F283432

General Info

Members Datasets Scaffolds Average Seq Length
184 141 368 483

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2643221575|2643888657
Length 493
Sequence EYAPAPESRAILNLRDEYGLFIDGEFVAGRGTPFATISPADESHIAMISSANDADVATAVAAARRAYDTTWSKMSGRDRGKYLFRIARLVQERARELAVAESLDNGKPIKESRDVDVPLVAAWFFYYAGWADKLDFAGVGANPRALGVAGQIIPWNFPLLMLAWKIAPALAAGNTVVLKPAETTPLSALLFAEILQQADLPPGVVNIITGAGDTGAALVGADIDKVAFTGSTGVGRAIAKQIAGTGKKVTLELGGKAANIVFDDAPIDQAIEGIVNGIFFNQGHVCCAGSRLLVQESIHDEVVDRLKERLSTLRLGDPLDKNTDIGAINSAEQLERIRTLSAVGEAEGAERWSPDCVIPDNGFWFAPTIFTNVETSHRIAREEVFGPVLSVLSFRTPAEAIAKANNTPYGLSAGIWTDKGSRILAVADKLRAGVIWANTFNRFDPASPFGGYKESGYGREGGKHGLAAYLAPASAAASLTARNAGTTKKAVTK

Samples

Sample ID Description Type Environment
1 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
2 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
3 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
9 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
10 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
11 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
12 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
13 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
14 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
17 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
18 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
19 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
20 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
21 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
22 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
23 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
24 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
25 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
26 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
27 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
28 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
29 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
31 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
32 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
33 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
34 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
35 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
36 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
44 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
45 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
46 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
47 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
48 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
49 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
50 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
51 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
52 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
53 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
54 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
55 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
56 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
57 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
58 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
59 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
60 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
61 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
62 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
63 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
64 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
65 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
66 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
67 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
68 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
69 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
70 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
71 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
72 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
73 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
74 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
75 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
76 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
77 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
78 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
79 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
80 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
81 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
82 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
83 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
84 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
85 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
86 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
88 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
89 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
90 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
92 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
93 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
94 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
95 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
96 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
97 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
98 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
99 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
100 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
101 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
102 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
103 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
104 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
105 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
106 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
107 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
108 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
109 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
110 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
111 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
112 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
113 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
114 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
115 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
116 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
117 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
118 2643221575 Microbacterium sp. Root61 Isolate Unclassified
119 2643221649 Leifsonia sp. Root4 Isolate Unclassified
120 2643221961 Aeromicrobium sp. Root236 Isolate Unclassified
121 2643221962 Aeromicrobium sp. Root344 Isolate Unclassified
122 2767802112 Streptomyces avicenniae NRRL B-24776 Isolate Rhizosphere
123 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
124 2795385470 Labedaea rhizosphaerae DSM 45361 Isolate Rhizosphere
125 2811994882 Terrabacter sp. SLBN-196 Isolate Unclassified
126 2852643534 Leifsonia sp. AK011 Isolate Rhizosphere
127 2857733635 Salinibacterium sp. R-73062 Isolate Unclassified
128 2863067949 Saccharopolyspora phatthalungensis DSM 45584 (Annotation) (version 2) Isolate Rhizosphere
129 2867369537 Streptomyces sp. Z26 Isolate Unclassified
130 2867475112 Streptomyces sp. TM32 Isolate Unclassified
131 2899370129 Amycolatopsis alkalitolerans SYSUP0005 Isolate Stem Tuber
132 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
133 2946041624 Microbacterium natoriense W4I9-1 Isolate Rhizosphere
134 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
135 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
136 8004212874 Microbacterium sp. NC79 Isolate Rhizosphere
137 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere
138 8055172936 Sphaerisporangium perillae NEAU-ZS1 Isolate Unclassified
139 8056207758 Saccharopolyspora indica KCTC 29208 Isolate Rhizosphere
140 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere
141 8057345674 Herbiconiux aconitum CPCC 205763 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 86.96
Metatranscriptomes 0
Isolates 13.04

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.72
Nodule 0
Rhizoplane 9.24
Rhizosphere 77.17
Stem 0
Stem Tuber 0.54
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24737J22298_10013670 3300001990 Bacteria 2639
2 JGI25160J50197_1005091 3300003354 Bacteria 5537
3 Ga0070676_10083862 3300005328 Bacteria 1939
4 Ga0070683_100001419 3300005329 Bacteria 18396
5 Ga0070682_100010772 3300005337 Bacteria 5199
6 Ga0070687_100007279 3300005343 Bacteria 4602
7 Ga0070713_100024127 3300005436 Bacteria 4733
8 Ga0070701_10005418 3300005438 Bacteria 5267
9 Ga0070705_100068350 3300005440 Bacteria 2138
10 Ga0070708_100000373 3300005445 Bacteria 33889
11 Ga0070708_100005873 3300005445 Bacteria 9746
12 Ga0070708_100041232 3300005445 Bacteria 4047
13 Ga0070678_100086666 3300005456 Bacteria 2390
14 Ga0070685_10039934 3300005466 Bacteria 2668
15 Ga0070706_100037437 3300005467 Bacteria 4481
16 Ga0070706_100050184 3300005467 Bacteria 3850
17 Ga0070707_100011957 3300005468 Bacteria 8099
18 Ga0070698_100085526 3300005471 Bacteria 3141
19 Ga0070684_100001579 3300005535 Bacteria 16458
20 Ga0068857_100009368 3300005577 Bacteria 8501
21 Ga0068858_100081019 3300005842 Bacteria 3017
22 Ga0081455_10000082 3300005937 Bacteria 103704
23 Ga0081455_10001095 3300005937 Bacteria 33996
24 Ga0081538_10001977 3300005981 Bacteria 20499
25 Ga0081538_10031821 3300005981 Bacteria 3549
26 Ga0081540_1012917 3300005983 Bacteria 5459
27 Ga0075428_100000669 3300006844 Bacteria 35178
28 Ga0075428_100001171 3300006844 Bacteria 28061
29 Ga0075430_100003905 3300006846 Bacteria 12567
30 Ga0075430_100020627 3300006846 Bacteria 5605
31 Ga0075431_100000513 3300006847 Bacteria 32457
32 Ga0075431_100022199 3300006847 Bacteria 6490
33 Ga0075434_100135759 3300006871 Bacteria 2479
34 Ga0075429_100005589 3300006880 Bacteria 10838
35 Ga0075429_100012802 3300006880 Bacteria 7276
36 Ga0075429_100023581 3300006880 Bacteria 5340
37 Ga0075435_100007070 3300007076 Bacteria 7967
38 Ga0105240_10152575 3300009093 Bacteria 2750
39 Ga0114129_10000001 3300009147 Bacteria 292978
40 Ga0114129_10000201 3300009147 Bacteria 66395
41 Ga0105239_10101992 3300010375 Bacteria 3175
42 Ga0105239_10139862 3300010375 Bacteria 2697
43 Ga0105246_10002791 3300011119 Bacteria 10572
44 Ga0157369_10083180 3300013105 Bacteria 3424
45 Ga0157380_10000027 3300014326 Bacteria 101082
46 Ga0163161_10006394 3300017792 Bacteria 8158
47 Ga0213876_10002754 3300021384 Bacteria 10234
48 Ga0207647_10037885 3300025904 Bacteria 3053
49 Ga0207646_10013135 3300025922 Bacteria 7927
50 Ga0207687_10009035 3300025927 Bacteria 6513
51 Ga0207690_10017354 3300025932 Bacteria 4392
52 Ga0207690_10024054 3300025932 Bacteria 3811
53 Ga0207661_10009525 3300025944 Bacteria 6972
54 Ga0207678_10000823 3300026067 Bacteria 28436
55 Ga0207674_10005483 3300026116 Bacteria 15069
56 Ga0307515_10047412 3300028794 Bacteria 6532
57 Ga0265338_10028796 3300028800 Bacteria 5529
58 Ga0265324_10029949 3300029957 Bacteria 1912
59 Ga0265320_10018211 3300031240 Bacteria 3874
60 Ga0265320_10055652 3300031240 Bacteria 1903
61 Ga0265325_10066780 3300031241 Bacteria 1813
62 Ga0265329_10019713 3300031242 Bacteria 2286
63 Ga0265339_10026683 3300031249 Bacteria 3306
64 Ga0307408_100052030 3300031548 Bacteria 2953
65 Ga0265313_10022785 3300031595 Bacteria 3389
66 Ga0265314_10014312 3300031711 Bacteria 6358
67 Ga0307413_10042520 3300031824 Bacteria 2671
68 Ga0307406_10010063 3300031901 Bacteria 5323
69 Ga0307406_10073360 3300031901 Bacteria 2250
70 Ga0307407_10077424 3300031903 Bacteria 2000
71 Ga0307416_100015846 3300032002 Bacteria 5220
72 Ga0307416_100064317 3300032002 Bacteria 3009
73 Ga0307414_10064024 3300032004 Bacteria 2616
74 Ga0307415_100000215 3300032126 Bacteria 25330
75 Ga0307415_100017611 3300032126 Bacteria 4287
76 Ga0307507_10018493 3300033179 Bacteria 7917
77 Ga0373951_0000089 3300035091 Bacteria 36094
78 Ga0373956_0002433 3300035119 Bacteria 7584
79 Ga0373961_0016681 3300035241 Bacteria 1894
80 Ga0373937_0100648 3300036401 Bacteria 2682
81 Ga0395899_0061539 3300037312 Bacteria 2765
82 Ga0395900_0101742 3300037418 Bacteria 2951
83 Ga0395898_0026360 3300037466 Bacteria 5850
84 Ga0436364_0687768 3300037853 Bacteria 4381
85 Ga0436365_0835555 3300039437 Bacteria 2247
86 Ga0436365_1708569 3300039437 Bacteria 7041
87 Ga0495608_0113110 3300046511 Bacteria 1744
88 Ga0495618_0022367 3300046514 Bacteria 3905
89 Ga0495618_0025606 3300046514 Bacteria 3662
90 Ga0495672_0001943 3300047320 Bacteria 19542
91 Ga0495684_0110961 3300047471 Bacteria 2069
92 Ga0496100_0078411 3300048903 Bacteria 2223
93 Ga0496100_0136015 3300048903 Bacteria 1736
94 Ga0496101_0153336 3300048904 Bacteria 1763
95 Ga0496102_0009827 3300048905 Bacteria 8226
96 Ga0496102_0089582 3300048905 Bacteria 2846
97 Ga0496104_0018355 3300048907 Bacteria 6382
98 Ga0496105_0011048 3300048908 Bacteria 7118
99 Ga0496105_0176399 3300048908 Bacteria 1750
100 Ga0496107_0017263 3300048910 Bacteria 5075
101 Ga0496108_0000019 3300048911 Bacteria 234657
102 Ga0496110_0021895 3300048913 Bacteria 5420
103 Ga0496110_0070997 3300048913 Bacteria 3086
104 Ga0496114_0004631 3300048917 Bacteria 10687
105 Ga0496114_0007621 3300048917 Bacteria 8559
106 Ga0496114_0013268 3300048917 Bacteria 6605
107 Ga0496115_0001533 3300048918 Bacteria 16580
108 Ga0496115_0026530 3300048918 Bacteria 4522
109 Ga0496126_0083098 3300048929 Bacteria 2827
110 Ga0501031_0001540 3300049568 Bacteria 14346
111 Ga0501033_0114044 3300049570 Bacteria 1965
112 Ga0501034_0037173 3300049571 Bacteria 4930
113 Ga0501036_0006725 3300049572 Bacteria 9346
114 Ga0501037_0068716 3300049573 Bacteria 2580
115 Ga0501039_0001474 3300049575 Bacteria 17299
116 Ga0501040_0002830 3300049576 Bacteria 11199
117 Ga0501041_0000649 3300049577 Bacteria 18259
118 Ga0501042_0003364 3300049578 Bacteria 10028
119 Ga0501047_0062981 3300049581 Bacteria 3578
120 Ga0501067_0003769 3300049583 Bacteria 8358
121 Ga0501067_0079145 3300049583 Bacteria 1821
122 Ga0501068_0001937 3300049584 Bacteria 11002
123 Ga0501068_0011439 3300049584 Bacteria 5013
124 Ga0501070_0000855 3300049586 Bacteria 27653
125 Ga0501070_0005977 3300049586 Bacteria 10370
126 Ga0501071_0011324 3300049587 Bacteria 6005
127 Ga0501072_0011373 3300049588 Bacteria 6802
128 Ga0501073_0001939 3300049589 Bacteria 15417
129 Ga0501073_0070418 3300049589 Bacteria 2436
130 Ga0501074_0000537 3300049590 Bacteria 23318
131 Ga0501074_0002176 3300049590 Bacteria 13584
132 Ga0501074_0021674 3300049590 Bacteria 4665
133 Ga0501075_0002773 3300049591 Bacteria 11741
134 Ga0501075_0082093 3300049591 Bacteria 2441
135 Ga0501076_0000792 3300049592 Bacteria 20438
136 Ga0501077_0013419 3300049593 Bacteria 5138
137 Ga0501077_0041366 3300049593 Bacteria 2934
138 Ga0501079_0014192 3300049741 Bacteria 6074
139 Ga0501079_0014938 3300049741 Bacteria 5919
140 Ga0501080_0001349 3300049742 Bacteria 20509
141 Ga0501080_0001967 3300049742 Bacteria 17734
142 Ga0501080_0102973 3300049742 Bacteria 2648
143 Ga0501081_0059350 3300049743 Bacteria 2648
144 Ga0501035_0103555 3300049822 Bacteria 2497
145 nmdc:mga0yw44_2474_c1 3300050492 Bacteria 7893
146 nmdc:mga05p37_14121_c1 3300050507 Bacteria 9585
147 nmdc:mga05p37_823_c1 3300050507 Bacteria 34775
148 nmdc:mga09592_11227_c1 3300050508 Bacteria 7289
149 nmdc:mga09592_16_c1 3300050508 Bacteria 97518
150 nmdc:mga09592_8181_c1 3300050508 Bacteria 8502
151 nmdc:mga0qj67_16_c1 3300050509 Bacteria 124323
152 nmdc:mga0qj67_23889_c1 3300050509 Bacteria 4708
153 nmdc:mga06r32_12345_c1 3300050510 Bacteria 7705
154 nmdc:mga06r32_493_c1 3300050510 Bacteria 34078
155 Ga0495595_0032599 3300053084 Bacteria 2347
156 Ga0500641_0000726 3300053096 Bacteria 11926
157 Ga0500593_001117 3300053117 Bacteria 9666
158 Ga0500559_0000156 3300053136 Bacteria 53941
159 Ga0501082_0001727 3300060353 Bacteria 19282
160 Ga0501082_0012199 3300060353 Bacteria 7384
161 2643888657 2643221575 Bacteria 4022601
162 2644277224 2643221649 Bacteria 3867359
163 2645720622 2643221961 Bacteria 3919167
164 2645723643 2643221962 Bacteria 3874254
165 2768643713 2767802112 Bacteria 6465194
166 2772641772 2772190715 Bacteria 6959372
167 2795781652 2795385470 Bacteria 8317180
168 2812374426 2811994882 Bacteria 4688362
169 2852645132 2852643534 Bacteria 3013378
170 2857736916 2857733635 Bacteria 3532004
171 2863070580 2863067949 Bacteria 8541735
172 2867373408 2867369537 Bacteria 6501581
173 2867477883 2867475112 Bacteria 6909112
174 2899374205 2899370129 Bacteria 6781179
175 2917737645 2917736166 Bacteria 9690793
176 2946044574 2946041624 Bacteria 4191385
177 2997458043 2997451912 Bacteria 8492419
178 2997600570 2997600082 Bacteria 9896405
179 8004214564 8004212874 Bacteria 2861420
180 8054166839 8054160619 Bacteria 7783213
181 8055178709 8055172936 Bacteria 9305943
182 8056208840 8056207758 Bacteria 8639239
183 8056670524 8056667051 Bacteria 6953971
184 8057348566 8057345674 Bacteria 4160394
185 JGI24737J22298_10013670
186 JGI25160J50197_1005091
187 Ga0070676_10083862
188 Ga0070683_100001419
189 Ga0070682_100010772
190 Ga0070687_100007279
191 Ga0070713_100024127
192 Ga0070701_10005418
193 Ga0070705_100068350
194 Ga0070708_100000373
195 Ga0070708_100005873
196 Ga0070708_100041232
197 Ga0070678_100086666
198 Ga0070685_10039934
199 Ga0070706_100037437
200 Ga0070706_100050184
201 Ga0070707_100011957
202 Ga0070698_100085526
203 Ga0070684_100001579
204 Ga0068857_100009368
205 Ga0068858_100081019
206 Ga0081455_10000082
207 Ga0081455_10001095
208 Ga0081538_10001977
209 Ga0081538_10031821
210 Ga0081540_1012917
211 Ga0075428_100000669
212 Ga0075428_100001171
213 Ga0075430_100003905
214 Ga0075430_100020627
215 Ga0075431_100000513
216 Ga0075431_100022199
217 Ga0075434_100135759
218 Ga0075429_100005589
219 Ga0075429_100012802
220 Ga0075429_100023581
221 Ga0075435_100007070
222 Ga0105240_10152575
223 Ga0114129_10000001
224 Ga0114129_10000201
225 Ga0105239_10101992
226 Ga0105239_10139862
227 Ga0105246_10002791
228 Ga0157369_10083180
229 Ga0157380_10000027
230 Ga0163161_10006394
231 Ga0213876_10002754
232 Ga0207647_10037885
233 Ga0207646_10013135
234 Ga0207687_10009035
235 Ga0207690_10017354
236 Ga0207690_10024054
237 Ga0207661_10009525
238 Ga0207678_10000823
239 Ga0207674_10005483
240 Ga0307515_10047412
241 Ga0265338_10028796
242 Ga0265324_10029949
243 Ga0265320_10018211
244 Ga0265320_10055652
245 Ga0265325_10066780
246 Ga0265329_10019713
247 Ga0265339_10026683
248 Ga0307408_100052030
249 Ga0265313_10022785
250 Ga0265314_10014312
251 Ga0307413_10042520
252 Ga0307406_10010063
253 Ga0307406_10073360
254 Ga0307407_10077424
255 Ga0307416_100015846
256 Ga0307416_100064317
257 Ga0307414_10064024
258 Ga0307415_100000215
259 Ga0307415_100017611
260 Ga0307507_10018493
261 Ga0373951_0000089
262 Ga0373956_0002433
263 Ga0373961_0016681
264 Ga0373937_0100648
265 Ga0395899_0061539
266 Ga0395900_0101742
267 Ga0395898_0026360
268 Ga0436364_0687768
269 Ga0436365_0835555
270 Ga0436365_1708569
271 Ga0495608_0113110
272 Ga0495618_0022367
273 Ga0495618_0025606
274 Ga0495672_0001943
275 Ga0495684_0110961
276 Ga0496100_0078411
277 Ga0496100_0136015
278 Ga0496101_0153336
279 Ga0496102_0009827
280 Ga0496102_0089582
281 Ga0496104_0018355
282 Ga0496105_0011048
283 Ga0496105_0176399
284 Ga0496107_0017263
285 Ga0496108_0000019
286 Ga0496110_0021895
287 Ga0496110_0070997
288 Ga0496114_0004631
289 Ga0496114_0007621
290 Ga0496114_0013268
291 Ga0496115_0001533
292 Ga0496115_0026530
293 Ga0496126_0083098
294 Ga0501031_0001540
295 Ga0501033_0114044
296 Ga0501034_0037173
297 Ga0501036_0006725
298 Ga0501037_0068716
299 Ga0501039_0001474
300 Ga0501040_0002830
301 Ga0501041_0000649
302 Ga0501042_0003364
303 Ga0501047_0062981
304 Ga0501067_0003769
305 Ga0501067_0079145
306 Ga0501068_0001937
307 Ga0501068_0011439
308 Ga0501070_0000855
309 Ga0501070_0005977
310 Ga0501071_0011324
311 Ga0501072_0011373
312 Ga0501073_0001939
313 Ga0501073_0070418
314 Ga0501074_0000537
315 Ga0501074_0002176
316 Ga0501074_0021674
317 Ga0501075_0002773
318 Ga0501075_0082093
319 Ga0501076_0000792
320 Ga0501077_0013419
321 Ga0501077_0041366
322 Ga0501079_0014192
323 Ga0501079_0014938
324 Ga0501080_0001349
325 Ga0501080_0001967
326 Ga0501080_0102973
327 Ga0501081_0059350
328 Ga0501035_0103555
329 nmdc:mga0yw44_2474_c1
330 nmdc:mga05p37_14121_c1
331 nmdc:mga05p37_823_c1
332 nmdc:mga09592_11227_c1
333 nmdc:mga09592_16_c1
334 nmdc:mga09592_8181_c1
335 nmdc:mga0qj67_16_c1
336 nmdc:mga0qj67_23889_c1
337 nmdc:mga06r32_12345_c1
338 nmdc:mga06r32_493_c1
339 Ga0495595_0032599
340 Ga0500641_0000726
341 Ga0500593_001117
342 Ga0500559_0000156
343 Ga0501082_0001727
344 Ga0501082_0012199
345 2643888657
346 2644277224
347 2645720622
348 2645723643
349 2768643713
350 2772641772
351 2795781652
352 2812374426
353 2852645132
354 2857736916
355 2863070580
356 2867373408
357 2867477883
358 2899374205
359 2917737645
360 2946044574
361 2997458043
362 2997600570
363 8004214564
364 8054166839
365 8055178709
366 8056208840
367 8056670524
368 8057348566

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00171

Aldedh

Aldehyde dehydrogenase family

26

474

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
4pxn-assembly1.cif.gz_A structure of zm aldh7 in complex with nad 0.9321 28 417
3ty7-assembly1.cif.gz_B crystal structure of aldehyde dehydrogenase family protein from staphylococcus aureus 0.9307 30 419
3rjl-assembly10.cif.gz_B crystal structure of 1-pyrroline-5-carboxylate dehydrogenase from bacillus licheniformis (target nysgrc-000337) 0.9257 27 416
5m4x-assembly1.cif.gz_A mutant glyceraldehyde dehydrogenase (f34m+y399c+s405n) from thermoplasma acidophilum 0.9242 30 419
3qan-assembly2.cif.gz_C-2 crystal structure of 1-pyrroline-5-carboxylate dehydrogenase from bacillus halodurans 0.9232 30 416
ID Description Score Start End Superfamily
af_I1KQ26_25_349_3.40.309.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9495 35 341 3.40.309.10
af_Q84LK3_9_267_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.9489 33 266 3.40.605.10
af_I1MTI7_10_220_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.9446 67 262 3.40.605.10
af_Q2FV10_3_257_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.943 32 262 3.40.605.10
af_P80668_7_277_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.9408 27 265 3.40.605.10
ID Description Score Start End GO Terms
AF-A0A6S7LBX5-F1-model_v4 Cytosolic 10-formyltetrahydrofolate dehydrogenase-like 0.9559 47 247 GO:0016491
AF-A0A833RJ80-F1-model_v4 Betaine aldehyde dehydrogenase 1 0.9559 65 218 GO:0004029
AF-A0A2J8MYN8-F1-model_v4 T0055793 isoform 1 0.9531 31 241 GO:0016491
AF-A0A1B6GWK8-F1-model_v4 formyltetrahydrofolate dehydrogenase (EC 1.5.1.6) 0.9472 31 223 GO:0006730
GO:0009058
GO:0009258
GO:0016155
AF-C2W8C0-F1-model_v4 deleted 0.9456 34 318

Map