPVHADWMPAVWAITILTIVGGNIMALVQKDVKRMLAYSGIAHAGYLLIGIVVGASDKALGLSAILFYLLCYLFLNIGAFGVVAVLERQDNSGTAAADLRGLWRRQPVLAGLLALFLFGLAGFPPMAGFAAKYYIFYAALVSGHPELLIIGVLASILGMYYYLRPIATMFMEREVTVPATPSRISGPLPTDGRSTSSTGGTATAVAAKPATIPQTKAAALVEDDPAEEKVPTAWPTKVALTLALLGALAMGTVLPLWLIQLAQQAAHFM

Samples

Sample ID Description Type Environment
1 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
7 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
11 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
12 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
13 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
16 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
17 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
18 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
21 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
22 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
23 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
26 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
27 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
28 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
29 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
30 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
31 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
32 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
33 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
34 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
35 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
36 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
37 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
38 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
39 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
40 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
41 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
43 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
44 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
45 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
46 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
47 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
48 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
49 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
50 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
51 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
70 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
71 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
72 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
73 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
74 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
75 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
76 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
77 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
78 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
79 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
80 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
81 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
82 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
83 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
84 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
85 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
86 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
87 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
88 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
89 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
90 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
91 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
92 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
93 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
94 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
95 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
96 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
97 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
98 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
99 2738543012 Acidovorax sp. CF301 Isolate Unclassified
100 2855730933 Achromobacter sp. HZ28 Isolate Nodule
101 2855767633 Achromobacter sp. HZ34 Isolate Nodule
102 2881412998 Achromobacter aloeverae AVA-1 Isolate Unclassified
103 2932422444 Comamonas sp. 4034 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.76
Metatranscriptomes 0.54
Isolates 2.7

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.78
Nodule 1.08
Rhizoplane 5.95
Rhizosphere 88.11
Stem 0
Stem Tuber 0
Unclassified 1.62

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068857_100002919 3300005577 Bacteria 14091
2 JGI25151J46595_10000252 3300003187 Bacteria 62814
3 JGI25151J46595_10000664 3300003187 Bacteria 29294
4 Ga0070683_100001068 3300005329 Bacteria 20563
5 Ga0070683_100003870 3300005329 Bacteria 12239
6 Ga0070680_100118296 3300005336 Bacteria 2210
7 Ga0068868_100007018 3300005338 Bacteria 8003
8 Ga0070691_10007899 3300005341 Bacteria 4865
9 Ga0070703_10012122 3300005406 Bacteria 2441
10 Ga0070714_100007114 3300005435 Bacteria 8679
11 Ga0070714_100062683 3300005435 Bacteria 3195
12 Ga0070713_100001843 3300005436 Bacteria 13670
13 Ga0070705_100094164 3300005440 Bacteria 1875
14 Ga0070700_100000631 3300005441 Bacteria 17489
15 Ga0070694_100079032 3300005444 Bacteria 2283
16 Ga0070708_100000008 3300005445 Bacteria 146021
17 Ga0070708_100009862 3300005445 Bacteria 7716
18 Ga0070708_100022614 3300005445 Bacteria 5334
19 Ga0070681_10057707 3300005458 Bacteria 3862
20 Ga0070706_100000157 3300005467 Bacteria 86485
21 Ga0070706_100000288 3300005467 Bacteria 61178
22 Ga0070706_100000448 3300005467 Bacteria 49282
23 Ga0070706_100001383 3300005467 Bacteria 25747
24 Ga0070706_100001738 3300005467 Bacteria 22580
25 Ga0070706_100001820 3300005467 Bacteria 22097
26 Ga0070706_100006377 3300005467 Bacteria 11142
27 Ga0070706_100042471 3300005467 Bacteria 4201
28 Ga0070706_100063054 3300005467 Bacteria 3425
29 Ga0070706_100078811 3300005467 Bacteria 3050
30 Ga0070706_100092881 3300005467 Bacteria 2800
31 Ga0070707_100000004 3300005468 Bacteria 265003
32 Ga0070707_100001048 3300005468 Bacteria 27384
33 Ga0070707_100001614 3300005468 Bacteria 21842
34 Ga0070707_100003251 3300005468 Bacteria 15402
35 Ga0070707_100022823 3300005468 Bacteria 5917
36 Ga0070707_100024747 3300005468 Bacteria 5690
37 Ga0070707_100045473 3300005468 Bacteria 4202
38 Ga0070698_100003937 3300005471 Bacteria 16326
39 Ga0070698_100011124 3300005471 Bacteria 9558
40 Ga0070698_100014098 3300005471 Bacteria 8452
41 Ga0070698_100016025 3300005471 Bacteria 7915
42 Ga0070698_100053091 3300005471 Bacteria 4120
43 Ga0070698_100057757 3300005471 Bacteria 3925
44 Ga0070699_100000006 3300005518 Bacteria 363492
45 Ga0070699_100000118 3300005518 Bacteria 72787
46 Ga0070699_100000220 3300005518 Bacteria 56957
47 Ga0070699_100001853 3300005518 Bacteria 19179
48 Ga0070699_100002659 3300005518 Bacteria 15959
49 Ga0070699_100010112 3300005518 Bacteria 8168
50 Ga0070699_100030086 3300005518 Bacteria 4686
51 Ga0070699_100074542 3300005518 Bacteria 2953
52 Ga0070684_100000888 3300005535 Bacteria 21145
53 Ga0070684_100001176 3300005535 Bacteria 18794
54 Ga0070697_100000007 3300005536 Bacteria 197603
55 Ga0070697_100005773 3300005536 Bacteria 9542
56 Ga0070697_100010161 3300005536 Bacteria 7345
57 Ga0070697_100013259 3300005536 Bacteria 6464
58 Ga0070697_100023536 3300005536 Bacteria 4897
59 Ga0070672_100137208 3300005543 Bacteria 2015
60 Ga0070695_100008054 3300005545 Bacteria 6246
61 Ga0070664_100030382 3300005564 Bacteria 4508
62 Ga0068857_100000398 3300005577 Bacteria 30469
63 Ga0068856_100003473 3300005614 Bacteria 15923
64 Ga0068856_100031129 3300005614 Bacteria 5219
65 Ga0068852_100017280 3300005616 Bacteria 5656
66 Ga0068864_100021842 3300005618 Bacteria 5364
67 Ga0068863_100156765 3300005841 Bacteria 2180
68 Ga0068860_100157791 3300005843 Bacteria 2187
69 Ga0081538_10000179 3300005981 Bacteria 69107
70 Ga0081538_10000620 3300005981 Bacteria 39464
71 Ga0081538_10000684 3300005981 Bacteria 37245
72 Ga0081538_10009413 3300005981 Bacteria 8160
73 Ga0081539_10001045 3300005985 Bacteria 50690
74 Ga0070717_10000093 3300006028 Bacteria 70046
75 Ga0070717_10000326 3300006028 Bacteria 30990
76 Ga0070717_10014389 3300006028 Bacteria 6087
77 Ga0070717_10159298 3300006028 Bacteria 1957
78 Ga0070712_100035386 3300006175 Bacteria 3390
79 Ga0075428_100033689 3300006844 Bacteria 5653
80 Ga0075430_100002044 3300006846 Bacteria 16633
81 Ga0075431_100010863 3300006847 Bacteria 9160
82 Ga0075431_100070898 3300006847 Bacteria 3595
83 Ga0075431_100172685 3300006847 Bacteria 2221
84 Ga0075433_10001701 3300006852 Bacteria 16416
85 Ga0068865_100082709 3300006881 Bacteria 2309
86 Ga0075436_100003706 3300006914 Bacteria 10472
87 Ga0075436_100074429 3300006914 Bacteria 2351
88 Ga0075436_100075459 3300006914 Bacteria 2335
89 Ga0075435_100023796 3300007076 Bacteria 4744
90 Ga0099794_10000242 3300007265 Bacteria 19124
91 Ga0111539_10040779 3300009094 Bacteria 5586
92 Ga0111539_10047205 3300009094 Bacteria 5148
93 Ga0105245_10003629 3300009098 Bacteria 13776
94 Ga0105243_10100665 3300009148 Bacteria 2398
95 Ga0105238_10167566 3300009551 Bacteria 2173
96 Ga0157369_10016489 3300013105 Bacteria 8309
97 Ga0157374_10008065 3300013296 Bacteria 9004
98 Ga0157372_10042438 3300013307 Bacteria 5031
99 Ga0157372_10097585 3300013307 Bacteria 3351
100 Ga0157372_10237178 3300013307 Bacteria 2116
101 Ga0157377_10005788 3300014745 Bacteria 5837
102 Ga0224712_10000054 3300022467 Bacteria 17217
103 Ga0209025_1000193 3300025294 Bacteria 149339
104 Ga0207688_10000979 3300025901 Bacteria 14558
105 Ga0207699_10021283 3300025906 Bacteria 3493
106 Ga0207705_10061275 3300025909 Bacteria 2718
107 Ga0207684_10000005 3300025910 Bacteria 736617
108 Ga0207684_10000014 3300025910 Bacteria 440027
109 Ga0207684_10000027 3300025910 Bacteria 313272
110 Ga0207684_10000034 3300025910 Bacteria 291009
111 Ga0207684_10000183 3300025910 Bacteria 100388
112 Ga0207684_10000212 3300025910 Bacteria 89645
113 Ga0207684_10000522 3300025910 Bacteria 47590
114 Ga0207684_10001453 3300025910 Bacteria 25551
115 Ga0207684_10010279 3300025910 Bacteria 8237
116 Ga0207684_10017274 3300025910 Bacteria 6189
117 Ga0207684_10024810 3300025910 Bacteria 5110
118 Ga0207657_10018625 3300025919 Bacteria 6619
119 Ga0207649_10011314 3300025920 Bacteria 4917
120 Ga0207646_10000018 3300025922 Bacteria 291009
121 Ga0207646_10000092 3300025922 Bacteria 120151
122 Ga0207646_10000111 3300025922 Bacteria 112089
123 Ga0207646_10000119 3300025922 Bacteria 107784
124 Ga0207646_10000395 3300025922 Bacteria 58592
125 Ga0207646_10000682 3300025922 Bacteria 44027
126 Ga0207646_10003471 3300025922 Bacteria 17799
127 Ga0207646_10009428 3300025922 Bacteria 9650
128 Ga0207646_10014687 3300025922 Bacteria 7419
129 Ga0207646_10022475 3300025922 Bacteria 5810
130 Ga0207646_10064131 3300025922 Bacteria 3279
131 Ga0207646_10094657 3300025922 Bacteria 2675
132 Ga0207700_10000457 3300025928 Bacteria 23940
133 Ga0207700_10183502 3300025928 Bacteria 1754
134 Ga0207664_10008571 3300025929 Bacteria 7143
135 Ga0207664_10139080 3300025929 Bacteria 2052
136 Ga0207704_10087669 3300025938 Bacteria 2033
137 Ga0207691_10101368 3300025940 Bacteria 2569
138 Ga0207679_10142619 3300025945 Bacteria 1938
139 Ga0207708_10000604 3300026075 Bacteria 27706
140 Ga0207702_10005598 3300026078 Bacteria 10966
141 Ga0207702_10025647 3300026078 Bacteria 4893
142 Ga0207641_10079928 3300026088 Bacteria 2836
143 Ga0207676_10015517 3300026095 Bacteria 5497
144 Ga0207674_10000027 3300026116 Bacteria 150200
145 Ga0207674_10006339 3300026116 Bacteria 13927
146 Ga0207698_10010850 3300026142 Bacteria 5879
147 Ga0265338_10054806 3300028800 Bacteria 3552
148 Ga0265340_10038805 3300031247 Unclassified 2354
149 Ga0373954_0003292 3300035118 Bacteria 6821
150 Ga0373956_0001597 3300035119 Bacteria 9349
151 Ga0373955_0008792 3300035172 Bacteria 4705
152 Ga0373927_0000338 3300035695 Bacteria 36783
153 Ga0373933_0041858 3300035724 Unclassified 2706
154 Ga0373937_0149937 3300036401 Bacteria 2184
155 Ga0373937_0276589 3300036401 Unclassified 1585
156 Ga0395905_0104731 3300037471 Bacteria 2656
157 Ga0496102_0037199 3300048905 Bacteria 4389
158 Ga0496104_0003288 3300048907 Bacteria 13948
159 Ga0496105_0008339 3300048908 Bacteria 8051
160 Ga0496108_0007232 3300048911 Bacteria 8997
161 Ga0496109_0106934 3300048912 Bacteria 2598
162 Ga0496110_0047079 3300048913 Bacteria 3774
163 Ga0496111_0005147 3300048914 Bacteria 8338
164 Ga0496112_0008940 3300048915 Bacteria 8994
165 Ga0496112_0041487 3300048915 Bacteria 4503
166 Ga0496113_0010392 3300048916 Bacteria 6153
167 Ga0496115_0026456 3300048918 Bacteria 4528
168 Ga0501069_0049845 3300049585 Bacteria 2328
169 nmdc:mga09592_29314_c1 3300050508 Bacteria 4577
170 nmdc:mga06r32_156628_c1 3300050510 Bacteria 2259
171 nmdc:mga08y16_73402_c1 3300050511 Bacteria 3565
172 nmdc:mga0rr50_62591_c1 3300050513 Bacteria 2808
173 nmdc:mga08x19_11920_c1 3300050514 Bacteria 5231
174 nmdc:mga08x19_7402_c1 3300050514 Bacteria 6519
175 nmdc:mga0a205_195_c1 3300050515 Bacteria 41967
176 nmdc:mga0a205_95837_c1 3300050515 Bacteria 2866
177 Ga0500556_0000262 3300053104 Bacteria 41714
178 Ga0500600_0069081 3300053149 Bacteria 1943
179 Ga0500616_0003982 3300053153 Bacteria 10800
180 Ga0500634_0037327 3300053161 Bacteria 2643
181 2739241369 2738543012 Bacteria 7115078
182 2855737101 2855730933 Bacteria 7047938
183 2855767811 2855767633 Bacteria 7049357
184 2881416642 2881412998 Bacteria 6492157
185 2932424554 2932422444 Bacteria 4678430
186 Ga0068857_100002919
187 JGI25151J46595_10000252
188 JGI25151J46595_10000664
189 Ga0070683_100001068
190 Ga0070683_100003870
191 Ga0070680_100118296
192 Ga0068868_100007018
193 Ga0070691_10007899
194 Ga0070703_10012122
195 Ga0070714_100007114
196 Ga0070714_100062683
197 Ga0070713_100001843
198 Ga0070705_100094164
199 Ga0070700_100000631
200 Ga0070694_100079032
201 Ga0070708_100000008
202 Ga0070708_100009862
203 Ga0070708_100022614
204 Ga0070681_10057707
205 Ga0070706_100000157
206 Ga0070706_100000288
207 Ga0070706_100000448
208 Ga0070706_100001383
209 Ga0070706_100001738
210 Ga0070706_100001820
211 Ga0070706_100006377
212 Ga0070706_100042471
213 Ga0070706_100063054
214 Ga0070706_100078811
215 Ga0070706_100092881
216 Ga0070707_100000004
217 Ga0070707_100001048
218 Ga0070707_100001614
219 Ga0070707_100003251
220 Ga0070707_100022823
221 Ga0070707_100024747
222 Ga0070707_100045473
223 Ga0070698_100003937
224 Ga0070698_100011124
225 Ga0070698_100014098
226 Ga0070698_100016025
227 Ga0070698_100053091
228 Ga0070698_100057757
229 Ga0070699_100000006
230 Ga0070699_100000118
231 Ga0070699_100000220
232 Ga0070699_100001853
233 Ga0070699_100002659
234 Ga0070699_100010112
235 Ga0070699_100030086
236 Ga0070699_100074542
237 Ga0070684_100000888
238 Ga0070684_100001176
239 Ga0070697_100000007
240 Ga0070697_100005773
241 Ga0070697_100010161
242 Ga0070697_100013259
243 Ga0070697_100023536
244 Ga0070672_100137208
245 Ga0070695_100008054
246 Ga0070664_100030382
247 Ga0068857_100000398
248 Ga0068856_100003473
249 Ga0068856_100031129
250 Ga0068852_100017280
251 Ga0068864_100021842
252 Ga0068863_100156765
253 Ga0068860_100157791
254 Ga0081538_10000179
255 Ga0081538_10000620
256 Ga0081538_10000684
257 Ga0081538_10009413
258 Ga0081539_10001045
259 Ga0070717_10000093
260 Ga0070717_10000326
261 Ga0070717_10014389
262 Ga0070717_10159298
263 Ga0070712_100035386
264 Ga0075428_100033689
265 Ga0075430_100002044
266 Ga0075431_100010863
267 Ga0075431_100070898
268 Ga0075431_100172685
269 Ga0075433_10001701
270 Ga0068865_100082709
271 Ga0075436_100003706
272 Ga0075436_100074429
273 Ga0075436_100075459
274 Ga0075435_100023796
275 Ga0099794_10000242
276 Ga0111539_10040779
277 Ga0111539_10047205
278 Ga0105245_10003629
279 Ga0105243_10100665
280 Ga0105238_10167566
281 Ga0157369_10016489
282 Ga0157374_10008065
283 Ga0157372_10042438
284 Ga0157372_10097585
285 Ga0157372_10237178
286 Ga0157377_10005788
287 Ga0224712_10000054
288 Ga0209025_1000193
289 Ga0207688_10000979
290 Ga0207699_10021283
291 Ga0207705_10061275
292 Ga0207684_10000005
293 Ga0207684_10000014
294 Ga0207684_10000027
295 Ga0207684_10000034
296 Ga0207684_10000183
297 Ga0207684_10000212
298 Ga0207684_10000522
299 Ga0207684_10001453
300 Ga0207684_10010279
301 Ga0207684_10017274
302 Ga0207684_10024810
303 Ga0207657_10018625
304 Ga0207649_10011314
305 Ga0207646_10000018
306 Ga0207646_10000092
307 Ga0207646_10000111
308 Ga0207646_10000119
309 Ga0207646_10000395
310 Ga0207646_10000682
311 Ga0207646_10003471
312 Ga0207646_10009428
313 Ga0207646_10014687
314 Ga0207646_10022475
315 Ga0207646_10064131
316 Ga0207646_10094657
317 Ga0207700_10000457
318 Ga0207700_10183502
319 Ga0207664_10008571
320 Ga0207664_10139080
321 Ga0207704_10087669
322 Ga0207691_10101368
323 Ga0207679_10142619
324 Ga0207708_10000604
325 Ga0207702_10005598
326 Ga0207702_10025647
327 Ga0207641_10079928
328 Ga0207676_10015517
329 Ga0207674_10000027
330 Ga0207674_10006339
331 Ga0207698_10010850
332 Ga0265338_10054806
333 Ga0265340_10038805
334 Ga0373954_0003292
335 Ga0373956_0001597
336 Ga0373955_0008792
337 Ga0373927_0000338
338 Ga0373933_0041858
339 Ga0373937_0149937
340 Ga0373937_0276589
341 Ga0395905_0104731
342 Ga0496102_0037199
343 Ga0496104_0003288
344 Ga0496105_0008339
345 Ga0496108_0007232
346 Ga0496109_0106934
347 Ga0496110_0047079
348 Ga0496111_0005147
349 Ga0496112_0008940
350 Ga0496112_0041487
351 Ga0496113_0010392
352 Ga0496115_0026456
353 Ga0501069_0049845
354 nmdc:mga09592_29314_c1
355 nmdc:mga06r32_156628_c1
356 nmdc:mga08y16_73402_c1
357 nmdc:mga0rr50_62591_c1
358 nmdc:mga08x19_11920_c1
359 nmdc:mga08x19_7402_c1
360 nmdc:mga0a205_195_c1
361 nmdc:mga0a205_95837_c1
362 Ga0500556_0000262
363 Ga0500600_0069081
364 Ga0500616_0003982
365 Ga0500634_0037327
366 2739241369
367 2855737101
368 2855767811
369 2881416642
370 2932424554

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00361

Proton_antipo_M

Proton-conducting membrane transporter

148

446

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
3rko-assembly2.cif.gz_D crystal structure of the membrane domain of respiratory complex i from e. coli at 3.0 angstrom resolution 0.9538 1 482
7nyh-assembly1.cif.gz_N respiratory complex i from escherichia coli - focused refinement of membrane arm 0.9503 1 485
7z7s-assembly1.cif.gz_N complex i from e. coli, lmng-purified, under turnover at ph 6, closed state 0.9483 1 488
7z7v-assembly1.cif.gz_N complex i from e. coli, lmng-purified, under turnover at ph 6, open-ready state 0.9466 1 488
6i0d-assembly1.cif.gz_N respiratory complex i from thermus thermophilus with bound decyl-ubiquinone 0.9455 12 482
ID Description Score Start End Superfamily
af_P0CC63_1_145_1.10.287.3510 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.9412 5 121 1.10.287.3510
af_O05000_1_141_1.10.287.3510 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.8261 6 125 1.10.287.3510
af_P0CC63_1_145_1.10.287.3510 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.7486 5 121 1.10.287.3510
af_M1FQK6_1_136_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.7074 10 118 1.20.1070.10
af_O05000_1_141_1.10.287.3510 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.7035 6 125 1.10.287.3510
ID Description Score Start End GO Terms
AF-A0A661DNT4-F1-model_v4 NADH:ubiquinone oxidoreductase subunit N 0.9904 227 486 GO:0012505
GO:0016020
AF-A0A447T7U0-F1-model_v4 NADH-quinone oxidoreductase subunit N (EC 7.1.1.-) (NADH dehydrogenase I subunit N) (NDH-1 subunit N) 0.989 12 491 GO:0005886
GO:0008137
GO:0012505
GO:0042773
GO:0048038
GO:0050136
AF-A0A661DNT4-F1-model_v4 NADH:ubiquinone oxidoreductase subunit N 0.9827 227 486 GO:0012505
GO:0016020
AF-A0A3M0YKQ8-F1-model_v4 NADH-quinone oxidoreductase subunit NuoN (EC 1.6.5.11) 0.9814 7 455 GO:0008137
GO:0012505
GO:0016020
GO:0042773
AF-A0A447T7U0-F1-model_v4 NADH-quinone oxidoreductase subunit N (EC 7.1.1.-) (NADH dehydrogenase I subunit N) (NDH-1 subunit N) 0.9807 12 491 GO:0005886
GO:0008137
GO:0012505
GO:0042773
GO:0048038
GO:0050136

Map