F283266

General Info

Members Datasets Scaffolds Average Seq Length
184 134 368 342

Family's Representative Sequence

Representative Sequence 3300049568|Ga0501031_0036837|Ga0501031_0036837_1505_2515
Length 336
Sequence VGRVVLVTGVSLDLGGRFARRISADPKVERVIGVDVVPPPGDLGPVGFVRADIRNPVIAKVIAGQEVDTVVHLSVQPGPGRSSGGRSSVKEHNVIGTMQLLAACQKAPGLERLVVRSSADVYGSSSRDPAMFTEDMDGKRLPRSGFAKDVREVEGYVRGFARRRPDVAVTMLRPAALVGRREESPLTQYFKLPVVPTPLGYDARLQFLHEDDFLDALTHAAVDGVHGTFNVAGAGVLMLSQALRRLGRPTLPVPSFLLDGLGSALKQAGVPTPSRELTSYLTFGRGLDTTRMRTMLGFTPAHTTEAAFADFARWVNPGLLALPRAAAPLGTGAGHG

Samples

Sample ID Description Type Environment
1 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
2 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
10 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
11 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
12 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
13 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
14 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
15 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
16 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
17 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
18 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
19 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
20 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
21 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
22 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
23 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
24 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
25 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
26 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
27 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
28 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
29 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
30 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
31 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
32 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
48 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
49 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
50 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
51 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
52 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
53 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
54 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
55 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
56 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
57 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
58 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
59 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
60 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
61 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
62 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
63 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
64 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
65 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
66 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
67 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
68 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
69 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
70 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
71 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
72 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
73 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
74 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
75 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
76 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
77 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
78 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
79 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
80 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
81 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
82 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
83 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
84 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
85 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
86 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
87 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
88 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
89 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
90 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
91 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
92 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
93 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
94 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
95 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
96 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
97 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
98 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
99 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
100 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
101 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
102 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
103 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
104 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
105 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
106 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
108 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
109 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
110 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
111 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
112 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
113 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
114 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
115 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
116 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
117 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
118 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
120 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
121 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
122 3300059623 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 66R_SW_T2_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
123 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
124 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
125 2643221624 Phycicoccus sp. Root101 Isolate Unclassified
126 2643221711 Terrabacter sp. Root85 Isolate Unclassified
127 2808606365 Phycicoccus sp. SLBN-51 Isolate Unclassified
128 2811994882 Terrabacter sp. SLBN-196 Isolate Unclassified
129 2818991318 Humibacillus xanthopallidus SLBN-155 Isolate Unclassified
130 2818991458 Terrabacter sp. 3211 Isolate Rhizosphere
131 2818991462 Terrabacter sp. 3264 Isolate Rhizosphere
132 2818991469 Terrabacter lapilli 3265 Isolate Rhizosphere
133 2919446982 Phycicoccus sp. 3266 Isolate Rhizosphere
134 3001889506 Janibacter sp. YIM B02568 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 94.02
Metatranscriptomes 0.54
Isolates 5.43

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.54
Nodule 0
Rhizoplane 18.48
Rhizosphere 74.46
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501031_0036837 3300049568 Bacteria 3192
2 JGI24735J21928_10045219 3300002067 Bacteria 1279
3 Ga0070658_10000341 3300005327 Bacteria 40344
4 Ga0070658_10250843 3300005327 Bacteria 1501
5 Ga0070683_100156310 3300005329 Bacteria 2163
6 Ga0068869_100165420 3300005334 Bacteria 1725
7 Ga0070680_100137442 3300005336 Bacteria 2048
8 Ga0070682_100076103 3300005337 Bacteria 2160
9 Ga0070668_100065105 3300005347 Bacteria 2827
10 Ga0070705_100002777 3300005440 Bacteria 8732
11 Ga0070679_100019408 3300005530 Bacteria 6610
12 Ga0070684_100325140 3300005535 Bacteria 1413
13 Ga0070665_100284792 3300005548 Bacteria 1655
14 Ga0068857_100113912 3300005577 Bacteria 2432
15 Ga0070702_100000181 3300005615 Bacteria 20246
16 Ga0068852_100388403 3300005616 Bacteria 1370
17 Ga0068852_100489777 3300005616 Bacteria 1223
18 Ga0068858_100166070 3300005842 Bacteria 2080
19 Ga0081540_1017635 3300005983 Bacteria 4411
20 Ga0081539_10008510 3300005985 Bacteria 8909
21 Ga0081539_10026525 3300005985 Bacteria 3695
22 Ga0070717_10272013 3300006028 Bacteria 1501
23 Ga0105245_10186433 3300009098 Bacteria 1985
24 Ga0105243_10017801 3300009148 Bacteria 5376
25 Ga0105242_10205432 3300009176 Bacteria 1752
26 Ga0105238_10277780 3300009551 Bacteria 1656
27 Ga0105249_10116244 3300009553 Bacteria 2535
28 Ga0157369_10036634 3300013105 Bacteria 5373
29 Ga0157369_10139475 3300013105 Bacteria 2566
30 Ga0157369_10369926 3300013105 Bacteria 1488
31 Ga0157378_10006705 3300013297 Bacteria 10063
32 Ga0163162_10088014 3300013306 Bacteria 3185
33 Ga0163162_10106281 3300013306 Bacteria 2902
34 Ga0157372_10631900 3300013307 Bacteria 1247
35 Ga0157375_10068836 3300013308 Bacteria 3543
36 Ga0157375_10099536 3300013308 Bacteria 2987
37 Ga0163163_10244977 3300014325 Bacteria 1842
38 Ga0157380_10086798 3300014326 Bacteria 2572
39 Ga0207705_10000550 3300025909 Bacteria 31517
40 Ga0207660_10020717 3300025917 Bacteria 4418
41 Ga0207652_10087329 3300025921 Bacteria 2735
42 Ga0207659_10222893 3300025926 Bacteria 1517
43 Ga0207664_10140670 3300025929 Bacteria 2041
44 Ga0207686_10212521 3300025934 Bacteria 1391
45 Ga0207709_10025955 3300025935 Bacteria 3360
46 Ga0207709_10208672 3300025935 Bacteria 1400
47 Ga0207661_10274214 3300025944 Bacteria 1506
48 Ga0207661_10368298 3300025944 Bacteria 1299
49 Ga0207679_10192343 3300025945 Bacteria 1698
50 Ga0207668_10027135 3300025972 Bacteria 3729
51 Ga0207678_10227153 3300026067 Bacteria 1598
52 Ga0207708_10173207 3300026075 Bacteria 1710
53 Ga0207648_10238128 3300026089 Bacteria 1620
54 Ga0207674_10119080 3300026116 Bacteria 2610
55 Ga0207698_10410690 3300026142 Bacteria 1296
56 Ga0307515_10189280 3300028794 Bacteria 1975
57 Ga0307408_100069871 3300031548 Bacteria 2591
58 Ga0316575_10018087 3300031665 Bacteria 2683
59 Ga0316579_10005634 3300031691 Bacteria 5069
60 Ga0316579_10007616 3300031691 Bacteria 4480
61 Ga0316579_10115060 3300031691 Bacteria 1291
62 Ga0316576_10019256 3300031727 Bacteria 4675
63 Ga0316576_10120743 3300031727 Bacteria 1967
64 Ga0316578_10002308 3300031728 Bacteria 8298
65 Ga0316578_10040940 3300031728 Bacteria 2681
66 Ga0316578_10149611 3300031728 Bacteria 1406
67 Ga0307405_10078189 3300031731 Bacteria 2152
68 Ga0316577_10005420 3300031733 Bacteria 6692
69 Ga0316577_10113252 3300031733 Bacteria 1522
70 Ga0307413_10356558 3300031824 Bacteria 1131
71 Ga0307410_10044348 3300031852 Bacteria 2953
72 Ga0307407_10076068 3300031903 Bacteria 2015
73 Ga0307409_100009735 3300031995 Bacteria 5925
74 Ga0316583_10009472 3300032133 Bacteria 3507
75 Ga0316585_10020128 3300032137 Bacteria 2040
76 Ga0316580_10007581 3300032139 Bacteria 3234
77 Ga0316574_0014923 3300035398 Bacteria 4500
78 Ga0316574_0019679 3300035398 Bacteria 3986
79 Ga0316574_0026720 3300035398 Bacteria 3472
80 Ga0316574_0114942 3300035398 Bacteria 1726
81 Ga0316574_0139358 3300035398 Bacteria 1562
82 Ga0316582_0000470 3300036647 Bacteria 15011
83 Ga0316584_0014447 3300036712 Bacteria 5621
84 Ga0395899_0088073 3300037312 Bacteria 2253
85 Ga0395900_0055093 3300037418 Bacteria 4094
86 Ga0395898_0050443 3300037466 Bacteria 4072
87 Ga0395898_0065755 3300037466 Bacteria 3515
88 Ga0395898_0339341 3300037466 Bacteria 1433
89 Ga0395905_0132240 3300037471 Bacteria 2347
90 Ga0436364_1069800 3300037853 Bacteria 1457
91 Ga0395901_0071369 3300038443 Bacteria 3619
92 Ga0395901_0108210 3300038443 Bacteria 2918
93 Ga0395901_0228029 3300038443 Bacteria 1945
94 Ga0395901_0239804 3300038443 Bacteria 1891
95 Ga0400486_26016 3300038742 Bacteria 85615
96 Ga0451795_0457177 3300041456 Bacteria 3081
97 Ga0451833_1134538 3300041491 Bacteria 1375
98 Ga0451837_0352002 3300041494 Bacteria 1354
99 Ga0466963_0020087 3300044694 Bacteria 4199
100 Ga0466967_0107220 3300045976 Bacteria 2562
101 Ga0466967_0542183 3300045976 Bacteria 1145
102 Ga0495629_0329741 3300046459 Bacteria 1043
103 Ga0495638_0108115 3300046460 Bacteria 1655
104 Ga0495653_0199782 3300046463 Bacteria 1358
105 Ga0495653_0230210 3300046463 Bacteria 1241
106 Ga0495582_0098493 3300046473 Bacteria 1636
107 Ga0495645_0132473 3300046543 Bacteria 1746
108 Ga0495657_0148679 3300046675 Bacteria 1456
109 Ga0495647_0077908 3300046681 Bacteria 1339
110 Ga0495676_0150688 3300047321 Bacteria 1656
111 Ga0496100_0035321 3300048903 Bacteria 3143
112 Ga0496100_0186217 3300048903 Bacteria 1504
113 Ga0496101_0045513 3300048904 Bacteria 3143
114 Ga0496101_0047194 3300048904 Bacteria 3091
115 Ga0496101_0179246 3300048904 Bacteria 1631
116 Ga0496101_0192408 3300048904 Bacteria 1575
117 Ga0496101_0290441 3300048904 Bacteria 1279
118 Ga0496102_0001151 3300048905 Bacteria 24161
119 Ga0496102_0106837 3300048905 Bacteria 2605
120 Ga0496102_0126513 3300048905 Bacteria 2389
121 Ga0496103_0007369 3300048906 Bacteria 6557
122 Ga0496104_0004599 3300048907 Bacteria 12029
123 Ga0496104_0043870 3300048907 Bacteria 4200
124 Ga0496104_0067958 3300048907 Bacteria 3386
125 Ga0496104_0203325 3300048907 Bacteria 1892
126 Ga0496104_0235998 3300048907 Bacteria 1741
127 Ga0496105_0077394 3300048908 Bacteria 2747
128 Ga0496106_0160256 3300048909 Bacteria 1779
129 Ga0496106_0240665 3300048909 Bacteria 1446
130 Ga0496107_0291660 3300048910 Bacteria 1214
131 Ga0496108_0009456 3300048911 Bacteria 7896
132 Ga0496108_0132071 3300048911 Bacteria 2146
133 Ga0496109_0289602 3300048912 Bacteria 1544
134 Ga0496109_0514478 3300048912 Bacteria 1130
135 Ga0496110_0025906 3300048913 Bacteria 5015
136 Ga0496110_0192983 3300048913 Bacteria 1849
137 Ga0496111_0056335 3300048914 Bacteria 2844
138 Ga0496113_0061754 3300048916 Bacteria 2828
139 Ga0496114_0013586 3300048917 Bacteria 6531
140 Ga0496114_0143416 3300048917 Bacteria 2069
141 Ga0496114_0185176 3300048917 Bacteria 1819
142 Ga0496114_0263650 3300048917 Bacteria 1517
143 Ga0496114_0264825 3300048917 Bacteria 1514
144 Ga0496126_0145312 3300048929 Bacteria 2037
145 Ga0501031_0002516 3300049568 Bacteria 11673
146 Ga0501031_0196504 3300049568 Bacteria 1316
147 Ga0501036_0085665 3300049572 Bacteria 2663
148 Ga0501036_0086096 3300049572 Bacteria 2656
149 Ga0501038_0028363 3300049574 Bacteria 4974
150 Ga0501039_0297558 3300049575 Bacteria 1269
151 Ga0501040_0002469 3300049576 Bacteria 11909
152 Ga0501041_0018743 3300049577 Bacteria 4122
153 Ga0501042_0003898 3300049578 Bacteria 9442
154 Ga0501046_0009843 3300049580 Bacteria 8239
155 Ga0501048_0034149 3300049582 Bacteria 3672
156 Ga0501048_0131510 3300049582 Bacteria 1769
157 Ga0501068_0024501 3300049584 Bacteria 3545
158 Ga0501069_0074781 3300049585 Bacteria 1902
159 Ga0501071_0004426 3300049587 Bacteria 8912
160 Ga0501073_0118103 3300049589 Bacteria 1838
161 Ga0501074_0012890 3300049590 Bacteria 6079
162 Ga0501075_0053143 3300049591 Bacteria 3046
163 Ga0501076_0013834 3300049592 Bacteria 6056
164 Ga0501077_0039994 3300049593 Bacteria 2987
165 Ga0501080_0035668 3300049742 Bacteria 4642
166 Ga0501081_0058926 3300049743 Bacteria 2657
167 Ga0501081_0491321 3300049743 Bacteria 914
168 Ga0501035_0063018 3300049822 Bacteria 3298
169 Ga0501045_0003276 3300049824 Bacteria 11063
170 Ga0500616_0004554 3300053153 Bacteria 9816
171 Ga0501084_0001627 3300054114 Bacteria 17826
172 Ga0587101_005498 3300059623 Bacteria 1411
173 Ga0501082_0022929 3300060353 Bacteria 5379
174 Ga0530510_0029135 3300061734 Bacteria 3961
175 2644138043 2643221624 Bacteria 4384879
176 2644610362 2643221711 Bacteria 4865335
177 2808872821 2808606365 Bacteria 4301966
178 2812371752 2811994882 Bacteria 4688362
179 2819424954 2818991318 Bacteria 5266538
180 2819667328 2818991458 Bacteria 4794049
181 2819690648 2818991462 Bacteria 4320267
182 2819728043 2818991469 Bacteria 4644110
183 2919449141 2919446982 Bacteria 3994487
184 3001892237 3001889506 Bacteria 2975194
185 Ga0501031_0036837
186 JGI24735J21928_10045219
187 Ga0070658_10000341
188 Ga0070658_10250843
189 Ga0070683_100156310
190 Ga0068869_100165420
191 Ga0070680_100137442
192 Ga0070682_100076103
193 Ga0070668_100065105
194 Ga0070705_100002777
195 Ga0070679_100019408
196 Ga0070684_100325140
197 Ga0070665_100284792
198 Ga0068857_100113912
199 Ga0070702_100000181
200 Ga0068852_100388403
201 Ga0068852_100489777
202 Ga0068858_100166070
203 Ga0081540_1017635
204 Ga0081539_10008510
205 Ga0081539_10026525
206 Ga0070717_10272013
207 Ga0105245_10186433
208 Ga0105243_10017801
209 Ga0105242_10205432
210 Ga0105238_10277780
211 Ga0105249_10116244
212 Ga0157369_10036634
213 Ga0157369_10139475
214 Ga0157369_10369926
215 Ga0157378_10006705
216 Ga0163162_10088014
217 Ga0163162_10106281
218 Ga0157372_10631900
219 Ga0157375_10068836
220 Ga0157375_10099536
221 Ga0163163_10244977
222 Ga0157380_10086798
223 Ga0207705_10000550
224 Ga0207660_10020717
225 Ga0207652_10087329
226 Ga0207659_10222893
227 Ga0207664_10140670
228 Ga0207686_10212521
229 Ga0207709_10025955
230 Ga0207709_10208672
231 Ga0207661_10274214
232 Ga0207661_10368298
233 Ga0207679_10192343
234 Ga0207668_10027135
235 Ga0207678_10227153
236 Ga0207708_10173207
237 Ga0207648_10238128
238 Ga0207674_10119080
239 Ga0207698_10410690
240 Ga0307515_10189280
241 Ga0307408_100069871
242 Ga0316575_10018087
243 Ga0316579_10005634
244 Ga0316579_10007616
245 Ga0316579_10115060
246 Ga0316576_10019256
247 Ga0316576_10120743
248 Ga0316578_10002308
249 Ga0316578_10040940
250 Ga0316578_10149611
251 Ga0307405_10078189
252 Ga0316577_10005420
253 Ga0316577_10113252
254 Ga0307413_10356558
255 Ga0307410_10044348
256 Ga0307407_10076068
257 Ga0307409_100009735
258 Ga0316583_10009472
259 Ga0316585_10020128
260 Ga0316580_10007581
261 Ga0316574_0014923
262 Ga0316574_0019679
263 Ga0316574_0026720
264 Ga0316574_0114942
265 Ga0316574_0139358
266 Ga0316582_0000470
267 Ga0316584_0014447
268 Ga0395899_0088073
269 Ga0395900_0055093
270 Ga0395898_0050443
271 Ga0395898_0065755
272 Ga0395898_0339341
273 Ga0395905_0132240
274 Ga0436364_1069800
275 Ga0395901_0071369
276 Ga0395901_0108210
277 Ga0395901_0228029
278 Ga0395901_0239804
279 Ga0400486_26016
280 Ga0451795_0457177
281 Ga0451833_1134538
282 Ga0451837_0352002
283 Ga0466963_0020087
284 Ga0466967_0107220
285 Ga0466967_0542183
286 Ga0495629_0329741
287 Ga0495638_0108115
288 Ga0495653_0199782
289 Ga0495653_0230210
290 Ga0495582_0098493
291 Ga0495645_0132473
292 Ga0495657_0148679
293 Ga0495647_0077908
294 Ga0495676_0150688
295 Ga0496100_0035321
296 Ga0496100_0186217
297 Ga0496101_0045513
298 Ga0496101_0047194
299 Ga0496101_0179246
300 Ga0496101_0192408
301 Ga0496101_0290441
302 Ga0496102_0001151
303 Ga0496102_0106837
304 Ga0496102_0126513
305 Ga0496103_0007369
306 Ga0496104_0004599
307 Ga0496104_0043870
308 Ga0496104_0067958
309 Ga0496104_0203325
310 Ga0496104_0235998
311 Ga0496105_0077394
312 Ga0496106_0160256
313 Ga0496106_0240665
314 Ga0496107_0291660
315 Ga0496108_0009456
316 Ga0496108_0132071
317 Ga0496109_0289602
318 Ga0496109_0514478
319 Ga0496110_0025906
320 Ga0496110_0192983
321 Ga0496111_0056335
322 Ga0496113_0061754
323 Ga0496114_0013586
324 Ga0496114_0143416
325 Ga0496114_0185176
326 Ga0496114_0263650
327 Ga0496114_0264825
328 Ga0496126_0145312
329 Ga0501031_0002516
330 Ga0501031_0196504
331 Ga0501036_0085665
332 Ga0501036_0086096
333 Ga0501038_0028363
334 Ga0501039_0297558
335 Ga0501040_0002469
336 Ga0501041_0018743
337 Ga0501042_0003898
338 Ga0501046_0009843
339 Ga0501048_0034149
340 Ga0501048_0131510
341 Ga0501068_0024501
342 Ga0501069_0074781
343 Ga0501071_0004426
344 Ga0501073_0118103
345 Ga0501074_0012890
346 Ga0501075_0053143
347 Ga0501076_0013834
348 Ga0501077_0039994
349 Ga0501080_0035668
350 Ga0501081_0058926
351 Ga0501081_0491321
352 Ga0501035_0063018
353 Ga0501045_0003276
354 Ga0500616_0004554
355 Ga0501084_0001627
356 Ga0587101_005498
357 Ga0501082_0022929
358 Ga0530510_0029135
359 2644138043
360 2644610362
361 2808872821
362 2812371752
363 2819424954
364 2819667328
365 2819690648
366 2819728043
367 2919449141
368 3001892237

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF16363

GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

28

148

0.88

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

5

232

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
4ivm-assembly1.cif.gz_B structure of human protoporphyrinogen ix oxidase(r59g) 0.8435 3 36
4yrb-assembly3.cif.gz_E mouse tdh mutant r180k with nad+ bound 0.8353 3 232
2yrx-assembly1.cif.gz_A crystal structure of gar synthetase from geobacillus kaustophilus 0.8279 3 75
4yrb-assembly1.cif.gz_A mouse tdh mutant r180k with nad+ bound 0.8208 3 232
4yrb-assembly2.cif.gz_D mouse tdh mutant r180k with nad+ bound 0.8195 3 308
ID Description Score Start End Superfamily
af_P9WKT3_23_337_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9669 3 311 3.40.50.720
af_P9WKT3_23_337_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9459 3 311 3.40.50.720
4zrnB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8527 4 230 3.40.50.720
2pk3B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8519 4 230 3.40.50.720
4zrnB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8408 4 230 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A7Y5WGH4-F1-model_v4 NAD-dependent epimerase/dehydratase family protein 0.9741 1 319
AF-A0A2G6DX31-F1-model_v4 Epimerase 0.9741 1 313
AF-A0A062X2N8-F1-model_v4 Nucleoside-diphosphate-sugar epimerase (EC 5.1.3.2) 0.9708 2 318 GO:0003978
AF-A0A4U6QG18-F1-model_v4 NAD-dependent epimerase/dehydratase family protein 0.9708 1 319
AF-A0A2P6G3T1-F1-model_v4 Epimerase 0.9677 1 313

Map